ClCG01G021170 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCATCAAATCGGGATATCAGTCGATCAACATAGCCATTGCAAATGCAGTTTCTGGGTACAATTTCAACTAGTCTAAACTGAATTAAAATTACTAAACGAACTCCATAAACATGATCGACAACTAATAAGAACTTATAAGAGCCAAAAGAAACCCGGATCTTTCTCACTGAAACACGGTTTCAGTGAAACCCCATCACAGATCCAAAGCCAGGTCGCGACCCAGATGCGAGAAACATAACCAGAAGATAAGGCGATGCAGACCCTTGAAGAACAAAGGCAAGAAAACCAAAAAGCAAAGCGAGAGTAGCCGAAAAGTATACCCAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATTTCAAGAACTGGAGCTGAGCAGCTTTGCTTTTGTTGGCAGAGTAAAAGGAGTGCTGTAGAAAGATGTCTTGAAATAGCTCAGCCCTGAGAGAAGAAGGAAAGGAAGGGAGGGAGAAGAGAGTAATAAAAATGGATTTAGCTCTGGTTCTGGTGGATTAGAAGAGAAGGAGGAGAGGTAG ATGACCATCAAATCGGGATATCAGTCGATCAACATAGCCATTGCAAATGCAGTTTCTGGATGCGAGAAACATAACCAGAAGATAAGGCGATGCAGACCCTTGAAGAACAAAGGCAAGAAAACCAAAAAGCAAAGCGAGAGTAGCCGAAAAGTATACCCAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATTTCAAGAACTGGAGCTGAGCAGCTTTGCTTTTGTTGGCAGAGTAAAAGGAGTGCTAGAAGAAGGAAAGGAAGGGAGGGAGAAGAGAGTAATAAAAATGGATTTAGCTCTGGTTCTGGTGGATTAGAAGAGAAGGAGGAGAGGTAG ATGACCATCAAATCGGGATATCAGTCGATCAACATAGCCATTGCAAATGCAGTTTCTGGATGCGAGAAACATAACCAGAAGATAAGGCGATGCAGACCCTTGAAGAACAAAGGCAAGAAAACCAAAAAGCAAAGCGAGAGTAGCCGAAAAGTATACCCAAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATTTCAAGAACTGGAGCTGAGCAGCTTTGCTTTTGTTGGCAGAGTAAAAGGAGTGCTAGAAGAAGGAAAGGAAGGGAGGGAGAAGAGAGTAATAAAAATGGATTTAGCTCTGGTTCTGGTGGATTAGAAGAGAAGGAGGAGAGGTAG MTIKSGYQSINIAIANAVSGCEKHNQKIRRCRPLKNKGKKTKKQSESSRKVYPKKKKKKKKKKKKKKISRTGAEQLCFCWQSKRSARRRKGREGEESNKNGFSSGSGGLEEKEER
BLAST of ClCG01G021170 vs. TrEMBL
Match: G4UU03_NEUT9 (Uncharacterized protein OS=Neurospora tetrasperma (strain FGSC 2509 / P0656) GN=NEUTE2DRAFT_140245 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 7.9e-06 Identity = 34/106 (32.08%), Postives = 58/106 (54.72%), Query Frame = 1
BLAST of ClCG01G021170 vs. NCBI nr
Match: gi|432102587|gb|ELK30154.1| (UPF0510 protein INM02 [Myotis davidii]) HSP 1 Score: 60.5 bits (145), Expect = 2.3e-06 Identity = 32/87 (36.78%), Postives = 50/87 (57.47%), Query Frame = 1
BLAST of ClCG01G021170 vs. NCBI nr
Match: gi|432102587|gb|ELK30154.1| (UPF0510 protein INM02 [Myotis davidii]) HSP 1 Score: 41.2 bits (95), Expect = 1.4e+00 Identity = 20/65 (30.77%), Postives = 39/65 (60.00%), Query Frame = 1
HSP 2 Score: 59.7 bits (143), Expect = 3.9e-06 Identity = 38/109 (34.86%), Postives = 55/109 (50.46%), Query Frame = 1
BLAST of ClCG01G021170 vs. NCBI nr
Match: gi|918306995|gb|KOF78889.1| (hypothetical protein OCBIM_22030170mg [Octopus bimaculoides]) HSP 1 Score: 58.5 bits (140), Expect = 8.7e-06 Identity = 36/93 (38.71%), Postives = 45/93 (48.39%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |