ClCG01G017610 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G017610
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Pentatricopeptide repeat-containing protein
Location	CG_Chr01 : 32131413 .. 32136601 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGAGTCTTTGCTTCCGGAAATGGAAGCTTTGAGCAGAAATGCGCCAATTCCTTCACCCAAGTTTGAACCAGATACCGACAAAATTAAGCGAACGCTCCTTCAGAAGGGTGTTCGTCCCACTCCCAAAGTCGTCCGCTCACTCCGCAAGAAAGAAATTCAGAAGCACAATCGCAAACTCAAGCGACTGGCCCAACGACAAGCCGATCAGTCGCCACCTCTTTCTGAGTCCCAAAAGCAACTAATCGCCGAGGAAACTCATTTTCTGACGTTGAGAAGCGAGTACAAGGAGTTTTCGAAGGCCATTGAGGCAAAACCAGCCGGTGGCTTGATGGTCGGAAGGCCTTGGGAGAGACTGGAAAGAGTTAACCTTAAAGAACTTACCGGTTTTAGAACGGGATACAATCGGGATAATCTGAAGAAGGAGAGTTTGAGAGAATTGAGGAAGCTGTTTGAGGCTCGTAAGCTCGAGGAATTGCAGTGGGCTTTGGACGACGATGTGGAACTGAAGGAAGAGTGGTTGGAGAGTGAAAATGGTCACTGTGACGCCGTGAAACGGAGGCGTGGCGACGCAGAGGTTATTCGCTTCCTTGTTGACAGGTTTGTATTGGTTGAATCCGGTTTCTGAATAATTGACTGCGACTATGAAATTTTCGATAACTCAGATAGCAATGTTACTGTTTCCAGGCTCAGTTCGAAACCAATTTCCATGAGAGATTGGAAATTCTCAAAGATGATGATACGGTCAGGATTGCAGTTTAATGAAGGCCAACTACTTAAAATTTTGGATGCCCTCGGTGCTAAGGGATGTTGGAAACAGGCCTTATCAGTGGTTGAATGGGTGTACAATCTTAAAAGCCACAGTCATTTTAAAAGCAGGTAAGTTTTTTAATCCACACTGAATTACATATGTGAACAATTAGAATGGTGAATGTTGTCTGTTACCTTCTTTGTTGGAAACTTCCTCAAGTTTGATTAATTGCTATGTATACATGTTTCGATCAATGTATTAGTTTTATTTTTCAGTTCACTCATGAAGTACGTGCTTTTCTGTAATTAGAAAATTTGTGCCTTTTGCAGGTTTGTCTATACAAAGCTTTTAGCTGTTCTTGGGATGGCGAGGAAACCTCAGGAAGCCCTTAAGATATTTAATTTGATGAGGGTAAAGTCGTAGTGCCTTTGTCCTTTCATATTCCAAAAATATTTTTTCATATGTACGTGATGTTGTTAGATATGTTATAGTTACCTTATTCAGGGAGATGGCCAGATATATCCAGATATGGCTGCATATCACAGTATAGCTGTTACGCTGGGTCAAGCTGGTCTCTTGAAACAATTGCTGAAAGTTATTGAATGCATGAGGCAGCAACCGTCTAAAAAAGTTAGAAACAAGTGCCGCAAATCTTGGGATCCTGCAGTTGAACCCGACCTTGTTATATATAATGCTGTAAGAGATCATATTTATGTAGCATCTTGACACGTCCTTATATTTTTCAGTAATATGTTCTTTAGTATGGCGAAAGTACTTGTAATCTCCATGCTATCTCCTATAATATACTGTCAGGTAGATTGGCTCGTTTCTTAGAAATGCAGAGTGTTCAAAGGAATGCTAAAATAATCCCCGTGATACGATTTTACAACTACAAGTAGTACTACCTTTTTTAATTGTTCAGTCACTGAACTAGTAGAAGTTGCTAATCCCCTCCAAAATTTTTACTAGATTTTGAACGCATGCATTCCCACCCTTGAGTGGAAAGGGGTCTACTGGGTCTTTACACAATTGAGAAAGAGTGGTTTGAGACCTAATGGAGCAACATATGGGCTTTCTATGGAGGTACTTGCTGTCTCATTGAACTTCCTGGTTTTTTTTGTTTTTTTTTTTTTGTTTTTATTTTGTTTAATGGAGTGTGCTCATGGTGTTGCACCGGTGCCTCATTGAAATTATGAATGAAGGCCGTGAGGTTAATACCAGAAAAGAGCTCTCTCTCTTTGTCATGCTTACTTGTGGATTCAAAGTTATTGTTTTGAGATAGAGTGGTATTGTGTTTTGTATCCGCACGCTATGCTTTGCCTACTTATGTGCTTGCACTGAACGGCTACGTTAGAGATCTGACAATTATAAATTTTGACCTCTCTCTTATTGGATTTGAACTAGTATGAAAATATCAATTCTAATAGGAATATCTGTCTTCCACAAGACTGTTCATAATGTTGTCCCATGCCTTATGTCTGGACATATACTCATAGGTACAACATTGATGGACTTCAATTTGCTGAGAAATCCTTCACCATCTTTTTGCAGCTCTTCCCAAAATAGGTTTAGAGCTATCCTTCGGTCATCTATTAAACTCAAGTATAAGTCCTTCAACGATGCATCAGTGAGCTGTGATTGGGGTGGACAAGCTTTTCCTTGTACCTCAGTTGCTCACCTTTTACAACAAAACGAGGATAGGTGGGTTATCCACCCAATGCTGCTTGCTTGACCTTGATCTTCAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAGGGATCATTATCCACTTCTCATTTAGTTTTTATTAGGTATTCTTCATGGACCACTGAAAAGATGTGAGGGTCACATTGGGTAGGAATCACGAAAGTGCATTAGTAGCCTTATTCTCCAACCATGTTTATGTTGAATCTAGAAATCATATCTACGCAGTATATTTCACCTCTAATGCTCTGAATTAACTAACCACTACAACAATTATTTAAACATTCGCTCTTGGATATATATAATAGCATATTATTTATAATACTTTTGCCGTTTTTGCCATTCTGCGCTTATAATTAGTTAGACCCTCCATGATTCTTGGAATGTATCCTAGTAAGCTGTAGGATTGATATTTTATTTTTTCTAATAAGAGGAAGCTTGTCTGATGTTTTGAGTGGGAGAAAGCATGTCACTTTACATTTCTCTGTCTTTGTGATATTTATGTTTAAGGCTTATTGTACATGATTGTTGAAAGGTTATGCTGAAATCTGGAAAGTATGAGCAACTTCACAAGCTTTTTACAAAAATGAAGAAGAGTGGAGAAACTCTAAAGGCAAACACTTACAGAGGTAGTTTCATTTGTATATTTTCTACTAATGGTTGTTGTCTGGACCTTTGACTTAATATATCTCTGACTCTGACTTGGGACTGTAGTTCTTGTCAAAGCTTTTTGGGAGGAGGGAAATGTCAATGGAGCTATTGAGGCAGTCAGGGATATGGAACAAAGAGGAGTAGTTGGATCTGCCAGTGTCTATTATGAACTAGCTTGTTGTCTATGCTACAATGGGAGGTGGCAAGATGCATTAGTAGAGGTTGGTTCCCTGTCAATATATATATCTTACTTCTTTAGCATATGACTTTTAAGGACCTTTGTCTAGGATCATTTCTTTATATGATTCTATAATCTGTACATCCTGACTTCAGTAAATTTAAGTTTTACCTGCAATGATGATTTCCTTTTCTTTTTTCTTCTTTTTCATGATTCTGGTAATAAATCTTTCCAAAAGGGTTGCGGCAATGTTTATAACAATTTGAAATTTAGGTGTTATAATGCATTCGAATTATGTGAAAAAAACATCATCACATTCATGATTGTGTAGCGACTGGATGTTGCACGACCTTGATTTTATCAATACAATAGGAGGTAAGAAGTTCTGTTCTCATTATTAAAAGTGACTGCAGGTGGAAAAAATGAAAACACTATCACACATGAAACCTTTGGTGGTGACCTTCACTGGCATGATCTTATCTTCCTTCGATGGTGGACATATTGATGATTGTATATCTATCTTCGAGTACATAAAGCAAAAATGTGTGCCAAATATAGGAACCATAAATACCATGCTTAAAGTTTATGGCCGAAATGATATGTTTTCTAAAGCTAAAGATTTATTTGAAGAAATAAAGAGAAAAGCTGGTCGTTCCTCCAACAGTAGTGCTGTTCCTTCTTTAGTCCCAGATGAATATACGTATGGCTCAATGCTTGAGGCAGCTGCTAGTGCACTCCAATGGGAATATTTTGAGAATGTATACAGGGAAATGGCTCTGTCAGGATATCGGCTTGATCATAGTAAACATGCAATGCTACTTGTGGAAGCATCCAGAGCTGGGAAGGTAAAAACTATTTTTCTTTCATTTATCTAGTTTCTAGAACCTTCAGCCAGTATGATATGCAACTCAGTTCTTGAGAACTGCATGCTAGTAGAATCCTTCCAGTATTTGGTTTTTTGTTTACATCGCCCTTTTAATTTTATATGCCCCTTTATTTGTAGTGAAGTTAGTCCTAAATAGATGGCCGCCTGAACTAATATGCTACAGTTATCTATTTCAGTGGTATCTTTTAGATCATGCATTTGACACAATCTTGGAAGATGGACAGATTCCCCATCCACTATTATTCACAGAAATGATATTGCAACTTACAACTCAAGGTAACTATGAGCAGGCTGTCACCTTAGTTAGAACCATGGGTTATGCTCCATTTCAAGTGAGTGAAAGGCAATGGACAGAACTTTTTGAAGGGAACATGGACAGAATTTGTTGGAATAGCTTGAAAAAACTGTCAGATGCTCTTAGCGACTGCGATGCATCAGAAGCCACGGTCTCGAACTTGTCAAGGTCACTGCAGTCTCTTTGCAAACTTGACATACCAGAGAACACCTCCCAGTTTGTTGCTTCTGACCATGATGCAACAGATGGATTACAACTTCCTGGTTCCGAAATCATGCAGAATATGGAACTTCACCCAGATCGCGTCTCTGATTGTTGTGACAAATCATTGGATATTACTCCTGTTAACAGCCATGCAAGCTTGAACATGAAGATCAAGAGTGACTCAAAGATGTCCTCTTGGTCACCGAGTATTTCTGAAGGTGTTTTAAGGACTGACGAATTTTCGGATCGTTCCAACAATGAGCTCTCAACTTTTGTTTTGTGTGATGACAACGAAGACGATGAGGAAGAACTTAACATGTTGCTTGATGAATTTGATGATTCTTATGATTCAAACTTACCTTCTGTCAATGAAATACTGAAAACCTGGAAAGAGGAGAGGAAAACTGATGGGTTATTTCTCCACCCTTTGAATTAGTACACTTAAGAGTTTAGTAGTGTCTTGTTATTTCTGTATATATTACATATTTACACAATTTGGGAATCCATAGCTTTAAATCGTTG

mRNA sequence

TGGAGTCTTTGCTTCCGGAAATGGAAGCTTTGAGCAGAAATGCGCCAATTCCTTCACCCAAGTTTGAACCAGATACCGACAAAATTAAGCGAACGCTCCTTCAGAAGGGTGTTCGTCCCACTCCCAAAGTCGTCCGCTCACTCCGCAAGAAAGAAATTCAGAAGCACAATCGCAAACTCAAGCGACTGGCCCAACGACAAGCCGATCAGTCGCCACCTCTTTCTGAGTCCCAAAAGCAACTAATCGCCGAGGAAACTCATTTTCTGACGTTGAGAAGCGAGTACAAGGAGTTTTCGAAGGCCATTGAGGCAAAACCAGCCGGTGGCTTGATGGTCGGAAGGCCTTGGGAGAGACTGGAAAGAGTTAACCTTAAAGAACTTACCGGTTTTAGAACGGGATACAATCGGGATAATCTGAAGAAGGAGAGTTTGAGAGAATTGAGGAAGCTGTTTGAGGCTCGTAAGCTCGAGGAATTGCAGTGGGCTTTGGACGACGATGTGGAACTGAAGGAAGAGTGGTTGGAGAGTGAAAATGGTCACTGTGACGCCGTGAAACGGAGGCGTGGCGACGCAGAGGTTATTCGCTTCCTTGTTGACAGGCTCAGTTCGAAACCAATTTCCATGAGAGATTGGAAATTCTCAAAGATGATGATACGGTCAGGATTGCAGTTTAATGAAGGCCAACTACTTAAAATTTTGGATGCCCTCGGTGCTAAGGGATGTTGGAAACAGGCCTTATCAGTGGTTGAATGGGTGTACAATCTTAAAAGCCACAGTCATTTTAAAAGCAGGTTTGTCTATACAAAGCTTTTAGCTGTTCTTGGGATGGCGAGGAAACCTCAGGAAGCCCTTAAGATATTTAATTTGATGAGGGGAGATGGCCAGATATATCCAGATATGGCTGCATATCACAGTATAGCTGTTACGCTGGGTCAAGCTGGTCTCTTGAAACAATTGCTGAAAGTTATTGAATGCATGAGGCAGCAACCGTCTAAAAAAGTTAGAAACAAGTGCCGCAAATCTTGGGATCCTGCAGTTGAACCCGACCTTGTTATATATAATGCTATTTTGAACGCATGCATTCCCACCCTTGAGTGGAAAGGGGTCTACTGGGTCTTTACACAATTGAGAAAGAGTGGTTTGAGACCTAATGGAGCAACATATGGGCTTTCTATGGAGGTTATGCTGAAATCTGGAAAGTATGAGCAACTTCACAAGCTTTTTACAAAAATGAAGAAGAGTGGAGAAACTCTAAAGGCAAACACTTACAGAGTTCTTGTCAAAGCTTTTTGGGAGGAGGGAAATGTCAATGGAGCTATTGAGGCAGTCAGGGATATGGAACAAAGAGGAGTAGTTGGATCTGCCAGTGTCTATTATGAACTAGCTTGTTGTCTATGCTACAATGGGAGGTGGCAAGATGCATTAGTAGAGGTGGAAAAAATGAAAACACTATCACACATGAAACCTTTGGTGGTGACCTTCACTGGCATGATCTTATCTTCCTTCGATGGTGGACATATTGATGATTGTATATCTATCTTCGAGTACATAAAGCAAAAATGTGTGCCAAATATAGGAACCATAAATACCATGCTTAAAGTTTATGGCCGAAATGATATGTTTTCTAAAGCTAAAGATTTATTTGAAGAAATAAAGAGAAAAGCTGGTCGTTCCTCCAACAGTAGTGCTGTTCCTTCTTTAGTCCCAGATGAATATACGTATGGCTCAATGCTTGAGGCAGCTGCTAGTGCACTCCAATGGGAATATTTTGAGAATGTATACAGGGAAATGGCTCTGTCAGGATATCGGCTTGATCATAGTAAACATGCAATGCTACTTGTGGAAGCATCCAGAGCTGGGAAGTGGTATCTTTTAGATCATGCATTTGACACAATCTTGGAAGATGGACAGATTCCCCATCCACTATTATTCACAGAAATGATATTGCAACTTACAACTCAAGGTAACTATGAGCAGGCTGTCACCTTAGTTAGAACCATGGGTTATGCTCCATTTCAAGTGAGTGAAAGGCAATGGACAGAACTTTTTGAAGGGAACATGGACAGAATTTGTTGGAATAGCTTGAAAAAACTGTCAGATGCTCTTAGCGACTGCGATGCATCAGAAGCCACGGTCTCGAACTTGTCAAGGTCACTGCAGTCTCTTTGCAAACTTGACATACCAGAGAACACCTCCCAGTTTGTTGCTTCTGACCATGATGCAACAGATGGATTACAACTTCCTGGTTCCGAAATCATGCAGAATATGGAACTTCACCCAGATCGCGTCTCTGATTGTTGTGACAAATCATTGGATATTACTCCTGTTAACAGCCATGCAAGCTTGAACATGAAGATCAAGAGTGACTCAAAGATGTCCTCTTGGTCACCGAGTATTTCTGAAGGTGTTTTAAGGACTGACGAATTTTCGGATCGTTCCAACAATGAGCTCTCAACTTTTGTTTTGTGTGATGACAACGAAGACGATGAGGAAGAACTTAACATGTTGCTTGATGAATTTGATGATTCTTATGATTCAAACTTACCTTCTGTCAATGAAATACTGAAAACCTGGAAAGAGGAGAGGAAAACTGATGGGTTATTTCTCCACCCTTTGAATTAGTACACTTAAGAGTTTAGTAGTGTCTTGTTATTTCTGTATATATTACATATTTACACAATTTGGGAATCCATAGCTTTAAATCGTTG

Coding sequence (CDS)

ATGGAAGCTTTGAGCAGAAATGCGCCAATTCCTTCACCCAAGTTTGAACCAGATACCGACAAAATTAAGCGAACGCTCCTTCAGAAGGGTGTTCGTCCCACTCCCAAAGTCGTCCGCTCACTCCGCAAGAAAGAAATTCAGAAGCACAATCGCAAACTCAAGCGACTGGCCCAACGACAAGCCGATCAGTCGCCACCTCTTTCTGAGTCCCAAAAGCAACTAATCGCCGAGGAAACTCATTTTCTGACGTTGAGAAGCGAGTACAAGGAGTTTTCGAAGGCCATTGAGGCAAAACCAGCCGGTGGCTTGATGGTCGGAAGGCCTTGGGAGAGACTGGAAAGAGTTAACCTTAAAGAACTTACCGGTTTTAGAACGGGATACAATCGGGATAATCTGAAGAAGGAGAGTTTGAGAGAATTGAGGAAGCTGTTTGAGGCTCGTAAGCTCGAGGAATTGCAGTGGGCTTTGGACGACGATGTGGAACTGAAGGAAGAGTGGTTGGAGAGTGAAAATGGTCACTGTGACGCCGTGAAACGGAGGCGTGGCGACGCAGAGGTTATTCGCTTCCTTGTTGACAGGCTCAGTTCGAAACCAATTTCCATGAGAGATTGGAAATTCTCAAAGATGATGATACGGTCAGGATTGCAGTTTAATGAAGGCCAACTACTTAAAATTTTGGATGCCCTCGGTGCTAAGGGATGTTGGAAACAGGCCTTATCAGTGGTTGAATGGGTGTACAATCTTAAAAGCCACAGTCATTTTAAAAGCAGGTTTGTCTATACAAAGCTTTTAGCTGTTCTTGGGATGGCGAGGAAACCTCAGGAAGCCCTTAAGATATTTAATTTGATGAGGGGAGATGGCCAGATATATCCAGATATGGCTGCATATCACAGTATAGCTGTTACGCTGGGTCAAGCTGGTCTCTTGAAACAATTGCTGAAAGTTATTGAATGCATGAGGCAGCAACCGTCTAAAAAAGTTAGAAACAAGTGCCGCAAATCTTGGGATCCTGCAGTTGAACCCGACCTTGTTATATATAATGCTATTTTGAACGCATGCATTCCCACCCTTGAGTGGAAAGGGGTCTACTGGGTCTTTACACAATTGAGAAAGAGTGGTTTGAGACCTAATGGAGCAACATATGGGCTTTCTATGGAGGTTATGCTGAAATCTGGAAAGTATGAGCAACTTCACAAGCTTTTTACAAAAATGAAGAAGAGTGGAGAAACTCTAAAGGCAAACACTTACAGAGTTCTTGTCAAAGCTTTTTGGGAGGAGGGAAATGTCAATGGAGCTATTGAGGCAGTCAGGGATATGGAACAAAGAGGAGTAGTTGGATCTGCCAGTGTCTATTATGAACTAGCTTGTTGTCTATGCTACAATGGGAGGTGGCAAGATGCATTAGTAGAGGTGGAAAAAATGAAAACACTATCACACATGAAACCTTTGGTGGTGACCTTCACTGGCATGATCTTATCTTCCTTCGATGGTGGACATATTGATGATTGTATATCTATCTTCGAGTACATAAAGCAAAAATGTGTGCCAAATATAGGAACCATAAATACCATGCTTAAAGTTTATGGCCGAAATGATATGTTTTCTAAAGCTAAAGATTTATTTGAAGAAATAAAGAGAAAAGCTGGTCGTTCCTCCAACAGTAGTGCTGTTCCTTCTTTAGTCCCAGATGAATATACGTATGGCTCAATGCTTGAGGCAGCTGCTAGTGCACTCCAATGGGAATATTTTGAGAATGTATACAGGGAAATGGCTCTGTCAGGATATCGGCTTGATCATAGTAAACATGCAATGCTACTTGTGGAAGCATCCAGAGCTGGGAAGTGGTATCTTTTAGATCATGCATTTGACACAATCTTGGAAGATGGACAGATTCCCCATCCACTATTATTCACAGAAATGATATTGCAACTTACAACTCAAGGTAACTATGAGCAGGCTGTCACCTTAGTTAGAACCATGGGTTATGCTCCATTTCAAGTGAGTGAAAGGCAATGGACAGAACTTTTTGAAGGGAACATGGACAGAATTTGTTGGAATAGCTTGAAAAAACTGTCAGATGCTCTTAGCGACTGCGATGCATCAGAAGCCACGGTCTCGAACTTGTCAAGGTCACTGCAGTCTCTTTGCAAACTTGACATACCAGAGAACACCTCCCAGTTTGTTGCTTCTGACCATGATGCAACAGATGGATTACAACTTCCTGGTTCCGAAATCATGCAGAATATGGAACTTCACCCAGATCGCGTCTCTGATTGTTGTGACAAATCATTGGATATTACTCCTGTTAACAGCCATGCAAGCTTGAACATGAAGATCAAGAGTGACTCAAAGATGTCCTCTTGGTCACCGAGTATTTCTGAAGGTGTTTTAAGGACTGACGAATTTTCGGATCGTTCCAACAATGAGCTCTCAACTTTTGTTTTGTGTGATGACAACGAAGACGATGAGGAAGAACTTAACATGTTGCTTGATGAATTTGATGATTCTTATGATTCAAACTTACCTTCTGTCAATGAAATACTGAAAACCTGGAAAGAGGAGAGGAAAACTGATGGGTTATTTCTCCACCCTTTGAATTAG

Protein sequence

MEALSRNAPIPSPKFEPDTDKIKRTLLQKGVRPTPKVVRSLRKKEIQKHNRKLKRLAQRQADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKELTGFRTGYNRDNLKKESLRELRKLFEARKLEELQWALDDDVELKEEWLESENGHCDAVKRRRGDAEVIRFLVDRLSSKPISMRDWKFSKMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYNLKSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYIKQKCVPNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKAGRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGYRLDHSKHAMLLVEASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNYEQAVTLVRTMGYAPFQVSERQWTELFEGNMDRICWNSLKKLSDALSDCDASEATVSNLSRSLQSLCKLDIPENTSQFVASDHDATDGLQLPGSEIMQNMELHPDRVSDCCDKSLDITPVNSHASLNMKIKSDSKMSSWSPSISEGVLRTDEFSDRSNNELSTFVLCDDNEDDEEELNMLLDEFDDSYDSNLPSVNEILKTWKEERKTDGLFLHPLN

Homology

[Close]

BLAST of ClCG01G017610 vs. Swiss-Prot
Match: PP451_ARATH (Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidopsis thaliana GN=DG1 PE=1 SV=2)

HSP 1 Score: 858.2 bits (2216), Expect = 7.7e-248
Identity = 425/709 (59.94%), Postives = 543/709 (76.59%), Query Frame = 1


Query: 13  PKFEPDTDKIKRTLLQKGVRPTPKVVRSLRKKEIQKHNRKLKRLAQRQADQSPPLSESQK 72
           P+FEPD +KIKR LL+ GV PTPK++ +LRKKEIQKHNR+ KR  + +A+     +E+QK
Sbjct: 17  PEFEPDMEKIKRRLLKYGVDPTPKILNNLRKKEIQKHNRRTKRETESEAEV---YTEAQK 76

Query: 73  QLIAEETHFLTLRSEYKEFSKAIEAKPAG--GLMVGRPWERLERVNLKELTGF--RTGYN 132
           Q + EE  F TLR EYK+F+++I  K  G  GLMVG PWE +ERV LKEL     R   +
Sbjct: 77  QSMEEEARFQTLRREYKQFTRSISGKRGGDVGLMVGNPWEGIERVKLKELVSGVRREEVS 136

Query: 133 RDNLKKESLRELRKLFEARKLEELQWALDDDVELKEEWLESENGHCDAVKRRRGDAEVIR 192
              LKKE+L+EL+K+ E    ++L+W LDDDV+++E  L+ E    D  KR R + E +R
Sbjct: 137 AGELKKENLKELKKILE----KDLRWVLDDDVDVEEFDLDKE---FDPAKRWRNEGEAVR 196

Query: 193 FLVDRLSSKPISMRDWKFSKMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYNL 252
            LVDRLS + I+ + WKF +MM +SGLQF E Q+LKI+D LG K  WKQA +VV WVY+ 
Sbjct: 197 VLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSD 256

Query: 253 KSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGL 312
           K   H +SRFVYTKLL+VLG AR+PQEAL+IFN M GD Q+YPDMAAYH IAVTLGQAGL
Sbjct: 257 KKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGL 316

Query: 313 LKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQ 372
           LK+LLKVIE MRQ+P+K  +N  +K+WDP +EPDLV+YNAILNAC+PTL+WK V WVF +
Sbjct: 317 LKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVE 376

Query: 373 LRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEEGN 432
           LRK+GLRPNGATYGL+MEVML+SGK++++H  F KMK SGE  KA TY+VLV+A W EG 
Sbjct: 377 LRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGK 436

Query: 433 VNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFT 492
           +  A+EAVRDMEQ+GV+G+ SVYYELACCLC NGRW DA++EV +MK L + +PL +TFT
Sbjct: 437 IEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFT 496

Query: 493 GMILSSFDGGHIDDCISIFEYIKQKCVPNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKA 552
           G+I +S +GGH+DDC++IF+Y+K KC PNIGT N MLKVYGRNDMFS+AK+LFEEI    
Sbjct: 497 GLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIV--- 556

Query: 553 GRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGYRLDHSKHAMLLVE 612
                S     LVP+EYTY  MLEA+A +LQWEYFE+VY+ M LSGY++D +KHA +L+E
Sbjct: 557 -----SRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIE 616

Query: 613 ASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNYEQAVTLVRTMGYAPFQVS 672
           ASRAGKW LL+HAFD +LEDG+IPHPL FTE++   T +G++++A+TL+ T+  A FQ+S
Sbjct: 617 ASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLINTVALASFQIS 676

Query: 673 ERQWTELFEGNMDRICWNSLKKLSDALSDCD-ASEATVSNLSRSLQSLC 717
           E +WT+LFE + D +  ++L KLSD L +CD  SE TVSNLS+SL+S C
Sbjct: 677 EEEWTDLFEEHQDWLTQDNLHKLSDHLIECDYVSEPTVSNLSKSLKSRC 707

[Close]

BLAST of ClCG01G017610 vs. Swiss-Prot
Match: PPR64_ARATH (Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana GN=EMB2279 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 4.1e-68
Identity = 159/481 (33.06%), Postives = 249/481 (51.77%), Query Frame = 1


Query: 187 IRFLVDRLSSKPISMRDWKFSKMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVY 246
           I  L   L+   I+M +W+FSK +  + +++ +  +++++  LG  G W++ L V+EW+ 
Sbjct: 437 IEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQ 496

Query: 247 NLKSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQA 306
               +   K R +YT  L VLG +R+P EAL +F+ M      YPDM AY SIAVTLGQA
Sbjct: 497 RQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQA 556

Query: 307 GLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVF 366
           G +K+L  VI+ MR  P KK +    + WDP +EPD+V+YNA+LNAC+   +W+G +WV 
Sbjct: 557 GHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVL 616

Query: 367 TQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEE 426
            QL++ G +P+  TYGL MEVML   KY  +H+ F KM+KS     A  YRVLV   W+E
Sbjct: 617 QQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKS-SIPNALAYRVLVNTLWKE 676

Query: 427 GNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVT 486
           G  + A+  V DME RG+VGSA++YY+LA CLC  GR  + L        ++ + P+V+ 
Sbjct: 677 GKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGL------NMVNFVNPVVLK 736

Query: 487 FTGMILSSFDGGHIDDCISIFEYIKQKC----VPNIGTINTMLKVYGRNDMFSKAKDLFE 546
               ++   D  H     +I   +K+ C     P + T   +++    +     A  +F+
Sbjct: 737 LIENLIYKADLVH-----TIQFQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFD 796

Query: 547 EIKRKAGRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGYRLDHSK- 606
           ++K+           P+LV    T   ML+A      +E    ++++M+  G  + +S  
Sbjct: 797 QMKKVCS--------PNLV----TCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSD 856

Query: 607 -----------HAMLLVEASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNY 652
                         +L   +   KW    +A+  +L  G   +      M+L+ +  G  
Sbjct: 857 FESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKE 893

HSP 2 Score: 146.7 bits (369), Expect = 1.1e-33
Identity = 112/457 (24.51%), Postives = 210/457 (45.95%), Query Frame = 1


Query: 269  MARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIECMRQQPSKKVR 328
            M   P++  K   L + D ++ PD+  Y+++     Q    +    V++ ++Q+  K   
Sbjct: 569  MRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQK--- 628

Query: 329  NKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVM 388
                        P  V Y  I+   +   ++  V+  F +++KS + PN   Y + +  +
Sbjct: 629  ------------PSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSI-PNALAYRVLVNTL 688

Query: 389  LKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSA 448
             K GK ++       M+  G    A  Y  L +     G  N  +  V  +         
Sbjct: 689  WKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMVNFVNP------- 748

Query: 449  SVYYELACCLCYNGRWQDAL-VEVEKMKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIF 508
             V  +L   L Y       +  +++K+  +++ KPLVVT+TG+I +  D G+I +   IF
Sbjct: 749  -VVLKLIENLIYKADLVHTIQFQLKKICRVAN-KPLVVTYTGLIQACVDSGNIKNAAYIF 808

Query: 509  EYIKQKCVPNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKAGRSSNSSAVPS-LVPDEYT 568
            + +K+ C PN+ T N MLK Y +  +F +A++LF+++        NSS   S ++PD YT
Sbjct: 809  DQMKKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYT 868

Query: 569  YGSMLEAAASALQWEYFENVYREMALSGYRLDHSKHAMLLVEASRAGKWYLLDHAFDTIL 628
            + +ML+  A   +W+ F   YREM   GY  +  +H  +++EASRAGK  +++  ++ + 
Sbjct: 869  FNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMR 928

Query: 629  EDGQIPHPLLFTEMILQLTTQGNYEQAVTLVRTMGYAPFQVSERQW-TELFEGNMDRICW 688
               +IP   L  E   +   +G++  A++ +  +     +   R + T  +   + R   
Sbjct: 929  RSNRIPPSPLIKERFFRKLEKGDHISAISSLADLNGKIEETELRAFSTSAWSRVLSRFEQ 988

Query: 689  NSLKKLSDAL-----SDCDASEATVSNLSRSLQSLCK 718
            +S+ +L D +     S  ++S++ + NL  S +   K
Sbjct: 989  DSVLRLMDDVNRRLGSRSESSDSVLGNLLSSCKDYLK 1000

[Close]

BLAST of ClCG01G017610 vs. Swiss-Prot
Match: PP362_ARATH (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-24
Identity = 99/419 (23.63%), Postives = 177/419 (42.24%), Query Frame = 1


Query: 225 ILDALGAKGCWKQALSVVEWVYNLKSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMR 284
           I+  LG +G   +  S       L+        + YT L++    + + +EA+ +F  M 
Sbjct: 179 IISMLGKEG---RVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKME 238

Query: 285 GDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLV 344
            DG   P +  Y+ I    G+ G               P  K+ +   K     + PD  
Sbjct: 239 EDG-CKPTLITYNVILNVFGKMGT--------------PWNKITSLVEKMKSDGIAPDAY 298

Query: 345 IYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKM 404
            YN ++  C      +    VF +++ +G   +  TY   ++V  KS + ++  K+  +M
Sbjct: 299 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 358

Query: 405 KKSGETLKANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRW 464
             +G +    TY  L+ A+  +G ++ A+E    M ++G       Y  L       G+ 
Sbjct: 359 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 418

Query: 465 QDALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYIKQKCV-PNIGTINT 524
           + A+   E+M+     KP + TF   I    + G   + + IF+ I    + P+I T NT
Sbjct: 419 ESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 478

Query: 525 MLKVYGRNDMFSKAKDLFEEIKRKAGRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYF 584
           +L V+G+N M S+   +F+E+KR              VP+  T+ +++ A +    +E  
Sbjct: 479 LLAVFGQNGMDSEVSGVFKEMKR-----------AGFVPERETFNTLISAYSRCGSFEQA 538

Query: 585 ENVYREMALSGYRLDHSKHAMLLVEASRAGKWYLLDHAFDTILEDGQI-PHPLLFTEMI 642
             VYR M  +G   D S +  +L   +R G W   +      +EDG+  P+ L +  ++
Sbjct: 539 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL-AEMEDGRCKPNELTYCSLL 566

HSP 2 Score: 93.2 bits (230), Expect = 1.5e-17
Identity = 82/404 (20.30%), Postives = 162/404 (40.10%), Query Frame = 1


Query: 258 FVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIE 317
           F YT LL+    A K + A+ IF  MR  G   P++  +++     G  G   +++K+ +
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFD 444

Query: 318 CMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPN 377
            +         N C       + PD+V +N +L           V  VF +++++G  P 
Sbjct: 445 EI---------NVC------GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 504

Query: 378 GATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEEGNVNGAIEAVR 437
             T+   +    + G +EQ   ++ +M  +G T   +TY  ++ A    G    + + + 
Sbjct: 505 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 564

Query: 438 DMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFTGMILSSFDG 497
           +ME      +   Y  L      NG+    +  + +      ++P  V    ++L     
Sbjct: 565 EMEDGRCKPNELTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKC 624

Query: 498 GHIDDCISIFEYIKQKCV-PNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKAGRSSNSSA 557
             + +    F  +K++   P+I T+N+M+ +YGR  M +KA  + + +K +         
Sbjct: 625 DLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER--------- 684

Query: 558 VPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGYRLDHSKHAMLLVEASRAGKWY 617
                P   TY S++   + +  +   E + RE+   G + D   +  ++    R  +  
Sbjct: 685 --GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMR 744

Query: 618 LLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNYEQAVTLVRTM 661
                F  +   G +P  + +   I        +E+A+ +VR M
Sbjct: 745 DASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760

[Close]

BLAST of ClCG01G017610 vs. Swiss-Prot
Match: PP360_ARATH (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.4e-17
Identity = 94/399 (23.56%), Postives = 166/399 (41.60%), Query Frame = 1


Query: 210 MIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYN-LKSHSHFKSRFVYTKLLAVLG 269
           M+RSGL  +      +L     + C K  +   E V++ ++S         ++ ++++  
Sbjct: 331 MLRSGLSPDSTTYRSLL----MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT 390

Query: 270 MARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIECMRQQPSKKVR 329
            +    +AL  FN ++  G I PD   Y  +     + G++   + +   M QQ      
Sbjct: 391 RSGNLDKALMYFNSVKEAGLI-PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ------ 450

Query: 330 NKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVM 389
                        D+V YN IL+             +F ++ +  L P+  T  + ++  
Sbjct: 451 ---------GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 510

Query: 390 LKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSA 449
            K G  +   +LF KMK+    L   TY  L+  F + G+++ A E   DM  + ++ + 
Sbjct: 511 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 570

Query: 450 SVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFE 509
             Y  L   LC  G   +A    ++M +  ++KP V+    MI      G+  D  S  E
Sbjct: 571 ISYSILVNALCSKGHLAEAFRVWDEMIS-KNIKPTVMICNSMIKGYCRSGNASDGESFLE 630

Query: 510 -YIKQKCVPNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKAGRSSNSSAVPSLVPDEYTY 569
             I +  VP+  + NT++  + R +  SKA  L ++++ + G          LVPD +TY
Sbjct: 631 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG---------GLVPDVFTY 690

Query: 570 GSMLEAAASALQWEYFENVYREMALSGYRLDHSKHAMLL 607
            S+L       Q +  E V R+M   G   D S +  ++
Sbjct: 691 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMI 699

HSP 2 Score: 84.3 bits (207), Expect = 7.0e-15
Identity = 88/416 (21.15%), Postives = 170/416 (40.87%), Query Frame = 1


Query: 259 VYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIE- 318
           V+  L+     ARK +EA + F L+R  G     + A +++  +L + G ++    V + 
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKG-FTVSIDACNALIGSLVRIGWVELAWGVYQE 226

Query: 319 -------------------CMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLE 378
                                +    +KV     +  +  V PD+V YN +++A      
Sbjct: 227 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 286

Query: 379 WKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYRV 438
            +  + +   +   G  P   TY   +  + K GKYE+  ++F +M +SG +  + TYR 
Sbjct: 287 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 346

Query: 439 LVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLS 498
           L+    ++G+V    +   DM  R VV     +  +      +G    AL+    +K  +
Sbjct: 347 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE-A 406

Query: 499 HMKPLVVTFTGMILSSFDGGHIDDCISI-FEYIKQKCVPNIGTINTMLKVYGRNDMFSKA 558
            + P  V +T +I      G I   +++  E ++Q C  ++ T NT+L    +  M  +A
Sbjct: 407 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 466

Query: 559 KDLFEEIKRKAGRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGYRL 618
             LF E+  +A           L PD YT   +++        +    ++++M     RL
Sbjct: 467 DKLFNEMTERA-----------LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 526

Query: 619 DHSKHAMLLVEASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNYEQA 654
           D   +  LL    + G        +  ++    +P P+ ++ ++  L ++G+  +A
Sbjct: 527 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569

[Close]

BLAST of ClCG01G017610 vs. Swiss-Prot
Match: PP124_ARATH (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-16
Identity = 79/336 (23.51%), Postives = 141/336 (41.96%), Query Frame = 1


Query: 260 YTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIECM 319
           Y  LL+   +     EA  +F  M  DG I PD+  Y  +  T G+   L++L KV + +
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMN-DGGIVPDLTTYSHLVETFGK---LRRLEKVCDLL 309

Query: 320 RQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGA 379
            +  S                PD+  YN +L A   +   K    VF Q++ +G  PN  
Sbjct: 310 GEMASG------------GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 369

Query: 380 TYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEEGNVNGAIEAVRDM 439
           TY + + +  +SG+Y+ + +LF +MK S     A TY +L++ F E G     +    DM
Sbjct: 370 TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 429

Query: 440 EQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGH 499
            +  +      Y  +       G  +DA   ++ M T + + P    +TG+I +      
Sbjct: 430 VEENIEPDMETYEGIIFACGKGGLHEDARKILQYM-TANDIVPSSKAYTGVIEAFGQAAL 489

Query: 500 IDDCISIFEYIKQ-KCVPNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKAGRSSNSSAVP 559
            ++ +  F  + +    P+I T +++L  + R  +  +++ +             S  V 
Sbjct: 490 YEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL------------SRLVD 549

Query: 560 SLVP-DEYTYGSMLEAAASALQWEYFENVYREMALS 594
           S +P +  T+ + +EA     ++E     Y +M  S
Sbjct: 550 SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS 556

HSP 2 Score: 86.7 bits (213), Expect = 1.4e-15
Identity = 84/439 (19.13%), Postives = 182/439 (41.46%), Query Frame = 1


Query: 210 MIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYN---LKSHSHFKSRFVYTKLLAV 269
           + ++ L  N+  L  +      +G W+++L + +++      K + H     +YT ++++
Sbjct: 98  IFKNKLSLNDFAL--VFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEH-----IYTIMISL 157

Query: 270 LGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIECMRQQPSKK 329
           LG      + L++F+ M   G +   + +Y ++    G+ G  +  L++++ M+ +    
Sbjct: 158 LGREGLLDKCLEVFDEMPSQG-VSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK--- 217

Query: 330 VRNKCRKSWDPAVEPDLVIYNAILNACIPT-LEWKGVYWVFTQLRKSGLRPNGATYGLSM 389
                       + P ++ YN ++NAC    L+W+G+  +F ++R  G++P+  TY   +
Sbjct: 218 ------------ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLL 277

Query: 390 EVMLKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVV 449
                 G  ++   +F  M   G      TY  LV+ F +   +    + + +M   G +
Sbjct: 278 SACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL 337

Query: 450 GSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGHIDDCIS 509
              + Y  L      +G  ++A+    +M+  +   P   T++ ++      G  DD   
Sbjct: 338 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQA-AGCTPNANTYSVLLNLFGQSGRYDDVRQ 397

Query: 510 IFEYIKQKCV-PNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKAGRSSNSSAVPSLVPDE 569
           +F  +K     P+  T N +++V+G    F +   LF ++  +           ++ PD 
Sbjct: 398 LFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE-----------NIEPDM 457

Query: 570 YTYGSMLEAAASALQWEYFENVYREMALSGYRLDHSKHAMLLVEASRAGKWYLLDHAFDT 629
            TY  ++ A       E    + + M  +        +  ++    +A  +     AF+T
Sbjct: 458 ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNT 501

Query: 630 ILEDGQIP-----HPLLFT 639
           + E G  P     H LL++
Sbjct: 518 MHEVGSNPSIETFHSLLYS 501

HSP 3 Score: 45.8 bits (107), Expect = 2.7e-03
Identity = 59/318 (18.55%), Postives = 114/318 (35.85%), Query Frame = 1


Query: 210 MIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYNLKSHSHFKSRFVYTKLLAVLGM 269
           M  +G   N      +L+  G  G +     V +    +KS +       Y  L+ V G 
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDD---VRQLFLEMKSSNTDPDAATYNILIEVFGE 402

Query: 270 ARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIECMRQQPSKKVRN 329
               +E + +F+ M  +  I PDM  Y  I    G+ GL +   K+++ M          
Sbjct: 403 GGYFKEVVTLFHDMVEEN-IEPDMETYEGIIFACGKGGLHEDARKILQYMTAND------ 462

Query: 330 KCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVML 389
                    + P    Y  ++ A      ++     F  + + G  P+  T+   +    
Sbjct: 463 ---------IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA 522

Query: 390 KSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSAS 449
           + G  ++   + +++  SG     +T+   ++A+ + G    A++   DME+        
Sbjct: 523 RGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDER 582

Query: 450 VYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEY 509
               +     +     +   + E+MK  S + P ++ +  M+         DD   + E 
Sbjct: 583 TLEAVLSVYSFARLVDECREQFEEMKA-SDILPSIMCYCMMLAVYGKTERWDDVNELLEE 640

Query: 510 IKQKCVPNI-GTINTMLK 527
           +    V NI   I  M+K
Sbjct: 643 MLSNRVSNIHQVIGQMIK 640

[Close]

BLAST of ClCG01G017610 vs. TrEMBL
Match: A0A0A0KFY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495690 PE=4 SV=1)

HSP 1 Score: 1523.8 bits (3944), Expect = 0.0e+00
Identity = 766/866 (88.45%), Postives = 803/866 (92.73%), Query Frame = 1


Query: 1   MEALSRNAPIPSPKFEPDTDKIKRTLLQKGVRPTPKVVRSLRKKEIQKHNRKLKRLAQRQ 60
           MEAL+ N PIPSPKFEPDTDKIKR LLQKGV PTP++VRSLRKKEIQK+NRKLKR+A+RQ
Sbjct: 1   MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ 60

Query: 61  ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120
           + QSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVN KEL
Sbjct: 61  SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL 120

Query: 121 TGFRTGYNRDNLKKESLRELRKLFEARKLEELQWALDDDVELKEEWLESENGHCDAVKRR 180
           TG RTGYNRD+LKKESLRELRKLFE RKLEE QWALDDDVELKEEWLESEN   D VKRR
Sbjct: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR 180

Query: 181 RGDAEVIRFLVDRLSSKPISMRDWKFSKMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
           RGD EVIRFLVDRLSS PISMRDWKFS+MMIRSGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240

Query: 241 VVEWVYNLKSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIA 300
           VVEWVYNLKSHSH KSRFVYTKLLAVLGMARKPQEAL+IFNLMRGDGQIYPDMAAYHSIA
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300

Query: 301 VTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360
           VTLGQAGLLKQLLKVIE MRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK
Sbjct: 301 VTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360

Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYRVLV 420
           GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLH LFTKMKK+G+TLKANTYRVLV
Sbjct: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLV 420

Query: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHM 480
           KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNG+WQDALVEVEKMKTLSHM
Sbjct: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480

Query: 481 KPLVVTFTGMILSSFDGGHIDDCISIFEYIKQKCVPNIGTINTMLKVYGRNDMFSKAKDL 540
           KPLVVTFTGMI SSF+GGHIDDCISIFEY+KQ C PNIGTINTMLKVYGRNDM+SKAKDL
Sbjct: 481 KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDL 540

Query: 541 FEEIKRKAGRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGYRLDHS 600
           FEEIKRKA  SS+ SAVPSLVPDEYTY SMLEAAAS+LQWEYFE+VYREMALSGY+LD S
Sbjct: 541 FEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQS 600

Query: 601 KHAMLLVEASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNYEQAVTLVRTM 660
           KHA+LLVEAS+AGKWYLLDHAFDTILE GQIPHPLLFTEMILQLTTQ NYEQAVTLVRTM
Sbjct: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM 660

Query: 661 GYAPFQVSERQWTELFEGNMDRICWNSLKKLSDALSDCDASEATVSNLSRSLQSLCKLDI 720
           GYAPFQVSERQWTELFEGN DRI  N+LK+L  AL DCDASEATVSNLSRSLQSLCK DI
Sbjct: 661 GYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQSLCKFDI 720

Query: 721 PENTSQFVASDHDATDGLQLPGSEIMQNMELHPDRVSDCCDKSLDITPVNSHASLNMKIK 780
           PENTSQ VA DHDATD LQLP SE M+NM+LHPD      D+SLDI PV+ HASLNMK+ 
Sbjct: 721 PENTSQSVACDHDATDELQLPDSENMENMKLHPDE-----DESLDIIPVD-HASLNMKVN 780

Query: 781 SDSKMSSWSPSISEGVLRTDEFSDRSNNELSTFVLCDDNEDDEEELNMLLDEFDDSYDSN 840
           S+SKMS WS SIS+G L T +FSD SNN  S F LC ++EDDEEELN LLDEFDD+YDSN
Sbjct: 781 SESKMSPWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSN 840

Query: 841 LPSVNEILKTWKEERKTDGLFLHPLN 867
           LP+VNEIL+TWKEERK DGLFLH LN
Sbjct: 841 LPAVNEILETWKEERKADGLFLHSLN 860

[Close]

BLAST of ClCG01G017610 vs. TrEMBL
Match: M5VXJ6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001240mg PE=4 SV=1)

HSP 1 Score: 1002.3 bits (2590), Expect = 3.7e-289
Identity = 532/879 (60.52%), Postives = 642/879 (73.04%), Query Frame = 1


Query: 1   MEALSRNAP-IPSPKFEPDTDKIKRTLLQKGVRPTPKVVRSLRKKEIQKHNRKLKRLAQR 60
           MEAL  + P +P  KFEPDTDKIKR L   GV PTPK+V ++RKKEIQKHNRKL RLA+ 
Sbjct: 1   MEALQGSLPQLPHTKFEPDTDKIKRRLNNGGVYPTPKIVHTIRKKEIQKHNRKLNRLAKA 60

Query: 61  QADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGG-LMVGRPWERLERVNLK 120
               SPPLS+SQKQ +A+ETHF TL+ EY++F+KA++AK   G  MVGRPWE +ER+  +
Sbjct: 61  DPS-SPPLSQSQKQALADETHFQTLKREYRDFTKAVKAKTGDGESMVGRPWEGIERIGFR 120

Query: 121 ELTGFRTGYNRDNLKKESLRELRKLFEARKLEELQWALDDDVELKEEWLESENGHCDAVK 180
           EL      Y  + LKKE L+ LR++FEARKLE+L+W LDDD+ELKE+W++ EN   D  K
Sbjct: 121 ELASTSAEYGGEKLKKEELKALREMFEARKLEDLKWVLDDDIELKEDWMDGENRVWDPAK 180

Query: 181 R-RRGDAEVIRFLVDRLSSKPISMRDWKFSKMMIRSGLQFNEGQLLKILDALGAKGCWKQ 240
           R RRG+ EVI+FLVDRLS+   SM+DWK SKMM +SGLQF EGQ+LKIL  LGAKGCWK 
Sbjct: 181 RRRRGEGEVIQFLVDRLSATEFSMKDWKLSKMMKQSGLQFTEGQMLKILGGLGAKGCWKH 240

Query: 241 ALSVVEWVYNLKSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYH 300
           +L+VVEWVYN K + H KSRFVYTKLLA+LG AR+PQEAL IFNLM GD  IYPD AAYH
Sbjct: 241 SLAVVEWVYNDKGNKHCKSRFVYTKLLAILGKARRPQEALHIFNLMLGDFHIYPDAAAYH 300

Query: 301 SIAVTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTL 360
           SI VTLGQ GLLK+LLK+IE MRQ+P +  +N   K+WDP VEPD+++YNA+LNAC  + 
Sbjct: 301 SITVTLGQTGLLKELLKIIESMRQRPFRSNKNMFPKNWDPVVEPDVIVYNALLNACTQSH 360

Query: 361 EWKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYR 420
           +WKGV WVF QLRKSGL+PNGATYGL+MEVML+SGKY+ +H+LF KMK SGE  KA  Y+
Sbjct: 361 QWKGVSWVFNQLRKSGLKPNGATYGLAMEVMLQSGKYDLVHELFRKMKNSGEAPKALNYK 420

Query: 421 VLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTL 480
           VLV+AFW EG VN A+EAVRDMEQRGVVG+ SVYYELACCLC NGRWQDALVEVEKMK +
Sbjct: 421 VLVRAFWCEGKVNEAVEAVRDMEQRGVVGTGSVYYELACCLCNNGRWQDALVEVEKMKNV 480

Query: 481 SHMKPLVVTFTGMILSSFDGGHIDDCISIFEYIKQKCVPNIGTINTMLKVYGRNDMFSKA 540
           S+ KPL VTFTGMI SS +GGHID CISIF+++K +C PNIGTINTMLKV+GR+DMF KA
Sbjct: 481 SNTKPLEVTFTGMITSSMEGGHIDSCISIFKHMKNRCAPNIGTINTMLKVFGRSDMFFKA 540

Query: 541 KDLFEEIKRKAGRS--SNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGY 600
           K+LFEEIK     S  S       +VPD+YTY SML+A+ASALQWEYFE VY+EMALSGY
Sbjct: 541 KELFEEIKTVRAESDFSLEGGGTLVVPDQYTYTSMLKASASALQWEYFEYVYKEMALSGY 600

Query: 601 RLDHSKHAMLLVEASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNYEQAVT 660
           ++D +KHA LLV+ASR+GK+YLL+HAFDT LE G+IPHPL+FTEM+ Q T Q +Y++AVT
Sbjct: 601 QVDQTKHASLLVKASRSGKFYLLEHAFDTSLEAGEIPHPLIFTEMVFQATAQHDYKRAVT 660

Query: 661 LVRTMGYAPFQVSERQWTELFEGNMDRICWNSLKKLSDALSDCD-ASEATVSNLSRSLQS 720
           LV  M YAPFQVSERQWT+LFE N D I  + L+KL DAL +CD  SEATV NLSRSL  
Sbjct: 661 LVNAMAYAPFQVSERQWTDLFEKNGDTITQDGLEKLLDALHNCDVVSEATVLNLSRSLLR 720

Query: 721 LCKLDIPENTSQFVASDHDAT-------DGLQLPGSEIMQNMEL------HPDRVSDCCD 780
           LC+       S        AT       D  ++ G+ IM N  L      H  R  +  D
Sbjct: 721 LCRSYRSRGLSSSAPFGSGATETSSLDGDNEEIYGNGIMPNHSLESIDGSHNPR-REPLD 780

Query: 781 KS----LDITPVNSHASLNMKIKSDSKMSSWSPSISEGVLRTDEFSDRSNNELSTFVLCD 840
           KS    LD   VN HAS    +            ++  V R+ E+    + E ST     
Sbjct: 781 KSTNVPLDAFSVN-HASTRRDV----------DEVTRTVSRSSEYISDEDGEYST----- 840

Query: 841 DNEDDEEELNMLLDEFDDSYDSNLPSVNEILKTWKEERK 857
             E D+E   ++  + DDS+DS+LPS  EILK WKE RK
Sbjct: 841 --EIDKEIEALIYKDVDDSHDSDLPSAPEILKVWKERRK 859

[Close]

BLAST of ClCG01G017610 vs. TrEMBL
Match: A0A061DHQ1_THECC (Tetratricopeptide repeat-like superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_000805 PE=4 SV=1)

HSP 1 Score: 936.0 bits (2418), Expect = 3.2e-269
Identity = 493/903 (54.60%), Postives = 630/903 (69.77%), Query Frame = 1


Query: 10  IPSPKFEPDTDKIKRTLLQKGVRPTPKVVRSLRKKEIQKHNRKLKRLAQRQADQSPPLSE 69
           +P P+FEP+T+ IKR LL+KGV PTPK++R+LRK+EIQKH RK K        Q+PPL+ 
Sbjct: 11  LPPPQFEPNTENIKRKLLRKGVYPTPKIIRTLRKREIQKHTRKTKH----SQPQTPPLTA 70

Query: 70  SQKQLIAEETHFLTLRSEYKEFSKAIEAK--PAGGLMVGRPWERLERVNLKELTGFRTGY 129
            Q Q +AEE+HFLTL+ EYK FSK +  K  P    ++G+PWER+ER  L EL      +
Sbjct: 71  FQLQSLAEESHFLTLKREYKRFSKELNPKKEPRSPSLLGKPWERIERAKLAELVSKNGEF 130

Query: 130 NRDNLKKESLRELRKLFEARKLEELQWALDDDVELKEEW----LESENGHCDAVKRRRGD 189
           +  +LK+E+L ELR++FE    ++L+W LDDDV+++++      E      D  KR R +
Sbjct: 131 DGQSLKRENLVELREMFE----KDLRWVLDDDVDVEDDGGLLPREKPARDRDPSKRWRNE 190

Query: 190 AEVIRFLVDRLSSKPISMRDWKFSKMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVE 249
            E IRFLVDRLS + I+ R WKF ++M +SGLQF E QLL+I++ LG  G W+QA++VV+
Sbjct: 191 KEAIRFLVDRLSEREITERHWKFVRIMKQSGLQFTEWQLLRIVEGLGKNGKWRQAMAVVQ 250

Query: 250 WVYNLKSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTL 309
           W+Y  K H  FKSRFVYTKLL+VLG ARKPQEAL++FNLM GD  IYPD+AAYHSIAVT+
Sbjct: 251 WLYGNKEHKEFKSRFVYTKLLSVLGKARKPQEALRVFNLMLGDCHIYPDLAAYHSIAVTM 310

Query: 310 GQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVY 369
           GQAGLLK+LL +IE MRQ+P K+++N  RK+WDP +EPDLV+YNA+LNAC+P  +WKGV 
Sbjct: 311 GQAGLLKELLNIIERMRQRPYKRIKNMRRKNWDPVLEPDLVVYNAVLNACVPVHQWKGVS 370

Query: 370 WVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAF 429
           WVF QLRKSGLRPNGATYGL+MEVML+SGKY+ +H+ F KMK+SGE  +A +YRVLVKAF
Sbjct: 371 WVFEQLRKSGLRPNGATYGLAMEVMLQSGKYDLVHEFFRKMKRSGEAPRALSYRVLVKAF 430

Query: 430 WEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPL 489
           WEEG +N A+EAVRDMEQRGV+G+ASVYYELACCLC NGRW+DA++EV+KMK LS  KPL
Sbjct: 431 WEEGKINEAVEAVRDMEQRGVIGTASVYYELACCLCKNGRWRDAIIEVDKMKKLSQRKPL 490

Query: 490 VVTFTGMILSSFDGGHIDDCISIFEYIKQKCVPNIGTINTMLKVYGRNDMFSKAKDLFEE 549
            +TFTG+I++S DGGH +DCISIF+Y+K  C PNIGTIN MLKVYG+NDMFSKAK+LFEE
Sbjct: 491 EITFTGLIMASLDGGHFNDCISIFQYMKDHCAPNIGTINAMLKVYGQNDMFSKAKELFEE 550

Query: 550 I-KRKAG-RSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGYRLDHSK 609
           I K K+G   S +    +L+PD YTY  ML A+ASALQWEYFE VY+EM LSGY LD +K
Sbjct: 551 INKAKSGPYDSQNGKSTNLIPDGYTYSLMLGASASALQWEYFEYVYKEMTLSGYHLDQTK 610

Query: 610 HAMLLVEASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNYEQAVTLVRTMG 669
           HA+LLVEASRA KWYLL+HAFDT LE G+IPHPLLFTEMI+Q T Q NYE+ VTLV TM 
Sbjct: 611 HAILLVEASRARKWYLLEHAFDTFLEVGEIPHPLLFTEMIIQATAQSNYEKVVTLVNTMA 670

Query: 670 YAPFQVSERQWTELFEGNMDRICWNSLKKLSDALSDCD-ASEATVSNLSRSLQSLCKLDI 729
           +A +QVSE+QWTE FE N DRI   SL KL DALS+C+ +SE T SNL RSLQ LC    
Sbjct: 671 HALYQVSEKQWTEAFEENGDRISHGSLSKLLDALSNCELSSEITASNLIRSLQYLC---- 730

Query: 730 PENTSQFVASDHDATDGLQLPGSEIMQ----NMELHPDRVSDCCDKSLDITPVN-SHASL 789
                    S+ ++ DG +  GSE +     + ++  +++    D  L  T V+ +  S 
Sbjct: 731 -----GSAKSEPNSNDG-ETYGSERLNIQSISQDMRGEKIIAAMDPPLKATDVSFAVFSA 790

Query: 790 NMKIKSDSKMSSWSPSISEGVLRTDEFSDRSNNELSTFVLCDD----------------- 849
           N   K++         +   ++      D  ++   TF   +D                 
Sbjct: 791 NCNGKNE------EGGVDADLIHRLSNYDMDDSASKTFTCMEDFANDTASGDPTSMGKQV 850

Query: 850 --------------------NEDDEEELNMLLDEFDDSYDSNLPSVNEILKTWKEERKTD 862
                                +DDE E+ +L++E  DS  S LPS NEIL++WKE  K D
Sbjct: 851 SLLNLDEYTKDVDEAEVDLPIDDDEAEMELLINEDGDSSTSKLPSANEILESWKESSKND 889

[Close]

BLAST of ClCG01G017610 vs. TrEMBL
Match: B9HG05_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s14930g PE=4 SV=2)

HSP 1 Score: 927.2 bits (2395), Expect = 1.5e-266
Identity = 501/898 (55.79%), Postives = 639/898 (71.16%), Query Frame = 1


Query: 1   MEALSRNAPIPSPKFEPDTDKIKRTLLQKGVRPTPKVVRSLRKKEIQKHNRKLKRLA--Q 60
           MEA   ++    P+FEP+ + IKR LL++GV PTPK+V +LRKKEIQKHNRKL +    Q
Sbjct: 1   MEAAIASSSSSLPQFEPNIEAIKRRLLKRGVYPTPKIVHNLRKKEIQKHNRKLNKDVEFQ 60

Query: 61  RQADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIE----AKPAGGLMVGRPWERLER 120
           RQA            ++ EE+HF  L+ EYKEF+KAI      +  GGL+VG+PWER+ER
Sbjct: 61  RQA----------LFVLEEESHFQALKHEYKEFNKAISEERRGESGGGLLVGKPWERIER 120

Query: 121 VNLKELTGFRTGYNRDNLKKESLRELRKLFEARKLEELQWALDDDVELKE-EWLESENGH 180
           V LKE+      +N   LK+E+LR+L+++FE      L+W  DDD+++++ +WL S +  
Sbjct: 121 VKLKEIGSGSREFNGGKLKRENLRQLKEVFEGN----LKWVFDDDIDVEDSDWLRSGSEE 180

Query: 181 -CDAVKRRRGDAEVIRFLVDRLSSKPISMRDWKFSKMMIRSGLQFNEGQLLKILDALGAK 240
             D  KR RG+ E IRFLVDRLS + +S++DWK +K+M +SGL+F+EGQLLKI++ LG K
Sbjct: 181 KWDPAKRWRGEGEAIRFLVDRLSCREVSVKDWKLAKIMKQSGLRFSEGQLLKIVEELGNK 240

Query: 241 GCWKQALSVVEWVYNLKSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPD 300
           G W QA++VVEWVYN K     KSRFVYTKLL+VLG  R+ QEAL IFNLMR D +IYPD
Sbjct: 241 GKWSQAMAVVEWVYNDKERRDCKSRFVYTKLLSVLGKERRAQEALSIFNLMREDRRIYPD 300

Query: 301 MAAYHSIAVTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNA 360
           MAAYHSIAVTLGQ GLLK+L+KVIECMRQ+PSK++     K+WDP +EPDLVIYNAILNA
Sbjct: 301 MAAYHSIAVTLGQTGLLKELVKVIECMRQKPSKRINKMLNKNWDPVLEPDLVIYNAILNA 360

Query: 361 CIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLK 420
           C+P+ +WKGV WVF QLR+SGL+PNGATYGL+MEVML SGKY+ +H+ F KMKKSGE+LK
Sbjct: 361 CVPSQQWKGVSWVFQQLRRSGLKPNGATYGLAMEVMLLSGKYKSVHEYFRKMKKSGESLK 420

Query: 421 ANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVE 480
           A TY+VLV+AFWEEG VN A+EAVRDMEQRGVVG+ASVYYELACCLCYNGRWQDA++EVE
Sbjct: 421 ALTYKVLVRAFWEEGRVNEAVEAVRDMEQRGVVGAASVYYELACCLCYNGRWQDAMLEVE 480

Query: 481 KMKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYIKQKCVPNIGTINTMLKVYGRND 540
           KMK L + KPL V+ TGMI SS DGGHID+CISIFE++K  CVPNIGTINTMLKVY R+D
Sbjct: 481 KMKRLRYKKPLEVSLTGMIASSMDGGHIDNCISIFEHMKAHCVPNIGTINTMLKVYSRSD 540

Query: 541 MFSKAKDLFEEIKRKAGRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMAL 600
           +FS+AK+LFE+IK          +  +++PD YTY SMLE +A ALQWEYFE VY+EM+ 
Sbjct: 541 LFSEAKELFEDIK------GVDHSGTTIIPDGYTYSSMLEVSARALQWEYFEYVYKEMSF 600

Query: 601 SGYRLDHSKHAMLLVEASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNYEQ 660
           SGY+LD  KHA LLVEASR+GK +LL+HAFD ILE G+IPHPLLFTEM+ Q T Q NYE+
Sbjct: 601 SGYQLDQIKHAPLLVEASRSGKNHLLEHAFDEILEAGEIPHPLLFTEMVFQATAQENYER 660

Query: 661 AVTLVRTMGYAPFQVSERQWTELFEGNMDRICWNSLKKLSDALSDCD-ASEATVSNLSRS 720
           AVTL+ TM +A FQ+SERQWT+LFE N ++I  +SL+KL DA+  C  ASE TVSNLSRS
Sbjct: 661 AVTLINTMAHASFQISERQWTDLFEKNGEKISQDSLEKLLDAVGHCRMASEVTVSNLSRS 720

Query: 721 LQSLCKL----DIPENTSQFVASD--HDATDGLQLPGSEIMQ-----------NMELHPD 780
           L+SLC+     D+P   S    +D  H  T+  ++ G+               N+EL  D
Sbjct: 721 LRSLCRPGSSGDLPRTNSCIEDTDDTHINTNSGEIAGNRSAYMVTTSASMADGNLELDED 780

Query: 781 RVSDCCDKSLDITPVNSHASLNMKIKSDSKMSSWSPSI------SEGVLRTDEFSDR--- 840
              +    + D++ VN ++S N +       SS   S+      +  +++ D F+D    
Sbjct: 781 TFVNKTSITPDMSLVN-NSSTNREGDDPEAASSTGNSVNGLDVATNLLVKRDVFADDVAS 840

Query: 841 ------SNNELSTFVLCDDNEDDEE-ELNMLLDEFDDSYDSNLPSVNEILKTWKEERK 857
                  + +LS  +L +  +D EE EL +   E +D Y S LPS + IL  WKE RK
Sbjct: 841 GASTDCLDKKLSNILLEESAKDAEEVELEIGTTEANDLYRSELPSAHAILDVWKESRK 877

[Close]

BLAST of ClCG01G017610 vs. TrEMBL
Match: A0A0D2TJK9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G224000 PE=4 SV=1)

HSP 1 Score: 923.7 bits (2386), Expect = 1.7e-265
Identity = 485/882 (54.99%), Postives = 637/882 (72.22%), Query Frame = 1


Query: 10  IPSPKFEPDTDKIKRTLLQKGVRPTPKVVRSLRKKEIQKHNRKLKRLAQRQADQSPPLSE 69
           +P P FEP+T+ IKR LL+KGV PTPK+VR+LRK+EI KHNRK K+       ++P LS 
Sbjct: 11  LPPPHFEPNTENIKRRLLRKGVYPTPKIVRTLRKREILKHNRKTKQ----PQPETPSLSA 70

Query: 70  SQKQLIAEETHFLTLRSEYKEFSKAIEAKPA--GGLMVGRPWERLERVNLKELTGFRTGY 129
           S  Q +AEE+HFLTL+ EY+ FS+A+  K       + G+PWER+E   L++L       
Sbjct: 71  SDLQSLAEESHFLTLKREYRRFSEALNPKRERQSPSLAGKPWERIEGPKLRDLVSENEEL 130

Query: 130 NRDNLKKESLRELRKLFEARKLEELQWALDDDVELKEEWL----ESENGHCDAVKRRRGD 189
           + ++LK+++L+ELR++FE    E+L+W L+DDV+++++      E +    D  KR R +
Sbjct: 131 HGESLKRQNLKELREMFE----EDLRWVLEDDVDVEDDDCLLPTEKQMQDLDTSKRWRNE 190

Query: 190 AEVIRFLVDRLSSKPISMRDWKFSKMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVE 249
            E IRFLVDRLS + I+ R WKF ++M +SGLQF E QLL+I++ LG  G W+QA+++V+
Sbjct: 191 KEAIRFLVDRLSEREITERHWKFVRIMKQSGLQFTEWQLLRIVEGLGKNGKWRQAMAIVQ 250

Query: 250 WVYNLKSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTL 309
           W+Y  K    FKSRFVYTKLL+VLG AR+PQEAL+IF LM GD  IYPD+AAYHSIAVTL
Sbjct: 251 WLYGNKERKDFKSRFVYTKLLSVLGKARRPQEALQIFKLMLGDCLIYPDLAAYHSIAVTL 310

Query: 310 GQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVY 369
           GQAGLLK+LL +IECMRQ+PSK+++N  RK+WDP +EPDLV+YNA+LNAC+P  +WKGV 
Sbjct: 311 GQAGLLKELLNIIECMRQKPSKRIKNMRRKNWDPVLEPDLVVYNAVLNACVPLHQWKGVS 370

Query: 370 WVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAF 429
           WVF QLRKSGLRPNGATYGL+MEVML+SGKY+ +H+ F KMK+SGE  +A TY+VLVKAF
Sbjct: 371 WVFEQLRKSGLRPNGATYGLAMEVMLQSGKYDLVHEFFRKMKRSGEAPRALTYKVLVKAF 430

Query: 430 WEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPL 489
           WEEG +N A+EAV+DME+RGV+G+ASVYYELACCLC NGRWQDA++EV+K+K LS  KPL
Sbjct: 431 WEEGKINEAVEAVQDMERRGVIGTASVYYELACCLCRNGRWQDAMIEVDKIKRLSTRKPL 490

Query: 490 VVTFTGMILSSFDGGHIDDCISIFEYIKQKCVPNIGTINTMLKVYGRNDMFSKAKDLFEE 549
            +TFTG+I++S DGG++DDCISIF+Y+K  C PNIGTIN MLKVYG+NDMFSKAK+LFEE
Sbjct: 491 EITFTGLIMASLDGGYVDDCISIFQYMKDHCAPNIGTINAMLKVYGQNDMFSKAKELFEE 550

Query: 550 I-KRKAG-RSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGYRLDHSK 609
             K K+G  SS +    +L+PD +TY  MLEA+ASA QWEYFE VY+EMALSGY+LD SK
Sbjct: 551 TNKAKSGPYSSLNDKFGNLIPDGFTYSLMLEASASAHQWEYFEYVYKEMALSGYQLDQSK 610

Query: 610 HAMLLVEASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNYEQAVTLVRTMG 669
             +LLVEASRAGKWYLL+HAFD  LE G+IPHPL+FTEM++Q T + NYE+AVTLV TM 
Sbjct: 611 LPILLVEASRAGKWYLLEHAFDASLEGGEIPHPLIFTEMLIQATWRSNYEKAVTLVNTMA 670

Query: 670 YAPFQVSERQWTELFEGNMDRICWNSLKKLSDALSDCD-ASEATVSNLSRSLQSLCKLDI 729
           +APFQVSE+QWT+LF  N DRI    L KL DALS  + +SE TVSNL RSLQSLC    
Sbjct: 671 HAPFQVSEKQWTDLFLKNRDRITQGCLVKLFDALSSSELSSEITVSNLLRSLQSLCG-SA 730

Query: 730 PENTSQFVAS--DHDATDGLQLP---GSEIMQNMELHPDRVSDCCDKSLDIT-------- 789
           P  +S    +  +   ++ L +P   G+E  +     P + +D     L +T        
Sbjct: 731 PSTSSMSFGNFGESYGSERLNIPSISGNEKGKAATYPPLKATDTSFAMLSLTNAGKNEEG 790

Query: 790 --PVNSHASLNMKIKSD--SKMSSWSPSISEG----VLRTDEFSDRSNNELSTFVLCDDN 849
               +  AS       D  + ++S  P+   G    +L  DE+++   +E  T +  D N
Sbjct: 791 GVDADDSASKKHSCTGDFANDVTSGEPTNGSGKQVPLLNLDEYTE-DTDEAETDLPVDGN 850

Query: 850 EDDEEELNMLLDEFDDSYDSNLPSVNEILKTWKEERKTDGLF 862
            D    +++L+DE  DS  S LPS  EIL++WK+ R++DG++
Sbjct: 851 TD----MDLLIDEDSDSLTSKLPSAQEILESWKKSRESDGIY 878

[Close]

BLAST of ClCG01G017610 vs. TAIR10
Match: AT5G67570.1 (AT5G67570.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 858.2 bits (2216), Expect = 4.3e-249
Identity = 425/709 (59.94%), Postives = 543/709 (76.59%), Query Frame = 1


Query: 13  PKFEPDTDKIKRTLLQKGVRPTPKVVRSLRKKEIQKHNRKLKRLAQRQADQSPPLSESQK 72
           P+FEPD +KIKR LL+ GV PTPK++ +LRKKEIQKHNR+ KR  + +A+     +E+QK
Sbjct: 17  PEFEPDMEKIKRRLLKYGVDPTPKILNNLRKKEIQKHNRRTKRETESEAEV---YTEAQK 76

Query: 73  QLIAEETHFLTLRSEYKEFSKAIEAKPAG--GLMVGRPWERLERVNLKELTGF--RTGYN 132
           Q + EE  F TLR EYK+F+++I  K  G  GLMVG PWE +ERV LKEL     R   +
Sbjct: 77  QSMEEEARFQTLRREYKQFTRSISGKRGGDVGLMVGNPWEGIERVKLKELVSGVRREEVS 136

Query: 133 RDNLKKESLRELRKLFEARKLEELQWALDDDVELKEEWLESENGHCDAVKRRRGDAEVIR 192
              LKKE+L+EL+K+ E    ++L+W LDDDV+++E  L+ E    D  KR R + E +R
Sbjct: 137 AGELKKENLKELKKILE----KDLRWVLDDDVDVEEFDLDKE---FDPAKRWRNEGEAVR 196

Query: 193 FLVDRLSSKPISMRDWKFSKMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYNL 252
            LVDRLS + I+ + WKF +MM +SGLQF E Q+LKI+D LG K  WKQA +VV WVY+ 
Sbjct: 197 VLVDRLSGREINEKHWKFVRMMNQSGLQFTEDQMLKIVDRLGRKQSWKQASAVVHWVYSD 256

Query: 253 KSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGL 312
           K   H +SRFVYTKLL+VLG AR+PQEAL+IFN M GD Q+YPDMAAYH IAVTLGQAGL
Sbjct: 257 KKRKHLRSRFVYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGL 316

Query: 313 LKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQ 372
           LK+LLKVIE MRQ+P+K  +N  +K+WDP +EPDLV+YNAILNAC+PTL+WK V WVF +
Sbjct: 317 LKELLKVIERMRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVE 376

Query: 373 LRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEEGN 432
           LRK+GLRPNGATYGL+MEVML+SGK++++H  F KMK SGE  KA TY+VLV+A W EG 
Sbjct: 377 LRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLVRALWREGK 436

Query: 433 VNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFT 492
           +  A+EAVRDMEQ+GV+G+ SVYYELACCLC NGRW DA++EV +MK L + +PL +TFT
Sbjct: 437 IEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKRLENCRPLEITFT 496

Query: 493 GMILSSFDGGHIDDCISIFEYIKQKCVPNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKA 552
           G+I +S +GGH+DDC++IF+Y+K KC PNIGT N MLKVYGRNDMFS+AK+LFEEI    
Sbjct: 497 GLIAASLNGGHVDDCMAIFQYMKDKCDPNIGTANMMLKVYGRNDMFSEAKELFEEIV--- 556

Query: 553 GRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGYRLDHSKHAMLLVE 612
                S     LVP+EYTY  MLEA+A +LQWEYFE+VY+ M LSGY++D +KHA +L+E
Sbjct: 557 -----SRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKHASMLIE 616

Query: 613 ASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNYEQAVTLVRTMGYAPFQVS 672
           ASRAGKW LL+HAFD +LEDG+IPHPL FTE++   T +G++++A+TL+ T+  A FQ+S
Sbjct: 617 ASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLINTVALASFQIS 676

Query: 673 ERQWTELFEGNMDRICWNSLKKLSDALSDCD-ASEATVSNLSRSLQSLC 717
           E +WT+LFE + D +  ++L KLSD L +CD  SE TVSNLS+SL+S C
Sbjct: 677 EEEWTDLFEEHQDWLTQDNLHKLSDHLIECDYVSEPTVSNLSKSLKSRC 707

[Close]

BLAST of ClCG01G017610 vs. TAIR10
Match: AT1G30610.1 (AT1G30610.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 261.2 bits (666), Expect = 2.3e-69
Identity = 159/481 (33.06%), Postives = 249/481 (51.77%), Query Frame = 1


Query: 187 IRFLVDRLSSKPISMRDWKFSKMMIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVY 246
           I  L   L+   I+M +W+FSK +  + +++ +  +++++  LG  G W++ L V+EW+ 
Sbjct: 437 IEKLAKVLNGADINMPEWQFSKAIRSAKIRYTDYTVMRLIHFLGKLGNWRRVLQVIEWLQ 496

Query: 247 NLKSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQA 306
               +   K R +YT  L VLG +R+P EAL +F+ M      YPDM AY SIAVTLGQA
Sbjct: 497 RQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMVAYRSIAVTLGQA 556

Query: 307 GLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVF 366
           G +K+L  VI+ MR  P KK +    + WDP +EPD+V+YNA+LNAC+   +W+G +WV 
Sbjct: 557 GHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVL 616

Query: 367 TQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEE 426
            QL++ G +P+  TYGL MEVML   KY  +H+ F KM+KS     A  YRVLV   W+E
Sbjct: 617 QQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKS-SIPNALAYRVLVNTLWKE 676

Query: 427 GNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVT 486
           G  + A+  V DME RG+VGSA++YY+LA CLC  GR  + L        ++ + P+V+ 
Sbjct: 677 GKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGL------NMVNFVNPVVLK 736

Query: 487 FTGMILSSFDGGHIDDCISIFEYIKQKC----VPNIGTINTMLKVYGRNDMFSKAKDLFE 546
               ++   D  H     +I   +K+ C     P + T   +++    +     A  +F+
Sbjct: 737 LIENLIYKADLVH-----TIQFQLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFD 796

Query: 547 EIKRKAGRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGYRLDHSK- 606
           ++K+           P+LV    T   ML+A      +E    ++++M+  G  + +S  
Sbjct: 797 QMKKVCS--------PNLV----TCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSD 856

Query: 607 -----------HAMLLVEASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNY 652
                         +L   +   KW    +A+  +L  G   +      M+L+ +  G  
Sbjct: 857 FESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKE 893

HSP 2 Score: 146.7 bits (369), Expect = 6.4e-35
Identity = 112/457 (24.51%), Postives = 210/457 (45.95%), Query Frame = 1


Query: 269  MARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIECMRQQPSKKVR 328
            M   P++  K   L + D ++ PD+  Y+++     Q    +    V++ ++Q+  K   
Sbjct: 569  MRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQK--- 628

Query: 329  NKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVM 388
                        P  V Y  I+   +   ++  V+  F +++KS + PN   Y + +  +
Sbjct: 629  ------------PSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSI-PNALAYRVLVNTL 688

Query: 389  LKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSA 448
             K GK ++       M+  G    A  Y  L +     G  N  +  V  +         
Sbjct: 689  WKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMVNFVNP------- 748

Query: 449  SVYYELACCLCYNGRWQDAL-VEVEKMKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIF 508
             V  +L   L Y       +  +++K+  +++ KPLVVT+TG+I +  D G+I +   IF
Sbjct: 749  -VVLKLIENLIYKADLVHTIQFQLKKICRVAN-KPLVVTYTGLIQACVDSGNIKNAAYIF 808

Query: 509  EYIKQKCVPNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKAGRSSNSSAVPS-LVPDEYT 568
            + +K+ C PN+ T N MLK Y +  +F +A++LF+++        NSS   S ++PD YT
Sbjct: 809  DQMKKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYT 868

Query: 569  YGSMLEAAASALQWEYFENVYREMALSGYRLDHSKHAMLLVEASRAGKWYLLDHAFDTIL 628
            + +ML+  A   +W+ F   YREM   GY  +  +H  +++EASRAGK  +++  ++ + 
Sbjct: 869  FNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMR 928

Query: 629  EDGQIPHPLLFTEMILQLTTQGNYEQAVTLVRTMGYAPFQVSERQW-TELFEGNMDRICW 688
               +IP   L  E   +   +G++  A++ +  +     +   R + T  +   + R   
Sbjct: 929  RSNRIPPSPLIKERFFRKLEKGDHISAISSLADLNGKIEETELRAFSTSAWSRVLSRFEQ 988

Query: 689  NSLKKLSDAL-----SDCDASEATVSNLSRSLQSLCK 718
            +S+ +L D +     S  ++S++ + NL  S +   K
Sbjct: 989  DSVLRLMDDVNRRLGSRSESSDSVLGNLLSSCKDYLK 1000

[Close]

BLAST of ClCG01G017610 vs. TAIR10
Match: AT5G02860.1 (AT5G02860.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 116.7 bits (291), Expect = 7.1e-26
Identity = 99/419 (23.63%), Postives = 177/419 (42.24%), Query Frame = 1


Query: 225 ILDALGAKGCWKQALSVVEWVYNLKSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMR 284
           I+  LG +G   +  S       L+        + YT L++    + + +EA+ +F  M 
Sbjct: 179 IISMLGKEG---RVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKME 238

Query: 285 GDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLV 344
            DG   P +  Y+ I    G+ G               P  K+ +   K     + PD  
Sbjct: 239 EDG-CKPTLITYNVILNVFGKMGT--------------PWNKITSLVEKMKSDGIAPDAY 298

Query: 345 IYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKM 404
            YN ++  C      +    VF +++ +G   +  TY   ++V  KS + ++  K+  +M
Sbjct: 299 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 358

Query: 405 KKSGETLKANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRW 464
             +G +    TY  L+ A+  +G ++ A+E    M ++G       Y  L       G+ 
Sbjct: 359 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 418

Query: 465 QDALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYIKQKCV-PNIGTINT 524
           + A+   E+M+     KP + TF   I    + G   + + IF+ I    + P+I T NT
Sbjct: 419 ESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNT 478

Query: 525 MLKVYGRNDMFSKAKDLFEEIKRKAGRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYF 584
           +L V+G+N M S+   +F+E+KR              VP+  T+ +++ A +    +E  
Sbjct: 479 LLAVFGQNGMDSEVSGVFKEMKR-----------AGFVPERETFNTLISAYSRCGSFEQA 538

Query: 585 ENVYREMALSGYRLDHSKHAMLLVEASRAGKWYLLDHAFDTILEDGQI-PHPLLFTEMI 642
             VYR M  +G   D S +  +L   +R G W   +      +EDG+  P+ L +  ++
Sbjct: 539 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL-AEMEDGRCKPNELTYCSLL 566

HSP 2 Score: 93.2 bits (230), Expect = 8.4e-19
Identity = 82/404 (20.30%), Postives = 162/404 (40.10%), Query Frame = 1


Query: 258 FVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIE 317
           F YT LL+    A K + A+ IF  MR  G   P++  +++     G  G   +++K+ +
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAG-CKPNICTFNAFIKMYGNRGKFTEMMKIFD 444

Query: 318 CMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPN 377
            +         N C       + PD+V +N +L           V  VF +++++G  P 
Sbjct: 445 EI---------NVC------GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 504

Query: 378 GATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEEGNVNGAIEAVR 437
             T+   +    + G +EQ   ++ +M  +G T   +TY  ++ A    G    + + + 
Sbjct: 505 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 564

Query: 438 DMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFTGMILSSFDG 497
           +ME      +   Y  L      NG+    +  + +      ++P  V    ++L     
Sbjct: 565 EMEDGRCKPNELTYCSLLHAYA-NGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKC 624

Query: 498 GHIDDCISIFEYIKQKCV-PNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKAGRSSNSSA 557
             + +    F  +K++   P+I T+N+M+ +YGR  M +KA  + + +K +         
Sbjct: 625 DLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER--------- 684

Query: 558 VPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGYRLDHSKHAMLLVEASRAGKWY 617
                P   TY S++   + +  +   E + RE+   G + D   +  ++    R  +  
Sbjct: 685 --GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMR 744

Query: 618 LLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNYEQAVTLVRTM 661
                F  +   G +P  + +   I        +E+A+ +VR M
Sbjct: 745 DASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYM 760

[Close]

BLAST of ClCG01G017610 vs. TAIR10
Match: AT5G01110.1 (AT5G01110.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 90.9 bits (224), Expect = 4.2e-18
Identity = 94/399 (23.56%), Postives = 166/399 (41.60%), Query Frame = 1


Query: 210 MIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYN-LKSHSHFKSRFVYTKLLAVLG 269
           M+RSGL  +      +L     + C K  +   E V++ ++S         ++ ++++  
Sbjct: 331 MLRSGLSPDSTTYRSLL----MEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFT 390

Query: 270 MARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIECMRQQPSKKVR 329
            +    +AL  FN ++  G I PD   Y  +     + G++   + +   M QQ      
Sbjct: 391 RSGNLDKALMYFNSVKEAGLI-PDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ------ 450

Query: 330 NKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVM 389
                        D+V YN IL+             +F ++ +  L P+  T  + ++  
Sbjct: 451 ---------GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGH 510

Query: 390 LKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSA 449
            K G  +   +LF KMK+    L   TY  L+  F + G+++ A E   DM  + ++ + 
Sbjct: 511 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 570

Query: 450 SVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFE 509
             Y  L   LC  G   +A    ++M +  ++KP V+    MI      G+  D  S  E
Sbjct: 571 ISYSILVNALCSKGHLAEAFRVWDEMIS-KNIKPTVMICNSMIKGYCRSGNASDGESFLE 630

Query: 510 -YIKQKCVPNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKAGRSSNSSAVPSLVPDEYTY 569
             I +  VP+  + NT++  + R +  SKA  L ++++ + G          LVPD +TY
Sbjct: 631 KMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG---------GLVPDVFTY 690

Query: 570 GSMLEAAASALQWEYFENVYREMALSGYRLDHSKHAMLL 607
            S+L       Q +  E V R+M   G   D S +  ++
Sbjct: 691 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMI 699

HSP 2 Score: 84.3 bits (207), Expect = 3.9e-16
Identity = 88/416 (21.15%), Postives = 170/416 (40.87%), Query Frame = 1


Query: 259 VYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIE- 318
           V+  L+     ARK +EA + F L+R  G     + A +++  +L + G ++    V + 
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKG-FTVSIDACNALIGSLVRIGWVELAWGVYQE 226

Query: 319 -------------------CMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLE 378
                                +    +KV     +  +  V PD+V YN +++A      
Sbjct: 227 ISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGL 286

Query: 379 WKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYRV 438
            +  + +   +   G  P   TY   +  + K GKYE+  ++F +M +SG +  + TYR 
Sbjct: 287 MEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRS 346

Query: 439 LVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLS 498
           L+    ++G+V    +   DM  R VV     +  +      +G    AL+    +K  +
Sbjct: 347 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKE-A 406

Query: 499 HMKPLVVTFTGMILSSFDGGHIDDCISI-FEYIKQKCVPNIGTINTMLKVYGRNDMFSKA 558
            + P  V +T +I      G I   +++  E ++Q C  ++ T NT+L    +  M  +A
Sbjct: 407 GLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEA 466

Query: 559 KDLFEEIKRKAGRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGYRL 618
             LF E+  +A           L PD YT   +++        +    ++++M     RL
Sbjct: 467 DKLFNEMTERA-----------LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRL 526

Query: 619 DHSKHAMLLVEASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNYEQA 654
           D   +  LL    + G        +  ++    +P P+ ++ ++  L ++G+  +A
Sbjct: 527 DVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEA 569

[Close]

BLAST of ClCG01G017610 vs. TAIR10
Match: AT1G74850.1 (AT1G74850.1 plastid transcriptionally active 2)

HSP 1 Score: 90.1 bits (222), Expect = 7.1e-18
Identity = 79/336 (23.51%), Postives = 141/336 (41.96%), Query Frame = 1


Query: 260 YTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIECM 319
           Y  LL+   +     EA  +F  M  DG I PD+  Y  +  T G+   L++L KV + +
Sbjct: 250 YNTLLSACAIRGLGDEAEMVFRTMN-DGGIVPDLTTYSHLVETFGK---LRRLEKVCDLL 309

Query: 320 RQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGA 379
            +  S                PD+  YN +L A   +   K    VF Q++ +G  PN  
Sbjct: 310 GEMASG------------GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNAN 369

Query: 380 TYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEEGNVNGAIEAVRDM 439
           TY + + +  +SG+Y+ + +LF +MK S     A TY +L++ F E G     +    DM
Sbjct: 370 TYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 429

Query: 440 EQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGH 499
            +  +      Y  +       G  +DA   ++ M T + + P    +TG+I +      
Sbjct: 430 VEENIEPDMETYEGIIFACGKGGLHEDARKILQYM-TANDIVPSSKAYTGVIEAFGQAAL 489

Query: 500 IDDCISIFEYIKQ-KCVPNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKAGRSSNSSAVP 559
            ++ +  F  + +    P+I T +++L  + R  +  +++ +             S  V 
Sbjct: 490 YEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAIL------------SRLVD 549

Query: 560 SLVP-DEYTYGSMLEAAASALQWEYFENVYREMALS 594
           S +P +  T+ + +EA     ++E     Y +M  S
Sbjct: 550 SGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKS 556

HSP 2 Score: 86.7 bits (213), Expect = 7.9e-17
Identity = 84/439 (19.13%), Postives = 182/439 (41.46%), Query Frame = 1


Query: 210 MIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYN---LKSHSHFKSRFVYTKLLAV 269
           + ++ L  N+  L  +      +G W+++L + +++      K + H     +YT ++++
Sbjct: 98  IFKNKLSLNDFAL--VFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEH-----IYTIMISL 157

Query: 270 LGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIECMRQQPSKK 329
           LG      + L++F+ M   G +   + +Y ++    G+ G  +  L++++ M+ +    
Sbjct: 158 LGREGLLDKCLEVFDEMPSQG-VSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK--- 217

Query: 330 VRNKCRKSWDPAVEPDLVIYNAILNACIPT-LEWKGVYWVFTQLRKSGLRPNGATYGLSM 389
                       + P ++ YN ++NAC    L+W+G+  +F ++R  G++P+  TY   +
Sbjct: 218 ------------ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLL 277

Query: 390 EVMLKSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVV 449
                 G  ++   +F  M   G      TY  LV+ F +   +    + + +M   G +
Sbjct: 278 SACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL 337

Query: 450 GSASVYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGHIDDCIS 509
              + Y  L      +G  ++A+    +M+  +   P   T++ ++      G  DD   
Sbjct: 338 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQA-AGCTPNANTYSVLLNLFGQSGRYDDVRQ 397

Query: 510 IFEYIKQKCV-PNIGTINTMLKVYGRNDMFSKAKDLFEEIKRKAGRSSNSSAVPSLVPDE 569
           +F  +K     P+  T N +++V+G    F +   LF ++  +           ++ PD 
Sbjct: 398 LFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE-----------NIEPDM 457

Query: 570 YTYGSMLEAAASALQWEYFENVYREMALSGYRLDHSKHAMLLVEASRAGKWYLLDHAFDT 629
            TY  ++ A       E    + + M  +        +  ++    +A  +     AF+T
Sbjct: 458 ETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNT 501

Query: 630 ILEDGQIP-----HPLLFT 639
           + E G  P     H LL++
Sbjct: 518 MHEVGSNPSIETFHSLLYS 501

HSP 3 Score: 45.8 bits (107), Expect = 1.5e-04
Identity = 59/318 (18.55%), Postives = 114/318 (35.85%), Query Frame = 1


Query: 210 MIRSGLQFNEGQLLKILDALGAKGCWKQALSVVEWVYNLKSHSHFKSRFVYTKLLAVLGM 269
           M  +G   N      +L+  G  G +     V +    +KS +       Y  L+ V G 
Sbjct: 343 MQAAGCTPNANTYSVLLNLFGQSGRYDD---VRQLFLEMKSSNTDPDAATYNILIEVFGE 402

Query: 270 ARKPQEALKIFNLMRGDGQIYPDMAAYHSIAVTLGQAGLLKQLLKVIECMRQQPSKKVRN 329
               +E + +F+ M  +  I PDM  Y  I    G+ GL +   K+++ M          
Sbjct: 403 GGYFKEVVTLFHDMVEEN-IEPDMETYEGIIFACGKGGLHEDARKILQYMTAND------ 462

Query: 330 KCRKSWDPAVEPDLVIYNAILNACIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVML 389
                    + P    Y  ++ A      ++     F  + + G  P+  T+   +    
Sbjct: 463 ---------IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFA 522

Query: 390 KSGKYEQLHKLFTKMKKSGETLKANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSAS 449
           + G  ++   + +++  SG     +T+   ++A+ + G    A++   DME+        
Sbjct: 523 RGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDER 582

Query: 450 VYYELACCLCYNGRWQDALVEVEKMKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEY 509
               +     +     +   + E+MK  S + P ++ +  M+         DD   + E 
Sbjct: 583 TLEAVLSVYSFARLVDECREQFEEMKA-SDILPSIMCYCMMLAVYGKTERWDDVNELLEE 640

Query: 510 IKQKCVPNI-GTINTMLK 527
           +    V NI   I  M+K
Sbjct: 643 MLSNRVSNIHQVIGQMIK 640

[Close]

BLAST of ClCG01G017610 vs. NCBI nr
Match: gi|659079705|ref|XP_008440398.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g67570, chloroplastic [Cucumis melo])

HSP 1 Score: 1533.9 bits (3970), Expect = 0.0e+00
Identity = 767/866 (88.57%), Postives = 810/866 (93.53%), Query Frame = 1


Query: 1   MEALSRNAPIPSPKFEPDTDKIKRTLLQKGVRPTPKVVRSLRKKEIQKHNRKLKRLAQRQ 60
           MEAL+ NAPIPSPKFEPDTDKIKR LLQKGV PTP++VRSLRKKEIQK+NRKLKRLA+RQ
Sbjct: 1   MEALNSNAPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRLAERQ 60

Query: 61  ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120
           +DQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVN  EL
Sbjct: 61  SDQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFNEL 120

Query: 121 TGFRTGYNRDNLKKESLRELRKLFEARKLEELQWALDDDVELKEEWLESENGHCDAVKRR 180
           TG RTGYNRD+LKKESLRELRKLFE RKLEEL+WALDDDVELKEEWL+SENG  DAVKRR
Sbjct: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEELEWALDDDVELKEEWLQSENGQYDAVKRR 180

Query: 181 RGDAEVIRFLVDRLSSKPISMRDWKFSKMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
           RGD EVIRFLVDRLSS PISMRDWKFS+MMIRSGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240

Query: 241 VVEWVYNLKSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIA 300
           VVEWVYNLKSHSH KSRFVYTKLLAVLGMARKPQEAL+IFNLMRGDGQIYPDMAAYHSIA
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300

Query: 301 VTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360
           VTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYN ILNACIPTLEWK
Sbjct: 301 VTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNTILNACIPTLEWK 360

Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYRVLV 420
           GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLH LFTKMKKSGETLKANTYRVLV
Sbjct: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKSGETLKANTYRVLV 420

Query: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHM 480
           KAFWEEGN +GAIEAVRDMEQRGVVGSASVYYELACCLCYNG+WQDALVEVEKMKTLSHM
Sbjct: 421 KAFWEEGNADGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480

Query: 481 KPLVVTFTGMILSSFDGGHIDDCISIFEYIKQKCVPNIGTINTMLKVYGRNDMFSKAKDL 540
           KPLVVTFTGMILSSF+GGHIDDCISIFEY+KQ C PNIGTINTMLKVYGRNDMFSKAKDL
Sbjct: 481 KPLVVTFTGMILSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMFSKAKDL 540

Query: 541 FEEIKRKAGRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGYRLDHS 600
           FEEIK+KA  SS++SAVPSL+PDEYTY SML+AAAS+LQWEYFENVYREMALSGYRLD S
Sbjct: 541 FEEIKKKADSSSHNSAVPSLLPDEYTYASMLQAAASSLQWEYFENVYREMALSGYRLDQS 600

Query: 601 KHAMLLVEASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNYEQAVTLVRTM 660
           KHA+LLVEAS+AGKWYLLDHAFDTILE GQIPHPLLFTEMILQLTTQ NYEQAVTLVRTM
Sbjct: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQENYEQAVTLVRTM 660

Query: 661 GYAPFQVSERQWTELFEGNMDRICWNSLKKLSDALSDCDASEATVSNLSRSLQSLCKLDI 720
           GYAPFQVSERQWTELFEGN DRIC N+LK+L DAL DCDASEATVSNLSRSLQSLCK  I
Sbjct: 661 GYAPFQVSERQWTELFEGNKDRICRNNLKQLLDALGDCDASEATVSNLSRSLQSLCKFGI 720

Query: 721 PENTSQFVASDHDATDGLQLPGSEIMQNMELHPDRVSDCCDKSLDITPVNSHASLNMKIK 780
            E+TSQ +A D +ATDGL+LP S+ M+NM+LHPD+     D+SLDI PV+ HASLNMK+ 
Sbjct: 721 LESTSQSIACDLNATDGLKLPDSKNMENMKLHPDQ-----DESLDIIPVD-HASLNMKVN 780

Query: 781 SDSKMSSWSPSISEGVLRTDEFSDRSNNELSTFVLCDDNEDDEEELNMLLDEFDDSYDSN 840
           S+S MS WSPSIS+GVL T +FSD SNNE STF   D++EDDE ELNMLLD FDDSYDSN
Sbjct: 781 SESNMSPWSPSISDGVLGTGQFSDSSNNEHSTFDSWDESEDDEVELNMLLDGFDDSYDSN 840

Query: 841 LPSVNEILKTWKEERKTDGLFLHPLN 867
           LP+ NEIL+TWKEERK DGLFLHPLN
Sbjct: 841 LPAANEILETWKEERKADGLFLHPLN 860

[Close]

BLAST of ClCG01G017610 vs. NCBI nr
Match: gi|449448456|ref|XP_004141982.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g67570, chloroplastic [Cucumis sativus])

HSP 1 Score: 1523.8 bits (3944), Expect = 0.0e+00
Identity = 766/866 (88.45%), Postives = 803/866 (92.73%), Query Frame = 1


Query: 1   MEALSRNAPIPSPKFEPDTDKIKRTLLQKGVRPTPKVVRSLRKKEIQKHNRKLKRLAQRQ 60
           MEAL+ N PIPSPKFEPDTDKIKR LLQKGV PTP++VRSLRKKEIQK+NRKLKR+A+RQ
Sbjct: 1   MEALNSNTPIPSPKFEPDTDKIKRMLLQKGVYPTPRIVRSLRKKEIQKYNRKLKRVAERQ 60

Query: 61  ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNLKEL 120
           + QSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVN KEL
Sbjct: 61  SAQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGGLMVGRPWERLERVNFKEL 120

Query: 121 TGFRTGYNRDNLKKESLRELRKLFEARKLEELQWALDDDVELKEEWLESENGHCDAVKRR 180
           TG RTGYNRD+LKKESLRELRKLFE RKLEE QWALDDDVELKEEWLESEN   D VKRR
Sbjct: 121 TGVRTGYNRDSLKKESLRELRKLFETRKLEESQWALDDDVELKEEWLESENDRYDVVKRR 180

Query: 181 RGDAEVIRFLVDRLSSKPISMRDWKFSKMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240
           RGD EVIRFLVDRLSS PISMRDWKFS+MMIRSGLQFNEGQLLKILDALGAKGCWKQALS
Sbjct: 181 RGDGEVIRFLVDRLSSGPISMRDWKFSRMMIRSGLQFNEGQLLKILDALGAKGCWKQALS 240

Query: 241 VVEWVYNLKSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYHSIA 300
           VVEWVYNLKSHSH KSRFVYTKLLAVLGMARKPQEAL+IFNLMRGDGQIYPDMAAYHSIA
Sbjct: 241 VVEWVYNLKSHSHSKSRFVYTKLLAVLGMARKPQEALQIFNLMRGDGQIYPDMAAYHSIA 300

Query: 301 VTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360
           VTLGQAGLLKQLLKVIE MRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK
Sbjct: 301 VTLGQAGLLKQLLKVIEFMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTLEWK 360

Query: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYRVLV 420
           GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLH LFTKMKK+G+TLKANTYRVLV
Sbjct: 361 GVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHNLFTKMKKNGQTLKANTYRVLV 420

Query: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTLSHM 480
           KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNG+WQDALVEVEKMKTLSHM
Sbjct: 421 KAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGKWQDALVEVEKMKTLSHM 480

Query: 481 KPLVVTFTGMILSSFDGGHIDDCISIFEYIKQKCVPNIGTINTMLKVYGRNDMFSKAKDL 540
           KPLVVTFTGMI SSF+GGHIDDCISIFEY+KQ C PNIGTINTMLKVYGRNDM+SKAKDL
Sbjct: 481 KPLVVTFTGMISSSFNGGHIDDCISIFEYMKQICAPNIGTINTMLKVYGRNDMYSKAKDL 540

Query: 541 FEEIKRKAGRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGYRLDHS 600
           FEEIKRKA  SS+ SAVPSLVPDEYTY SMLEAAAS+LQWEYFE+VYREMALSGY+LD S
Sbjct: 541 FEEIKRKADSSSHDSAVPSLVPDEYTYASMLEAAASSLQWEYFESVYREMALSGYQLDQS 600

Query: 601 KHAMLLVEASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNYEQAVTLVRTM 660
           KHA+LLVEAS+AGKWYLLDHAFDTILE GQIPHPLLFTEMILQLTTQ NYEQAVTLVRTM
Sbjct: 601 KHALLLVEASKAGKWYLLDHAFDTILEAGQIPHPLLFTEMILQLTTQDNYEQAVTLVRTM 660

Query: 661 GYAPFQVSERQWTELFEGNMDRICWNSLKKLSDALSDCDASEATVSNLSRSLQSLCKLDI 720
           GYAPFQVSERQWTELFEGN DRI  N+LK+L  AL DCDASEATVSNLSRSLQSLCK DI
Sbjct: 661 GYAPFQVSERQWTELFEGNTDRIRRNNLKQLLHALGDCDASEATVSNLSRSLQSLCKFDI 720

Query: 721 PENTSQFVASDHDATDGLQLPGSEIMQNMELHPDRVSDCCDKSLDITPVNSHASLNMKIK 780
           PENTSQ VA DHDATD LQLP SE M+NM+LHPD      D+SLDI PV+ HASLNMK+ 
Sbjct: 721 PENTSQSVACDHDATDELQLPDSENMENMKLHPDE-----DESLDIIPVD-HASLNMKVN 780

Query: 781 SDSKMSSWSPSISEGVLRTDEFSDRSNNELSTFVLCDDNEDDEEELNMLLDEFDDSYDSN 840
           S+SKMS WS SIS+G L T +FSD SNN  S F LC ++EDDEEELN LLDEFDD+YDSN
Sbjct: 781 SESKMSPWSVSISDGALGTGQFSDGSNNVHSPFDLCGESEDDEEELNTLLDEFDDAYDSN 840

Query: 841 LPSVNEILKTWKEERKTDGLFLHPLN 867
           LP+VNEIL+TWKEERK DGLFLH LN
Sbjct: 841 LPAVNEILETWKEERKADGLFLHSLN 860

[Close]

BLAST of ClCG01G017610 vs. NCBI nr
Match: gi|595822726|ref|XP_007204940.1| (hypothetical protein PRUPE_ppa001240mg [Prunus persica])

HSP 1 Score: 1002.3 bits (2590), Expect = 5.3e-289
Identity = 532/879 (60.52%), Postives = 642/879 (73.04%), Query Frame = 1


Query: 1   MEALSRNAP-IPSPKFEPDTDKIKRTLLQKGVRPTPKVVRSLRKKEIQKHNRKLKRLAQR 60
           MEAL  + P +P  KFEPDTDKIKR L   GV PTPK+V ++RKKEIQKHNRKL RLA+ 
Sbjct: 1   MEALQGSLPQLPHTKFEPDTDKIKRRLNNGGVYPTPKIVHTIRKKEIQKHNRKLNRLAKA 60

Query: 61  QADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGG-LMVGRPWERLERVNLK 120
               SPPLS+SQKQ +A+ETHF TL+ EY++F+KA++AK   G  MVGRPWE +ER+  +
Sbjct: 61  DPS-SPPLSQSQKQALADETHFQTLKREYRDFTKAVKAKTGDGESMVGRPWEGIERIGFR 120

Query: 121 ELTGFRTGYNRDNLKKESLRELRKLFEARKLEELQWALDDDVELKEEWLESENGHCDAVK 180
           EL      Y  + LKKE L+ LR++FEARKLE+L+W LDDD+ELKE+W++ EN   D  K
Sbjct: 121 ELASTSAEYGGEKLKKEELKALREMFEARKLEDLKWVLDDDIELKEDWMDGENRVWDPAK 180

Query: 181 R-RRGDAEVIRFLVDRLSSKPISMRDWKFSKMMIRSGLQFNEGQLLKILDALGAKGCWKQ 240
           R RRG+ EVI+FLVDRLS+   SM+DWK SKMM +SGLQF EGQ+LKIL  LGAKGCWK 
Sbjct: 181 RRRRGEGEVIQFLVDRLSATEFSMKDWKLSKMMKQSGLQFTEGQMLKILGGLGAKGCWKH 240

Query: 241 ALSVVEWVYNLKSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYH 300
           +L+VVEWVYN K + H KSRFVYTKLLA+LG AR+PQEAL IFNLM GD  IYPD AAYH
Sbjct: 241 SLAVVEWVYNDKGNKHCKSRFVYTKLLAILGKARRPQEALHIFNLMLGDFHIYPDAAAYH 300

Query: 301 SIAVTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTL 360
           SI VTLGQ GLLK+LLK+IE MRQ+P +  +N   K+WDP VEPD+++YNA+LNAC  + 
Sbjct: 301 SITVTLGQTGLLKELLKIIESMRQRPFRSNKNMFPKNWDPVVEPDVIVYNALLNACTQSH 360

Query: 361 EWKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYR 420
           +WKGV WVF QLRKSGL+PNGATYGL+MEVML+SGKY+ +H+LF KMK SGE  KA  Y+
Sbjct: 361 QWKGVSWVFNQLRKSGLKPNGATYGLAMEVMLQSGKYDLVHELFRKMKNSGEAPKALNYK 420

Query: 421 VLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTL 480
           VLV+AFW EG VN A+EAVRDMEQRGVVG+ SVYYELACCLC NGRWQDALVEVEKMK +
Sbjct: 421 VLVRAFWCEGKVNEAVEAVRDMEQRGVVGTGSVYYELACCLCNNGRWQDALVEVEKMKNV 480

Query: 481 SHMKPLVVTFTGMILSSFDGGHIDDCISIFEYIKQKCVPNIGTINTMLKVYGRNDMFSKA 540
           S+ KPL VTFTGMI SS +GGHID CISIF+++K +C PNIGTINTMLKV+GR+DMF KA
Sbjct: 481 SNTKPLEVTFTGMITSSMEGGHIDSCISIFKHMKNRCAPNIGTINTMLKVFGRSDMFFKA 540

Query: 541 KDLFEEIKRKAGRS--SNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGY 600
           K+LFEEIK     S  S       +VPD+YTY SML+A+ASALQWEYFE VY+EMALSGY
Sbjct: 541 KELFEEIKTVRAESDFSLEGGGTLVVPDQYTYTSMLKASASALQWEYFEYVYKEMALSGY 600

Query: 601 RLDHSKHAMLLVEASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNYEQAVT 660
           ++D +KHA LLV+ASR+GK+YLL+HAFDT LE G+IPHPL+FTEM+ Q T Q +Y++AVT
Sbjct: 601 QVDQTKHASLLVKASRSGKFYLLEHAFDTSLEAGEIPHPLIFTEMVFQATAQHDYKRAVT 660

Query: 661 LVRTMGYAPFQVSERQWTELFEGNMDRICWNSLKKLSDALSDCD-ASEATVSNLSRSLQS 720
           LV  M YAPFQVSERQWT+LFE N D I  + L+KL DAL +CD  SEATV NLSRSL  
Sbjct: 661 LVNAMAYAPFQVSERQWTDLFEKNGDTITQDGLEKLLDALHNCDVVSEATVLNLSRSLLR 720

Query: 721 LCKLDIPENTSQFVASDHDAT-------DGLQLPGSEIMQNMEL------HPDRVSDCCD 780
           LC+       S        AT       D  ++ G+ IM N  L      H  R  +  D
Sbjct: 721 LCRSYRSRGLSSSAPFGSGATETSSLDGDNEEIYGNGIMPNHSLESIDGSHNPR-REPLD 780

Query: 781 KS----LDITPVNSHASLNMKIKSDSKMSSWSPSISEGVLRTDEFSDRSNNELSTFVLCD 840
           KS    LD   VN HAS    +            ++  V R+ E+    + E ST     
Sbjct: 781 KSTNVPLDAFSVN-HASTRRDV----------DEVTRTVSRSSEYISDEDGEYST----- 840

Query: 841 DNEDDEEELNMLLDEFDDSYDSNLPSVNEILKTWKEERK 857
             E D+E   ++  + DDS+DS+LPS  EILK WKE RK
Sbjct: 841 --EIDKEIEALIYKDVDDSHDSDLPSAPEILKVWKERRK 859

[Close]

BLAST of ClCG01G017610 vs. NCBI nr
Match: gi|645219901|ref|XP_008237850.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g67570, chloroplastic [Prunus mume])

HSP 1 Score: 993.8 bits (2568), Expect = 1.9e-286
Identity = 528/882 (59.86%), Postives = 640/882 (72.56%), Query Frame = 1


Query: 1   MEALSRNAP-IPSPKFEPDTDKIKRTLLQKGVRPTPKVVRSLRKKEIQKHNRKLKRLAQR 60
           MEAL  + P +P  KFEPDTDKIKR L   G+ PTPK+V ++RKKEIQKHNRKL RLA+ 
Sbjct: 1   MEALQGSLPQLPHTKFEPDTDKIKRRLNNGGIYPTPKIVHTIRKKEIQKHNRKLNRLAKA 60

Query: 61  QADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPAGG-LMVGRPWERLERVNLK 120
               SPPLS SQKQ +A+ETHF TL+ EY+ F+KA++AK   G  MVGRPWE +ER+  +
Sbjct: 61  DPS-SPPLSLSQKQALADETHFQTLKREYRHFTKAVKAKTGDGESMVGRPWEGIERIGFR 120

Query: 121 ELTGFRTGYNRDNLKKESLRELRKLFEARKLEELQWALDDDVELKEEWLESENGHCDAVK 180
           EL      Y    LKKE L+ LR++FEARKLE+L+W LDDD+EL E+WL+ EN   D  K
Sbjct: 121 ELASTSAEYGGGKLKKEELKALREMFEARKLEDLKWVLDDDIELTEDWLDGENRVWDPAK 180

Query: 181 R-RRGDAEVIRFLVDRLSSKPISMRDWKFSKMMIRSGLQFNEGQLLKILDALGAKGCWKQ 240
           R RRG+ EVI+FLVDRLS+   SM+DWK SKMM +SGLQF EGQ+LKIL  LGAKGCWK 
Sbjct: 181 RRRRGEGEVIQFLVDRLSATEFSMKDWKLSKMMKQSGLQFTEGQMLKILGGLGAKGCWKH 240

Query: 241 ALSVVEWVYNLKSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDMAAYH 300
           +L+VVEWVYN K + H KSRFVYTKLLA+LG AR+PQEA+ IFNLM GD  IYPD AAYH
Sbjct: 241 SLAVVEWVYNDKGNKHCKSRFVYTKLLAILGKARRPQEAVHIFNLMLGDFHIYPDAAAYH 300

Query: 301 SIAVTLGQAGLLKQLLKVIECMRQQPSKKVRNKCRKSWDPAVEPDLVIYNAILNACIPTL 360
           SI VTLGQ GLLK+LLK+IE MRQ+P +  +N   K+WDP +EPD+++YNA+LNAC  + 
Sbjct: 301 SITVTLGQTGLLKELLKIIESMRQRPFRSNKNMFPKNWDPVIEPDVIVYNALLNACAQSH 360

Query: 361 EWKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLKANTYR 420
           +WKGV WVF QLRKSGL+PNGATYGL+MEVML+SGKY+ +H+LF KMK SGE  KA  Y+
Sbjct: 361 QWKGVSWVFNQLRKSGLKPNGATYGLAMEVMLQSGKYDLVHELFRKMKNSGEAPKALNYK 420

Query: 421 VLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVEKMKTL 480
           VLV+AFW EG VN A+EAVRDMEQRGVVG+ SVYYELACCLC NGRWQDALVEVEKMK +
Sbjct: 421 VLVRAFWCEGKVNEAVEAVRDMEQRGVVGTGSVYYELACCLCNNGRWQDALVEVEKMKNV 480

Query: 481 SHMKPLVVTFTGMILSSFDGGHIDDCISIFEYIKQKCVPNIGTINTMLKVYGRNDMFSKA 540
           S+ KPL VTFTGMI SS +GGHID CISIF+++K +C PN+GTINTMLKV+GR+DMF KA
Sbjct: 481 SNTKPLEVTFTGMITSSMEGGHIDSCISIFKHMKNRCAPNVGTINTMLKVFGRSDMFFKA 540

Query: 541 KDLFEEIK--RKAGRSSNSSAVPSLVPDEYTYGSMLEAAASALQWEYFENVYREMALSGY 600
           K+LFEEIK  R    SS       +VPD+YTY SML+A+ASALQWEYFE VY+EMALSGY
Sbjct: 541 KELFEEIKTLRAESDSSLEGGGTLVVPDQYTYTSMLKASASALQWEYFEYVYKEMALSGY 600

Query: 601 RLDHSKHAMLLVEASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGNYEQAVT 660
           ++D +KHA LLV+ASR+GK+YLL+HAFDT LE G+IPHPL+FTEM+ Q T Q +Y++AVT
Sbjct: 601 QVDQTKHASLLVKASRSGKFYLLEHAFDTSLEAGEIPHPLIFTEMVFQATAQHDYKRAVT 660

Query: 661 LVRTMGYAPFQVSERQWTELFEGNMDRICWNSLKKLSDALSDCD-ASEATVSNLSRSLQS 720
           LV  M +APFQVSERQWT+LFE N D I  + L+KL DAL +CD   EATV NLSRSL  
Sbjct: 661 LVNAMAHAPFQVSERQWTDLFEKNGDTITRDGLEKLLDALHNCDVVLEATVLNLSRSLLR 720

Query: 721 LCKLDIPENTSQFVASDHDAT-------DGLQLPGSEIMQNMEL------HPDRVSDCCD 780
           LC+       S        AT       D  ++ G+ IM N  L      H  R  +  D
Sbjct: 721 LCRSYRSRGLSSSAPFGSGATETSSLDGDNEEIYGNGIMPNHSLESIDGSHNPR-REPLD 780

Query: 781 KS----LDITPVNSHASLNMKIKSDSKMSSWSPSISEGVLRTDEFSDRSNNELSTFVLCD 840
           KS    LD   VN HAS    +           +++  V R+ ++    + E ST     
Sbjct: 781 KSTNVPLDAFSVN-HASTRRDV----------DAVTRTVSRSSDYISDEDGEYST----- 840

Query: 841 DNEDDEEELNMLLDEFDDSYDSNLPSVNEILKTWKEERKTDG 860
             E DEE   ++  + DDS+DS+LPS  EILK WKE RK  G
Sbjct: 841 --EIDEEIEALIYKDVDDSHDSDLPSAPEILKVWKERRKEAG 862

[Close]

BLAST of ClCG01G017610 vs. NCBI nr
Match: gi|1009145479|ref|XP_015890359.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g67570, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 981.9 bits (2537), Expect = 7.4e-283
Identity = 513/898 (57.13%), Postives = 644/898 (71.71%), Query Frame = 1


Query: 1   MEALSRNAPIPSPKFEPDTDKIKRTLLQKGVRPTPKVVRSLRKKEIQKHNRKLKRLAQRQ 60
           MEAL     IP P+FEPD +KIKR L+ K V PTPK++ +LRKKEIQKHNRKLKRLA R 
Sbjct: 1   MEALQGAPQIPPPQFEPDIEKIKRKLINKSVNPTPKIIHTLRKKEIQKHNRKLKRLADRA 60

Query: 61  ADQSPPLSESQKQLIAEETHFLTLRSEYKEFSKAIEAKPA-------GGLMVGRPWERLE 120
           +   PPL+E Q+Q + EE HF  L+ EYK+FSKA++AK         G  MVG PW++LE
Sbjct: 61  S--YPPLTEPQEQALDEEFHFQRLKREYKDFSKAVKAKTGAAAGNGDGASMVGMPWQKLE 120

Query: 121 RVNLKELTGFRTGYNRDNLKKESLRELRKLFEARKLEELQWALDDDVELKEEWLESENGH 180
           RV  +EL      Y  + LK+E LR+L+++FE+RK EELQW LDDD+E+KEEW + E   
Sbjct: 121 RVGFRELASASNEYKGEKLKREELRDLKEMFESRKREELQWVLDDDIEIKEEWFDGEQRA 180

Query: 181 CDAVKRRRGDAEVIRFLVDRLSSKPISMRDWKFSKMMIRSGLQFNEGQLLKILDALGAKG 240
            D +KRRR + E IRFL+DRLS   +S RDWK S+MM +SGLQF E Q+LKI++ LGAKG
Sbjct: 181 WDPLKRRRSEVETIRFLLDRLSGLELSRRDWKLSRMMKKSGLQFTEKQMLKIVEGLGAKG 240

Query: 241 CWKQALSVVEWVYNLKSHSHFKSRFVYTKLLAVLGMARKPQEALKIFNLMRGDGQIYPDM 300
           CW+QA+SVV+WVY+ +     KSRFVYTKLLA+LG AR+P+EAL IFNLMR D  IYPDM
Sbjct: 241 CWQQAMSVVDWVYDDRDKRQNKSRFVYTKLLAILGKARRPREALDIFNLMRRDCSIYPDM 300

Query: 301 AAYHSIAVTLGQAGLLKQLLKVIECMRQQPSKKVRNKCR-KSWDPAVEPDLVIYNAILNA 360
           AAY SIAVTLGQAG LK+L+ +IECM+Q+PSK+ +N  R K+W+P +EPDLV+YNA+LNA
Sbjct: 301 AAYRSIAVTLGQAGHLKELVNIIECMKQKPSKRTKNIIRYKNWNPVLEPDLVVYNAVLNA 360

Query: 361 CIPTLEWKGVYWVFTQLRKSGLRPNGATYGLSMEVMLKSGKYEQLHKLFTKMKKSGETLK 420
           C+P+ +WKGV WVF QLRKSGL+PN A+YGL+MEVML+SGK++ +H+ F KMKKSGE   
Sbjct: 361 CVPSHQWKGVSWVFDQLRKSGLKPNAASYGLAMEVMLQSGKFDLVHEFFRKMKKSGEAPT 420

Query: 421 ANTYRVLVKAFWEEGNVNGAIEAVRDMEQRGVVGSASVYYELACCLCYNGRWQDALVEVE 480
           A TYRVLV+AFW EG VN A+EAVRDMEQRGVVG++SVYYELACCLC  GRWQDA+VEV 
Sbjct: 421 ALTYRVLVRAFWGEGKVNEAVEAVRDMEQRGVVGTSSVYYELACCLCCFGRWQDAMVEVG 480

Query: 481 KMKTLSHMKPLVVTFTGMILSSFDGGHIDDCISIFEYIKQKCVPNIGTINTMLKVYGRND 540
           KMK LS+ KPL VTFTGMI +S DGGHIDDCISIFE++K  C PNIGTINTML +YGRND
Sbjct: 481 KMKKLSNSKPLEVTFTGMIAASMDGGHIDDCISIFEHMKNHCAPNIGTINTMLNIYGRND 540

Query: 541 MFSKAKDLFEEIKRKAGRSSNSSAVPS---LVPDEYTYGSMLEAAASALQWEYFENVYRE 600
           MFSKAK LFEEIK+    SS+ S       L+PDEYTY SML+A+ASALQW+YFE VY+E
Sbjct: 541 MFSKAKKLFEEIKKVNPDSSHPSLDGEHNYLIPDEYTYSSMLKASASALQWDYFECVYKE 600

Query: 601 MALSGYRLDHSKHAMLLVEASRAGKWYLLDHAFDTILEDGQIPHPLLFTEMILQLTTQGN 660
           M LSGY+LD SKHA+LL EASRAGKW+LL+HAFDT LE G+IPHP  FTEM+ Q+  + +
Sbjct: 601 MTLSGYQLDQSKHALLLPEASRAGKWHLLEHAFDTTLEAGEIPHPSWFTEMVFQVIARED 660

Query: 661 YEQAVTLVRTMGYAPFQVSERQWTELFEGNMDRICWNSLKKLSDALSDCD-ASEATVSNL 720
           YE+A+TL+ TM Y+PFQVSE+QW EL E N DRI  +  +KL  A+ +CD ASEATV  L
Sbjct: 661 YERAITLINTMAYSPFQVSEKQWKELLEKNRDRISKDHQEKLLAAMDNCDVASEATVFYL 720

Query: 721 SRSLQSLCKLDIPENTSQFV--ASDHDATDGLQLPGSE----------IMQNMELHPDRV 780
            RSL+ LC      + S  +   S H   D   L G++          ++Q+ E   D  
Sbjct: 721 KRSLRFLCGSGSSRDLSSSIGCGSGH-MDDASLLDGNDEGFDFGRQDVLLQDSEQFIDGD 780

Query: 781 SDCCDK------------SLDITPVNS-HASLNMKIKSDSKMSSWSPSISEGV-LRTDEF 840
            DC +             S DIT V     S N     D + +S +  I  G  +   EF
Sbjct: 781 PDCSENPVMDCGDVPSCTSRDITGVEMVSGSSNNDNDDDGETNSHTGEIGFGKDMAYGEF 840

Query: 841 SDRSNNELSTFVLCDDNEDDEEELNMLLDEFDDSYDSNLPSVNEILKTWKEERKTDGL 861
           SD  +++ S F   ++++DD   +  L++  D SY+S+LPS  E+L+ WKE R+ DG+
Sbjct: 841 SDPLDDKFSAFDPTEESKDDNVIIESLINGVDHSYESDLPSAYEVLEAWKESRRKDGI 895

The following BLAST results are available for this feature:

BLAST of ClCG01G017610 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP451_ARATH	7.7e-248	59.94	Pentatricopeptide repeat-containing protein At5g67570, chloroplastic OS=Arabidop...	[more]
PPR64_ARATH	4.1e-68	33.06	Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidop...	[more]
PP362_ARATH	1.3e-24	23.63	Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana GN...	[more]
PP360_ARATH	7.4e-17	23.56	Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana GN...	[more]
PP124_ARATH	1.3e-16	23.51	Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop...	[more]

BLAST of ClCG01G017610 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFY8_CUCSA	0.0e+00	88.45	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495690 PE=4 SV=1	[more]
M5VXJ6_PRUPE	3.7e-289	60.52	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001240mg PE=4 SV=1	[more]
A0A061DHQ1_THECC	3.2e-269	54.60	Tetratricopeptide repeat-like superfamily protein, putative isoform 1 OS=Theobro...	[more]
B9HG05_POPTR	1.5e-266	55.79	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s14930g PE=4 SV=2	[more]
A0A0D2TJK9_GOSRA	1.7e-265	54.99	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G224000 PE=4 SV=1	[more]

BLAST of ClCG01G017610 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G67570.1	4.3e-249	59.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G30610.1	2.3e-69	33.06	pentatricopeptide (PPR) repeat-containing protein	[more]
AT5G02860.1	7.1e-26	23.63	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G01110.1	4.2e-18	23.56	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G74850.1	7.1e-18	23.51	plastid transcriptionally active 2	[more]

BLAST of ClCG01G017610 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079705\|ref\|XP_008440398.1\|	0.0e+00	88.57	PREDICTED: pentatricopeptide repeat-containing protein At5g67570, chloroplastic ...	[more]
gi\|449448456\|ref\|XP_004141982.1\|	0.0e+00	88.45	PREDICTED: pentatricopeptide repeat-containing protein At5g67570, chloroplastic ...	[more]
gi\|595822726\|ref\|XP_007204940.1\|	5.3e-289	60.52	hypothetical protein PRUPE_ppa001240mg [Prunus persica]	[more]
gi\|645219901\|ref\|XP_008237850.1\|	1.9e-286	59.86	PREDICTED: pentatricopeptide repeat-containing protein At5g67570, chloroplastic ...	[more]
gi\|1009145479\|ref\|XP_015890359.1\|	7.4e-283	57.13	PREDICTED: pentatricopeptide repeat-containing protein At5g67570, chloroplastic ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044763	single-organism cellular process
biological_process	GO:0042793	transcription from plastid promoter
biological_process	GO:0008150	biological_process
biological_process	GO:0006354	DNA-templated transcription, elongation
biological_process	GO:0022900	electron transport chain
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005840	ribosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016651	oxidoreductase activity, acting on NAD(P)H
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0008568	microtubule-severing ATPase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G017610.1	ClCG01G017610.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 522..547 score: 1.1E-4coord: 259..287 score: 0.013coord: 415..444 score:
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 339..385 score: 0.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 520..547 score: 3.7E-5coord: 259..287 score: 0
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 563..597 score: 8.331coord: 633..667 score: 5.196coord: 342..376 score: 9.273coord: 447..481 score: 6.39coord: 377..411 score: 8.276coord: 292..326 score: 6.237coord: 412..446 score: 8.583coord: 598..632 score: 5.185coord: 517..551 score: 9.087coord: 256..290 score: 7.783coord: 483..513 score: 5
IPR011990	Tetratricopeptide-like helical domain	GENE3D	G3DSA:1.25.40.10		coord: 259..306 score: 4.7E-6coord: 380..544 score: 4.
None	No IPR available	unknown	Coil	Coil	coord: 43..63 scor
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 13..43 score: 4.7E-151coord: 206..604 score: 4.7E
None	No IPR available	PANTHER	PTHR24015:SF427	SUBFAMILY NOT NAMED	coord: 13..43 score: 4.7E-151coord: 206..604 score: 4.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G017610	Csa6G495690	Cucumber (Chinese Long) v2	cuwcgB432
ClCG01G017610	MELO3C007637	Melon (DHL92) v3.5.1	mewcgB514
ClCG01G017610	Cla014032	Watermelon (97103) v1	wcgwmB141
ClCG01G017610	Cla97C01G016780	Watermelon (97103) v2	wcgwmbB089
ClCG01G017610	Bhi03G000796	Wax gourd	wcgwgoB223
ClCG01G017610	CSPI06G28940	Wild cucumber (PI 183967)	cpiwcgB453
ClCG01G017610	Cucsa.103230	Cucumber (Gy14) v1	cgywcgB134
ClCG01G017610	CmaCh03G009130	Cucurbita maxima (Rimu)	cmawcgB579
ClCG01G017610	CmoCh03G009520	Cucurbita moschata (Rifu)	cmowcgB575
ClCG01G017610	Lsi01G008910	Bottle gourd (USVL1VR-Ls)	lsiwcgB127
ClCG01G017610	Cp4.1LG10g02150	Cucurbita pepo (Zucchini)	cpewcgB061
ClCG01G017610	CsGy6G028410	Cucumber (Gy14) v2	cgybwcgB399
ClCG01G017610	MELO3C007638.2	Melon (DHL92) v3.6.1	medwcgB509
ClCG01G017610	CsaV3_6G044150	Cucumber (Chinese Long) v3	cucwcgB455

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G017610	Silver-seed gourd	carwcgB0397
ClCG01G017610	Silver-seed gourd	carwcgB0444
ClCG01G017610	Silver-seed gourd	carwcgB0744
ClCG01G017610	Cucumber (Chinese Long) v3	cucwcgB128
ClCG01G017610	Cucumber (Chinese Long) v3	cucwcgB296
ClCG01G017610	Watermelon (97103) v2	wcgwmbB121
ClCG01G017610	Wax gourd	wcgwgoB217
ClCG01G017610	Watermelon (Charleston Gray)	wcgwcgB112
ClCG01G017610	Cucumber (Gy14) v1	cgywcgB597
ClCG01G017610	Cucumber (Gy14) v1	cgywcgB670
ClCG01G017610	Cucurbita maxima (Rimu)	cmawcgB153
ClCG01G017610	Cucurbita maxima (Rimu)	cmawcgB754
ClCG01G017610	Cucurbita moschata (Rifu)	cmowcgB755
ClCG01G017610	Cucurbita moschata (Rifu)	cmowcgB013
ClCG01G017610	Cucurbita moschata (Rifu)	cmowcgB139
ClCG01G017610	Wild cucumber (PI 183967)	cpiwcgB121
ClCG01G017610	Wild cucumber (PI 183967)	cpiwcgB296
ClCG01G017610	Cucumber (Chinese Long) v2	cuwcgB114
ClCG01G017610	Cucumber (Chinese Long) v2	cuwcgB285
ClCG01G017610	Melon (DHL92) v3.5.1	mewcgB278
ClCG01G017610	Melon (DHL92) v3.5.1	mewcgB471
ClCG01G017610	Watermelon (97103) v1	wcgwmB120
ClCG01G017610	Cucurbita pepo (Zucchini)	cpewcgB425
ClCG01G017610	Cucurbita pepo (Zucchini)	cpewcgB730
ClCG01G017610	Bottle gourd (USVL1VR-Ls)	lsiwcgB273
ClCG01G017610	Bottle gourd (USVL1VR-Ls)	lsiwcgB425
ClCG01G017610	Cucumber (Gy14) v2	cgybwcgB111
ClCG01G017610	Cucumber (Gy14) v2	cgybwcgB264
ClCG01G017610	Melon (DHL92) v3.6.1	medwcgB268
ClCG01G017610	Melon (DHL92) v3.6.1	medwcgB463
ClCG01G017610	Silver-seed gourd	carwcgB0002