ClCG01G015930 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G015930
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	WRKY transcription factor
Location	CG_Chr01 : 30234562 .. 30235489 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGTCATCGGCGTCGGAAGAAGAGATAATGGTGAGTCTATTCCAAGCAGATCAAGAGGCGGCCGCCGTGAACGCCGCCGCTATCACCACCAATTTCATATCTTTTCCAGAAGCCAACAACAACAACAACAACAATAACGTTGTTGTTCAACAATCCTTGAAACCCTTTTCCTTCAGTACTCAACACTATTTCTGTCAACAACAACAACAATCCCTTTTCCCTTTTTTCTTCCCTTCAACCACTGCTCCCTCTAATCTCCTTTCCTCTCACAACACACCCTCTTCTTCCTCTCTCTGGTAACTTACGACGTCGTTTTCCTTTTTTCTTTTTTCCTCATCTTCCTCTTATATATTTGTTTTATGACATCCCCATATGCGACTTTTGCACGATCAAAGTAATTTTAATCATCATAAAATGCATGGGTAAGGTTTTTATTTACAACATATGAGATCTCAATGTATTTTCTTAAAATTCTTTTGGATTCATCCTTTCTAGGTTGGGAATAATTTTAAAATTGTTAAAATTGTTAATTTCTAAAATTAAATCACTGATTTTAACAGTCAAAATCAAATTTAAAAGTATGAAATTGATTTTGAGTGATTAAAAATGTATGGATTGCACTAAATATCTGAAACGGATATTGTTATTATTATTTTAATTATTTGACAGGGATGAAAAGGAGAGGTTTATGAGAGGGAGAAATAATGGGATTGGAAATTATGTTGGTGACGACGACAACGACGATGACTGTAAGCCGCGGTTGAGGGTGTCGACGATGAAGATGAAGAGGATAAAAGGGAGGAAGAAAGTGAGAGAGCCAAGATTCAGCTTCAAGACCATGACGGATGTGGATGTTCTTGACGATGGTTACAAATGGAGAAAGTACGGCCAAAAAGTTGTGAAGAACACCCTCCATCCAAGGTAA

mRNA sequence

ATGAGGTCATCGGCGTCGGAAGAAGAGATAATGGTGAGTCTATTCCAAGCAGATCAAGAGGCGGCCGCCGTGAACGCCGCCGCTATCACCACCAATTTCATATCTTTTCCAGAAGCCAACAACAACAACAACAACAATAACGTTGTTGTTCAACAATCCTTGAAACCCTTTTCCTTCAGTACTCAACACTATTTCTGTCAACAACAACAACAATCCCTTTTCCCTTTTTTCTTCCCTTCAACCACTGCTCCCTCTAATCTCCTTTCCTCTCACAACACACCCTCTTCTTCCTCTCTCTGGGATGAAAAGGAGAGGTTTATGAGAGGGAGAAATAATGGGATTGGAAATTATGTTGGTGACGACGACAACGACGATGACTGTAAGCCGCGGTTGAGGGTGTCGACGATGAAGATGAAGAGGATAAAAGGGAGGAAGAAAGTGAGAGAGCCAAGATTCAGCTTCAAGACCATGACGGATGTGGATGTTCTTGACGATGGTTACAAATGGAGAAAGTACGGCCAAAAAGTTGTGAAGAACACCCTCCATCCAAGGTAA

Coding sequence (CDS)

ATGAGGTCATCGGCGTCGGAAGAAGAGATAATGGTGAGTCTATTCCAAGCAGATCAAGAGGCGGCCGCCGTGAACGCCGCCGCTATCACCACCAATTTCATATCTTTTCCAGAAGCCAACAACAACAACAACAACAATAACGTTGTTGTTCAACAATCCTTGAAACCCTTTTCCTTCAGTACTCAACACTATTTCTGTCAACAACAACAACAATCCCTTTTCCCTTTTTTCTTCCCTTCAACCACTGCTCCCTCTAATCTCCTTTCCTCTCACAACACACCCTCTTCTTCCTCTCTCTGGGATGAAAAGGAGAGGTTTATGAGAGGGAGAAATAATGGGATTGGAAATTATGTTGGTGACGACGACAACGACGATGACTGTAAGCCGCGGTTGAGGGTGTCGACGATGAAGATGAAGAGGATAAAAGGGAGGAAGAAAGTGAGAGAGCCAAGATTCAGCTTCAAGACCATGACGGATGTGGATGTTCTTGACGATGGTTACAAATGGAGAAAGTACGGCCAAAAAGTTGTGAAGAACACCCTCCATCCAAGGTAA

Protein sequence

MRSSASEEEIMVSLFQADQEAAAVNAAAITTNFISFPEANNNNNNNNVVVQQSLKPFSFSTQHYFCQQQQQSLFPFFFPSTTAPSNLLSSHNTPSSSSLWDEKERFMRGRNNGIGNYVGDDDNDDDCKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR

Homology

[Close]

BLAST of ClCG01G015930 vs. Swiss-Prot
Match: WRK13_ARATH (Probable WRKY transcription factor 13 OS=Arabidopsis thaliana GN=WRKY13 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 3.2e-18
Identity = 52/125 (41.60%), Postives = 67/125 (53.60%), Query Frame = 1


Query: 88  LSSHNTPSSSSLWDEKERFMRGRNNGIGNYVGDDDNDDDC------------------KP 147
           +SS    S+   W  +  +   + N  G+ +  DDNDD+                    P
Sbjct: 119 ISSQRPLSNPWAWSCQAGYGSSQKNNHGSEIDVDDNDDEVGDGGGINDDDNGRHHHHDTP 178

Query: 148 RLR----------VSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKN 185
                        VS++KMK++K R+KVREPRF FKT+++VDVLDDGY+WRKYGQKVVKN
Sbjct: 179 SRHDKHNTASLGVVSSLKMKKLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKN 238

[Close]

BLAST of ClCG01G015930 vs. Swiss-Prot
Match: WRK12_ARATH (Probable WRKY transcription factor 12 OS=Arabidopsis thaliana GN=WRKY12 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.9e-16
Identity = 57/132 (43.18%), Postives = 69/132 (52.27%), Query Frame = 1


Query: 64  YFCQQQQQSLFPFFFP--------STTAP---SNLLSSHNTPSSSSLWDEKERFMRGRNN 123
           +F      SL    FP        +T AP   SN L       S  + D++E F  G NN
Sbjct: 42  FFSSSSSSSLSSPSFPIHNSSSTTTTHAPLGFSNNLQGGGPLGSKVVNDDQENFGGGTNN 101

Query: 124 GIGNYVGDDDNDDDCKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKY 183
                  D  ++   +       MK K +K R+K+REPRF F+T +DVDVLDDGYKWRKY
Sbjct: 102 -------DAHSNSWWRSNSGSGDMKNK-VKIRRKLREPRFCFQTKSDVDVLDDGYKWRKY 161

Query: 184 GQKVVKNTLHPR 185
           GQKVVKN+LHPR
Sbjct: 162 GQKVVKNSLHPR 165

[Close]

BLAST of ClCG01G015930 vs. Swiss-Prot
Match: WRK48_ARATH (Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.6e-14
Identity = 57/182 (31.32%), Postives = 83/182 (45.60%), Query Frame = 1


Query: 3   SSASEEEIMVSLFQADQEAAAVNAAAITTNFISFPEANNNNNNNNVVVQQSLKPFSFSTQ 62
           SS +    +  L Q  Q A++ N+++ +  F +FP  NNNNN             SF T 
Sbjct: 87  SSNNPNSFLDLLRQDHQFASSSNSSSFS--FDAFPLPNNNNNT------------SFFTD 146

Query: 63  HYFCQQQQQSLFPFFFPSTTAPSNLLSSHNTPSSSSLWDEKERFMRGRNNGIGNYVGDDD 122
               Q +   +        T P++       P+S+S+           N+G    V D +
Sbjct: 147 LPLPQAESSEVV------NTTPTS-------PNSTSVSSSSNEAANDNNSGKEVTVKDQE 206

Query: 123 NDDDCKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLH 182
             D  + +         + K +KK RE RF+F T +D+D LDDGY+WRKYGQK VKN+ +
Sbjct: 207 EGDQQQEQKGTKPQLKAKKKNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPY 241

Query: 183 PR 185
           PR
Sbjct: 267 PR 241

[Close]

BLAST of ClCG01G015930 vs. Swiss-Prot
Match: WRK33_ARATH (Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.7e-11
Identity = 44/121 (36.36%), Postives = 64/121 (52.89%), Query Frame = 1


Query: 86  NLLSSHNTPSSSSLWDEKERF-MRGRNNGIGNYVGDDD----------NDDDCKPRLRVS 145
           N  +S + P+S++ + + + F M+  +N   + VGDD+          +++DC      S
Sbjct: 267 NRQASSDQPNSNNSFHQSDSFGMQQEDNTTSDSVGDDEFEQGSSIVSRDEEDCG-----S 326

Query: 146 TMKMKRIKG-----------RKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHP 185
             + KR KG            K VREPR   +T +D+D+LDDGY+WRKYGQKVVK   +P
Sbjct: 327 EPEAKRWKGDNETNGGNGGGSKTVREPRIVVQTTSDIDILDDGYRWRKYGQKVVKGNPNP 382

HSP 2 Score: 36.6 bits (83), Expect = 3.5e-01
Identity = 14/21 (66.67%), Postives = 15/21 (71.43%), Query Frame = 1


Query: 164 DDGYKWRKYGQKVVKNTLHPR 185
           +DGY WRKYGQK VK + +PR
Sbjct: 184 EDGYNWRKYGQKQVKGSENPR 204

[Close]

BLAST of ClCG01G015930 vs. Swiss-Prot
Match: WRK56_ARATH (Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.2e-11
Identity = 44/109 (40.37%), Postives = 55/109 (50.46%), Query Frame = 1


Query: 83  APSNLLSSHNTPSSSS-------LWDEKERFMRGRNNGIGNYVGDDDNDDDCKPRLRVST 142
           APS + S    PSSSS       L  + E F RG    +G  V ++ N+ D         
Sbjct: 34  APSLIFSGDVGPSSSSCTPAGYHLSAQLENF-RGGGGEMGGLVSNNSNNSD-------HN 93

Query: 143 MKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR 185
               + KG++ +   R +F T +D DVLDDGY+WRKYGQK VKN  HPR
Sbjct: 94  KNCNKGKGKRTLAMQRIAFHTRSDDDVLDDGYRWRKYGQKSVKNNAHPR 134

[Close]

BLAST of ClCG01G015930 vs. TrEMBL
Match: A0A0A0KFC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486880 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 2.5e-62
Identity = 142/189 (75.13%), Postives = 151/189 (79.89%), Query Frame = 1


Query: 1   MRSSASEEEIMVSLFQA-DQEAAAVNAAAITTNFISFPEANNNNNNNNVVVQQSLKPFSF 60
           M SSASEEE+MV L +  DQ AAAVNAAAITTN I  PE NNN NN   VVQQSLKP  F
Sbjct: 1   MGSSASEEEMMVRLLKGGDQVAAAVNAAAITTNLICLPE-NNNKNNIISVVQQSLKPLFF 60

Query: 61  STQHYFCQQQ-QQSLFPFFFPSTTAPSNLLSSHNTPSSSSLWDEKE-RFMRGRNNGIGNY 120
           +T H+  QQQ QQSLFPF FPSTT  S+LL S    S SSLWDE+   FMRGRN  IGNY
Sbjct: 61  TTTHHHHQQQEQQSLFPFCFPSTTTTSHLLPS----SPSSLWDERGVSFMRGRN-AIGNY 120

Query: 121 VGDDD--NDDDCKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQK 180
            G+DD  N++D KPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQK
Sbjct: 121 GGEDDHNNENDGKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQK 180

Query: 181 VVKNTLHPR 185
           VVKNTLHPR
Sbjct: 181 VVKNTLHPR 183

[Close]

BLAST of ClCG01G015930 vs. TrEMBL
Match: E7CEY0_CUCSA (WRKY protein OS=Cucumis sativus GN=WRKY43 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-31
Identity = 72/81 (88.89%), Postives = 75/81 (92.59%), Query Frame = 1


Query: 106 FMRGRNNGIGNYVGDDD--NDDDCKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVL 165
           FMRGRN  IGNY G+DD  N++D KPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVL
Sbjct: 22  FMRGRN-AIGNYGGEDDHNNENDGKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVL 81

Query: 166 DDGYKWRKYGQKVVKNTLHPR 185
           DDGYKWRKYGQKVVKNTLHPR
Sbjct: 82  DDGYKWRKYGQKVVKNTLHPR 101

[Close]

BLAST of ClCG01G015930 vs. TrEMBL
Match: W9QLH3_9ROSA (Putative WRKY transcription factor 13 OS=Morus notabilis GN=L484_005172 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.0e-23
Identity = 80/202 (39.60%), Postives = 106/202 (52.48%), Query Frame = 1


Query: 5   ASEEEIMVS---LFQADQEAAAVNAAAIT----------------TNFISFPEANNNNNN 64
           AS  + M++   LF+ DQEA        +                 NF S P + NNN +
Sbjct: 2   ASTSQAMINNQGLFEDDQEAPVTQMGFFSFPSNMAHPQLSPLGCLKNF-SIPCSTNNNIS 61

Query: 65  NNVVVQQSLKPFSFSTQHYFCQQQQQSLFPFFFPSTT--APSNLLSSHNTPSSSSLWDEK 124
            N+ + ++L   S ST         + +    F ++       LLS   + ++   W E 
Sbjct: 62  TNINLSETLIS-SLSTTSTTTSSPSKHMREDHFTASDHFGGPQLLSLQRSTANLWSWGEV 121

Query: 125 ERFMRGRNNGIGNYVGDDDNDD-DCKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDV 184
              M  +    G + G +D+DD D    L VS MKMK+IKGR+KVREPRF FKTM++VDV
Sbjct: 122 NECMGNKLRSGGGFNGGEDHDDHDHHHHLGVSAMKMKKIKGRRKVREPRFCFKTMSEVDV 181

[Close]

BLAST of ClCG01G015930 vs. TrEMBL
Match: A0A0J8CB51_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g133580 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-23
Identity = 78/172 (45.35%), Postives = 93/172 (54.07%), Query Frame = 1


Query: 30  TTNFISFPEANNNNN----NNNVVVQQSLKPFSFSTQHYFCQQQQQSLFPFFFPSTTAPS 89
           +TN  +F    N+NN    +N++    SL P SF+  H       Q+L     P      
Sbjct: 26  STNLTNFSPLVNSNNQHHQSNDLKPFNSLLPSSFALDHV-TSTLTQALLSSTTPKLREED 85

Query: 90  NLLSS--HNTPSSSSL-----------WDEKERFMRGRNNGIGNYVGDDDNDDDCKPRLR 149
            + SS  +N P   SL           W E + F  G +    N      N D   P L 
Sbjct: 86  YISSSSYNNFPPLFSLQKPTPNYNLWSWGEGKEFQLGGSKRSCN------NGDHQDPLLG 145

Query: 150 VSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR 185
           VSTMKMK+IK R+KVREPRF FKTM+DVDVLDDGYKWRKYGQKVVKNTLHPR
Sbjct: 146 VSTMKMKKIKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPR 190

[Close]

BLAST of ClCG01G015930 vs. TrEMBL
Match: E7CEY7_CUCSA (WRKY protein OS=Cucumis sativus GN=WRKY53 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-22
Identity = 67/150 (44.67%), Postives = 88/150 (58.67%), Query Frame = 1


Query: 40  NNNNNNNNV---VVQQSLKPFSFSTQHYFCQQQQQSLFPFFFPSTTAPSNLLSSHNTPSS 99
           NNNNN+NN+   ++  S+ P   S  +                   AP +LLS   +  +
Sbjct: 60  NNNNNSNNLSETLLSSSILPLKSSISYEL-----------------APQHLLSLQTSTPN 119

Query: 100 SSLWDE--KERFMRGRNNGIGNYVGDDDNDDDCKPRLRVSTMKMKRIKGRKKVREPRFSF 159
              W E  +   M G+ +         +N+++   +L VS MKMK++KGR+KVREPRFSF
Sbjct: 120 LWPWGEIGERLLMNGKRS---------NNNENYNNQLGVSKMKMKKMKGRRKVREPRFSF 179

Query: 160 KTMTDVDVLDDGYKWRKYGQKVVKNTLHPR 185
           KTM+DVDVLDDGYKWRKYGQKVVKNT HPR
Sbjct: 180 KTMSDVDVLDDGYKWRKYGQKVVKNTQHPR 183

[Close]

BLAST of ClCG01G015930 vs. TAIR10
Match: AT4G39410.1 (AT4G39410.1 WRKY DNA-binding protein 13)

HSP 1 Score: 93.2 bits (230), Expect = 1.8e-19
Identity = 52/125 (41.60%), Postives = 67/125 (53.60%), Query Frame = 1


Query: 88  LSSHNTPSSSSLWDEKERFMRGRNNGIGNYVGDDDNDDDC------------------KP 147
           +SS    S+   W  +  +   + N  G+ +  DDNDD+                    P
Sbjct: 119 ISSQRPLSNPWAWSCQAGYGSSQKNNHGSEIDVDDNDDEVGDGGGINDDDNGRHHHHDTP 178

Query: 148 RLR----------VSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKN 185
                        VS++KMK++K R+KVREPRF FKT+++VDVLDDGY+WRKYGQKVVKN
Sbjct: 179 SRHDKHNTASLGVVSSLKMKKLKTRRKVREPRFCFKTLSEVDVLDDGYRWRKYGQKVVKN 238

[Close]

BLAST of ClCG01G015930 vs. TAIR10
Match: AT2G44745.1 (AT2G44745.1 WRKY family transcription factor)

HSP 1 Score: 86.3 bits (212), Expect = 2.2e-17
Identity = 57/132 (43.18%), Postives = 69/132 (52.27%), Query Frame = 1


Query: 64  YFCQQQQQSLFPFFFP--------STTAP---SNLLSSHNTPSSSSLWDEKERFMRGRNN 123
           +F      SL    FP        +T AP   SN L       S  + D++E F  G NN
Sbjct: 42  FFSSSSSSSLSSPSFPIHNSSSTTTTHAPLGFSNNLQGGGPLGSKVVNDDQENFGGGTNN 101

Query: 124 GIGNYVGDDDNDDDCKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKY 183
                  D  ++   +       MK K +K R+K+REPRF F+T +DVDVLDDGYKWRKY
Sbjct: 102 -------DAHSNSWWRSNSGSGDMKNK-VKIRRKLREPRFCFQTKSDVDVLDDGYKWRKY 161

Query: 184 GQKVVKNTLHPR 185
           GQKVVKN+LHPR
Sbjct: 162 GQKVVKNSLHPR 165

[Close]

BLAST of ClCG01G015930 vs. TAIR10
Match: AT5G49520.1 (AT5G49520.1 WRKY DNA-binding protein 48)

HSP 1 Score: 79.7 bits (195), Expect = 2.0e-15
Identity = 57/182 (31.32%), Postives = 83/182 (45.60%), Query Frame = 1


Query: 3   SSASEEEIMVSLFQADQEAAAVNAAAITTNFISFPEANNNNNNNNVVVQQSLKPFSFSTQ 62
           SS +    +  L Q  Q A++ N+++ +  F +FP  NNNNN             SF T 
Sbjct: 87  SSNNPNSFLDLLRQDHQFASSSNSSSFS--FDAFPLPNNNNNT------------SFFTD 146

Query: 63  HYFCQQQQQSLFPFFFPSTTAPSNLLSSHNTPSSSSLWDEKERFMRGRNNGIGNYVGDDD 122
               Q +   +        T P++       P+S+S+           N+G    V D +
Sbjct: 147 LPLPQAESSEVV------NTTPTS-------PNSTSVSSSSNEAANDNNSGKEVTVKDQE 206

Query: 123 NDDDCKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLH 182
             D  + +         + K +KK RE RF+F T +D+D LDDGY+WRKYGQK VKN+ +
Sbjct: 207 EGDQQQEQKGTKPQLKAKKKNQKKAREARFAFLTKSDIDNLDDGYRWRKYGQKAVKNSPY 241

Query: 183 PR 185
           PR
Sbjct: 267 PR 241

[Close]

BLAST of ClCG01G015930 vs. TAIR10
Match: AT2G38470.1 (AT2G38470.1 WRKY DNA-binding protein 33)

HSP 1 Score: 70.9 bits (172), Expect = 9.5e-13
Identity = 44/121 (36.36%), Postives = 64/121 (52.89%), Query Frame = 1


Query: 86  NLLSSHNTPSSSSLWDEKERF-MRGRNNGIGNYVGDDD----------NDDDCKPRLRVS 145
           N  +S + P+S++ + + + F M+  +N   + VGDD+          +++DC      S
Sbjct: 267 NRQASSDQPNSNNSFHQSDSFGMQQEDNTTSDSVGDDEFEQGSSIVSRDEEDCG-----S 326

Query: 146 TMKMKRIKG-----------RKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHP 185
             + KR KG            K VREPR   +T +D+D+LDDGY+WRKYGQKVVK   +P
Sbjct: 327 EPEAKRWKGDNETNGGNGGGSKTVREPRIVVQTTSDIDILDDGYRWRKYGQKVVKGNPNP 382

HSP 2 Score: 36.6 bits (83), Expect = 2.0e-02
Identity = 14/21 (66.67%), Postives = 15/21 (71.43%), Query Frame = 1


Query: 164 DDGYKWRKYGQKVVKNTLHPR 185
           +DGY WRKYGQK VK + +PR
Sbjct: 184 EDGYNWRKYGQKQVKGSENPR 204

[Close]

BLAST of ClCG01G015930 vs. TAIR10
Match: AT1G64000.1 (AT1G64000.1 WRKY DNA-binding protein 56)

HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12
Identity = 44/109 (40.37%), Postives = 55/109 (50.46%), Query Frame = 1


Query: 83  APSNLLSSHNTPSSSS-------LWDEKERFMRGRNNGIGNYVGDDDNDDDCKPRLRVST 142
           APS + S    PSSSS       L  + E F RG    +G  V ++ N+ D         
Sbjct: 34  APSLIFSGDVGPSSSSCTPAGYHLSAQLENF-RGGGGEMGGLVSNNSNNSD-------HN 93

Query: 143 MKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR 185
               + KG++ +   R +F T +D DVLDDGY+WRKYGQK VKN  HPR
Sbjct: 94  KNCNKGKGKRTLAMQRIAFHTRSDDDVLDDGYRWRKYGQKSVKNNAHPR 134

[Close]

BLAST of ClCG01G015930 vs. NCBI nr
Match: gi|659079187|ref|XP_008440122.1| (PREDICTED: probable WRKY transcription factor 12 [Cucumis melo])

HSP 1 Score: 249.2 bits (635), Expect = 5.5e-63
Identity = 137/185 (74.05%), Postives = 148/185 (80.00%), Query Frame = 1


Query: 1   MRSSASEEEIMVSLFQADQEAAAVNAAAITTNFISFPEANNNNNNNNVVVQQSLKPFSFS 60
           M SSASEEE++VSL Q   + AA   AA+TTN I  PE NNNNNN   VVQQSLKP  F+
Sbjct: 1   MGSSASEEEMIVSLLQGGDQVAA---AAVTTNLICLPENNNNNNNFINVVQQSLKPLFFT 60

Query: 61  TQHYFCQQQQQSLFPFFFPSTTAPSNLLSSHNTPSSSSLWDEKE-RFMRGRNNGIGNYVG 120
           T H+  QQQQQSLFPF FPSTT  S+LL+S    S SSLWDE+   FMRGRN  IGNY G
Sbjct: 61  TTHHH-QQQQQSLFPFCFPSTTTTSHLLTS----SPSSLWDERGLSFMRGRN-AIGNYGG 120

Query: 121 DDDNDDDCKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKN 180
           DDD ++D KPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKN
Sbjct: 121 DDDKENDGKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKN 176

Query: 181 TLHPR 185
           TLHPR
Sbjct: 181 TLHPR 176

[Close]

BLAST of ClCG01G015930 vs. NCBI nr
Match: gi|778708879|ref|XP_011656304.1| (PREDICTED: probable WRKY transcription factor 13-like isoform X1 [Cucumis sativus])

HSP 1 Score: 246.5 bits (628), Expect = 3.6e-62
Identity = 142/189 (75.13%), Postives = 151/189 (79.89%), Query Frame = 1


Query: 1   MRSSASEEEIMVSLFQA-DQEAAAVNAAAITTNFISFPEANNNNNNNNVVVQQSLKPFSF 60
           M SSASEEE+MV L +  DQ AAAVNAAAITTN I  PE NNN NN   VVQQSLKP  F
Sbjct: 1   MGSSASEEEMMVRLLKGGDQVAAAVNAAAITTNLICLPE-NNNKNNIISVVQQSLKPLFF 60

Query: 61  STQHYFCQQQ-QQSLFPFFFPSTTAPSNLLSSHNTPSSSSLWDEKE-RFMRGRNNGIGNY 120
           +T H+  QQQ QQSLFPF FPSTT  S+LL S    S SSLWDE+   FMRGRN  IGNY
Sbjct: 61  TTTHHHHQQQEQQSLFPFCFPSTTTTSHLLPS----SPSSLWDERGVSFMRGRN-AIGNY 120

Query: 121 VGDDD--NDDDCKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQK 180
            G+DD  N++D KPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQK
Sbjct: 121 GGEDDHNNENDGKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQK 180

Query: 181 VVKNTLHPR 185
           VVKNTLHPR
Sbjct: 181 VVKNTLHPR 183

[Close]

BLAST of ClCG01G015930 vs. NCBI nr
Match: gi|525507051|ref|NP_001267570.1| (probable WRKY transcription factor 13-like [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 2.5e-31
Identity = 72/81 (88.89%), Postives = 75/81 (92.59%), Query Frame = 1


Query: 106 FMRGRNNGIGNYVGDDD--NDDDCKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVL 165
           FMRGRN  IGNY G+DD  N++D KPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVL
Sbjct: 22  FMRGRN-AIGNYGGEDDHNNENDGKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDVL 81

Query: 166 DDGYKWRKYGQKVVKNTLHPR 185
           DDGYKWRKYGQKVVKNTLHPR
Sbjct: 82  DDGYKWRKYGQKVVKNTLHPR 101

[Close]

BLAST of ClCG01G015930 vs. NCBI nr
Match: gi|703063224|ref|XP_010086912.1| (putative WRKY transcription factor 13 [Morus notabilis])

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-23
Identity = 80/202 (39.60%), Postives = 106/202 (52.48%), Query Frame = 1


Query: 5   ASEEEIMVS---LFQADQEAAAVNAAAIT----------------TNFISFPEANNNNNN 64
           AS  + M++   LF+ DQEA        +                 NF S P + NNN +
Sbjct: 2   ASTSQAMINNQGLFEDDQEAPVTQMGFFSFPSNMAHPQLSPLGCLKNF-SIPCSTNNNIS 61

Query: 65  NNVVVQQSLKPFSFSTQHYFCQQQQQSLFPFFFPSTT--APSNLLSSHNTPSSSSLWDEK 124
            N+ + ++L   S ST         + +    F ++       LLS   + ++   W E 
Sbjct: 62  TNINLSETLIS-SLSTTSTTTSSPSKHMREDHFTASDHFGGPQLLSLQRSTANLWSWGEV 121

Query: 125 ERFMRGRNNGIGNYVGDDDNDD-DCKPRLRVSTMKMKRIKGRKKVREPRFSFKTMTDVDV 184
              M  +    G + G +D+DD D    L VS MKMK+IKGR+KVREPRF FKTM++VDV
Sbjct: 122 NECMGNKLRSGGGFNGGEDHDDHDHHHHLGVSAMKMKKIKGRRKVREPRFCFKTMSEVDV 181

[Close]

BLAST of ClCG01G015930 vs. NCBI nr
Match: gi|731338434|ref|XP_010680328.1| (PREDICTED: probable WRKY transcription factor 13 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 117.9 bits (294), Expect = 1.9e-23
Identity = 78/172 (45.35%), Postives = 93/172 (54.07%), Query Frame = 1


Query: 30  TTNFISFPEANNNNN----NNNVVVQQSLKPFSFSTQHYFCQQQQQSLFPFFFPSTTAPS 89
           +TN  +F    N+NN    +N++    SL P SF+  H       Q+L     P      
Sbjct: 26  STNLTNFSPLVNSNNQHHQSNDLKPFNSLLPSSFALDHV-TSTLTQALLSSTTPKLREED 85

Query: 90  NLLSS--HNTPSSSSL-----------WDEKERFMRGRNNGIGNYVGDDDNDDDCKPRLR 149
            + SS  +N P   SL           W E + F  G +    N      N D   P L 
Sbjct: 86  YISSSSYNNFPPLFSLQKPTPNYNLWSWGEGKEFQLGGSKRSCN------NGDHQDPLLG 145

Query: 150 VSTMKMKRIKGRKKVREPRFSFKTMTDVDVLDDGYKWRKYGQKVVKNTLHPR 185
           VSTMKMK+IK R+KVREPRF FKTM+DVDVLDDGYKWRKYGQKVVKNTLHPR
Sbjct: 146 VSTMKMKKIKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTLHPR 190

The following BLAST results are available for this feature:

BLAST of ClCG01G015930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
WRK13_ARATH	3.2e-18	41.60	Probable WRKY transcription factor 13 OS=Arabidopsis thaliana GN=WRKY13 PE=2 SV=...	[more]
WRK12_ARATH	3.9e-16	43.18	Probable WRKY transcription factor 12 OS=Arabidopsis thaliana GN=WRKY12 PE=2 SV=...	[more]
WRK48_ARATH	3.6e-14	31.32	Probable WRKY transcription factor 48 OS=Arabidopsis thaliana GN=WRKY48 PE=2 SV=...	[more]
WRK33_ARATH	1.7e-11	36.36	Probable WRKY transcription factor 33 OS=Arabidopsis thaliana GN=WRKY33 PE=1 SV=...	[more]
WRK56_ARATH	2.2e-11	40.37	Probable WRKY transcription factor 56 OS=Arabidopsis thaliana GN=WRKY56 PE=2 SV=...	[more]

BLAST of ClCG01G015930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFC7_CUCSA	2.5e-62	75.13	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486880 PE=4 SV=1	[more]
E7CEY0_CUCSA	1.7e-31	88.89	WRKY protein OS=Cucumis sativus GN=WRKY43 PE=2 SV=1	[more]
W9QLH3_9ROSA	1.0e-23	39.60	Putative WRKY transcription factor 13 OS=Morus notabilis GN=L484_005172 PE=4 SV=...	[more]
A0A0J8CB51_BETVU	1.3e-23	45.35	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g133580 PE=4 S...	[more]
E7CEY7_CUCSA	1.1e-22	44.67	WRKY protein OS=Cucumis sativus GN=WRKY53 PE=2 SV=1	[more]

BLAST of ClCG01G015930 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39410.1	1.8e-19	41.60	WRKY DNA-binding protein 13	[more]
AT2G44745.1	2.2e-17	43.18	WRKY family transcription factor	[more]
AT5G49520.1	2.0e-15	31.32	WRKY DNA-binding protein 48	[more]
AT2G38470.1	9.5e-13	36.36	WRKY DNA-binding protein 33	[more]
AT1G64000.1	1.2e-12	40.37	WRKY DNA-binding protein 56	[more]

BLAST of ClCG01G015930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079187\|ref\|XP_008440122.1\|	5.5e-63	74.05	PREDICTED: probable WRKY transcription factor 12 [Cucumis melo]	[more]
gi\|778708879\|ref\|XP_011656304.1\|	3.6e-62	75.13	PREDICTED: probable WRKY transcription factor 13-like isoform X1 [Cucumis sativu...	[more]
gi\|525507051\|ref\|NP_001267570.1\|	2.5e-31	88.89	probable WRKY transcription factor 13-like [Cucumis sativus]	[more]
gi\|703063224\|ref\|XP_010086912.1\|	1.5e-23	39.60	putative WRKY transcription factor 13 [Morus notabilis]	[more]
gi\|731338434\|ref\|XP_010680328.1\|	1.9e-23	45.35	PREDICTED: probable WRKY transcription factor 13 [Beta vulgaris subsp. vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003657	WRKY_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003700	transcription factor activity, sequence-specific DNA binding
GO:0043565	sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0044212	transcription regulatory region DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G015930.1	ClCG01G015930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	GENE3D	G3DSA:2.20.25.80		coord: 148..184 score: 1.3
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 164..184 score: 1.
IPR003657	WRKY domain	PROFILE	PS50811	WRKY	coord: 158..184 score: 13
IPR003657	WRKY domain	unknown	SSF118290	WRKY DNA-binding domain	coord: 155..184 score: 2.6
None	No IPR available	PANTHER	PTHR31221	FAMILY NOT NAMED	coord: 63..184 score: 1.1E-35coord: 32..44 score: 1.1
None	No IPR available	PANTHER	PTHR31221:SF17	WRKY TRANSCRIPTION FACTOR 13-RELATED	coord: 63..184 score: 1.1E-35coord: 32..44 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G015930	Csa6G486880	Cucumber (Chinese Long) v2	cuwcgB432
ClCG01G015930	MELO3C007458	Melon (DHL92) v3.5.1	mewcgB514
ClCG01G015930	Cla008480	Watermelon (97103) v1	wcgwmB153
ClCG01G015930	Cla97C02G027320	Watermelon (97103) v2	wcgwmbB100
ClCG01G015930	Bhi10G001884	Wax gourd	wcgwgoB222
ClCG01G015930	CSPI02G15210	Wild cucumber (PI 183967)	cpiwcgB123
ClCG01G015930	Cucsa.250310	Cucumber (Gy14) v1	cgywcgB439
ClCG01G015930	CmaCh02G005920	Cucurbita maxima (Rimu)	cmawcgB521
ClCG01G015930	CmaCh20G011050	Cucurbita maxima (Rimu)	cmawcgB479
ClCG01G015930	CmaCh03G010520	Cucurbita maxima (Rimu)	cmawcgB579
ClCG01G015930	CmoCh02G005990	Cucurbita moschata (Rifu)	cmowcgB519
ClCG01G015930	CmoCh03G010490	Cucurbita moschata (Rifu)	cmowcgB575
ClCG01G015930	CmoCh20G011350	Cucurbita moschata (Rifu)	cmowcgB478
ClCG01G015930	Lsi01G011030	Bottle gourd (USVL1VR-Ls)	lsiwcgB127
ClCG01G015930	Cp4.1LG10g03040	Cucurbita pepo (Zucchini)	cpewcgB061
ClCG01G015930	Cp4.1LG05g10850	Cucurbita pepo (Zucchini)	cpewcgB643
ClCG01G015930	CsGy2G015200	Cucumber (Gy14) v2	cgybwcgB113
ClCG01G015930	MELO3C007458.2	Melon (DHL92) v3.6.1	medwcgB509
ClCG01G015930	MELO3C020967.2	Melon (DHL92) v3.6.1	medwcgB082
ClCG01G015930	Carg00909	Silver-seed gourd	carwcgB0397
ClCG01G015930	CsaV3_2G017760	Cucumber (Chinese Long) v3	cucwcgB131

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
ClCG01G015930	ClCG02G000930	Watermelon (Charleston Gray)	wcgwcgB087

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G015930	Cucurbita pepo (Zucchini)	cpewcgB425
ClCG01G015930	Cucumber (Gy14) v2	cgybwcgB399
ClCG01G015930	Silver-seed gourd	carwcgB0778
ClCG01G015930	Cucumber (Chinese Long) v3	cucwcgB455
ClCG01G015930	Watermelon (97103) v2	wcgwmbB089
ClCG01G015930	Wax gourd	wcgwgoB225
ClCG01G015930	Cucumber (Gy14) v1	cgywcgB134
ClCG01G015930	Cucurbita maxima (Rimu)	cmawcgB754
ClCG01G015930	Cucurbita moschata (Rifu)	cmowcgB755
ClCG01G015930	Wild cucumber (PI 183967)	cpiwcgB453
ClCG01G015930	Cucumber (Chinese Long) v2	cuwcgB116
ClCG01G015930	Melon (DHL92) v3.5.1	mewcgB084