ClCG01G016480 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G016480
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionBrain protein 44-like
LocationCG_Chr01 : 30886313 .. 30890053 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAGGAGTTTCGGCACGTCGGTGGGGGCGTGCCGGCGAGCGGCGGCGCCAACCAGGGAGATAAGAGAGAAGAAAGAAAGAGGGCGGGCCGTTGGGGGTGTGCGGCTGCAGCAACAATGTGAGAGCAGAAATCAGAGAACAAAGTAAATAAGTGGGGGGAAGAAGAGCCGTAGGGTTTAGGGTTTTTTCTTTTCCTAATTTCTTTCAATATATAAAAGAAAGGAAAAATCCAAAATCAGAGAGTTCAGAGACAATGCAACTCAATCCAAAACCAAAAAGTATGCAGAGTTAACGTAACAAACCTCGAAATGCCTATTGGACGTGAACTGCTGCTTCTCACGGCGGAGAGAAACGACGGAATCGGAAAGATAAGCCGTAACCCTAATTAAGAGCTAAATTTGGCGCTCTATTGAATGAGCATCTCCTGTTAATGATGGGCTGGGCCTTTAGGCCCATAAGAAAAGAATACCCAAAAAGAAAAAGGAAAAAAGAAAATGGAAAAAAGAAAAAAGAAATGAGCATACTAGTCGCTCTTCATCCTCTCCTTTTGGGTGGGTTCAAAGTCAAAATTCTATAGTGGTTCTCCATTCTCTCTTGGCCGATCTCCATCGAATTACTGACTGGTAGGTTTCTGCACGTCCTTCAGATTTTATGCAGCTGAATTTTCTTAGATTATGAGGTTTTCTTTTACTTTATGGGAAATATACATATCTTTTCTGCTTGGTTGATTGGGAATCTTAGTGACAATACGGAGATCCGTTGAAACATTAAATGTGTAGATAAGACAATTTTGGATGTTATTGGATTTGGAAGTTTTATTGAAATACACACACCGTAACGGTCATTTGTTCTCTGATGATGGCTATGAATTCATAGAACTTTTTATAATTAATTTATTGGGATTTTAAGTGGCACGGGCTTTTGATAGCTGAGAAGAAATGAGCTGTTGATAAAGGGATTTGTGTTAAGATTGTGCTTTGGGTTCTGTACATGGCTTATGCTTTAAATAATTACGGGCGTAAGAAAACTCGTTTGGTTAGCTGAGTTTGGTTTCGGGAAAACGCTACTTCGACTAAAATGCTCTGTTCCTTCTTTCTGTTTCTACATTTCTGCACTTGACTATTGAGGGGTCCTAATCAAAATTGTCACCGACGATAAAAGAAAGTAGACAAGCATTATGAACTTCTGCAGGAATGTTGTTTAGGTTTAATTCTGATATCTTCATACATGAAGGAAAATACATGTGGGAGAGCATGTGACATTGAATTCGCCGTTTTTATCACGGTGGTACTTGATGGGATTTTAAGTTGGGATTTGGGTTTGTGGATTATATTAATTTGTGACAACGAGAATGGTTTTTGTTTCTTAAATTCATTAGCTTCGTTGATCTGATGATCTATTTTTTATATTTTTAAAGTTTGACGGTTATTTTTTCCTATTCTCTTCTCTCTCTCTCCCCCTCTCTAAAATTGAGAAGGATTATAAACTTAGCTGATGGATTTTTGTCATCACATGAGAGTATGAAATGATTTCAAGTCCTAGGGAATTTCATAATATCTCAGATGAATAGTTTTACATTTTAGAAGATCACAAGACTATTTCAGAGATTGAAAAGTATTTTGGAGTTTGTGCCTGAAGTCTTTGTTTTTTGTTTTGCGGGGGGTTTGTCAAATTGAAGTAGGAATTAGGATGAGTTTTTGGTTGGAATGGTCGTACATGTTCTCTGCTCGTTTGCCTTAATATCTAGTGGGTGCTGGTTAACACATTGTATTCCTTCTTTTGTCTTTCTTAAGAAAGAAAGAAGTGCAATTTTTTTTTTTTTTTTTGACTTGTCTGGTTTTATTTTTAACCCTCATCCGATGTAGATGCTTTGTATGAAAGCATATGATCTTAGTTTATCAGTAGTTGTCATAACTCAGTACATGTGATTTCTTAAACGTTGTTTTTGTCTCACCATTACATGATGTTTCATGAATTTTGAATACTATGGTCTATTGGTTTGTCCTTATTTATTTTGTAGAATTCAGAGAATGGCTTCATTCCGAGCATTCTTGAACAGCCCTGTTGGTCCAAAAACTACTCATTTTTGGGGACCTGTCGCCAACTGGGGATTTGTGGCTGCTGTATGTTTCACTTCAATTTAAGTATCAGTTCTATCATGCTTACCTGTTGCCTATCACTTGATTGTTTTTCTTAGTTCTTTTCTGCTATTGTCTTGATCCTGCTGGTGGATTCAAAACAGGGTTTAGCAGACATGAACAAGCCACCAGAAATGATTTCTGGCAACATGACAGCAGGTTGAACCTGTCTATGTTAGAACTCATTTATCTGTAGTGTCTTTTAGTTTGGTCTAAGTGGTAATATCTGCTCTTGTCATTGCAGCAATGTGCGTCTATTCAGCCCTGTTCATGAGATTTGCATGGATGGTGCAACCCCGCAATTACCTACTTCTTGCTTGTCATGCATCGAATGAAACTGTACAGTTGTATCAATTCTCACGTTGGGCAAAGGCTCAAGGGTAAATAACCAACTAATCAACTTCATTGAACTTCATGATTGTTTCCTCTATATGGCTGCTATTCTTGAAACTTCCACTGATGTCTCCCTAGCTGGGAAGGTCTTTGGCCAAAAAAGTTATCATCTGGCATTGGTTGTGTTATTAAAGGTAGAACACGCAAACCATAAATTCATATATCACTCTAGTGCTTGAGTTTGAGAGTAATTGTCTCCCAGGATAGAATAGATTACCTTTTTTTTCTAGAGGTAGCACCCCGTCCACAAGATCAACGAACCGCATTTTGTAGATATACCGAACTTGAACGAATTTGAAATGGAGAGAATTTTTAATGAAGACATATGACAAAAAATAAATAATGTGCTAAACCATATTGAAGAAATGTCATATTTATATCCTTTCTTTAAGTTGGTTATTTAATGAAAAGAGGCATCCCTTAATGAAAGAATGCAACCTTATGATAACCAAAGGATGCAACTCTTATCGAAGAGTTACATACCATTTAATCCAACAGGTTGTTAGCAAAACAGTATCTTGGTTGGTATCTTGTATCATTTTTTTGGACGAGAATTTATCAAAAAAATTTGTTTTATGTTACACTGAAAGTTCAATTATTTTGATATGATACTATCCAACTATCAAGACTATTTAGTATTAGCATGCACAATTGCACATTAACGTGTTATATTCCAGCTTAACTTTGTGGGTATTTGCTTGTAAATTGTGGGTATGATAGTTGTCTCATTTCTTTTGGTCAAAGTAATAAGCCTTTTTTTTTGACATAAGCTGCATTCCAATAGGTACTTGTCAGAGAAGAAAGACGAAGCTGCATCTCAGTAGCTTGAAGCTATATTCCCCATCCTTTTGTTTTTATGTCATGATTTTCTACGGGTTGTAATTGACTCATTGATAATCGTTGTGTATGTTATTTGAAAATATATCCAGGAAGCTACTTCAGTAACACCAAAATGGAATTGGGAATTTTTCTCCCGAGAAGTAATAAATATTTCAGATTTGCCGATTCTGAGTCAACATACAAGAATGCAGCACATGAGTTACCTTCTTATTATTATTATTTTGACAAGACATGAGTTACCTTATATACAAGGCACTAGGGGGATGTCAGATACCTTAATCGTTGTAAATTAAGGGACTGTGGCAGTGCGCTGAACTCTCTTTATAATTCTTGGGGGTTGTGATAAATGGTTGGGTGGGACTACCAAAT

mRNA sequence

GAAAAGGAGTTTCGGCACGTCGGTGGGGGCGTGCCGGCGAGCGGCGGCGCCAACCAGGGAGATAAGAGAGAAGAAAGAAAGAGGGCGGGCCGTTGGGGGTGTGCGGCTGCAGCAACAATAATTCAGAGAATGGCTTCATTCCGAGCATTCTTGAACAGCCCTGTTGGTCCAAAAACTACTCATTTTTGGGGACCTGTCGCCAACTGGGGATTTGTGGCTGCTTTCTTTTCTGCTATTGTCTTGATCCTGCTGGTGGATTCAAAACAGGGTTTAGCAGACATGAACAAGCCACCAGAAATGATTTCTGGCAACATGACAGCAGCAATGTGCGTCTATTCAGCCCTGTTCATGAGATTTGCATGGATGGTGCAACCCCGCAATTACCTACTTCTTGCTTGTCATGCATCGAATGAAACTGTACAGTTGTATCAATTCTCACGTTGGGCAAAGGCTCAAGGGTACTTGTCAGAGAAGAAAGACGAAGCTGCATCTCAGTAGCTTGAAGCTATATTCCCCATCCTTTTGTTTTTATGTCATGATTTTCTACGGGTTGTAATTGACTCATTGATAATCGTTGTGTATGTTATTTGAAAATATATCCAGGAAGCTACTTCAGTAACACCAAAATGGAATTGGGAATTTTTCTCCCGAGAAGTAATAAATATTTCAGATTTGCCGATTCTGAGTCAACATACAAGAATGCAGCACATGAGTTACCTTCTTATTATTATTATTTTGACAAGACATGAGTTACCTTATATACAAGGCACTAGGGGGATGTCAGATACCTTAATCGTTGTAAATTAAGGGACTGTGGCAGTGCGCTGAACTCTCTTTATAATTCTTGGGGGTTGTGATAAATGGTTGGGTGGGACTACCAAAT

Coding sequence (CDS)

GAAAAGGAGTTTCGGCACGTCGGTGGGGGCGTGCCGGCGAGCGGCGGCGCCAACCAGGGAGATAAGAGAGAAGAAAGAAAGAGGGCGGGCCGTTGGGGGTGTGCGGCTGCAGCAACAATAATTCAGAGAATGGCTTCATTCCGAGCATTCTTGAACAGCCCTGTTGGTCCAAAAACTACTCATTTTTGGGGACCTGTCGCCAACTGGGGATTTGTGGCTGCTTTCTTTTCTGCTATTGTCTTGATCCTGCTGGTGGATTCAAAACAGGGTTTAGCAGACATGAACAAGCCACCAGAAATGATTTCTGGCAACATGACAGCAGCAATGTGCGTCTATTCAGCCCTGTTCATGAGATTTGCATGGATGGTGCAACCCCGCAATTACCTACTTCTTGCTTGTCATGCATCGAATGAAACTGTACAGTTGTATCAATTCTCACGTTGGGCAAAGGCTCAAGGGTACTTGTCAGAGAAGAAAGACGAAGCTGCATCTCAGTAG

Protein sequence

EKEFRHVGGGVPASGGANQGDKREERKRAGRWGCAAAATIIQRMASFRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMISGNMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEAASQ
Homology
[Close]
BLAST of ClCG01G016480 vs. Swiss-Prot
Match: MPC1_ARATH (Mitochondrial pyruvate carrier 1 OS=Arabidopsis thaliana GN=MPC1 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.0e-47
Identity = 89/115 (77.39%), Postives = 94/115 (81.74%), Query Frame = 1 

Query: 47  FRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMISGNMT 106
           F+AFLNSP+GPKTTHFWGP+ANWGFVAA               GL DM KPPEMISGNM+
Sbjct: 6   FQAFLNSPIGPKTTHFWGPIANWGFVAA---------------GLVDMQKPPEMISGNMS 65

Query: 107 AAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDE 162
           +AMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQ SRWA+AQGYLS KK+E
Sbjct: 66  SAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQLSRWARAQGYLSSKKEE 105

[Close]
BLAST of ClCG01G016480 vs. Swiss-Prot
Match: MPC1_HUMAN (Mitochondrial pyruvate carrier 1 OS=Homo sapiens GN=MPC1 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 6.8e-20
Identity = 54/108 (50.00%), Postives = 59/108 (54.63%), Query Frame = 1 

Query: 43  RMASFRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMIS 102
           R   FR +L S      THFWGPVANWG   A                + DM K PE+IS
Sbjct: 14  RSKDFRDYLMS------THFWGPVANWGLPIA---------------AINDMKKSPEIIS 73

Query: 103 GNMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAK 151
           G MT A+C YS  FMRFA+ VQPRN+LL ACHA+NE  QL Q  R  K
Sbjct: 74  GRMTFALCCYSLTFMRFAYKVQPRNWLLFACHATNEVAQLIQGGRLIK 100

[Close]
BLAST of ClCG01G016480 vs. Swiss-Prot
Match: MPC1_BOVIN (Mitochondrial pyruvate carrier 1 OS=Bos taurus GN=MPC1 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-19
Identity = 53/105 (50.48%), Postives = 58/105 (55.24%), Query Frame = 1 

Query: 43  RMASFRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMIS 102
           R   FR +L S      THFWGPVANWG   A                + DM K PE+IS
Sbjct: 14  RSKDFRDYLMS------THFWGPVANWGLPIA---------------AINDMKKSPEIIS 73

Query: 103 GNMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSR 148
           G MT A+C YS  FMRFA+ VQPRN+LL ACHA+NE  QL Q  R
Sbjct: 74  GRMTFALCCYSLTFMRFAYKVQPRNWLLFACHATNEVAQLIQGGR 97

[Close]
BLAST of ClCG01G016480 vs. Swiss-Prot
Match: MPC1_MOUSE (Mitochondrial pyruvate carrier 1 OS=Mus musculus GN=Mpc1 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.4e-19
Identity = 52/105 (49.52%), Postives = 57/105 (54.29%), Query Frame = 1 

Query: 43  RMASFRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMIS 102
           R   FR +L S      THFWGPVANWG   A                + DM K PE+IS
Sbjct: 14  RSKDFRDYLMS------THFWGPVANWGLPIA---------------AINDMKKSPEIIS 73

Query: 103 GNMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSR 148
           G MT A+C YS  FMRFA+ VQPRN+LL ACH +NE  QL Q  R
Sbjct: 74  GRMTFALCCYSLTFMRFAYKVQPRNWLLFACHVTNEVAQLIQGGR 97

[Close]
BLAST of ClCG01G016480 vs. Swiss-Prot
Match: MPC1_RAT (Mitochondrial pyruvate carrier 1 OS=Rattus norvegicus GN=Mpc1 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.4e-19
Identity = 52/105 (49.52%), Postives = 57/105 (54.29%), Query Frame = 1 

Query: 43  RMASFRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMIS 102
           R   FR +L S      THFWGPVANWG   A                + DM K PE+IS
Sbjct: 14  RSKDFRDYLMS------THFWGPVANWGLPIA---------------AINDMKKSPEIIS 73

Query: 103 GNMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSR 148
           G MT A+C YS  FMRFA+ VQPRN+LL ACH +NE  QL Q  R
Sbjct: 74  GRMTFALCCYSLTFMRFAYKVQPRNWLLFACHVTNEVAQLIQGGR 97

[Close]
BLAST of ClCG01G016480 vs. TrEMBL
Match: A0A0A0KI44_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G489900 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 9.4e-53
Identity = 106/122 (86.89%), Postives = 106/122 (86.89%), Query Frame = 1 

Query: 44  MASFRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMISG 103
           MASFRAFLNSPVGPKTTHFWGPVANWGFVAA               GLADMNKPPEMISG
Sbjct: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAA---------------GLADMNKPPEMISG 60

Query: 104 NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEAA 163
           NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEA 
Sbjct: 61  NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEAG 107

Query: 164 SQ 166
           SQ
Sbjct: 121 SQ 107

[Close]
BLAST of ClCG01G016480 vs. TrEMBL
Match: A5AH05_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g01780 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 6.8e-51
Identity = 102/121 (84.30%), Postives = 103/121 (85.12%), Query Frame = 1 

Query: 44  MASFRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMISG 103
           MASFRAFLNSPVGPKTTHFWGP+ANWGFVAA               GLADMNKPPEMISG
Sbjct: 1   MASFRAFLNSPVGPKTTHFWGPIANWGFVAA---------------GLADMNKPPEMISG 60

Query: 104 NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEAA 163
           NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQ SRWAK QGYL EKKDEAA
Sbjct: 61  NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQLSRWAKGQGYLQEKKDEAA 106

Query: 164 S 165
           S
Sbjct: 121 S 106

[Close]
BLAST of ClCG01G016480 vs. TrEMBL
Match: A0A022RSV3_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016783mg PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.7e-49
Identity = 99/122 (81.15%), Postives = 102/122 (83.61%), Query Frame = 1 

Query: 44  MASFRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMISG 103
           MASFR FLNSPVGPKTTHFWGPVANWGFV A               GL DM KPPE+ISG
Sbjct: 1   MASFRTFLNSPVGPKTTHFWGPVANWGFVIA---------------GLVDMQKPPELISG 60

Query: 104 NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEAA 163
           NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAK QGYL+EKKDEA+
Sbjct: 61  NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKGQGYLTEKKDEAS 107

Query: 164 SQ 166
           SQ
Sbjct: 121 SQ 107

[Close]
BLAST of ClCG01G016480 vs. TrEMBL
Match: A0A0D2PMF2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G060500 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.9e-49
Identity = 98/121 (80.99%), Postives = 103/121 (85.12%), Query Frame = 1 

Query: 45  ASFRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMISGN 104
           +SFRAFLNSPVGPKTTHFWGPVANWGFV A               GL DMNKPPEMISGN
Sbjct: 3   SSFRAFLNSPVGPKTTHFWGPVANWGFVLA---------------GLVDMNKPPEMISGN 62

Query: 105 MTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEAAS 164
           MT+AMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQ SRWA+AQGYLSEKK+EA+S
Sbjct: 63  MTSAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQLSRWARAQGYLSEKKEEASS 108

Query: 165 Q 166
           Q
Sbjct: 123 Q 108

[Close]
BLAST of ClCG01G016480 vs. TrEMBL
Match: M5XZK5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013706mg PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 8.3e-49
Identity = 97/122 (79.51%), Postives = 101/122 (82.79%), Query Frame = 1 

Query: 44  MASFRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMISG 103
           MASFRAFLNSPVGPKTTHFWGP+ANWGFVAA               GLADMNKPPEMISG
Sbjct: 1   MASFRAFLNSPVGPKTTHFWGPIANWGFVAA---------------GLADMNKPPEMISG 60

Query: 104 NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEAA 163
           NMTAAMCVYSALFMRFAWMVQPRNYLLLACH SNETVQLYQ SRWA+ QGY  +KKDE A
Sbjct: 61  NMTAAMCVYSALFMRFAWMVQPRNYLLLACHVSNETVQLYQLSRWARGQGYFPQKKDEPA 107

Query: 164 SQ 166
           S+
Sbjct: 121 SE 107

[Close]
BLAST of ClCG01G016480 vs. TAIR10
Match: AT5G20090.1 (AT5G20090.1 Uncharacterised protein family (UPF0041))

HSP 1 Score: 188.7 bits (478), Expect = 2.8e-48
Identity = 89/115 (77.39%), Postives = 94/115 (81.74%), Query Frame = 1 

Query: 47  FRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMISGNMT 106
           F+AFLNSP+GPKTTHFWGP+ANWGFVAA               GL DM KPPEMISGNM+
Sbjct: 6   FQAFLNSPIGPKTTHFWGPIANWGFVAA---------------GLVDMQKPPEMISGNMS 65

Query: 107 AAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDE 162
           +AMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQ SRWA+AQGYLS KK+E
Sbjct: 66  SAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQLSRWARAQGYLSSKKEE 105

[Close]
BLAST of ClCG01G016480 vs. NCBI nr
Match: gi|449448376|ref|XP_004141942.1| (PREDICTED: mitochondrial pyruvate carrier 1 [Cucumis sativus])

HSP 1 Score: 214.5 bits (545), Expect = 1.4e-52
Identity = 106/122 (86.89%), Postives = 106/122 (86.89%), Query Frame = 1 

Query: 44  MASFRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMISG 103
           MASFRAFLNSPVGPKTTHFWGPVANWGFVAA               GLADMNKPPEMISG
Sbjct: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAA---------------GLADMNKPPEMISG 60

Query: 104 NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEAA 163
           NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEA 
Sbjct: 61  NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEAG 107

Query: 164 SQ 166
           SQ
Sbjct: 121 SQ 107

[Close]
BLAST of ClCG01G016480 vs. NCBI nr
Match: gi|659079322|ref|XP_008440195.1| (PREDICTED: mitochondrial pyruvate carrier 1-like [Cucumis melo])

HSP 1 Score: 213.0 bits (541), Expect = 3.9e-52
Identity = 105/122 (86.07%), Postives = 105/122 (86.07%), Query Frame = 1 

Query: 44  MASFRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMISG 103
           M SFRAFLNSPVGPKTTHFWGPVANWGFVAA               GLADMNKPPEMISG
Sbjct: 1   MVSFRAFLNSPVGPKTTHFWGPVANWGFVAA---------------GLADMNKPPEMISG 60

Query: 104 NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEAA 163
           NMTAAMCVYS LFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEAA
Sbjct: 61  NMTAAMCVYSGLFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEAA 107

Query: 164 SQ 166
           SQ
Sbjct: 121 SQ 107

[Close]
BLAST of ClCG01G016480 vs. NCBI nr
Match: gi|225456262|ref|XP_002283422.1| (PREDICTED: mitochondrial pyruvate carrier 1 [Vitis vinifera])

HSP 1 Score: 208.4 bits (529), Expect = 9.7e-51
Identity = 102/121 (84.30%), Postives = 103/121 (85.12%), Query Frame = 1 

Query: 44  MASFRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMISG 103
           MASFRAFLNSPVGPKTTHFWGP+ANWGFVAA               GLADMNKPPEMISG
Sbjct: 1   MASFRAFLNSPVGPKTTHFWGPIANWGFVAA---------------GLADMNKPPEMISG 60

Query: 104 NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEAA 163
           NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQ SRWAK QGYL EKKDEAA
Sbjct: 61  NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQLSRWAKGQGYLQEKKDEAA 106

Query: 164 S 165
           S
Sbjct: 121 S 106

[Close]
BLAST of ClCG01G016480 vs. NCBI nr
Match: gi|658000767|ref|XP_008392840.1| (PREDICTED: mitochondrial pyruvate carrier 1-like [Malus domestica])

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49
Identity = 100/122 (81.97%), Postives = 103/122 (84.43%), Query Frame = 1 

Query: 44  MASFRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMISG 103
           MASFRAFLNSPVGPKTTHFWGPVANWGFVAA               GLADMNKPPEMISG
Sbjct: 1   MASFRAFLNSPVGPKTTHFWGPVANWGFVAA---------------GLADMNKPPEMISG 60

Query: 104 NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEAA 163
           NMTAAMCVYSALFMRFAWMVQPRNYLLLACH SNETVQLYQ SRWA+ QGYL+ KKDEAA
Sbjct: 61  NMTAAMCVYSALFMRFAWMVQPRNYLLLACHVSNETVQLYQLSRWARGQGYLAPKKDEAA 107

Query: 164 SQ 166
           S+
Sbjct: 121 SE 107

[Close]
BLAST of ClCG01G016480 vs. NCBI nr
Match: gi|848859372|ref|XP_012830587.1| (PREDICTED: mitochondrial pyruvate carrier 1-like [Erythranthe guttata])

HSP 1 Score: 203.8 bits (517), Expect = 2.4e-49
Identity = 99/122 (81.15%), Postives = 102/122 (83.61%), Query Frame = 1 

Query: 44  MASFRAFLNSPVGPKTTHFWGPVANWGFVAAFFSAIVLILLVDSKQGLADMNKPPEMISG 103
           MASFR FLNSPVGPKTTHFWGPVANWGFV A               GL DM KPPE+ISG
Sbjct: 1   MASFRTFLNSPVGPKTTHFWGPVANWGFVIA---------------GLVDMQKPPELISG 60

Query: 104 NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKAQGYLSEKKDEAA 163
           NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAK QGYL+EKKDEA+
Sbjct: 61  NMTAAMCVYSALFMRFAWMVQPRNYLLLACHASNETVQLYQFSRWAKGQGYLTEKKDEAS 107

Query: 164 SQ 166
           SQ
Sbjct: 121 SQ 107

The following BLAST results are available for this feature:
BLAST of ClCG01G016480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MPC1_ARATH5.0e-4777.39Mitochondrial pyruvate carrier 1 OS=Arabidopsis thaliana GN=MPC1 PE=3 SV=1[more]
MPC1_HUMAN6.8e-2050.00Mitochondrial pyruvate carrier 1 OS=Homo sapiens GN=MPC1 PE=1 SV=1[more]
MPC1_BOVIN1.2e-1950.48Mitochondrial pyruvate carrier 1 OS=Bos taurus GN=MPC1 PE=1 SV=1[more]
MPC1_MOUSE3.4e-1949.52Mitochondrial pyruvate carrier 1 OS=Mus musculus GN=Mpc1 PE=1 SV=1[more]
MPC1_RAT3.4e-1949.52Mitochondrial pyruvate carrier 1 OS=Rattus norvegicus GN=Mpc1 PE=3 SV=1[more]
BLAST of ClCG01G016480 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KI44_CUCSA9.4e-5386.89Uncharacterized protein OS=Cucumis sativus GN=Csa_6G489900 PE=4 SV=1[more]
A5AH05_VITVI6.8e-5184.30Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g01780 PE=4 SV=... [more]
A0A022RSV3_ERYGU1.7e-4981.15Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a016783mg PE=4 SV=1[more]
A0A0D2PMF2_GOSRA4.9e-4980.99Uncharacterized protein OS=Gossypium raimondii GN=B456_001G060500 PE=4 SV=1[more]
M5XZK5_PRUPE8.3e-4979.51Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013706mg PE=4 SV=1[more]
BLAST of ClCG01G016480 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G20090.12.8e-4877.39 Uncharacterised protein family (UPF0041)[more]
BLAST of ClCG01G016480 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449448376|ref|XP_004141942.1|1.4e-5286.89PREDICTED: mitochondrial pyruvate carrier 1 [Cucumis sativus][more]
gi|659079322|ref|XP_008440195.1|3.9e-5286.07PREDICTED: mitochondrial pyruvate carrier 1-like [Cucumis melo][more]
gi|225456262|ref|XP_002283422.1|9.7e-5184.30PREDICTED: mitochondrial pyruvate carrier 1 [Vitis vinifera][more]
gi|658000767|ref|XP_008392840.1|1.1e-4981.97PREDICTED: mitochondrial pyruvate carrier 1-like [Malus domestica][more]
gi|848859372|ref|XP_012830587.1|2.4e-4981.15PREDICTED: mitochondrial pyruvate carrier 1-like [Erythranthe guttata][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005336MPC
Vocabulary: Cellular Component
TermDefinition
GO:0005743mitochondrial inner membrane
Vocabulary: Biological Process
TermDefinition
GO:0006850mitochondrial pyruvate transport
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009060 aerobic respiration
biological_process GO:0006096 glycolytic process
biological_process GO:0006850 mitochondrial pyruvate transport
biological_process GO:0006301 postreplication repair
biological_process GO:0046686 response to cadmium ion
biological_process GO:0010119 regulation of stomatal movement
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0031305 integral component of mitochondrial inner membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0050833 pyruvate transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G016480.1ClCG01G016480.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005336Mitochondrial pyruvate carrierPFAMPF03650MPCcoord: 47..75
score: 3.5E-8coord: 90..161
score: 1.4
NoneNo IPR availablePANTHERPTHR14154UPF0041 BRAIN PROTEIN 44-RELATEDcoord: 90..161
score: 7.6E-59coord: 40..74
score: 7.6
NoneNo IPR availablePANTHERPTHR14154:SF16SUBFAMILY NOT NAMEDcoord: 90..161
score: 7.6E-59coord: 40..74
score: 7.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG01G016480Csa6G489900Cucumber (Chinese Long) v2cuwcgB432
ClCG01G016480MELO3C007517Melon (DHL92) v3.5.1mewcgB514
ClCG01G016480Cla001801Watermelon (97103) v1wcgwmB141
ClCG01G016480Cla97C01G015440Watermelon (97103) v2wcgwmbB089
ClCG01G016480Bhi03G001495Wax gourdwcgwgoB228
ClCG01G016480CSPI06G27610Wild cucumber (PI 183967)cpiwcgB453
ClCG01G016480Cucsa.102000Cucumber (Gy14) v1cgywcgB134
ClCG01G016480Lsi01G010260Bottle gourd (USVL1VR-Ls)lsiwcgB127
ClCG01G016480Cp4.1LG10g02940Cucurbita pepo (Zucchini)cpewcgB061
ClCG01G016480CsGy6G027060Cucumber (Gy14) v2cgybwcgB399
ClCG01G016480Carg00874Silver-seed gourdcarwcgB0397
ClCG01G016480CsaV3_6G042760Cucumber (Chinese Long) v3cucwcgB455
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG01G016480Wax gourdwcgwgoB221
ClCG01G016480Watermelon (Charleston Gray)wcgwcgB013
ClCG01G016480Watermelon (Charleston Gray)wcgwcgB086
ClCG01G016480Watermelon (Charleston Gray)wcgwcgB113
ClCG01G016480Cucumber (Gy14) v1cgywcgB394
ClCG01G016480Cucumber (Gy14) v1cgywcgB404
ClCG01G016480Cucurbita maxima (Rimu)cmawcgB754
ClCG01G016480Cucurbita maxima (Rimu)cmawcgB579
ClCG01G016480Cucurbita maxima (Rimu)cmawcgB694
ClCG01G016480Cucurbita moschata (Rifu)cmowcgB755
ClCG01G016480Cucurbita moschata (Rifu)cmowcgB575
ClCG01G016480Wild cucumber (PI 183967)cpiwcgB124
ClCG01G016480Cucumber (Chinese Long) v2cuwcgB538
ClCG01G016480Cucumber (Chinese Long) v2cuwcgB117
ClCG01G016480Cucumber (Chinese Long) v2cuwcgB118
ClCG01G016480Melon (DHL92) v3.5.1mewcgB193
ClCG01G016480Melon (DHL92) v3.5.1mewcgB280
ClCG01G016480Watermelon (97103) v1wcgwmB117
ClCG01G016480Watermelon (97103) v1wcgwmB121
ClCG01G016480Watermelon (97103) v1wcgwmB162
ClCG01G016480Cucurbita pepo (Zucchini)cpewcgB425
ClCG01G016480Bottle gourd (USVL1VR-Ls)lsiwcgB090
ClCG01G016480Cucumber (Gy14) v2cgybwcgB114
ClCG01G016480Melon (DHL92) v3.6.1medwcgB270
ClCG01G016480Melon (DHL92) v3.6.1medwcgB509
ClCG01G016480Silver-seed gourdcarwcgB0173
ClCG01G016480Silver-seed gourdcarwcgB0778
ClCG01G016480Silver-seed gourdcarwcgB0867
ClCG01G016480Cucumber (Chinese Long) v3cucwcgB132
ClCG01G016480Watermelon (97103) v2wcgwmbB123
ClCG01G016480Watermelon (97103) v2wcgwmbB128