ClCG01G020870 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G020870
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	B-like cyclin family protein
Location	CG_Chr01 : 34895889 .. 34896356 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGATATAGCAGAAGGCGAAGACCCAGTAATCGACATCGACAGTATCGATTCCGAGAACCCGCTTGCCGTTGTTGAGTACGTGGACGATCTCTATGCACACTAAGAAAAATCGAGGTAAATATCCCTATTCTCTTGGCTTACATTTTCAAGGGACGATCCCTTCATCTTTTTCTTTACAGCTTTTTTGTGTTTGGTGCAGAATTCAAGTTGTGTTCCCCCAAATTACATGACCAAACAAACTGACATTAATGAGAAGATGAGAACTATACTAATTGACTGGCTTATAGAGGTGCATGGCAAGTTTGATCTCATGGGAGAAACTTTGCTTCTCACTGTGAATCTCAGAGACAGATTTTTGGCAGAAAAAACATTAGCGAGAAAGAAGCTTCAGCTGGTTGGTTTGGTTTCTATGCTTTTAGCTTGCAAATATGAGGAAGTTTTTGTTCCTGTTGTACATGGGTGA

mRNA sequence

ATGGAGGATATAGCAGAAGGCGAAGACCCAGTAATCGACATCGACAGTATCGATTCCGAGAACCCGCTTGCCGTTGTTGAGTACAATTCAAGTTGTGTTCCCCCAAATTACATGACCAAACAAACTGACATTAATGAGAAGATGAGAACTATACTAATTGACTGGCTTATAGAGGTGCATGGCAAGTTTGATCTCATGGGAGAAACTTTGCTTCTCACTGTGAATCTCAGAGACAGATTTTTGGCAGAAAAAACATTAGCGAGAAAGAAGCTTCAGCTGGTTGGTTTGGTTTCTATGCTTTTAGCTTGCAAATATGAGGAAGTTTTTGTTCCTGTTGTACATGGGTGA

Coding sequence (CDS)

ATGGAGGATATAGCAGAAGGCGAAGACCCAGTAATCGACATCGACAGTATCGATTCCGAGAACCCGCTTGCCGTTGTTGAGTACAATTCAAGTTGTGTTCCCCCAAATTACATGACCAAACAAACTGACATTAATGAGAAGATGAGAACTATACTAATTGACTGGCTTATAGAGGTGCATGGCAAGTTTGATCTCATGGGAGAAACTTTGCTTCTCACTGTGAATCTCAGAGACAGATTTTTGGCAGAAAAAACATTAGCGAGAAAGAAGCTTCAGCTGGTTGGTTTGGTTTCTATGCTTTTAGCTTGCAAATATGAGGAAGTTTTTGTTCCTGTTGTACATGGGTGA

Protein sequence

MEDIAEGEDPVIDIDSIDSENPLAVVEYNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEVFVPVVHG

Homology

[Close]

BLAST of ClCG01G020870 vs. Swiss-Prot
Match: CCNB1_MEDSV (G2/mitotic-specific cyclin-1 OS=Medicago sativa subsp. varia PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.1e-36
Identity = 81/125 (64.80%), Postives = 94/125 (75.20%), Query Frame = 1


Query: 1   MEDIAEGEDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEKM 60
           MEDI E  +PV+DID+ D+ +PLAV EY            ++SCV PNYM +Q DINE+M
Sbjct: 147 MEDIME--EPVMDIDTPDANDPLAVAEYIEDLYSYYRKVESTSCVSPNYMAQQFDINERM 206

Query: 61  RTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEV 114
           R IL+DWLIEVH KFDLM ETL LTVNL DRFL ++++ RKKLQLVGLV+MLLACKYEEV
Sbjct: 207 RAILVDWLIEVHDKFDLMHETLFLTVNLIDRFLEKQSVVRKKLQLVGLVAMLLACKYEEV 266

[Close]

BLAST of ClCG01G020870 vs. Swiss-Prot
Match: CCB23_ARATH (Cyclin-B2-3 OS=Arabidopsis thaliana GN=CYCB2-3 PE=2 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 1.4e-35
Identity = 78/125 (62.40%), Postives = 88/125 (70.40%), Query Frame = 1


Query: 1   MEDIAEGEDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEKM 60
           MED  + E+PVIDID+ D  NPLA VEY              SCVPPNYM  Q D+NE+M
Sbjct: 150 MEDADKEEEPVIDIDACDKNNPLAAVEYIHDMHTFYKNFEKLSCVPPNYMDNQQDLNERM 209

Query: 61  RTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEV 114
           R ILIDWLIEVH KF+LM ETL LT+N+ DRFLA   + RKKLQLVG+ ++LLACKYEEV
Sbjct: 210 RGILIDWLIEVHYKFELMEETLYLTINVIDRFLAVHQIVRKKLQLVGVTALLLACKYEEV 269

[Close]

BLAST of ClCG01G020870 vs. Swiss-Prot
Match: CCB21_ARATH (Cyclin-B2-1 OS=Arabidopsis thaliana GN=CYCB2-1 PE=1 SV=2)

HSP 1 Score: 149.1 bits (375), Expect = 3.1e-35
Identity = 78/125 (62.40%), Postives = 92/125 (73.60%), Query Frame = 1


Query: 1   MEDIAEGEDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEKM 60
           MED+   E+P++DID +DS+N LA VEY              SCVP +YM +Q D+NEKM
Sbjct: 145 MEDVTV-EEPIVDIDVLDSKNSLAAVEYVQDLYAFYRTMERFSCVPVDYMMQQIDLNEKM 204

Query: 61  RTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEV 114
           R ILIDWLIEVH KFDL+ ETL LTVNL DRFL+++ + RKKLQLVGLV++LLACKYEEV
Sbjct: 205 RAILIDWLIEVHDKFDLINETLFLTVNLIDRFLSKQNVMRKKLQLVGLVALLLACKYEEV 264

[Close]

BLAST of ClCG01G020870 vs. Swiss-Prot
Match: CCB22_ARATH (Cyclin-B2-2 OS=Arabidopsis thaliana GN=CYCB2-2 PE=1 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-34
Identity = 78/126 (61.90%), Postives = 92/126 (73.02%), Query Frame = 1


Query: 1   MEDIAEG-EDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEK 60
           MED+ E  E+PV+DID  D+ N LA VEY              SCVP +YM +Q DI++K
Sbjct: 144 MEDMEEEQEEPVLDIDEYDANNSLAAVEYVQDLYDFYRKTERFSCVPLDYMAQQFDISDK 203

Query: 61  MRTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEE 114
           MR ILIDWLIEVH KF+LM ETL LTVNL DRFL+++ +ARKKLQLVGLV++LLACKYEE
Sbjct: 204 MRAILIDWLIEVHDKFELMNETLFLTVNLIDRFLSKQAVARKKLQLVGLVALLLACKYEE 263

[Close]

BLAST of ClCG01G020870 vs. Swiss-Prot
Match: CCNB2_MEDSA (G2/mitotic-specific cyclin-2 (Fragment) OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 2.0e-34
Identity = 81/125 (64.80%), Postives = 90/125 (72.00%), Query Frame = 1


Query: 1   MEDIAEGEDPVIDIDSIDSENPLAVVEYNSS------------CVPPNYMTKQTDINEKM 60
           MEDI EGE  ++DIDS D+ N LAVVEY               CV P YM +Q D+NE+M
Sbjct: 45  MEDI-EGE-MILDIDSCDANNSLAVVEYIEDLHAYYRKIEYLGCVSPTYMDEQLDLNERM 104

Query: 61  RTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEV 114
           R IL+DWLIEVH KFDLM ETL LTVNL DRFLA++ + RKKLQLVGLV+MLLACKYEEV
Sbjct: 105 RAILVDWLIEVHDKFDLMQETLFLTVNLIDRFLAKQNVVRKKLQLVGLVAMLLACKYEEV 164

[Close]

BLAST of ClCG01G020870 vs. TrEMBL
Match: A0A0A0KJL7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G509580 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-45
Identity = 100/125 (80.00%), Postives = 103/125 (82.40%), Query Frame = 1


Query: 1   MEDIAEGEDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEKM 60
           MEDIAE EDPVIDID IDS NPLAVVEY            NSSCVPPNYMTKQ DINEKM
Sbjct: 161 MEDIAEEEDPVIDIDIIDSNNPLAVVEYVDDLYAHYRKIENSSCVPPNYMTKQVDINEKM 220

Query: 61  RTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEV 114
           R ILIDWLIEVH KFDLMGETL LTVNL DRFLA+K++ RKKLQLVGLVSMLLACKYEEV
Sbjct: 221 RAILIDWLIEVHDKFDLMGETLFLTVNLIDRFLAQKSVVRKKLQLVGLVSMLLACKYEEV 280

[Close]

BLAST of ClCG01G020870 vs. TrEMBL
Match: A0A061DL66_THECC (Cyclin B2,1 isoform 2 OS=Theobroma cacao GN=TCM_000079 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-37
Identity = 86/125 (68.80%), Postives = 98/125 (78.40%), Query Frame = 1


Query: 1   MEDIAEGEDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEKM 60
           MEDI E  +PV+DID  D++NPLAVV+Y              SCV PNYM +Q+DINEKM
Sbjct: 156 MEDIVE--EPVVDIDGSDAKNPLAVVDYVEDMYAYYRKMETFSCVSPNYMAQQSDINEKM 215

Query: 61  RTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEV 114
           R ILIDWLIEVH KFDLMGETL LTVNL DRFL+++T+ RKKLQLVGLV+MLLACKYEEV
Sbjct: 216 RAILIDWLIEVHDKFDLMGETLFLTVNLIDRFLSQQTVVRKKLQLVGLVAMLLACKYEEV 275

[Close]

BLAST of ClCG01G020870 vs. TrEMBL
Match: A0A061DFI4_THECC (Cyclin B2,1 isoform 1 OS=Theobroma cacao GN=TCM_000079 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-37
Identity = 86/125 (68.80%), Postives = 98/125 (78.40%), Query Frame = 1


Query: 1   MEDIAEGEDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEKM 60
           MEDI E  +PV+DID  D++NPLAVV+Y              SCV PNYM +Q+DINEKM
Sbjct: 179 MEDIVE--EPVVDIDGSDAKNPLAVVDYVEDMYAYYRKMETFSCVSPNYMAQQSDINEKM 238

Query: 61  RTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEV 114
           R ILIDWLIEVH KFDLMGETL LTVNL DRFL+++T+ RKKLQLVGLV+MLLACKYEEV
Sbjct: 239 RAILIDWLIEVHDKFDLMGETLFLTVNLIDRFLSQQTVVRKKLQLVGLVAMLLACKYEEV 298

[Close]

BLAST of ClCG01G020870 vs. TrEMBL
Match: A0A061DF58_THECC (Cyclin B2,1 isoform 4 OS=Theobroma cacao GN=TCM_000079 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-37
Identity = 86/125 (68.80%), Postives = 98/125 (78.40%), Query Frame = 1


Query: 1   MEDIAEGEDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEKM 60
           MEDI E  +PV+DID  D++NPLAVV+Y              SCV PNYM +Q+DINEKM
Sbjct: 71  MEDIVE--EPVVDIDGSDAKNPLAVVDYVEDMYAYYRKMETFSCVSPNYMAQQSDINEKM 130

Query: 61  RTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEV 114
           R ILIDWLIEVH KFDLMGETL LTVNL DRFL+++T+ RKKLQLVGLV+MLLACKYEEV
Sbjct: 131 RAILIDWLIEVHDKFDLMGETLFLTVNLIDRFLSQQTVVRKKLQLVGLVAMLLACKYEEV 190

[Close]

BLAST of ClCG01G020870 vs. TrEMBL
Match: A0A0D2QDP2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G003000 PE=3 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 3.9e-37
Identity = 84/125 (67.20%), Postives = 98/125 (78.40%), Query Frame = 1


Query: 1   MEDIAEGEDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEKM 60
           MEDI   E+P++DID  D++NPLAVVEY              SCV PNYM +Q+D+NEKM
Sbjct: 139 MEDIII-EEPIVDIDGCDTKNPLAVVEYVEDLHAYYKNMEKFSCVSPNYMDQQSDVNEKM 198

Query: 61  RTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEV 114
           R ILIDWLIEVH KFDLMGETL LTVNL DRFL+++T+ RKKLQLVGLV+MLLACKYEEV
Sbjct: 199 RAILIDWLIEVHDKFDLMGETLFLTVNLIDRFLSQQTVMRKKLQLVGLVAMLLACKYEEV 258

[Close]

BLAST of ClCG01G020870 vs. TAIR10
Match: AT1G20610.1 (AT1G20610.1 Cyclin B2;3)

HSP 1 Score: 150.2 bits (378), Expect = 7.7e-37
Identity = 78/125 (62.40%), Postives = 88/125 (70.40%), Query Frame = 1


Query: 1   MEDIAEGEDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEKM 60
           MED  + E+PVIDID+ D  NPLA VEY              SCVPPNYM  Q D+NE+M
Sbjct: 150 MEDADKEEEPVIDIDACDKNNPLAAVEYIHDMHTFYKNFEKLSCVPPNYMDNQQDLNERM 209

Query: 61  RTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEV 114
           R ILIDWLIEVH KF+LM ETL LT+N+ DRFLA   + RKKLQLVG+ ++LLACKYEEV
Sbjct: 210 RGILIDWLIEVHYKFELMEETLYLTINVIDRFLAVHQIVRKKLQLVGVTALLLACKYEEV 269

[Close]

BLAST of ClCG01G020870 vs. TAIR10
Match: AT2G17620.1 (AT2G17620.1 Cyclin B2;1)

HSP 1 Score: 149.1 bits (375), Expect = 1.7e-36
Identity = 78/125 (62.40%), Postives = 92/125 (73.60%), Query Frame = 1


Query: 1   MEDIAEGEDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEKM 60
           MED+   E+P++DID +DS+N LA VEY              SCVP +YM +Q D+NEKM
Sbjct: 145 MEDVTV-EEPIVDIDVLDSKNSLAAVEYVQDLYAFYRTMERFSCVPVDYMMQQIDLNEKM 204

Query: 61  RTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEV 114
           R ILIDWLIEVH KFDL+ ETL LTVNL DRFL+++ + RKKLQLVGLV++LLACKYEEV
Sbjct: 205 RAILIDWLIEVHDKFDLINETLFLTVNLIDRFLSKQNVMRKKLQLVGLVALLLACKYEEV 264

[Close]

BLAST of ClCG01G020870 vs. TAIR10
Match: AT4G35620.1 (AT4G35620.1 Cyclin B2;2)

HSP 1 Score: 146.7 bits (369), Expect = 8.5e-36
Identity = 78/126 (61.90%), Postives = 92/126 (73.02%), Query Frame = 1


Query: 1   MEDIAEG-EDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEK 60
           MED+ E  E+PV+DID  D+ N LA VEY              SCVP +YM +Q DI++K
Sbjct: 144 MEDMEEEQEEPVLDIDEYDANNSLAAVEYVQDLYDFYRKTERFSCVPLDYMAQQFDISDK 203

Query: 61  MRTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEE 114
           MR ILIDWLIEVH KF+LM ETL LTVNL DRFL+++ +ARKKLQLVGLV++LLACKYEE
Sbjct: 204 MRAILIDWLIEVHDKFELMNETLFLTVNLIDRFLSKQAVARKKLQLVGLVALLLACKYEE 263

[Close]

BLAST of ClCG01G020870 vs. TAIR10
Match: AT1G76310.1 (AT1G76310.1 CYCLIN B2;4)

HSP 1 Score: 144.4 bits (363), Expect = 4.2e-35
Identity = 79/122 (64.75%), Postives = 88/122 (72.13%), Query Frame = 1


Query: 5   AEGEDPVIDIDSIDSENPLAVVEYNS------------SCVPPNYMTKQTDINEKMRTIL 64
           AE E+ V+DIDS D  NPL+VVEY +            SCVPPNYM  Q DINE+MR IL
Sbjct: 154 AEVEESVMDIDSCDKNNPLSVVEYINDIYCFYKKNECRSCVPPNYMENQHDINERMRGIL 213

Query: 65  IDWLIEVHGKFDLMGETLLLTVNLRDRFLA-EKTLARKKLQLVGLVSMLLACKYEEVFVP 114
            DWLIEVH KF+LM ETL LT+NL DRFLA  + +ARKKLQLVG+ +MLLACKYEEV VP
Sbjct: 214 FDWLIEVHYKFELMEETLYLTINLIDRFLAVHQHIARKKLQLVGVTAMLLACKYEEVSVP 273

[Close]

BLAST of ClCG01G020870 vs. TAIR10
Match: AT2G26760.1 (AT2G26760.1 Cyclin B1;4)

HSP 1 Score: 116.7 bits (291), Expect = 9.5e-27
Identity = 60/118 (50.85%), Postives = 80/118 (67.80%), Query Frame = 1


Query: 8   EDPVIDIDSIDSENPLAVVEYNSSCVP-----------PNYMTKQTDINEKMRTILIDWL 67
           +D VIDID++D+ N LA VEY                  +Y+  Q +INEKMR+ILIDWL
Sbjct: 110 KDAVIDIDAVDANNELAAVEYVEDIFKFYRTVEEEGGIKDYIGSQPEINEKMRSILIDWL 169

Query: 68  IEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEVFVPVVH 115
           ++VH KF+LM ETL LT+NL DRFL+   + R++LQL+GL +ML+ACKYEE++ P V+
Sbjct: 170 VDVHRKFELMPETLYLTINLVDRFLSLTMVHRRELQLLGLGAMLIACKYEEIWAPEVN 227

[Close]

BLAST of ClCG01G020870 vs. NCBI nr
Match: gi|659080650|ref|XP_008440906.1| (PREDICTED: G2/mitotic-specific cyclin-2-like [Cucumis melo])

HSP 1 Score: 190.3 bits (482), Expect = 1.9e-45
Identity = 99/125 (79.20%), Postives = 104/125 (83.20%), Query Frame = 1


Query: 1   MEDIAEGEDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEKM 60
           MEDIAE EDP+IDID +DS+NPLAVVEY            NSSCVPPNYMTKQ DINEKM
Sbjct: 161 MEDIAEEEDPLIDIDIVDSDNPLAVVEYVDDLYAHYRKIENSSCVPPNYMTKQIDINEKM 220

Query: 61  RTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEV 114
           R ILIDWLIEVH KFDLMGETL LTVNL DRFLA+KT+ RKKLQLVGLVSMLLACKYEEV
Sbjct: 221 RAILIDWLIEVHDKFDLMGETLFLTVNLIDRFLAQKTVVRKKLQLVGLVSMLLACKYEEV 280

[Close]

BLAST of ClCG01G020870 vs. NCBI nr
Match: gi|778719894|ref|XP_011658071.1| (PREDICTED: G2/mitotic-specific cyclin-2 [Cucumis sativus])

HSP 1 Score: 189.9 bits (481), Expect = 2.5e-45
Identity = 100/125 (80.00%), Postives = 103/125 (82.40%), Query Frame = 1


Query: 1   MEDIAEGEDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEKM 60
           MEDIAE EDPVIDID IDS NPLAVVEY            NSSCVPPNYMTKQ DINEKM
Sbjct: 161 MEDIAEEEDPVIDIDIIDSNNPLAVVEYVDDLYAHYRKIENSSCVPPNYMTKQVDINEKM 220

Query: 61  RTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEV 114
           R ILIDWLIEVH KFDLMGETL LTVNL DRFLA+K++ RKKLQLVGLVSMLLACKYEEV
Sbjct: 221 RAILIDWLIEVHDKFDLMGETLFLTVNLIDRFLAQKSVVRKKLQLVGLVSMLLACKYEEV 280

[Close]

BLAST of ClCG01G020870 vs. NCBI nr
Match: gi|590701996|ref|XP_007046526.1| (Cyclin B2,1 isoform 2 [Theobroma cacao])

HSP 1 Score: 163.7 bits (413), Expect = 1.9e-37
Identity = 86/125 (68.80%), Postives = 98/125 (78.40%), Query Frame = 1


Query: 1   MEDIAEGEDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEKM 60
           MEDI E  +PV+DID  D++NPLAVV+Y              SCV PNYM +Q+DINEKM
Sbjct: 156 MEDIVE--EPVVDIDGSDAKNPLAVVDYVEDMYAYYRKMETFSCVSPNYMAQQSDINEKM 215

Query: 61  RTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEV 114
           R ILIDWLIEVH KFDLMGETL LTVNL DRFL+++T+ RKKLQLVGLV+MLLACKYEEV
Sbjct: 216 RAILIDWLIEVHDKFDLMGETLFLTVNLIDRFLSQQTVVRKKLQLVGLVAMLLACKYEEV 275

[Close]

BLAST of ClCG01G020870 vs. NCBI nr
Match: gi|590702003|ref|XP_007046528.1| (Cyclin B2,1 isoform 4 [Theobroma cacao])

HSP 1 Score: 163.7 bits (413), Expect = 1.9e-37
Identity = 86/125 (68.80%), Postives = 98/125 (78.40%), Query Frame = 1


Query: 1   MEDIAEGEDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEKM 60
           MEDI E  +PV+DID  D++NPLAVV+Y              SCV PNYM +Q+DINEKM
Sbjct: 71  MEDIVE--EPVVDIDGSDAKNPLAVVDYVEDMYAYYRKMETFSCVSPNYMAQQSDINEKM 130

Query: 61  RTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEV 114
           R ILIDWLIEVH KFDLMGETL LTVNL DRFL+++T+ RKKLQLVGLV+MLLACKYEEV
Sbjct: 131 RAILIDWLIEVHDKFDLMGETLFLTVNLIDRFLSQQTVVRKKLQLVGLVAMLLACKYEEV 190

[Close]

BLAST of ClCG01G020870 vs. NCBI nr
Match: gi|590701992|ref|XP_007046525.1| (Cyclin B2,1 isoform 1 [Theobroma cacao])

HSP 1 Score: 163.7 bits (413), Expect = 1.9e-37
Identity = 86/125 (68.80%), Postives = 98/125 (78.40%), Query Frame = 1


Query: 1   MEDIAEGEDPVIDIDSIDSENPLAVVEY------------NSSCVPPNYMTKQTDINEKM 60
           MEDI E  +PV+DID  D++NPLAVV+Y              SCV PNYM +Q+DINEKM
Sbjct: 179 MEDIVE--EPVVDIDGSDAKNPLAVVDYVEDMYAYYRKMETFSCVSPNYMAQQSDINEKM 238

Query: 61  RTILIDWLIEVHGKFDLMGETLLLTVNLRDRFLAEKTLARKKLQLVGLVSMLLACKYEEV 114
           R ILIDWLIEVH KFDLMGETL LTVNL DRFL+++T+ RKKLQLVGLV+MLLACKYEEV
Sbjct: 239 RAILIDWLIEVHDKFDLMGETLFLTVNLIDRFLSQQTVVRKKLQLVGLVAMLLACKYEEV 298

The following BLAST results are available for this feature:

BLAST of ClCG01G020870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CCNB1_MEDSV	2.1e-36	64.80	G2/mitotic-specific cyclin-1 OS=Medicago sativa subsp. varia PE=2 SV=1	[more]
CCB23_ARATH	1.4e-35	62.40	Cyclin-B2-3 OS=Arabidopsis thaliana GN=CYCB2-3 PE=2 SV=2	[more]
CCB21_ARATH	3.1e-35	62.40	Cyclin-B2-1 OS=Arabidopsis thaliana GN=CYCB2-1 PE=1 SV=2	[more]
CCB22_ARATH	1.5e-34	61.90	Cyclin-B2-2 OS=Arabidopsis thaliana GN=CYCB2-2 PE=1 SV=2	[more]
CCNB2_MEDSA	2.0e-34	64.80	G2/mitotic-specific cyclin-2 (Fragment) OS=Medicago sativa PE=2 SV=1	[more]

BLAST of ClCG01G020870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJL7_CUCSA	1.7e-45	80.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G509580 PE=3 SV=1	[more]
A0A061DL66_THECC	1.3e-37	68.80	Cyclin B2,1 isoform 2 OS=Theobroma cacao GN=TCM_000079 PE=3 SV=1	[more]
A0A061DFI4_THECC	1.3e-37	68.80	Cyclin B2,1 isoform 1 OS=Theobroma cacao GN=TCM_000079 PE=3 SV=1	[more]
A0A061DF58_THECC	1.3e-37	68.80	Cyclin B2,1 isoform 4 OS=Theobroma cacao GN=TCM_000079 PE=3 SV=1	[more]
A0A0D2QDP2_GOSRA	3.9e-37	67.20	Uncharacterized protein OS=Gossypium raimondii GN=B456_003G003000 PE=3 SV=1	[more]

BLAST of ClCG01G020870 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20610.1	7.7e-37	62.40	Cyclin B2;3	[more]
AT2G17620.1	1.7e-36	62.40	Cyclin B2;1	[more]
AT4G35620.1	8.5e-36	61.90	Cyclin B2;2	[more]
AT1G76310.1	4.2e-35	64.75	CYCLIN B2;4	[more]
AT2G26760.1	9.5e-27	50.85	Cyclin B1;4	[more]

BLAST of ClCG01G020870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659080650\|ref\|XP_008440906.1\|	1.9e-45	79.20	PREDICTED: G2/mitotic-specific cyclin-2-like [Cucumis melo]	[more]
gi\|778719894\|ref\|XP_011658071.1\|	2.5e-45	80.00	PREDICTED: G2/mitotic-specific cyclin-2 [Cucumis sativus]	[more]
gi\|590701996\|ref\|XP_007046526.1\|	1.9e-37	68.80	Cyclin B2,1 isoform 2 [Theobroma cacao]	[more]
gi\|590702003\|ref\|XP_007046528.1\|	1.9e-37	68.80	Cyclin B2,1 isoform 4 [Theobroma cacao]	[more]
gi\|590701992\|ref\|XP_007046525.1\|	1.9e-37	68.80	Cyclin B2,1 isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006671	Cyclin_N
IPR013763	Cyclin-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G020870.1	ClCG01G020870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 31..113 score: 6.2
IPR013763	Cyclin-like	GENE3D	G3DSA:1.10.472.10		coord: 35..113 score: 1.1
IPR013763	Cyclin-like	unknown	SSF47954	Cyclin-like	coord: 25..113 score: 3.23
None	No IPR available	PANTHER	PTHR10177	CYCLINE	coord: 1..113 score: 1.5
None	No IPR available	PANTHER	PTHR10177:SF250	CYCLIN-B2-3-RELATED	coord: 1..113 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G020870	Cla014350	Watermelon (97103) v1	wcgwmB141

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G020870	Cucurbita pepo (Zucchini)	cpewcgB061
ClCG01G020870	Cucurbita pepo (Zucchini)	cpewcgB201
ClCG01G020870	Cucurbita pepo (Zucchini)	cpewcgB252
ClCG01G020870	Cucurbita pepo (Zucchini)	cpewcgB425
ClCG01G020870	Bottle gourd (USVL1VR-Ls)	lsiwcgB127
ClCG01G020870	Bottle gourd (USVL1VR-Ls)	lsiwcgB395
ClCG01G020870	Cucumber (Gy14) v2	cgybwcgB193
ClCG01G020870	Cucumber (Gy14) v2	cgybwcgB399
ClCG01G020870	Melon (DHL92) v3.6.1	medwcgB410
ClCG01G020870	Melon (DHL92) v3.6.1	medwcgB509
ClCG01G020870	Silver-seed gourd	carwcgB0335
ClCG01G020870	Silver-seed gourd	carwcgB0397
ClCG01G020870	Silver-seed gourd	carwcgB0623
ClCG01G020870	Cucumber (Chinese Long) v3	cucwcgB213
ClCG01G020870	Cucumber (Chinese Long) v3	cucwcgB455
ClCG01G020870	Watermelon (97103) v2	wcgwmbB089
ClCG01G020870	Watermelon (97103) v2	wcgwmbB095
ClCG01G020870	Wax gourd	wcgwgoB227
ClCG01G020870	Watermelon (Charleston Gray)	wcgwcgB042
ClCG01G020870	Cucumber (Gy14) v1	cgywcgB022
ClCG01G020870	Cucumber (Gy14) v1	cgywcgB558
ClCG01G020870	Cucurbita maxima (Rimu)	cmawcgB754
ClCG01G020870	Cucurbita maxima (Rimu)	cmawcgB579
ClCG01G020870	Cucurbita moschata (Rifu)	cmowcgB755
ClCG01G020870	Cucurbita moschata (Rifu)	cmowcgB286
ClCG01G020870	Cucurbita moschata (Rifu)	cmowcgB575
ClCG01G020870	Wild cucumber (PI 183967)	cpiwcgB212
ClCG01G020870	Wild cucumber (PI 183967)	cpiwcgB453
ClCG01G020870	Cucumber (Chinese Long) v2	cuwcgB209
ClCG01G020870	Cucumber (Chinese Long) v2	cuwcgB432
ClCG01G020870	Melon (DHL92) v3.5.1	mewcgB419
ClCG01G020870	Melon (DHL92) v3.5.1	mewcgB514
ClCG01G020870	Watermelon (97103) v1	wcgwmB118