ClCG02G000420 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G000420
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	NAC domain-containing protein, putative
Location	CG_Chr02 : 485076 .. 487461 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCCATTAGTGGAAATAGCTTCGACTTACTGCCTCCTGGTCTCAGATTCTGCCCAACAGATGAAGATCTTGTGCTTCACTTTCTCTATCACAAAGCTTCTATCTCTTCTACTCACAATTTTTCCAATTCCATCATTCCTCAGCTTCAACTTCATCTCTATAACCCTTGGCAATTCCATGGTATAATTTAATATCTCTCTCTCCATGGTATAATTTAATATCTCTCTCTCCTTTTTCTTCTCCCTTCAAATTTACCCTAAAACATTTTGGATCTAGTGTGTGAACAATAATATCTTTTCCTCTACCGTGAATATTAATTTTCCACAAGTTAAAAAACTTGGCTAAGTGAATTAGTTTCTATTCTGCACTCACGCACTTGTTATACTTAAAAAAAAAAAAAAAAAAAAAAATTAAAATTCTAAAATTGATATTTAAAAATAAATATAGAAACTATTGTGATTAATCAAATAAATATTCACGAGATATATAAATTAAAATAGAAAAATCACCACAAAAAATGTAGATTGGTAAGAAATGTTGACTTTGTTTTAGAAAAAAAACCATTTTTAACTGGAATTATCCACAAAACAAAAAAGAAGGTGTGAGATAATAATTCAAGAGAAGAAAGCCTCTTTAAAAGACTCTANACTATCTTTTTGGTCCTTAAGTTTTGAGTTTAGTTTAAGTTTTAAAATGTAATCCTTAGGTTTAGAGTTTTATTTCAATATAATTTGGTCCCAAGTAAAATGTTTCAATTTGGTTCTTGAGTTTTAAGATTTTATACTTTTAATCTTGATTTTTTACTAAATATATACTCACTTTCATAGTTTACTGTTAATATCTATTAATTAATTTAAAAAATCTAAAAGAATTATAATTAATTAAATTTCACTATTTTTCTATCCATATGAAAATTATTTTTAAAATTTCACTTCATAACTAGCTATTTGAAATTAGGTGATAGAAATTAACGCCAAGATTGAAATGAAGAGTAGTGTGAAAAATGGAAATTAGAAAATATAAATCTTGAAATTTTAGAGACCAAATTGAAACAAAAATCTCAAAACATACCACTAATTTTTTTTTTTTTTTTTGTTGGGACAGGGAAAGCACTTTCAAATGGGGAGATTCACTACTTTTTCAGCAAAGTGGGAGAAAGTAGAGCAACAGAGAGTGGATATTGGAAAGATGTTTCAATGGATGAGAAAATATTGTGCAGTGGCAATGGAAATGAAGTGGGAATAAAAAAGTATCATATTTTCTTTGTTGGTGAAGAAGATGACTCATCAACTGCCATTCAAACAAGTTGGGTCATGCATGAGTATCACATCTATACCTACCTTTTCAACAACTGCAATCCATCACATACAAAATCAGTAAGTCAAACAACTTAATTACCTTTTAACACTCTTTTTCAATAATAATCTTTGTTTCTCTTTACTTCAACTATATATATATTTTATTAGTAGCTAACGCTAGGTTGTTGAATTCAAACCTAATAAACATCTATTAGTATCTATCACATCTATTAGTGATAGACACTAATAGATGTTTATCAATGTCTATCGTTATTTACCACTGATAGACAGTAACACTTTGCTATATATTTGTAAATATTTCTAGTAGTTTTGTCATTTAAAACAATTATCCTAATATAAAATTAACACAAATAACTAAAAGTGGTCATTACTTAAATCTCAAAAGTAAAAATGTAGAATCGTGTAACAAATCATGTAGAAACAAAACTCAAAATTTAAAGATAAAAATTATAGATAAAAATATAATATTTCGAAATTTATGGGGCACATGAAATCATTATCAAAACTCAAGGGAAAAAAAGGTATTTTACTTCTTTTTAATCTTTCTTATTTAATTTCTTTACTTTAAAAGAAATGAGGAGTATGTCTGGTGACCCTTTCTTATTTCTTGTTTTCCAAAGTAAAAGTAGAAAGGTGTTTATAAGTATTTTTGAAATTGGAAATAAATAATTAAAGTCTATTCTAATAATTTGTTGGTTAATAGTTAAACCATCAAATTTGGCCTAAAAGGTAATTTATAAATTACATTAGAATATGTCAAACAAAGGTTGGAACATTATAATGTATAAAAATGAAACTAATGAGAAAAAGAAAATTAGAAAATGAATTTATGTATAATGATATGTTAGTTTATCTGCAGTAAAAATAGTTAGAGAGTAAATTAGTTGTATTTAATTTATTGTTGCGATTTGAACAGGAGTTTGGATTATGGGTTCTGTGTCGAGTTTTTGAAGCAAAAGACAATACTGGAAGAAGTATGTTTAATTACGAGGAAGATGGTGATAATGAAAGTGAACTTTCATATTTGGATGAAATGTATTTGACAATATTAGAGGATATTTGA

mRNA sequence

ATGGAAGCCATTAGTGGAAATAGCTTCGACTTACTGCCTCCTGGTCTCAGATTCTGCCCAACAGATGAAGATCTTGTGCTTCACTTTCTCTATCACAAAGCTTCTATCTCTTCTACTCACAATTTTTCCAATTCCATCATTCCTCAGCTTCAACTTCATCTCTATAACCCTTGGCAATTCCATGTGGGAGAAAGTAGAGCAACAGAGAGTGGATATTGGAAAGATGTTTCAATGGATGAGAAAATATTGTGCAGTGGCAATGGAAATGAAGTGGGAATAAAAAAGTATCATATTTTCTTTGTTGGTGAAGAAGATGACTCATCAACTGCCATTCAAACAAGTTGGGTCATGCATGAGTATCACATCTATACCTACCTTTTCAACAACTGCAATCCATCACATACAAAATCAGAGTTTGGATTATGGGTTCTGTGTCGAGTTTTTGAAGCAAAAGACAATACTGGAAGAAGTATGTTTAATTACGAGGAAGATGGTGATAATGAAAGTGAACTTTCATATTTGGATGAAATGTATTTGACAATATTAGAGGATATTTGA

Coding sequence (CDS)

ATGGAAGCCATTAGTGGAAATAGCTTCGACTTACTGCCTCCTGGTCTCAGATTCTGCCCAACAGATGAAGATCTTGTGCTTCACTTTCTCTATCACAAAGCTTCTATCTCTTCTACTCACAATTTTTCCAATTCCATCATTCCTCAGCTTCAACTTCATCTCTATAACCCTTGGCAATTCCATGTGGGAGAAAGTAGAGCAACAGAGAGTGGATATTGGAAAGATGTTTCAATGGATGAGAAAATATTGTGCAGTGGCAATGGAAATGAAGTGGGAATAAAAAAGTATCATATTTTCTTTGTTGGTGAAGAAGATGACTCATCAACTGCCATTCAAACAAGTTGGGTCATGCATGAGTATCACATCTATACCTACCTTTTCAACAACTGCAATCCATCACATACAAAATCAGAGTTTGGATTATGGGTTCTGTGTCGAGTTTTTGAAGCAAAAGACAATACTGGAAGAAGTATGTTTAATTACGAGGAAGATGGTGATAATGAAAGTGAACTTTCATATTTGGATGAAATGTATTTGACAATATTAGAGGATATTTGA

Protein sequence

MEAISGNSFDLLPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPWQFHVGESRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSSTAIQTSWVMHEYHIYTYLFNNCNPSHTKSEFGLWVLCRVFEAKDNTGRSMFNYEEDGDNESELSYLDEMYLTILEDI

Homology

[Close]

BLAST of ClCG02G000420 vs. Swiss-Prot
Match: NC104_ARATH (NAC domain-containing protein 104 OS=Arabidopsis thaliana GN=NAC104 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.7e-25
Identity = 70/194 (36.08%), Postives = 100/194 (51.55%), Query Frame = 1


Query: 12  LPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPWQF---HVGE---- 71
           LPPG RF PTDE+LV+HFL+ KAS+   H     +IP L L+ Y+PW      +GE    
Sbjct: 3   LPPGFRFFPTDEELVVHFLHRKASLLPCH---PDVIPDLDLYHYDPWDLPGKALGEGRQW 62

Query: 72  --------SRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSSTAIQTSWV 131
                    R T +GYW  + MDE I  S    +VGIKKY  F++G+        QT+W+
Sbjct: 63  YFYSRKTQERVTSNGYWGSMGMDEPIYTSSTHKKVGIKKYLTFYLGDS-------QTNWI 122

Query: 132 MHEYHI---------YTYLFNNCNPSHTKSEFGLWVLCRVFEAKDNTGRSMFNYEEDGDN 182
           M EY +          +   +  + S  K ++  WV+CRV+E   +        EE+ D+
Sbjct: 123 MQEYSLPDSSSSSSRSSKRSSRASSSSHKPDYSKWVICRVYEQNCS--------EEEDDD 178

[Close]

BLAST of ClCG02G000420 vs. Swiss-Prot
Match: NAC56_ARATH (NAC transcription factor 56 OS=Arabidopsis thaliana GN=NAC056 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.2e-18
Identity = 60/199 (30.15%), Postives = 95/199 (47.74%), Query Frame = 1


Query: 12  LPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPWQFHVGES------ 71
           LPPG RF PTDE+LV+H+L  KA+ +       +II ++ L+ ++PW+     S      
Sbjct: 17  LPPGFRFHPTDEELVVHYLKRKAASAP---LPVAIIAEVDLYKFDPWELPAKASFGEQEW 76

Query: 72  -----------------RATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSS 131
                            RA  SGYWK    D+ +L S    +VG+KK  +F+ G+     
Sbjct: 77  YFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVKKALVFYSGK---PP 136

Query: 132 TAIQTSWVMHEYHIYTYLFNN----CNPSHTKSEFGL--WVLCRVFEAKDNTGRSMFNYE 182
             +++ W+MHEY +     NN    C+  + K+   L  WVLCR+++ K+N  R +    
Sbjct: 137 KGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYK-KNNASRHV---- 196

[Close]

BLAST of ClCG02G000420 vs. Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 4.6e-17
Identity = 62/204 (30.39%), Postives = 94/204 (46.08%), Query Frame = 1


Query: 12  LPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPW----QFHVGE--- 71
           LPPG RF PTDE+L++ +L  KA   + H+FS  +I ++ L+ ++PW    +   GE   
Sbjct: 14  LPPGFRFYPTDEELMVEYLCRKA---AGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEW 73

Query: 72  ----------------SRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSS 131
                           +R   SGYWK    D+ I  S  G  VGIKK  +F++G+   + 
Sbjct: 74  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVI--STEGRRVGIKKALVFYIGK---AP 133

Query: 132 TAIQTSWVMHEYHIYTYLFNNCNPSHTKSEFGL--WVLCRVFEAKDNTGRSMFNY----- 186
              +T+W+MHEY +         PS       L  WVLCR+++ + +  +  +N      
Sbjct: 134 KGTKTNWIMHEYRL-------IEPSRRNGSTKLDDWVLCRIYKKQTSAQKQAYNNLMTSG 193

[Close]

BLAST of ClCG02G000420 vs. Swiss-Prot
Match: NAC83_ARATH (NAC domain-containing protein 83 OS=Arabidopsis thaliana GN=NAC083 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 7.9e-17
Identity = 59/178 (33.15%), Postives = 85/178 (47.75%), Query Frame = 1


Query: 12  LPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPWQ-----------F 71
           LPPG RF PTDE+LV+ +L  K   S       SIIP+  +   +PW            F
Sbjct: 14  LPPGFRFHPTDEELVVQYLKRKVCSSP---LPASIIPEFDVCRADPWDLPGNLEKERYFF 73

Query: 72  HVGE---------SRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSSTAI 131
              E         +RAT SGYWK   +D++++ S     VG+KK  +F+ G+    S   
Sbjct: 74  STREAKYPNGNRSNRATGSGYWKATGIDKRVVTSRGNQIVGLKKTLVFYKGKPPHGS--- 133

Query: 132 QTSWVMHEYHIYTYLFNNCNPSHTKSEFGLWVLCRVFEAKDNTGRSMFNYEEDGDNES 170
           +T W+MHEY + +   ++  P+        WVLCR+F  K   G    N ++DGD+ +
Sbjct: 134 RTDWIMHEYRLSSSPPSSMGPTQN------WVLCRIF-LKKRAGNK--NDDDDGDSRN 176

[Close]

BLAST of ClCG02G000420 vs. Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 3.0e-16
Identity = 56/197 (28.43%), Postives = 91/197 (46.19%), Query Frame = 1


Query: 12  LPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPWQFH----VGE--- 71
           LPPG RF PTDE+L++ +L  K    + ++FS  +I  + L+ ++PW        GE   
Sbjct: 14  LPPGFRFYPTDEELLVQYLCRKV---AGYHFSLQVIGDIDLYKFDPWDLPSKALFGEKEW 73

Query: 72  ----------------SRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSS 131
                           +R   SGYWK    D+  + + +G  VGIKK  +F+ G+   + 
Sbjct: 74  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDK--IITADGRRVGIKKALVFYAGK---AP 133

Query: 132 TAIQTSWVMHEYHIYTYLFNNCNPSHTKSEFGLWVLCRVFEAKDNTGRSMF--------N 178
              +T+W+MHEY +  +     + SH  S+   WVLCR+++    + R            
Sbjct: 134 KGTKTNWIMHEYRLIEH-----SRSHGSSKLDDWVLCRIYKKTSGSQRQAVTPVQACREE 193

[Close]

BLAST of ClCG02G000420 vs. TrEMBL
Match: A0A0A0LME0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G334550 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 6.8e-68
Identity = 148/217 (68.20%), Postives = 159/217 (73.27%), Query Frame = 1


Query: 4   ISGN-SFDLLPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSII-PQLQLHLYNPWQFH 63
           ISGN S +LLPPGLRFCPTDEDLVLHFLYHKA+  S H FSNSII P LQLHLYNPWQFH
Sbjct: 12  ISGNNSLNLLPPGLRFCPTDEDLVLHFLYHKAN--SHHRFSNSIIIPHLQLHLYNPWQFH 71

Query: 64  ---------------VGESRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVG---E 123
                          VGESRATESGYWKDV MDE I C  NG+EVGIKKYHIFFVG   E
Sbjct: 72  GKTLSNGDIHYFFSRVGESRATESGYWKDVLMDEPIFCGANGDEVGIKKYHIFFVGDQEE 131

Query: 124 EDDSSTAIQTSWVMHEYHIYTYLF-----------NNCNPSHTKSEFGLWVLCRVFEAKD 183
           +D+S T IQTSWVM EYHIY YL            NN N S TKSEFG+WV+CRVFEAK+
Sbjct: 132 DDESPTPIQTSWVMQEYHIYNYLLNTHDHTHPSQNNNNNLSQTKSEFGIWVVCRVFEAKE 191

Query: 184 NT---GRSMFNYEE-DGDNESELSYLDEMYLTILEDI 186
           N    GRSMF YEE D D+ESELSYLDEMYL+ L+DI
Sbjct: 192 NNNIIGRSMFCYEEDDDDDESELSYLDEMYLS-LDDI 225

[Close]

BLAST of ClCG02G000420 vs. TrEMBL
Match: A0A0M4FLP9_MANES (NAC transcription factors 38 OS=Manihot esculenta PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.7e-31
Identity = 77/199 (38.69%), Postives = 122/199 (61.31%), Query Frame = 1


Query: 12  LPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPWQFH---------- 71
           LPPG RFCPTD++L+LHFLY KAS+  +H+    IIP   LH  +PW  H          
Sbjct: 9   LPPGFRFCPTDQELILHFLYRKASLLPSHD----IIP--DLHPLDPWNLHGKALSSGNHW 68

Query: 72  ---------VGESRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSSTAIQ 131
                      + + TE+G WK + + +K + S +GN++GIK Y ++++G+     TAI+
Sbjct: 69  YFFTQMMEFESQQQVTENGVWKKLDV-QKPIFSDSGNKIGIKNYLVYYIGQ---PPTAIE 128

Query: 132 TSWVMHEYHIYTYLFNNCNPSH-TKSEFGLWVLCRVFEAKDNTGRSM-----FNYEEDGD 186
           T+W+MH+YH    L N+ +P    KS++  WVLCRV+++ +N+G+S+        E+D D
Sbjct: 129 TNWIMHQYH----LCNSSSPKRIRKSDYHKWVLCRVYQSVENSGKSLNCRDDDEDEDDDD 188

[Close]

BLAST of ClCG02G000420 vs. TrEMBL
Match: A0A060A5Q6_BOENI (NAC domain-containing protein OS=Boehmeria nivea GN=NAC30 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-29
Identity = 85/210 (40.48%), Postives = 113/210 (53.81%), Query Frame = 1


Query: 8   SFDLLPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPWQFH------ 67
           S+  LPPG RFCPTDE+LVLHFLY KA +   H    +IIP + L L+NPW F+      
Sbjct: 6   SYVNLPPGFRFCPTDEELVLHFLYPKAFLLPCH---PNIIPDIDLQLHNPWDFNGSIALS 65

Query: 68  -----------VGESRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSSTA 127
                        + R T +GYWKD+  DE I+ S  GN+VG+KK  +F VG E +S  +
Sbjct: 66  SGNMYYFFSKVTDQYRVTANGYWKDLDKDEAIVAS--GNQVGVKKCLVFCVGGE-ESPVS 125

Query: 128 IQTSWVMHEY-----HIYTYLFNNCNPS--------HTKSEFGLWVLCRVFEAK---DNT 185
            +T WVM E+     +I  Y  ++ N S          K     WVLCRV E K    N 
Sbjct: 126 TETDWVMEEFSLICNNIINYGLSSTNNSTAPAYKRRRKKKSDCKWVLCRVHERKGSTSNA 185

[Close]

BLAST of ClCG02G000420 vs. TrEMBL
Match: A0A0L9VH66_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g267800 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.4e-28
Identity = 74/192 (38.54%), Postives = 112/192 (58.33%), Query Frame = 1


Query: 12  LPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPWQFHVG-------- 71
           LPPG RF PTDE+L++HFL+ KAS+   H     +IP L+L+ Y+PW+ H          
Sbjct: 8   LPPGFRFYPTDEELIVHFLHRKASLLPCHP---DVIPDLELYQYDPWELHGRALAEGNQW 67

Query: 72  -------ESRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSSTAIQTSWV 131
                  ++R T +GYWK   M+E ++ S N   VG+KKY +F VGE+   +TAI+T+W+
Sbjct: 68  YYYSRRTQNRVTGNGYWKPTGMEEPVVSSSNSKRVGMKKYFVFHVGED---ATAIKTNWI 127

Query: 132 MHEYHI---YTYLFNNCNPSHTKSEFGLWVLCRVFEAKDNTGRSMFNYEEDGDNESELSY 186
           M EY +    +   ++      KS++  WV+CRV+E          N EE  DN +ELS 
Sbjct: 128 MQEYRLSDSASSTRSSKRKPQPKSDYNKWVICRVYER---------NGEE--DNGTELSC 182

[Close]

BLAST of ClCG02G000420 vs. TrEMBL
Match: A0A0S3S1Y9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G015700 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.4e-28
Identity = 74/192 (38.54%), Postives = 112/192 (58.33%), Query Frame = 1


Query: 12  LPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPWQFHVG-------- 71
           LPPG RF PTDE+L++HFL+ KAS+   H     +IP L+L+ Y+PW+ H          
Sbjct: 8   LPPGFRFYPTDEELIVHFLHRKASLLPCHP---DVIPDLELYQYDPWELHGRALAEGNQW 67

Query: 72  -------ESRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSSTAIQTSWV 131
                  ++R T +GYWK   M+E ++ S N   VG+KKY +F VGE+   +TAI+T+W+
Sbjct: 68  YYYSRRTQNRVTGNGYWKPTGMEEPVVSSSNSKRVGMKKYFVFHVGED---ATAIKTNWI 127

Query: 132 MHEYHI---YTYLFNNCNPSHTKSEFGLWVLCRVFEAKDNTGRSMFNYEEDGDNESELSY 186
           M EY +    +   ++      KS++  WV+CRV+E          N EE  DN +ELS 
Sbjct: 128 MQEYRLSDSASSTRSSKRKPQPKSDYNKWVICRVYER---------NGEE--DNGTELSC 182

[Close]

BLAST of ClCG02G000420 vs. TAIR10
Match: AT5G64530.1 (AT5G64530.1 xylem NAC domain 1)

HSP 1 Score: 116.7 bits (291), Expect = 1.5e-26
Identity = 70/194 (36.08%), Postives = 100/194 (51.55%), Query Frame = 1


Query: 12  LPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPWQF---HVGE---- 71
           LPPG RF PTDE+LV+HFL+ KAS+   H     +IP L L+ Y+PW      +GE    
Sbjct: 3   LPPGFRFFPTDEELVVHFLHRKASLLPCH---PDVIPDLDLYHYDPWDLPGKALGEGRQW 62

Query: 72  --------SRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSSTAIQTSWV 131
                    R T +GYW  + MDE I  S    +VGIKKY  F++G+        QT+W+
Sbjct: 63  YFYSRKTQERVTSNGYWGSMGMDEPIYTSSTHKKVGIKKYLTFYLGDS-------QTNWI 122

Query: 132 MHEYHI---------YTYLFNNCNPSHTKSEFGLWVLCRVFEAKDNTGRSMFNYEEDGDN 182
           M EY +          +   +  + S  K ++  WV+CRV+E   +        EE+ D+
Sbjct: 123 MQEYSLPDSSSSSSRSSKRSSRASSSSHKPDYSKWVICRVYEQNCS--------EEEDDD 178

[Close]

BLAST of ClCG02G000420 vs. TAIR10
Match: AT3G15510.1 (AT3G15510.1 NAC domain containing protein 2)

HSP 1 Score: 93.2 bits (230), Expect = 1.8e-19
Identity = 60/199 (30.15%), Postives = 95/199 (47.74%), Query Frame = 1


Query: 12  LPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPWQFHVGES------ 71
           LPPG RF PTDE+LV+H+L  KA+ +       +II ++ L+ ++PW+     S      
Sbjct: 17  LPPGFRFHPTDEELVVHYLKRKAASAP---LPVAIIAEVDLYKFDPWELPAKASFGEQEW 76

Query: 72  -----------------RATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSS 131
                            RA  SGYWK    D+ +L S    +VG+KK  +F+ G+     
Sbjct: 77  YFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLASDGNQKVGVKKALVFYSGK---PP 136

Query: 132 TAIQTSWVMHEYHIYTYLFNN----CNPSHTKSEFGL--WVLCRVFEAKDNTGRSMFNYE 182
             +++ W+MHEY +     NN    C+  + K+   L  WVLCR+++ K+N  R +    
Sbjct: 137 KGVKSDWIMHEYRLIENKPNNRPPGCDFGNKKNSLRLDDWVLCRIYK-KNNASRHV---- 196

[Close]

BLAST of ClCG02G000420 vs. TAIR10
Match: AT3G15500.1 (AT3G15500.1 NAC domain containing protein 3)

HSP 1 Score: 89.4 bits (220), Expect = 2.6e-18
Identity = 62/204 (30.39%), Postives = 94/204 (46.08%), Query Frame = 1


Query: 12  LPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPW----QFHVGE--- 71
           LPPG RF PTDE+L++ +L  KA   + H+FS  +I ++ L+ ++PW    +   GE   
Sbjct: 14  LPPGFRFYPTDEELMVEYLCRKA---AGHDFSLQLIAEIDLYKFDPWVLPSKALFGEKEW 73

Query: 72  ----------------SRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSS 131
                           +R   SGYWK    D+ I  S  G  VGIKK  +F++G+   + 
Sbjct: 74  YFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVI--STEGRRVGIKKALVFYIGK---AP 133

Query: 132 TAIQTSWVMHEYHIYTYLFNNCNPSHTKSEFGL--WVLCRVFEAKDNTGRSMFNY----- 186
              +T+W+MHEY +         PS       L  WVLCR+++ + +  +  +N      
Sbjct: 134 KGTKTNWIMHEYRL-------IEPSRRNGSTKLDDWVLCRIYKKQTSAQKQAYNNLMTSG 193

[Close]

BLAST of ClCG02G000420 vs. TAIR10
Match: AT5G13180.1 (AT5G13180.1 NAC domain containing protein 83)

HSP 1 Score: 88.6 bits (218), Expect = 4.4e-18
Identity = 59/178 (33.15%), Postives = 85/178 (47.75%), Query Frame = 1


Query: 12  LPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPWQ-----------F 71
           LPPG RF PTDE+LV+ +L  K   S       SIIP+  +   +PW            F
Sbjct: 14  LPPGFRFHPTDEELVVQYLKRKVCSSP---LPASIIPEFDVCRADPWDLPGNLEKERYFF 73

Query: 72  HVGE---------SRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSSTAI 131
              E         +RAT SGYWK   +D++++ S     VG+KK  +F+ G+    S   
Sbjct: 74  STREAKYPNGNRSNRATGSGYWKATGIDKRVVTSRGNQIVGLKKTLVFYKGKPPHGS--- 133

Query: 132 QTSWVMHEYHIYTYLFNNCNPSHTKSEFGLWVLCRVFEAKDNTGRSMFNYEEDGDNES 170
           +T W+MHEY + +   ++  P+        WVLCR+F  K   G    N ++DGD+ +
Sbjct: 134 RTDWIMHEYRLSSSPPSSMGPTQN------WVLCRIF-LKKRAGNK--NDDDDGDSRN 176

[Close]

BLAST of ClCG02G000420 vs. TAIR10
Match: AT1G52880.1 (AT1G52880.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 84.3 bits (207), Expect = 8.4e-17
Identity = 53/171 (30.99%), Postives = 85/171 (49.71%), Query Frame = 1


Query: 12  LPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPWQF----HVGE--- 71
           LPPG RF PTDE+LV+H+L  KA    +     +II  + L+ ++PW+       GE   
Sbjct: 17  LPPGFRFHPTDEELVIHYLKRKA---DSVPLPVAIIADVDLYKFDPWELPAKASFGEQEW 76

Query: 72  ----------------SRATESGYWKDVSMDEKILCSGNG--NEVGIKKYHIFFVGEEDD 131
                           +RA  SGYWK    D+ ++ +G G   +VG+KK  +F+ G+   
Sbjct: 77  YFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGK--- 136

Query: 132 SSTAIQTSWVMHEYHIYTYLFNN-CNPSHTKSEFGL--WVLCRVFEAKDNT 155
               +++ W+MHEY +      + C+  + K+   L  WVLCR+++  ++T
Sbjct: 137 PPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNST 181

[Close]

BLAST of ClCG02G000420 vs. NCBI nr
Match: gi|659121925|ref|XP_008460884.1| (PREDICTED: NAC transcription factor 25-like isoform X1 [Cucumis melo])

HSP 1 Score: 266.5 bits (680), Expect = 3.4e-68
Identity = 147/219 (67.12%), Postives = 161/219 (73.52%), Query Frame = 1


Query: 4   ISGN-SFDLLPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSII-PQLQLHLYNPWQFH 63
           ISGN S +LLPPGLRFCPTDEDLVLHFLYHKA+  S H+FSNSII P LQLHLYNPWQFH
Sbjct: 6   ISGNNSLNLLPPGLRFCPTDEDLVLHFLYHKAN--SHHHFSNSIIIPHLQLHLYNPWQFH 65

Query: 64  ----------------VGESRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVG--- 123
                           VGESRATESGYWKDV MDE I CS NG+EVGIKKYHIFF G   
Sbjct: 66  GKTLSNGDNIHYFFSRVGESRATESGYWKDVLMDEPIFCSANGDEVGIKKYHIFFAGDQE 125

Query: 124 EEDDSSTAIQTSWVMHEYHIYTYLFNNCNPSH-----------TKSEFGLWVLCRVFEAK 183
           E+D+S + IQTSW+M EYHIY YL NN + +H           TKSEFGLWV+CRVFEAK
Sbjct: 126 EDDESPSPIQTSWIMQEYHIYNYLLNNTHHAHPSQNNNNNLSQTKSEFGLWVVCRVFEAK 185

Query: 184 DNT---GRSMFNYEE--DGDNESELSYLDEMYLTILEDI 186
           +N    GRSMF YEE  D DNESELSYLDEMYL+ L+DI
Sbjct: 186 ENNNIIGRSMFCYEEDDDDDNESELSYLDEMYLS-LDDI 221

[Close]

BLAST of ClCG02G000420 vs. NCBI nr
Match: gi|449459228|ref|XP_004147348.1| (PREDICTED: NAC transcription factor 29-like [Cucumis sativus])

HSP 1 Score: 265.0 bits (676), Expect = 9.8e-68
Identity = 148/217 (68.20%), Postives = 159/217 (73.27%), Query Frame = 1


Query: 4   ISGN-SFDLLPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSII-PQLQLHLYNPWQFH 63
           ISGN S +LLPPGLRFCPTDEDLVLHFLYHKA+  S H FSNSII P LQLHLYNPWQFH
Sbjct: 12  ISGNNSLNLLPPGLRFCPTDEDLVLHFLYHKAN--SHHRFSNSIIIPHLQLHLYNPWQFH 71

Query: 64  ---------------VGESRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVG---E 123
                          VGESRATESGYWKDV MDE I C  NG+EVGIKKYHIFFVG   E
Sbjct: 72  GKTLSNGDIHYFFSRVGESRATESGYWKDVLMDEPIFCGANGDEVGIKKYHIFFVGDQEE 131

Query: 124 EDDSSTAIQTSWVMHEYHIYTYLF-----------NNCNPSHTKSEFGLWVLCRVFEAKD 183
           +D+S T IQTSWVM EYHIY YL            NN N S TKSEFG+WV+CRVFEAK+
Sbjct: 132 DDESPTPIQTSWVMQEYHIYNYLLNTHDHTHPSQNNNNNLSQTKSEFGIWVVCRVFEAKE 191

Query: 184 NT---GRSMFNYEE-DGDNESELSYLDEMYLTILEDI 186
           N    GRSMF YEE D D+ESELSYLDEMYL+ L+DI
Sbjct: 192 NNNIIGRSMFCYEEDDDDDESELSYLDEMYLS-LDDI 225

[Close]

BLAST of ClCG02G000420 vs. NCBI nr
Match: gi|659121927|ref|XP_008460885.1| (PREDICTED: NAC transcription factor 25-like isoform X2 [Cucumis melo])

HSP 1 Score: 201.1 bits (510), Expect = 1.7e-48
Identity = 104/152 (68.42%), Postives = 114/152 (75.00%), Query Frame = 1


Query: 4   ISGN-SFDLLPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSII-PQLQLHLYNPWQFH 63
           ISGN S +LLPPGLRFCPTDEDLVLHFLYHKA+  S H+FSNSII P LQLHLYNPWQFH
Sbjct: 6   ISGNNSLNLLPPGLRFCPTDEDLVLHFLYHKAN--SHHHFSNSIIIPHLQLHLYNPWQFH 65

Query: 64  ----------------VGESRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVG--- 123
                           VGESRATESGYWKDV MDE I CS NG+EVGIKKYHIFF G   
Sbjct: 66  GKTLSNGDNIHYFFSRVGESRATESGYWKDVLMDEPIFCSANGDEVGIKKYHIFFAGDQE 125

Query: 124 EEDDSSTAIQTSWVMHEYHIYTYLFNNCNPSH 135
           E+D+S + IQTSW+M EYHIY YL NN + +H
Sbjct: 126 EDDESPSPIQTSWIMQEYHIYNYLLNNTHHAH 155

[Close]

BLAST of ClCG02G000420 vs. NCBI nr
Match: gi|925170197|gb|ALC79015.1| (NAC transcription factors 38 [Manihot esculenta])

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-30
Identity = 77/199 (38.69%), Postives = 122/199 (61.31%), Query Frame = 1


Query: 12  LPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPWQFH---------- 71
           LPPG RFCPTD++L+LHFLY KAS+  +H+    IIP   LH  +PW  H          
Sbjct: 9   LPPGFRFCPTDQELILHFLYRKASLLPSHD----IIP--DLHPLDPWNLHGKALSSGNHW 68

Query: 72  ---------VGESRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSSTAIQ 131
                      + + TE+G WK + + +K + S +GN++GIK Y ++++G+     TAI+
Sbjct: 69  YFFTQMMEFESQQQVTENGVWKKLDV-QKPIFSDSGNKIGIKNYLVYYIGQ---PPTAIE 128

Query: 132 TSWVMHEYHIYTYLFNNCNPSH-TKSEFGLWVLCRVFEAKDNTGRSM-----FNYEEDGD 186
           T+W+MH+YH    L N+ +P    KS++  WVLCRV+++ +N+G+S+        E+D D
Sbjct: 129 TNWIMHQYH----LCNSSSPKRIRKSDYHKWVLCRVYQSVENSGKSLNCRDDDEDEDDDD 188

[Close]

BLAST of ClCG02G000420 vs. NCBI nr
Match: gi|640938605|gb|AIA57534.1| (NAC domain-containing protein [Boehmeria nivea])

HSP 1 Score: 137.1 bits (344), Expect = 3.1e-29
Identity = 85/210 (40.48%), Postives = 113/210 (53.81%), Query Frame = 1


Query: 8   SFDLLPPGLRFCPTDEDLVLHFLYHKASISSTHNFSNSIIPQLQLHLYNPWQFH------ 67
           S+  LPPG RFCPTDE+LVLHFLY KA +   H    +IIP + L L+NPW F+      
Sbjct: 6   SYVNLPPGFRFCPTDEELVLHFLYPKAFLLPCH---PNIIPDIDLQLHNPWDFNGSIALS 65

Query: 68  -----------VGESRATESGYWKDVSMDEKILCSGNGNEVGIKKYHIFFVGEEDDSSTA 127
                        + R T +GYWKD+  DE I+ S  GN+VG+KK  +F VG E +S  +
Sbjct: 66  SGNMYYFFSKVTDQYRVTANGYWKDLDKDEAIVAS--GNQVGVKKCLVFCVGGE-ESPVS 125

Query: 128 IQTSWVMHEY-----HIYTYLFNNCNPS--------HTKSEFGLWVLCRVFEAK---DNT 185
            +T WVM E+     +I  Y  ++ N S          K     WVLCRV E K    N 
Sbjct: 126 TETDWVMEEFSLICNNIINYGLSSTNNSTAPAYKRRRKKKSDCKWVLCRVHERKGSTSNA 185

The following BLAST results are available for this feature:

BLAST of ClCG02G000420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NC104_ARATH	2.7e-25	36.08	NAC domain-containing protein 104 OS=Arabidopsis thaliana GN=NAC104 PE=2 SV=1	[more]
NAC56_ARATH	3.2e-18	30.15	NAC transcription factor 56 OS=Arabidopsis thaliana GN=NAC056 PE=2 SV=1	[more]
NAC55_ARATH	4.6e-17	30.39	NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1	[more]
NAC83_ARATH	7.9e-17	33.15	NAC domain-containing protein 83 OS=Arabidopsis thaliana GN=NAC083 PE=1 SV=1	[more]
NAC72_ARATH	3.0e-16	28.43	NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1	[more]

BLAST of ClCG02G000420 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LME0_CUCSA	6.8e-68	68.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G334550 PE=4 SV=1	[more]
A0A0M4FLP9_MANES	8.7e-31	38.69	NAC transcription factors 38 OS=Manihot esculenta PE=2 SV=1	[more]
A0A060A5Q6_BOENI	2.1e-29	40.48	NAC domain-containing protein OS=Boehmeria nivea GN=NAC30 PE=2 SV=1	[more]
A0A0L9VH66_PHAAN	1.4e-28	38.54	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g267800 PE=4 SV=1	[more]
A0A0S3S1Y9_PHAAN	1.4e-28	38.54	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.05G015700 PE=...	[more]

BLAST of ClCG02G000420 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64530.1	1.5e-26	36.08	xylem NAC domain 1	[more]
AT3G15510.1	1.8e-19	30.15	NAC domain containing protein 2	[more]
AT3G15500.1	2.6e-18	30.39	NAC domain containing protein 3	[more]
AT5G13180.1	4.4e-18	33.15	NAC domain containing protein 83	[more]
AT1G52880.1	8.4e-17	30.99	NAC (No Apical Meristem) domain transcriptional regulator superfamil...	[more]

BLAST of ClCG02G000420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121925\|ref\|XP_008460884.1\|	3.4e-68	67.12	PREDICTED: NAC transcription factor 25-like isoform X1 [Cucumis melo]	[more]
gi\|449459228\|ref\|XP_004147348.1\|	9.8e-68	68.20	PREDICTED: NAC transcription factor 29-like [Cucumis sativus]	[more]
gi\|659121927\|ref\|XP_008460885.1\|	1.7e-48	68.42	PREDICTED: NAC transcription factor 25-like isoform X2 [Cucumis melo]	[more]
gi\|925170197\|gb\|ALC79015.1\|	1.3e-30	38.69	NAC transcription factors 38 [Manihot esculenta]	[more]
gi\|640938605\|gb\|AIA57534.1\|	3.1e-29	40.48	NAC domain-containing protein [Boehmeria nivea]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003441	NAC-dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G000420.1	ClCG02G000420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 13..122 score: 1.8
IPR003441	NAC domain	PROFILE	PS51005	NAC	coord: 12..150 score: 25
IPR003441	NAC domain	unknown	SSF101941	NAC domain	coord: 11..148 score: 1.57
None	No IPR available	PANTHER	PTHR31719	FAMILY NOT NAMED	coord: 12..185 score: 1.3
None	No IPR available	PANTHER	PTHR31719:SF20	SUBFAMILY NOT NAMED	coord: 12..185 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG02G000420	Csa2G334550	Cucumber (Chinese Long) v2	cuwcgB126
ClCG02G000420	MELO3C023230	Melon (DHL92) v3.5.1	mewcgB091
ClCG02G000420	Cla97C02G026680	Watermelon (97103) v2	wcgwmbB138
ClCG02G000420	Bhi10G001346	Wax gourd	wcgwgoB303
ClCG02G000420	CSPIUnG00770	Wild cucumber (PI 183967)	cpiwcgB096
ClCG02G000420	Cucsa.228480	Cucumber (Gy14) v1	cgywcgB401
ClCG02G000420	CmaCh02G006390	Cucurbita maxima (Rimu)	cmawcgB544
ClCG02G000420	CmoCh02G006430	Cucurbita moschata (Rifu)	cmowcgB540
ClCG02G000420	Lsi10G007440	Bottle gourd (USVL1VR-Ls)	lsiwcgB056
ClCG02G000420	Cp4.1LG05g10450	Cucurbita pepo (Zucchini)	cpewcgB647
ClCG02G000420	CsGy2G015830	Cucumber (Gy14) v2	cgybwcgB121
ClCG02G000420	MELO3C023230.2	Melon (DHL92) v3.6.1	medwcgB089
ClCG02G000420	Carg11706	Silver-seed gourd	carwcgB1030
ClCG02G000420	CsaV3_2G019430	Cucumber (Chinese Long) v3	cucwcgB139

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G000420	Cucurbita maxima (Rimu)	cmawcgB482
ClCG02G000420	Cucurbita moschata (Rifu)	cmowcgB480
ClCG02G000420	Wild cucumber (PI 183967)	cpiwcgB133
ClCG02G000420	Watermelon (97103) v1	wcgwmB206
ClCG02G000420	Cucurbita pepo (Zucchini)	cpewcgB268
ClCG02G000420	Cucurbita pepo (Zucchini)	cpewcgB274
ClCG02G000420	Silver-seed gourd	carwcgB0694