ClCG01G016510 (gene) Watermelon (Charleston Gray)

NameClCG01G016510
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr01 : 30900544 .. 30905031 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAATCAAGAGACAAGAGGAAGAAGCGAGTTAGGAGAGTAAGAAATGCTTTGGCTCCTCACTTCATAGTGTTGGATCAGTAATTTTACAATATATCAGCAGAAAACCAAATTTTATTTGAATGCAAAGTGTGGGCTAAATTTCACTACTAGTTGAGGCTGAATGGGAGTCTTGACCCAGTCAACACTAGGGTTTGACAAAAAAAAAACGGGTGAGGTTTTGTTTAGGCCAGCCGCACGCCTACCGCCACCCCATTCTCTCTCACGTTCGGGTGCAGCGCCCCAGTAACCACCGCCGTCATTCATCCCGTAGTCGTCGCCGGTTTCTCAGCGTCCCCGTCGCCGGCAGTTGCAACGCCGTTCGCCGTCGCCAGTAGGAAGTTTTTGGGTCTCTCTCCCTCTCTCTAACGCTCCGCTTCTGCCTCCTTCCCTCACACTACCTCTTTCACAGATCGAGCCGCCGCGCCTCCTCCGACTGTTCATCTCCGGAAACCGCTGCCGCTCTGGCGCCACCGCCCAGTGACTGTCGAGACCAATGCCAATGGGTGTCTTCGTGACGGTTCGGTGAGTTTTCTTGTTGGTTATTGTTACGCGTGGCAATCTAACTCCAATCCCAAGTTACCCACACTATTCTGATAGTAGATTCGAGAAGTTTGAGGAAATTTAGCGGGCTGTCCAGCAGTTTTTAAGGACATTTGGCGACTTTTTCTGGTTAGTTTTGGGTTCCAGTCAGTTTCAAATCCATTGTGGCTTTGGTAGATTGAACTGTAACCTCTGATTTTATTGTATTTTGATTAGAGTTGGGCAAATTCATTGAGGCCAAGGGACCAAATTTTTGGAGTTAAATCTATTTGGGTAATTATTCTAAGAACACTATTTTTCGGTGAATTTGACAGCTTGTGTTTGGGCCCCAATTGTTGAAACTAAATTATGAATTAGGACTGGAACGTGGTTTTCGTAAGATCAAAGAGACACTACTATTCGAATGCTTTAGTGCCAAGTTATTTGATGATGTAAGCCGACCAGGATGTTATATGAAATGTATGTTGATTGAACATGGCTGTTTATGTGTTGACAATGAAAATTTATGAATGACATTCACGAATAGTTGTATGTTTAGCATGACCAGAGTGTAGAAATTATGTCGGACCTCATGTATGGACAATGTTATGTGATCAACTTTAAGAATCAAAGATTTTCTCAAACTAGATTTACAAGTTAGGTAGGTGGATATCCCAAAGACTGTCTTCGGGATTAGGTTCATTCATTATGAGTATTTGGTGTAGGTGTCTGGTGATGTGTGTTAGACTCACCAATGCTCTGCAGTTTCCATGGACTTCAGAAACTGAATTTTTGAAAAGCTTTCTAGAGTTGTTCGTAATAGCCTAAAGAGCCATATGACTTTGTAGTTGGAGGAAGTGGGAATAGAAGAGAGAATAGAATATAGTTATAATGAAGTGTGAAAAGGCTGATTGAGTTAGAGAGACATTTTGGTGGGGGGAAGACATATTTTGACGTATGTTTTACACAGGAATTTGACGAAACGTTTTATTGAGTGGACATTTGCTCTTAAAACCCTGGAAATTGTGTTCAAAATCCGCCTTAGAAGGTGATGAACTCACAAATACACACATGTACACTCATTCTCTCTGATTCTGTGTTCTTTTATGAAACTTCATTTTAAGATTGTGTAAAGTGATTGATGGGTGAAGACTGAAGATTTATGTGAAAACTACTTGTTATATTTTGTAATTTTATTTAATGGTCAAAAAACAAATGCAACATCATGGTTTAATTGAGGCTAATCTTTTTGTTTTTCCTTGTATTGTCTGATAAATCCAGTGTCACTGATCCCGGAATTGTAAAGTTGATATGGAATCCAGAGTTGTGGATTATTTCAAGCTCCGCTATTTACTATTTTCTAGGCAAGCATTTGTTTCCATTTTGGTGAACCAACCTGTAGAAGCTTGGCAAAAATTAAAGGTTGCCACTTGTTCAACAGTAAGTGCCAAACAAGTTGAAGAGGAGGTGGGAGAAGGGACGTTAGCACATGCCAATGACTCTACCGAAGTTTTTCGAAGATGGGGTTGTACCGACAATGATATTGCACAAATCTTTGCACGTGGGCCTTCTCTGCGCAGGAGTGACTTAAACCAACTACAAAATAAGCTCCATCTGCTTCAAGGCCTAGGCATCACATCTCCCGACCTTGTGAAGATCATTAATTGTCGTCCCCGGTTCCTCAAATGTCGGATTAACAACAACTTCCATGAGCGGATTGAGTTTTTCTTGAAAATGTTTGAAACTAAAGAAGTTCTTGTCAAAGCCATTGTAAGAAACCCCTCGCTTTTGACTTATGATTTCCATAACAGAGTCAAACCTGTAATTTCCCAGTATGAAGAAATGGGTCTTACTAAAAAGGATTTGATTCTCATGCTTATATCTCGCCCCACATTGATTCCAAGATCTTCATTTAATGATGAGAAGATGGAATACATACAAAAAACTAGGCTCTCACAGGGTGACAGGATGTTCAAATACTTTGTTACAATCATTGGTATCTCACGGCTTGAAACGATACGTCAAAAAGTAGCCAATTTGGAAAAGTTTGGTTTTACAGAAGATGAGATATTCGCCCTGCTTGGACGATCTCCCCTTATCTTGACTCTATCAGTTGATAAAGTGCAAAGGAACATGACTTTCATCTTGTGCACATTGAAGTTACCTGCTAAAGTTATTCTCAACTATCCATTTCTATTATATTTTAACCTGGAAGCTGTCTTGAAGCCACGGGTGCTTCTCTCACGAAAGATGGAGGAAATGGGTCTCCATTTGCAGATTGAAGGCCATTCAATGCTCAGGGCCCTTAGGATGACAGAGAAGAGATTCTTGAAGAAATTTGTTTATAGTCAACCAAAAGATGTTGCTGATGAGTTGATGCAATTCTATCAAAGTGCAAAAGGCATTAAGCGTTTGGCAGACACCTCAAGGAAGAAATGTCCTTGGGGATTTCCTTTCTGAACCGTTTTCTCTTTTGACATTTTTGAGGTTAATCTAAGAGATATCTGGCGTGGAGGTTAGGCCAACTTTGTGACACAGTATGTTTTGAATTGTAATTGATTCATTTACAAACTTATCATTTTTGTCATGTACAGCACTTGGGTTCTTGCATTGTTGTATCATTTGTCAGCAAGAATAAAGTTCAAAACCCATAAGCGTGAATACCTATAAGATTGGTTGGAAACGTTTCTCGACTTATTCTATTTTTGCTGTAGATTACCTGTTCTATGTAATAGGCCATCCAGCATCCTGCTCCCTGATCTACTATGGATGGAAGTGAAAGCTGTACTTAGTTTTGGAGGATGACTGGATGAGACGAGAACGTGTAACATGTCATCTAATTGGCATTAATGAACATTACATTCTCATAAGCTCAGGAAGAGTATGGAGGTTAATCTTATGGGATTTTGAACGTTGTTGAAGGAAGATTGGATGGCAAAACCAGTGAGGATTCTACCTTCTTATCAGATATTAAGTAAGAAAGCTTGTTTAGGATTTTATTTATAAATTTTTTAATTTGTACAGCAACGGAAAAATGAACAGCTGCTCTGGTTCCCACTCCAACTTGGAATTACATCAGCACCCGACTTCAGTAGGATTGAAGATGGATGAAAATGGCAGCTGACATCAATGGCCACCGGGTAATTAATTGTTCGAGGCTTGATAGTACGAGTTAACACTTTCATTCTTTTCTTAAATAAATAATTTTCTTATAAAATGGAATGGTTAAAGTTCTAATGATGGGTAGTCATCTACAAGCATCTCAAAGTGGAAGGAGATTGCAGAATCACATGGCGTTCAGGAATCAAAAGGCCTAATTTCAATTTTCACGGGAAAATGCACAATGTCTGTGTTAACCAATATGATCGTCATACAATATATCATATTTTTCTTTTATTCTCAATATATCAATTGTGGTGTTACACCAGCTTATTTAACATGTACTGCTTAGTTTTGGAATGTTCTATCTAGTTCCTTTTTCATAATTATCTGGCTTCTGGTCTAAAAATGATACATTGATTTTATTGTAGGTTTATAATTCTTTCTGCCGAGTTTGACACTCCCAGCTGCAACTAATTGATCACTGGCTGCTTCAATATGTTGAACTTTATGCACATTGTGCCGTCCTCTTTTTCATTTTCCTTAGTGCACGGGATACTATTATAATGAATGAGAGCAGCTGTCCTATCTTTGCAATGGACCTTGGTTCTTTCTTTCCATCAACGAGCTCTGATTCGGACACCCTGCTTATCGTAGAACGTAGTCGATTCTAACCATGTTTTTTTGTTAAGGATAAATGATGTATTAGGCCATCCTTAGACTGATTATTCTGCCGTGTGAGATTGCCATCAAAATAAAAGTTGCGTTGTTTGAAGTTATGTGCATCATGCGAAAGCATAGCTAAACCCTTGAGAAAAATACGAG

mRNA sequence

ATGAAAGAATCAAGAGACAAGAGGAAGAAGCGAGTTAGGAGAGCCAGCCGCACGCCTACCGCCACCCCATTCTCTCTCACGTTCGGGTGCAGCGCCCCAGTAACCACCGCCGTCATTCATCCCGTAGTCGTCGCCGGTTTCTCAGCGTCCCCGTCGCCGGCAGTTGCAACGCCGTTCGCCGTCGCCAATCGAGCCGCCGCGCCTCCTCCGACTGTTCATCTCCGGAAACCGCTGCCGCTCTGGCGCCACCGCCCAGTGACTGTCGAGACCAATGCCAATGGGTGTCTTCGTGACGGTTCGAGTTGGGCAAATTCATTGAGGCCAAGGGACCAAATTTTTGGAGTTAAATCTATTTGGTGTCACTGATCCCGGAATTGTAAAGTTGATATGGAATCCAGAGTTGTGGATTATTTCAAGCTCCGCTATTTACTATTTTCTAGGCAAGCATTTGTTTCCATTTTGGTGAACCAACCTGTAGAAGCTTGGCAAAAATTAAAGGTTGCCACTTGTTCAACAGTAAGTGCCAAACAAGTTGAAGAGGAGGTGGGAGAAGGGACGTTAGCACATGCCAATGACTCTACCGAAGTTTTTCGAAGATGGGGTTGTACCGACAATGATATTGCACAAATCTTTGCACGTGGGCCTTCTCTGCGCAGGAGTGACTTAAACCAACTACAAAATAAGCTCCATCTGCTTCAAGGCCTAGGCATCACATCTCCCGACCTTGTGAAGATCATTAATTGTCGTCCCCGGTTCCTCAAATGTCGGATTAACAACAACTTCCATGAGCGGATTGAGTTTTTCTTGAAAATGTTTGAAACTAAAGAAGTTCTTGTCAAAGCCATTGTAAGAAACCCCTCGCTTTTGACTTATGATTTCCATAACAGAGTCAAACCTGTAATTTCCCAGTATGAAGAAATGGGTCTTACTAAAAAGGATTTGATTCTCATGCTTATATCTCGCCCCACATTGATTCCAAGATCTTCATTTAATGATGAGAAGATGGAATACATACAAAAAACTAGGCTCTCACAGGGTGACAGGATGTTCAAATACTTTGTTACAATCATTGGTATCTCACGGCTTGAAACGATACGTCAAAAAGTAGCCAATTTGGAAAAGTTTGGTTTTACAGAAGATGAGATATTCGCCCTGCTTGGACGATCTCCCCTTATCTTGACTCTATCAGTTGATAAAGTGCAAAGGAACATGACTTTCATCTTGTGCACATTGAAGTTACCTGCTAAAGTTATTCTCAACTATCCATTTCTATTATATTTTAACCTGGAAGCTGTCTTGAAGCCACGGGTGCTTCTCTCACGAAAGATGGAGGAAATGGGTCTCCATTTGCAGATTGAAGGCCATTCAATGCTCAGGGCCCTTAGGATGACAGAGAAGAGATTCTTGAAGAAATTTGTTTATAGTCAACCAAAAGATGTTGCTGATGAGTTGATGCAATTCTATCAAAGTGCAAAAGGCATTAAGCGTTTGGCAGACACCTCAAGGAAGAAATGTCCTTGGGGATTTCCTTTCTGAACCGTTTTCTCTTTTGACATTTTTGAGGTTAATCTAAGAGATATCTGGCGTGGAGGTTAGGCCAACTTTGTGACACAGTATGTTTTGAATTGTAATTGATTCATTTACAAACTTATCATTTTTGTCATGTACAGCACTTGGGTTCTTGCATTGTTGTATCATTTGTCAGCAAGAATAAAGTTCAAAACCCATAAGCGTGAATACCTATAAGATTGGTTGGAAACGTTTCTCGACTTATTCTATTTTTGCTGTAGATTACCTGTTCTATGTAATAGGCCATCCAGCATCCTGCTCCCTGATCTACTATGGATGGAAGTGAAAGCTGTACTTAGTTTTGGAGGATGACTGGATGAGACGAGAACGTGTAACATGTCATCTAATTGGCATTAATGAACATTACATTCTCATAAGCTCAGGAAGAGTATGGAGGTTAATCTTATGGGATTTTGAACGTTGTTGAAGGAAGATTGGATGGCAAAACCACAACGGAAAAATGAACAGCTGCTCTGGTTCCCACTCCAACTTGGAATTACATCAGCACCCGACTTCAGTAGGATTGAAGATGGATGAAAATGGCAGCTGACATCAATGGCCACCGGGTTTATAATTCTTTCTGCCGAGTTTGACACTCCCAGCTGCAACTAATTGATCACTGGCTGCTTCAATATGTTGAACTTTATGCACATTGTGCCGTCCTCTTTTTCATTTTCCTTAGTGCACGGGATACTATTATAATGAATGAGAGCAGCTGTCCTATCTTTGCAATGGACCTTGGTTCTTTCTTTCCATCAACGAGCTCTGATTCGGACACCCTGCTTATCGTAGAACGTAGTCGATTCTAACCATGTTTTTTTGTTAAGGATAAATGATGTATTAGGCCATCCTTAGACTGATTATTCTGCCGTGTGAGATTGCCATCAAAATAAAAGTTGCGTTGTTTGAAGTTATGTGCATCATGCGAAAGCATAGCTAAACCCTTGAGAAAAATACGAG

Coding sequence (CDS)

ATGAAAGAATCAAGAGACAAGAGGAAGAAGCGAGTTAGGAGAGCCAGCCGCACGCCTACCGCCACCCCATTCTCTCTCACGTTCGGGTGCAGCGCCCCAGTAACCACCGCCGTCATTCATCCCGTAGTCGTCGCCGGTTTCTCAGCGTCCCCGTCGCCGGCAGTTGCAACGCCGTTCGCCGTCGCCAATCGAGCCGCCGCGCCTCCTCCGACTGTTCATCTCCGGAAACCGCTGCCGCTCTGGCGCCACCGCCCAGTGACTGTCGAGACCAATGCCAATGGGTGTCTTCGTGACGGTTCGAGTTGGGCAAATTCATTGAGGCCAAGGGACCAAATTTTTGGAGTTAAATCTATTTGGTGTCACTGA

Protein sequence

MKESRDKRKKRVRRASRTPTATPFSLTFGCSAPVTTAVIHPVVVAGFSASPSPAVATPFAVANRAAAPPPTVHLRKPLPLWRHRPVTVETNANGCLRDGSSWANSLRPRDQIFGVKSIWCH
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G016510.1ClCG01G016510.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROFILEPS51257PROKAR_LIPOPROTEINcoord: 1..30
score:

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG01G016510Cla97C01G015490Watermelon (97103) v2wcgwmbB089
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG01G016510Cucurbita moschata (Rifu)cmowcgB575
ClCG01G016510Wild cucumber (PI 183967)cpiwcgB124
ClCG01G016510Wild cucumber (PI 183967)cpiwcgB453
ClCG01G016510Cucumber (Chinese Long) v2cuwcgB538
ClCG01G016510Cucumber (Chinese Long) v2cuwcgB117
ClCG01G016510Cucumber (Chinese Long) v2cuwcgB118
ClCG01G016510Cucumber (Chinese Long) v2cuwcgB432
ClCG01G016510Melon (DHL92) v3.5.1mewcgB193
ClCG01G016510Melon (DHL92) v3.5.1mewcgB280
ClCG01G016510Melon (DHL92) v3.5.1mewcgB514
ClCG01G016510Watermelon (97103) v1wcgwmB117
ClCG01G016510Watermelon (97103) v1wcgwmB121
ClCG01G016510Watermelon (97103) v1wcgwmB141
ClCG01G016510Watermelon (97103) v1wcgwmB162
ClCG01G016510Cucurbita pepo (Zucchini)cpewcgB061
ClCG01G016510Cucurbita pepo (Zucchini)cpewcgB425
ClCG01G016510Bottle gourd (USVL1VR-Ls)lsiwcgB090
ClCG01G016510Bottle gourd (USVL1VR-Ls)lsiwcgB127
ClCG01G016510Cucumber (Gy14) v2cgybwcgB114
ClCG01G016510Cucumber (Gy14) v2cgybwcgB399
ClCG01G016510Melon (DHL92) v3.6.1medwcgB270
ClCG01G016510Melon (DHL92) v3.6.1medwcgB509
ClCG01G016510Silver-seed gourdcarwcgB0173
ClCG01G016510Silver-seed gourdcarwcgB0397
ClCG01G016510Silver-seed gourdcarwcgB0778
ClCG01G016510Silver-seed gourdcarwcgB0867
ClCG01G016510Cucumber (Chinese Long) v3cucwcgB132
ClCG01G016510Cucumber (Chinese Long) v3cucwcgB455
ClCG01G016510Watermelon (97103) v2wcgwmbB123
ClCG01G016510Watermelon (97103) v2wcgwmbB128
ClCG01G016510Wax gourdwcgwgoB221
ClCG01G016510Wax gourdwcgwgoB228
ClCG01G016510Watermelon (Charleston Gray)wcgwcgB013
ClCG01G016510Watermelon (Charleston Gray)wcgwcgB086
ClCG01G016510Watermelon (Charleston Gray)wcgwcgB113
ClCG01G016510Cucumber (Gy14) v1cgywcgB134
ClCG01G016510Cucumber (Gy14) v1cgywcgB394
ClCG01G016510Cucumber (Gy14) v1cgywcgB404
ClCG01G016510Cucurbita maxima (Rimu)cmawcgB754
ClCG01G016510Cucurbita maxima (Rimu)cmawcgB579
ClCG01G016510Cucurbita maxima (Rimu)cmawcgB694
ClCG01G016510Cucurbita moschata (Rifu)cmowcgB755