ClCG01G025110 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G025110
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
Description40S ribosomal protein S25, putative
LocationCG_Chr01 : 38223117 .. 38223509 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACTACAAACCCCCAAAAGGAAGAGAAAAGCCTACAAGAAGCTTAACAGTGCATACTCGATCCGCATTTGCTCCCTCTCTTCTCTTCTGCATCTTCCTCAGTACATCCAACTCCGGCGGTGCAACTTTGATACAATGGCGCCAAAGAAGGATAAGGCTCCTCCCCCATCTTCCAAGCCTGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAGTGGAGCAAAGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAAGGAACTTATGACAAGCTTCTAGTTGAAGTTCCCAAGTACAAGCTTGTCACTCCATCAATCTTGTCCGATAGGTTGAGGATCAATGGATCTCTTGCACGAAAAGAGCAATCAAGGATTTGA

mRNA sequence

ATGCAACTACAAACCCCCAAAAGGAAGAGAAAAGCCTACAAGAAGCTTAACAGTGCATACTCGATCCGCATTTGCTCCCTCTCTTCTCTTCTGCATCTTCCTCAGTACATCCAACTCCGGCGGTGCAACTTTGATACAATGGCGCCAAAGAAGGATAAGGCTCCTCCCCCATCTTCCAAGCCTGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAGTGGAGCAAAGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAAGGAACTTATGACAAGCTTCTAGTTGAAGTTCCCAAGTACAAGCTTGTCACTCCATCAATCTTGTCCGATAGGTTGAGGATCAATGGATCTCTTGCACGAAAAGAGCAATCAAGGATTTGA

Coding sequence (CDS)

ATGCAACTACAAACCCCCAAAAGGAAGAGAAAAGCCTACAAGAAGCTTAACAGTGCATACTCGATCCGCATTTGCTCCCTCTCTTCTCTTCTGCATCTTCCTCAGTACATCCAACTCCGGCGGTGCAACTTTGATACAATGGCGCCAAAGAAGGATAAGGCTCCTCCCCCATCTTCCAAGCCTGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAGTGGAGCAAAGGAAAGCAAAAGGAGAAGGTCAACAACATGGTTTTGTTTGATCAAGGAACTTATGACAAGCTTCTAGTTGAAGTTCCCAAGTACAAGCTTGTCACTCCATCAATCTTGTCCGATAGGTTGAGGATCAATGGATCTCTTGCACGAAAAGAGCAATCAAGGATTTGA

Protein sequence

MQLQTPKRKRKAYKKLNSAYSIRICSLSSLLHLPQYIQLRRCNFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARKEQSRI
Homology
[Close]
BLAST of ClCG01G025110 vs. Swiss-Prot
Match: RS252_ARATH (40S ribosomal protein S25-2 OS=Arabidopsis thaliana GN=RPS25B PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 1.8e-36
Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDR+RINGSLAR+
Sbjct: 61  ITPSILSDRMRINGSLARR 79

[Close]
BLAST of ClCG01G025110 vs. Swiss-Prot
Match: RS251_ARATH (40S ribosomal protein S25-1 OS=Arabidopsis thaliana GN=RPS25A PE=3 SV=3)

HSP 1 Score: 151.4 bits (381), Expect = 6.9e-36
Identity = 72/79 (91.14%), Postives = 73/79 (92.41%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKL+ E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDRLRINGSLARK
Sbjct: 61  ITPSILSDRLRINGSLARK 79

[Close]
BLAST of ClCG01G025110 vs. Swiss-Prot
Match: RS253_ARATH (40S ribosomal protein S25-3 OS=Arabidopsis thaliana GN=RPS25D PE=3 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 9.1e-36
Identity = 72/79 (91.14%), Postives = 73/79 (92.41%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDRLRINGSLAR+
Sbjct: 61  ITPSILSDRLRINGSLARR 79

[Close]
BLAST of ClCG01G025110 vs. Swiss-Prot
Match: RS254_ARATH (40S ribosomal protein S25-4 OS=Arabidopsis thaliana GN=RPS25E PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 9.1e-36
Identity = 71/79 (89.87%), Postives = 73/79 (92.41%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDR+RINGSLAR+
Sbjct: 61  ITPSILSDRMRINGSLARR 79

[Close]
BLAST of ClCG01G025110 vs. Swiss-Prot
Match: RS25_SOLLC (40S ribosomal protein S25 OS=Solanum lycopersicum GN=RPS25 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.7e-34
Identity = 70/79 (88.61%), Postives = 73/79 (92.41%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ TYDKLL E PKYKL
Sbjct: 1   MAPKKAQAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDKSTYDKLLSEAPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPS+LSDRLRI+GSLARK
Sbjct: 61  ITPSVLSDRLRISGSLARK 79

[Close]
BLAST of ClCG01G025110 vs. TrEMBL
Match: A0A0S3SDP8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G224400 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-35
Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDRLRINGSLARK
Sbjct: 61  ITPSILSDRLRINGSLARK 79

[Close]
BLAST of ClCG01G025110 vs. TrEMBL
Match: M5WJM0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013683mg PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-35
Identity = 75/79 (94.94%), Postives = 77/79 (97.47%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKL+ E PKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLIAEAPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDRLRINGSLARK
Sbjct: 61  ITPSILSDRLRINGSLARK 79

[Close]
BLAST of ClCG01G025110 vs. TrEMBL
Match: A0A0B2QZG9_GLYSO (40S ribosomal protein S25-2 OS=Glycine soja GN=glysoja_010311 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-35
Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDRLRINGSLARK
Sbjct: 61  ITPSILSDRLRINGSLARK 79

[Close]
BLAST of ClCG01G025110 vs. TrEMBL
Match: A0A0L9V7J8_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g173900 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-35
Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDRLRINGSLARK
Sbjct: 61  ITPSILSDRLRINGSLARK 79

[Close]
BLAST of ClCG01G025110 vs. TrEMBL
Match: C6SWX1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G011100 PE=2 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-35
Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEAPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDRLRINGSLARK
Sbjct: 61  ITPSILSDRLRINGSLARK 79

[Close]
BLAST of ClCG01G025110 vs. TAIR10
Match: AT2G21580.1 (AT2G21580.1 Ribosomal protein S25 family protein)

HSP 1 Score: 153.3 bits (386), Expect = 1.0e-37
Identity = 72/79 (91.14%), Postives = 74/79 (93.67%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDR+RINGSLAR+
Sbjct: 61  ITPSILSDRMRINGSLARR 79

[Close]
BLAST of ClCG01G025110 vs. TAIR10
Match: AT4G39200.1 (AT4G39200.1 Ribosomal protein S25 family protein)

HSP 1 Score: 151.0 bits (380), Expect = 5.1e-37
Identity = 71/79 (89.87%), Postives = 73/79 (92.41%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDR+RINGSLAR+
Sbjct: 61  ITPSILSDRMRINGSLARR 79

[Close]
BLAST of ClCG01G025110 vs. TAIR10
Match: AT4G34555.1 (AT4G34555.1 Ribosomal protein S25 family protein)

HSP 1 Score: 151.0 bits (380), Expect = 5.1e-37
Identity = 72/79 (91.14%), Postives = 73/79 (92.41%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDRLRINGSLAR+
Sbjct: 61  ITPSILSDRLRINGSLARR 79

[Close]
BLAST of ClCG01G025110 vs. TAIR10
Match: AT2G16360.1 (AT2G16360.1 Ribosomal protein S25 family protein)

HSP 1 Score: 95.5 bits (236), Expect = 2.6e-20
Identity = 46/56 (82.14%), Postives = 49/56 (87.50%), Query Frame = 1 

Query: 70  KKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK 126
           + +K SKGKQKEKVNNMVLFDQ TYDKL+ E PK+KL+TPSILSDRLRINGSLARK
Sbjct: 40  ESRKRSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKLITPSILSDRLRINGSLARK 95

[Close]
BLAST of ClCG01G025110 vs. NCBI nr
Match: gi|296086583|emb|CBI32218.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 163.3 bits (412), Expect = 2.8e-37
Identity = 79/94 (84.04%), Postives = 87/94 (92.55%), Query Frame = 1 

Query: 32  HLPQYIQLRRCNFDTMAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ 91
           HLP + +  R +F  MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ
Sbjct: 30  HLPPFSETPRSDF-VMAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ 89

Query: 92  GTYDKLLVEVPKYKLVTPSILSDRLRINGSLARK 126
           GTYDKLL+EVPKYKL+TPSILSDRLR+NGSLAR+
Sbjct: 90  GTYDKLLLEVPKYKLITPSILSDRLRVNGSLARQ 122

[Close]
BLAST of ClCG01G025110 vs. NCBI nr
Match: gi|659099709|ref|XP_008450738.1| (PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo])

HSP 1 Score: 160.6 bits (405), Expect = 1.8e-36
Identity = 78/79 (98.73%), Postives = 79/79 (100.00%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           VTPSILSDRLRINGSLAR+
Sbjct: 61  VTPSILSDRLRINGSLARR 79

[Close]
BLAST of ClCG01G025110 vs. NCBI nr
Match: gi|694366808|ref|XP_009361973.1| (PREDICTED: 40S ribosomal protein S25-2-like [Pyrus x bretschneideri])

HSP 1 Score: 158.3 bits (399), Expect = 9.1e-36
Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL E PKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDRLRINGSLARK
Sbjct: 61  ITPSILSDRLRINGSLARK 79

[Close]
BLAST of ClCG01G025110 vs. NCBI nr
Match: gi|659113490|ref|XP_008456601.1| (PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo])

HSP 1 Score: 158.3 bits (399), Expect = 9.1e-36
Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL EVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           VTPSILSDRLRINGSLAR+
Sbjct: 61  VTPSILSDRLRINGSLARR 79

[Close]
BLAST of ClCG01G025110 vs. NCBI nr
Match: gi|657997509|ref|XP_008391134.1| (PREDICTED: 40S ribosomal protein S25-like [Malus domestica])

HSP 1 Score: 157.9 bits (398), Expect = 1.2e-35
Identity = 76/79 (96.20%), Postives = 78/79 (98.73%), Query Frame = 1 

Query: 47  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLVEVPKYKL 106
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLL EVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 107 VTPSILSDRLRINGSLARK 126
           +TPSILSDRLRINGSLAR+
Sbjct: 61  ITPSILSDRLRINGSLARR 79

The following BLAST results are available for this feature:
BLAST of ClCG01G025110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RS252_ARATH1.8e-3691.1440S ribosomal protein S25-2 OS=Arabidopsis thaliana GN=RPS25B PE=2 SV=1[more]
RS251_ARATH6.9e-3691.1440S ribosomal protein S25-1 OS=Arabidopsis thaliana GN=RPS25A PE=3 SV=3[more]
RS253_ARATH9.1e-3691.1440S ribosomal protein S25-3 OS=Arabidopsis thaliana GN=RPS25D PE=3 SV=2[more]
RS254_ARATH9.1e-3689.8740S ribosomal protein S25-4 OS=Arabidopsis thaliana GN=RPS25E PE=2 SV=1[more]
RS25_SOLLC1.7e-3488.6140S ribosomal protein S25 OS=Solanum lycopersicum GN=RPS25 PE=3 SV=1[more]
BLAST of ClCG01G025110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0S3SDP8_PHAAN1.1e-3596.20Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.06G224400 PE=... [more]
M5WJM0_PRUPE1.1e-3594.94Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013683mg PE=4 SV=1[more]
A0A0B2QZG9_GLYSO1.1e-3596.2040S ribosomal protein S25-2 OS=Glycine soja GN=glysoja_010311 PE=4 SV=1[more]
A0A0L9V7J8_PHAAN1.1e-3596.20Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g173900 PE=4 SV=1[more]
C6SWX1_SOYBN1.1e-3596.20Uncharacterized protein OS=Glycine max GN=GLYMA_04G011100 PE=2 SV=1[more]
BLAST of ClCG01G025110 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G21580.11.0e-3791.14 Ribosomal protein S25 family protein[more]
AT4G39200.15.1e-3789.87 Ribosomal protein S25 family protein[more]
AT4G34555.15.1e-3791.14 Ribosomal protein S25 family protein[more]
AT2G16360.12.6e-2082.14 Ribosomal protein S25 family protein[more]
BLAST of ClCG01G025110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|296086583|emb|CBI32218.3|2.8e-3784.04unnamed protein product [Vitis vinifera][more]
gi|659099709|ref|XP_008450738.1|1.8e-3698.73PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo][more]
gi|694366808|ref|XP_009361973.1|9.1e-3696.20PREDICTED: 40S ribosomal protein S25-2-like [Pyrus x bretschneideri][more]
gi|659113490|ref|XP_008456601.1|9.1e-3697.47PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo][more]
gi|657997509|ref|XP_008391134.1|1.2e-3596.20PREDICTED: 40S ribosomal protein S25-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004977Ribosomal_S25
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005840 ribosome
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G025110.1ClCG01G025110.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004977Ribosomal protein S25PRODOMPD012268coord: 86..125
score: 6.0
IPR004977Ribosomal protein S25PANTHERPTHR12850FAMILY NOT NAMEDcoord: 51..125
score: 3.6
IPR004977Ribosomal protein S25PFAMPF03297Ribosomal_S25coord: 54..125
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG01G025110Cla009825Watermelon (97103) v1wcgwmB141
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG01G025110Cucurbita pepo (Zucchini)cpewcgB027
ClCG01G025110Cucurbita pepo (Zucchini)cpewcgB062
ClCG01G025110Cucurbita pepo (Zucchini)cpewcgB425
ClCG01G025110Cucurbita pepo (Zucchini)cpewcgB450
ClCG01G025110Bottle gourd (USVL1VR-Ls)lsiwcgB127
ClCG01G025110Bottle gourd (USVL1VR-Ls)lsiwcgB170
ClCG01G025110Cucumber (Gy14) v2cgybwcgB399
ClCG01G025110Melon (DHL92) v3.6.1medwcgB510
ClCG01G025110Silver-seed gourdcarwcgB0292
ClCG01G025110Silver-seed gourdcarwcgB0414
ClCG01G025110Silver-seed gourdcarwcgB0707
ClCG01G025110Cucumber (Chinese Long) v3cucwcgB455
ClCG01G025110Watermelon (97103) v2wcgwmbB089
ClCG01G025110Watermelon (97103) v2wcgwmbB104
ClCG01G025110Wax gourdwcgwgoB224
ClCG01G025110Watermelon (Charleston Gray)wcgwcgB093
ClCG01G025110Cucumber (Gy14) v1cgywcgB022
ClCG01G025110Cucurbita maxima (Rimu)cmawcgB185
ClCG01G025110Cucurbita maxima (Rimu)cmawcgB345
ClCG01G025110Cucurbita maxima (Rimu)cmawcgB754
ClCG01G025110Cucurbita maxima (Rimu)cmawcgB576
ClCG01G025110Cucurbita moschata (Rifu)cmowcgB755
ClCG01G025110Cucurbita moschata (Rifu)cmowcgB176
ClCG01G025110Cucurbita moschata (Rifu)cmowcgB339
ClCG01G025110Cucurbita moschata (Rifu)cmowcgB573
ClCG01G025110Wild cucumber (PI 183967)cpiwcgB453
ClCG01G025110Cucumber (Chinese Long) v2cuwcgB432
ClCG01G025110Melon (DHL92) v3.5.1mewcgB515
ClCG01G025110Watermelon (97103) v1wcgwmB125