ClCG01G018880 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G018880
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Lipase/lipooxygenase, PLAT/LH2 family protein LENGTH=181
Location	CG_Chr01 : 33338889 .. 33339967 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCCGATGAATCGCCCCTGAGCTGGCGTGGTTTTGGCAGATAAATTTTCTATATAATATAATATGTAGAAGAAGAAAATAAACTCCACATTCCACATTCCACAATAACACAACCATGGCTTCCAAATCTGCCCTCTTCCTCTCCATTCTCCTCTCCTTCTCTGCCATAGCTTTCTCCGATGTATTTCCACTAACTCTCTTCATATCTGGAATTATAAAAAGAAAATGACTGATACGCATTTTGGATTTGGTTGTTGCAGGATCCAGATTGCGTGTACACGATGTATATCAGAACAGGGTCGATCCTGAAAGCAGGGACGGACTCGGTGATTTCCGCCACGCTCTACACGGCGGAGGGGGACGGAATCCGGATCAAGGATCTGGAGAAATGGGGCGGGTTGATGGGACCCGACTATAACTACTTCGAGAGGGGCAATCTGGACATTTTCAGCGGAAGAGGTCCATGCCTGAGCGCACCCGTGTGTTCATTGAACCTGACCTCCGATGGATCGGGTCCGCACCATGGGTGGTACTGCAACTATGTGGAGGTGACCACAACGGGGGTTCACGGGTCGTGTAACCAAGCCCTGTTCACGGTGGAGCAGTGGTTGGCCCTTGATACGTCGCCGTATAGTCTTACCGCCATCCGGAATAACTGCCCCAGTGGGAGTGGAAGCCGCCGTGATTTGATCCGGTCGGGTGAGCCCAGTTTGAGATTGAAGCAGGTGGTATGAATTTGATGGGTGTATGTAGTATGTAATAAAATTGTTGTAGAAGAAGGTAAGCGAAAGAGGGCTTAATCGATGATTAAGCAGGATTTATCTGGAATTAAATCAAATGGGTGTATGTTTTTATTGGTATTTTGGGCGAGGATTAATGGTTAAATGGAGAGTAGTGTGTTTTGTCTTAGCTTTACTTTTTGATCCGATCTTGTTTGTCAGGAATCATGAACAATGGCTTTACAGTTTACAATACGAAAAGGAGCAATAATGAAAATCACAGCATTTAATTTCAATAATCAAATCGGATGTCGGCAAGAGGGACGTGGAGGGGTGTCCGTCAGAAAGCGCTTTGTCTTCG

mRNA sequence

GTCCGATGAATCGCCCCTGAGCTGGCGTGGTTTTGGCAGATAAATTTTCTATATAATATAATATGTAGAAGAAGAAAATAAACTCCACATTCCACATTCCACAATAACACAACCATGGCTTCCAAATCTGCCCTCTTCCTCTCCATTCTCCTCTCCTTCTCTGCCATAGCTTTCTCCGATGATCCAGATTGCGTGTACACGATGTATATCAGAACAGGGTCGATCCTGAAAGCAGGGACGGACTCGGTGATTTCCGCCACGCTCTACACGGCGGAGGGGGACGGAATCCGGATCAAGGATCTGGAGAAATGGGGCGGGTTGATGGGACCCGACTATAACTACTTCGAGAGGGGCAATCTGGACATTTTCAGCGGAAGAGGTCCATGCCTGAGCGCACCCGTGTGTTCATTGAACCTGACCTCCGATGGATCGGGTCCGCACCATGGGTGGTACTGCAACTATGTGGAGGTGACCACAACGGGGGTTCACGGGTCGTGTAACCAAGCCCTGTTCACGGTGGAGCAGTGGTTGGCCCTTGATACGTCGCCGTATAGTCTTACCGCCATCCGGAATAACTGCCCCAGTGGGAGTGGAAGCCGCCGTGATTTGATCCGGTCGGGTGAGCCCAGTTTGAGATTGAAGCAGGTGGTATGAATTTGATGGGTGTATGTAGTATGTAATAAAATTGTTGTAGAAGAAGGTAAGCGAAAGAGGGCTTAATCGATGATTAAGCAGGATTTATCTGGAATTAAATCAAATGGGTGTATGTTTTTATTGGTATTTTGGGCGAGGATTAATGGTTAAATGGAGAGTAGTGTGTTTTGTCTTAGCTTTACTTTTTGATCCGATCTTGTTTGTCAGGAATCATGAACAATGGCTTTACAGTTTACAATACGAAAAGGAGCAATAATGAAAATCACAGCATTTAATTTCAATAATCAAATCGGATGTCGGCAAGAGGGACGTGGAGGGGTGTCCGTCAGAAAGCGCTTTGTCTTCG

Coding sequence (CDS)

ATGGCTTCCAAATCTGCCCTCTTCCTCTCCATTCTCCTCTCCTTCTCTGCCATAGCTTTCTCCGATGATCCAGATTGCGTGTACACGATGTATATCAGAACAGGGTCGATCCTGAAAGCAGGGACGGACTCGGTGATTTCCGCCACGCTCTACACGGCGGAGGGGGACGGAATCCGGATCAAGGATCTGGAGAAATGGGGCGGGTTGATGGGACCCGACTATAACTACTTCGAGAGGGGCAATCTGGACATTTTCAGCGGAAGAGGTCCATGCCTGAGCGCACCCGTGTGTTCATTGAACCTGACCTCCGATGGATCGGGTCCGCACCATGGGTGGTACTGCAACTATGTGGAGGTGACCACAACGGGGGTTCACGGGTCGTGTAACCAAGCCCTGTTCACGGTGGAGCAGTGGTTGGCCCTTGATACGTCGCCGTATAGTCTTACCGCCATCCGGAATAACTGCCCCAGTGGGAGTGGAAGCCGCCGTGATTTGATCCGGTCGGGTGAGCCCAGTTTGAGATTGAAGCAGGTGGTATGA

Protein sequence

MASKSALFLSILLSFSAIAFSDDPDCVYTMYIRTGSILKAGTDSVISATLYTAEGDGIRIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYVEVTTTGVHGSCNQALFTVEQWLALDTSPYSLTAIRNNCPSGSGSRRDLIRSGEPSLRLKQVV

Homology

[Close]

BLAST of ClCG01G018880 vs. TrEMBL
Match: A0A0A0KGA0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500520 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 1.4e-86
Identity = 157/181 (86.74%), Postives = 168/181 (92.82%), Query Frame = 1


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTMYIRTGSILKAGTDSVISATLYTAEGDGIRI 60
           MA+KSALF SILLSFSAIAFSD+PDCVYT+YIRTGSILKAGTDSVI+ATLYTA GDGIRI
Sbjct: 27  MATKSALFFSILLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 86

Query: 61  KDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYVEVT 120
            DLEKWGGLMGP YNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY+EVT
Sbjct: 87  MDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLEVT 146

Query: 121 TTGVHGSCNQALFTVEQWLALDTSPYSLTAIRNNCPSGSGSR--RDLIRSGEPSLRLKQV 180
           TTGVH  C+Q LFTVEQWLALD SPY+LT I+NNCPSGSGS   RDLIRSG+P+L+LKQV
Sbjct: 147 TTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDLIRSGDPNLKLKQV 206

[Close]

BLAST of ClCG01G018880 vs. TrEMBL
Match: A0A0A0KLY3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500530 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 4.1e-78
Identity = 143/165 (86.67%), Postives = 148/165 (89.70%), Query Frame = 1


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTMYIRTGSILKAGTDSVISATLYTAEGDGIRI 60
           MA KS LFLSILLSFSAIAFSDD DCVYT+YIRTGS LKAGTDSVI+ATLY+A+GD +RI
Sbjct: 1   MAYKSLLFLSILLSFSAIAFSDDADCVYTVYIRTGSTLKAGTDSVIAATLYSADGDEVRI 60

Query: 61  KDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYVEVT 120
           KDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNYVEVT
Sbjct: 61  KDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120

Query: 121 TTGVHGSCNQALFTVEQWLALDTSPYSLTAIRNNCPSGSGSRRDL 166
            TGVH  C Q LFTVEQWLALD SPY LTAIRN C SGSG R DL
Sbjct: 121 KTGVHMPCEQTLFTVEQWLALDVSPYELTAIRNECLSGSGIRGDL 165

[Close]

BLAST of ClCG01G018880 vs. TrEMBL
Match: A0A161ZVA3_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021845 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.1e-62
Identity = 116/166 (69.88%), Postives = 136/166 (81.93%), Query Frame = 1


Query: 6   ALFLSILLSFSAIAFSDDPDCVYTMYIRTGSILKAGTDSVISATLYTAEGDGIRIKDLEK 65
           ++ L I+LS ++I  S+D DCVYT+Y+RTGS+LKAGTDS+++ TL  A G G+RIKDLEK
Sbjct: 12  SIHLFIVLSLASIVRSEDSDCVYTIYVRTGSVLKAGTDSIMTVTLSDANGWGVRIKDLEK 71

Query: 66  WGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYVEVTTTGVH 125
           WGGLMGP YNYFERGNLDIFSG+GPCLSAPVCS+NLTSDGSG HHGWYCNYVEVT+TG H
Sbjct: 72  WGGLMGPGYNYFERGNLDIFSGKGPCLSAPVCSMNLTSDGSGSHHGWYCNYVEVTSTGAH 131

Query: 126 GSCNQALFTVEQWLALDTSPYSLTAIRNNCPS--GSGSRRDLIRSG 170
             C Q  FTVEQWLA DTSPY LTA+RN C +    G+R+ L  SG
Sbjct: 132 VPCAQKTFTVEQWLATDTSPYELTAVRNYCKAKEEGGARKMLKGSG 177

[Close]

BLAST of ClCG01G018880 vs. TrEMBL
Match: A0A068U1F2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00036485001 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.4e-62
Identity = 116/147 (78.91%), Postives = 125/147 (85.03%), Query Frame = 1


Query: 9   LSILLSFSAIAFSDDPDCVYTMYIRTGSILKAGTDSVISATLYTAEGDGIRIKDLEKWGG 68
           L ILLS   I+ SDDPDCVY++YIRTGSILK GTDS+IS TLY A+G GIRI DLE WGG
Sbjct: 13  LFILLSIFTISRSDDPDCVYSVYIRTGSILKGGTDSIISLTLYDADGYGIRINDLEAWGG 72

Query: 69  LMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYVEVTTTGVHGSC 128
           LMGP YNYFERGNLDIFSGRGPCL+ PVC++NLTSDGSG HHGWY NYVEVTTTGVH +C
Sbjct: 73  LMGPGYNYFERGNLDIFSGRGPCLTGPVCAMNLTSDGSGSHHGWYVNYVEVTTTGVHKAC 132

Query: 129 NQALFTVEQWLALDTSPYSLTAIRNNC 156
            Q  FTVEQWLA DTSPY LTAIRN C
Sbjct: 133 FQQQFTVEQWLATDTSPYELTAIRNYC 159

[Close]

BLAST of ClCG01G018880 vs. TrEMBL
Match: M5W195_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011989mg PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.9e-62
Identity = 121/176 (68.75%), Postives = 137/176 (77.84%), Query Frame = 1


Query: 5   SALFLSILLS-FSAIAFSDDPDCVYTMYIRTGSILKAGTDSVISATLYTAEGDGIRIKDL 64
           + LF S+LLS F  +AFSDDPDCVYT+Y+RTGSILK GTDS  +  LY A G GI I++L
Sbjct: 9   NTLFFSLLLSLFLTLAFSDDPDCVYTVYVRTGSILKGGTDSNANVRLYDAYGYGIEIRNL 68

Query: 65  EKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYVEVTTTG 124
           E WGGLMGP +NYFERGNLDIFSGRGPCL AP+C+LNLTSDGSGPHHGWY NYVEVT+TG
Sbjct: 69  ETWGGLMGPGHNYFERGNLDIFSGRGPCLQAPICALNLTSDGSGPHHGWYINYVEVTSTG 128

Query: 125 VHGSCNQALFTVEQWLALDTSPYSLTAIRNNCPS---GSGSRRD---LIRSGEPSL 174
            H  C+Q LFT+EQWLA DTSPY LTA+RN C S   G   RR    +IRSG   L
Sbjct: 129 AHIPCSQQLFTIEQWLATDTSPYELTAVRNYCNSDDDGVQKRRHTHRMIRSGSSDL 184

[Close]

BLAST of ClCG01G018880 vs. TAIR10
Match: AT4G39730.1 (AT4G39730.1 Lipase/lipooxygenase, PLAT/LH2 family protein)

HSP 1 Score: 238.0 bits (606), Expect = 4.4e-63
Identity = 110/159 (69.18%), Postives = 126/159 (79.25%), Query Frame = 1


Query: 1   MASKSAL--FLSILLSFSAIAFS-DDPDCVYTMYIRTGSILKAGTDSVISATLYTAEGDG 60
           MA +  L  FL +L + SA+AF+ DDPDCVYT Y+RTGSI KAGTDS+ISA +Y  +GD 
Sbjct: 1   MARRDVLLPFLLLLATVSAVAFAEDDPDCVYTFYLRTGSIWKAGTDSIISARIYDKDGDY 60

Query: 61  IRIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYV 120
           I IK+L+ W GLMGPDYNYFERGNLDIFSGR PCL +P+C+LNLTSDGSG HHGWY NYV
Sbjct: 61  IGIKNLQAWAGLMGPDYNYFERGNLDIFSGRAPCLPSPICALNLTSDGSGDHHGWYVNYV 120

Query: 121 EVTTTGVHGSCNQALFTVEQWLALDTSPYSLTAIRNNCP 157
           E+TT GVH  C+   F +EQWLA DTSPY LTA+RNNCP
Sbjct: 121 EITTAGVHAQCSTQDFEIEQWLATDTSPYELTAVRNNCP 159

[Close]

BLAST of ClCG01G018880 vs. TAIR10
Match: AT2G22170.1 (AT2G22170.1 Lipase/lipooxygenase, PLAT/LH2 family protein)

HSP 1 Score: 228.4 bits (581), Expect = 3.5e-60
Identity = 108/160 (67.50%), Postives = 123/160 (76.88%), Query Frame = 1


Query: 1   MASKSALFLSILL---SFSAIAFSDDP-DCVYTMYIRTGSILKAGTDSVISATLYTAEGD 60
           M  +  LFLS+LL   + SA+A +DD  DCVYT ++RTGS  KAGTDS+ISA +Y   GD
Sbjct: 2   MPRRDVLFLSLLLVIATVSAVALADDEADCVYTFFLRTGSTFKAGTDSIISARVYDKYGD 61

Query: 61  GIRIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNY 120
            I I++LE WGGLMGP YNY+ERGNLDIFSG+ PCL +PVCSLNLTSDGSG HHGWY NY
Sbjct: 62  YIGIRNLEAWGGLMGPGYNYYERGNLDIFSGKAPCLPSPVCSLNLTSDGSGDHHGWYVNY 121

Query: 121 VEVTTTGVHGSCNQALFTVEQWLALDTSPYSLTAIRNNCP 157
           VEVTT GVH  C+   F VEQWLA DTSPY L+A+RNNCP
Sbjct: 122 VEVTTAGVHAKCSYQSFDVEQWLASDTSPYELSAVRNNCP 161

[Close]

BLAST of ClCG01G018880 vs. TAIR10
Match: AT5G65158.1 (AT5G65158.1 Lipase/lipooxygenase, PLAT/LH2 family protein)

HSP 1 Score: 143.7 bits (361), Expect = 1.1e-34
Identity = 68/104 (65.38%), Postives = 74/104 (71.15%), Query Frame = 1


Query: 46  ISATLYTAEGDGIRIKDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDG 105
           +S  LY + G    I DL  WGGLMGP ++YFERGNLDIFSG G CLS PVC++NLTSDG
Sbjct: 1   MSLRLYDSYGQDAVISDLVSWGGLMGPFHDYFERGNLDIFSGLGSCLSGPVCAMNLTSDG 60

Query: 106 SGPHHGWYCNYVEVT-TTGVHGSCNQALFTVEQWLALDTSPYSL 149
           SG HHGWYCNYVEVT +     SC+Q  F VEQWLA D SPY L
Sbjct: 61  SGDHHGWYCNYVEVTMSESRRRSCSQEKFEVEQWLARDASPYEL 104

[Close]

BLAST of ClCG01G018880 vs. NCBI nr
Match: gi|659080097|ref|XP_008440609.1| (PREDICTED: lipoxygenase homology domain-containing protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 334.3 bits (856), Expect = 1.3e-88
Identity = 161/179 (89.94%), Postives = 167/179 (93.30%), Query Frame = 1


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTMYIRTGSILKAGTDSVISATLYTAEGDGIRI 60
           MA KS LFLSILLSFSAIAFSDDPDCVYT+YIRTGSILKAGTDSVI+ATLYTA GDGIRI
Sbjct: 1   MAYKSPLFLSILLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 60

Query: 61  KDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYVEVT 120
            DLEKWGG+MGPDYNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNYVEVT
Sbjct: 61  IDLEKWGGMMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120

Query: 121 TTGVHGSCNQALFTVEQWLALDTSPYSLTAIRNNCPSGSGSRRDLIRSGEPSLRLKQVV 180
           TTGVH SC+Q LFTVEQWLALD  PYSLTAI+NNCPSGS SRRDLIRSG P+L LKQVV
Sbjct: 121 TTGVHRSCDQQLFTVEQWLALDAPPYSLTAIQNNCPSGSESRRDLIRSGGPNLELKQVV 179

[Close]

BLAST of ClCG01G018880 vs. NCBI nr
Match: gi|659080095|ref|XP_008440608.1| (PREDICTED: lipoxygenase homology domain-containing protein 1 isoform X1 [Cucumis melo])

HSP 1 Score: 331.6 bits (849), Expect = 8.3e-88
Identity = 158/179 (88.27%), Postives = 166/179 (92.74%), Query Frame = 1


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTMYIRTGSILKAGTDSVISATLYTAEGDGIRI 60
           MA+KS LF + LLSFSAIAFSDDPDCVYT+YIRTGSILKAGTDSVI+ATLYTA GDGIRI
Sbjct: 1   MATKSTLFFAFLLSFSAIAFSDDPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 60

Query: 61  KDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYVEVT 120
            DLEKWGG+MGPDYNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNYVEVT
Sbjct: 61  IDLEKWGGMMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120

Query: 121 TTGVHGSCNQALFTVEQWLALDTSPYSLTAIRNNCPSGSGSRRDLIRSGEPSLRLKQVV 180
           TTGVH SC+Q LFTVEQWLALD  PYSLTAI+NNCPSGS SRRDLIRSG P+L LKQVV
Sbjct: 121 TTGVHRSCDQQLFTVEQWLALDAPPYSLTAIQNNCPSGSESRRDLIRSGGPNLELKQVV 179

[Close]

BLAST of ClCG01G018880 vs. NCBI nr
Match: gi|449451447|ref|XP_004143473.1| (PREDICTED: lipoxygenase homology domain-containing protein 1-like [Cucumis sativus])

HSP 1 Score: 327.0 bits (837), Expect = 2.0e-86
Identity = 157/181 (86.74%), Postives = 168/181 (92.82%), Query Frame = 1


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTMYIRTGSILKAGTDSVISATLYTAEGDGIRI 60
           MA+KSALF SILLSFSAIAFSD+PDCVYT+YIRTGSILKAGTDSVI+ATLYTA GDGIRI
Sbjct: 1   MATKSALFFSILLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 60

Query: 61  KDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYVEVT 120
            DLEKWGGLMGP YNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY+EVT
Sbjct: 61  MDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLEVT 120

Query: 121 TTGVHGSCNQALFTVEQWLALDTSPYSLTAIRNNCPSGSGSR--RDLIRSGEPSLRLKQV 180
           TTGVH  C+Q LFTVEQWLALD SPY+LT I+NNCPSGSGS   RDLIRSG+P+L+LKQV
Sbjct: 121 TTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDLIRSGDPNLKLKQV 180

[Close]

BLAST of ClCG01G018880 vs. NCBI nr
Match: gi|700193556|gb|KGN48760.1| (hypothetical protein Csa_6G500520 [Cucumis sativus])

HSP 1 Score: 327.0 bits (837), Expect = 2.0e-86
Identity = 157/181 (86.74%), Postives = 168/181 (92.82%), Query Frame = 1


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTMYIRTGSILKAGTDSVISATLYTAEGDGIRI 60
           MA+KSALF SILLSFSAIAFSD+PDCVYT+YIRTGSILKAGTDSVI+ATLYTA GDGIRI
Sbjct: 27  MATKSALFFSILLSFSAIAFSDNPDCVYTVYIRTGSILKAGTDSVITATLYTAAGDGIRI 86

Query: 61  KDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYVEVT 120
            DLEKWGGLMGP YNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNY+EVT
Sbjct: 87  MDLEKWGGLMGPGYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYLEVT 146

Query: 121 TTGVHGSCNQALFTVEQWLALDTSPYSLTAIRNNCPSGSGSR--RDLIRSGEPSLRLKQV 180
           TTGVH  C+Q LFTVEQWLALD SPY+LT I+NNCPSGSGS   RDLIRSG+P+L+LKQV
Sbjct: 147 TTGVHSPCDQQLFTVEQWLALDRSPYNLTNIQNNCPSGSGSESGRDLIRSGDPNLKLKQV 206

[Close]

BLAST of ClCG01G018880 vs. NCBI nr
Match: gi|659080099|ref|XP_008440610.1| (PREDICTED: lipoxygenase homology domain-containing protein 1 isoform X3 [Cucumis melo])

HSP 1 Score: 305.1 bits (780), Expect = 8.3e-80
Identity = 145/165 (87.88%), Postives = 151/165 (91.52%), Query Frame = 1


Query: 1   MASKSALFLSILLSFSAIAFSDDPDCVYTMYIRTGSILKAGTDSVISATLYTAEGDGIRI 60
           MA KS LFLSILLSFSAIAFSDD DCVYT+YIRTGS LKAGTDS I+ATLY+A+GD +RI
Sbjct: 1   MAYKSPLFLSILLSFSAIAFSDDADCVYTVYIRTGSTLKAGTDSAIAATLYSADGDEVRI 60

Query: 61  KDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSAPVCSLNLTSDGSGPHHGWYCNYVEVT 120
           KDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLS PVCSLNLTSDGSGPHHGWYCNYVEVT
Sbjct: 61  KDLEKWGGLMGPDYNYFERGNLDIFSGRGPCLSGPVCSLNLTSDGSGPHHGWYCNYVEVT 120

Query: 121 TTGVHGSCNQALFTVEQWLALDTSPYSLTAIRNNCPSGSGSRRDL 166
           TTGVH  C QALFTVEQWLALD SPY LTAIRNNC SGSG +RDL
Sbjct: 121 TTGVHRPCEQALFTVEQWLALDVSPYELTAIRNNCLSGSGIQRDL 165

The following BLAST results are available for this feature:

BLAST of ClCG01G018880 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGA0_CUCSA	1.4e-86	86.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500520 PE=4 SV=1	[more]
A0A0A0KLY3_CUCSA	4.1e-78	86.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G500530 PE=4 SV=1	[more]
A0A161ZVA3_DAUCA	1.1e-62	69.88	Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_021845 PE=4 SV=1	[more]
A0A068U1F2_COFCA	1.4e-62	78.91	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00036485001 PE=4 SV=1	[more]
M5W195_PRUPE	1.9e-62	68.75	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011989mg PE=4 SV=1	[more]

BLAST of ClCG01G018880 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39730.1	4.4e-63	69.18	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT2G22170.1	3.5e-60	67.50	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]
AT5G65158.1	1.1e-34	65.38	Lipase/lipooxygenase, PLAT/LH2 family protein	[more]

BLAST of ClCG01G018880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659080097\|ref\|XP_008440609.1\|	1.3e-88	89.94	PREDICTED: lipoxygenase homology domain-containing protein 1 isoform X2 [Cucumis...	[more]
gi\|659080095\|ref\|XP_008440608.1\|	8.3e-88	88.27	PREDICTED: lipoxygenase homology domain-containing protein 1 isoform X1 [Cucumis...	[more]
gi\|449451447\|ref\|XP_004143473.1\|	2.0e-86	86.74	PREDICTED: lipoxygenase homology domain-containing protein 1-like [Cucumis sativ...	[more]
gi\|700193556\|gb\|KGN48760.1\|	2.0e-86	86.74	hypothetical protein Csa_6G500520 [Cucumis sativus]	[more]
gi\|659080099\|ref\|XP_008440610.1\|	8.3e-80	87.88	PREDICTED: lipoxygenase homology domain-containing protein 1 isoform X3 [Cucumis...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001024	PLAT/LH2_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009695	jasmonic acid biosynthetic process
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0009611	response to wounding
biological_process	GO:0008150	biological_process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G018880.1	ClCG01G018880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001024	PLAT/LH2 domain	GENE3D	G3DSA:2.60.60.20		coord: 26..143 score: 1.3
IPR001024	PLAT/LH2 domain	PFAM	PF01477	PLAT	coord: 28..147 score: 4.7
IPR001024	PLAT/LH2 domain	PROFILE	PS50095	PLAT	coord: 26..153 score: 23
IPR001024	PLAT/LH2 domain	unknown	SSF49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 27..143 score: 2.67
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 1..179 score: 3.1E
None	No IPR available	PANTHER	PTHR31718:SF0	EXPRESSED PROTEIN-RELATED	coord: 1..179 score: 3.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G018880	Csa6G500520	Cucumber (Chinese Long) v2	cuwcgB432
ClCG01G018880	MELO3C007767	Melon (DHL92) v3.5.1	mewcgB514
ClCG01G018880	Cla014154	Watermelon (97103) v1	wcgwmB141
ClCG01G018880	Cla97C01G018340	Watermelon (97103) v2	wcgwmbB089
ClCG01G018880	Bhi03G000922	Wax gourd	wcgwgoB223
ClCG01G018880	CSPI06G30330	Wild cucumber (PI 183967)	cpiwcgB453
ClCG01G018880	Cucsa.104490	Cucumber (Gy14) v1	cgywcgB134
ClCG01G018880	CmaCh07G005350	Cucurbita maxima (Rimu)	cmawcgB754
ClCG01G018880	CmoCh07G005400	Cucurbita moschata (Rifu)	cmowcgB755
ClCG01G018880	Lsi01G007560	Bottle gourd (USVL1VR-Ls)	lsiwcgB127
ClCG01G018880	Cp4.1LG19g09620	Cucurbita pepo (Zucchini)	cpewcgB425
ClCG01G018880	CsGy6G029820	Cucumber (Gy14) v2	cgybwcgB399
ClCG01G018880	MELO3C007767.2	Melon (DHL92) v3.6.1	medwcgB509
ClCG01G018880	Carg16001	Silver-seed gourd	carwcgB0732
ClCG01G018880	CsaV3_6G045540	Cucumber (Chinese Long) v3	cucwcgB455

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G018880	Silver-seed gourd	carwcgB0397
ClCG01G018880	Silver-seed gourd	carwcgB0631
ClCG01G018880	Silver-seed gourd	carwcgB0915
ClCG01G018880	Silver-seed gourd	carwcgB0994
ClCG01G018880	Watermelon (97103) v2	wcgwmbB124
ClCG01G018880	Wax gourd	wcgwgoB218
ClCG01G018880	Watermelon (Charleston Gray)	wcgwcgB114
ClCG01G018880	Cucurbita maxima (Rimu)	cmawcgB155
ClCG01G018880	Cucurbita maxima (Rimu)	cmawcgB579
ClCG01G018880	Cucurbita maxima (Rimu)	cmawcgB692
ClCG01G018880	Cucurbita maxima (Rimu)	cmawcgB639
ClCG01G018880	Cucurbita moschata (Rifu)	cmowcgB143
ClCG01G018880	Cucurbita moschata (Rifu)	cmowcgB575
ClCG01G018880	Cucurbita moschata (Rifu)	cmowcgB641
ClCG01G018880	Cucurbita moschata (Rifu)	cmowcgB698
ClCG01G018880	Watermelon (97103) v1	wcgwmB122
ClCG01G018880	Cucurbita pepo (Zucchini)	cpewcgB061
ClCG01G018880	Cucurbita pepo (Zucchini)	cpewcgB102
ClCG01G018880	Cucurbita pepo (Zucchini)	cpewcgB204
ClCG01G018880	Cucurbita pepo (Zucchini)	cpewcgB374
ClCG01G018880	Cucurbita pepo (Zucchini)	cpewcgB731
ClCG01G018880	Bottle gourd (USVL1VR-Ls)	lsiwcgB426