ClCG01G014550 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G014550
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionRetroelement pol polyprotein-like
LocationCG_Chr01 : 28875214 .. 28876956 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATCCACAATGATGTGTGTTGTTTTTGGACATTTAAAGTCAAAAAGTTTATTGGTAATTGCTCGAGAGAATACAACCGTCGTTCATCAGGACCTTTGAAGGAAGAGTAAAACGCAGTTCATTTCCATCTTCCTTGAGCTGAAGGCCAAAGATTTTTAAAATGTAAATTAAATTTCATTAATGATATTAGGTTTTTAATAGTTGTTGGATTGAAGTAGTGGCAACTACAACCAATGATGCAATAGTTGTCAAGAAGTTTCTCGTTAAACACATTTTTAGCATATACAGAATCCCTCAAGCTCCCATCAGTGATGAGGGTATGCACTTTGTCAATATAATCATGACAAGTCTACTCGAGAAATACAATATAAAAGCATTGAATCACCACCGCCTATCATCCCCGAACTAATGGACTTGCAGAATTATCAAATTTGGAAATAAAAGGAATCTTTGAGAAGATTGTTGATCCATCTAGGAAGGACTGATCTTTAGGACTAGATGAAGCCTTATGGGCCTATAGAATAGCTTTTAAAGCTCTGTTGGGGATGAATTCATACAGGATCATATTTGGTAAAGCATGTCATTTATCGCTTTAGTTAGAGCATAAAACATATTGGGAAATGAAGAAGCTAAATATGAGTACATAAGCAGCACAAGAGAAGCAGATGCTACAGTTAAAGAATTAGAAGAGCTTCATTTCCATGCGTGCGAAAATGCTAAACTCAATAAAGAAAGAAAGAAAATGTATGATGATCAAAGAATCAACCCATCAAAATTCCAGGCCACACAGCAAGTGTCATTATTCAACTCCAAATTGAGACTATTTCTTAGAAAGCTGAAGTCCAAATGGTCACCCTTTTTTGAAATTAGCAAAGTATATCCACATGGTGCGGAAGAATTATTGGACACAAATGACGACATGTTTAAGATTAACAGTCAAGGACTGAAGCCCTATTGGGGTGAAGTTACAGATAAAGAAAAGGCTATAATCTCCCTTGTTGAACTAAACTAGGAAGGAAAAGATATTAAATGTACAAGTACATTATGTTGTTTTATTTAATTCTTATGTCTTGTTTTTCATTCATCATTCACTCTTAAAAAAAAAAGTGAGGGAACTCTATCTAGGCTAGTTTTGTCTAAGAGGTACTTAAAATGAATGTAGGGAACACTTCGACCTGAAAATGTACTTGGGAGTTGAATCTATTTGAAAAAGTTGATCTTCAAAGTAACAATTAGCAATTGAGTTGTTTAATCCTCTTCTTTAAGTGTTTCTAGCCACATCACTTGCTCAGCACTCATCTAGAGTTTTTGTTCAATTCGTGCATGTCATGCGGTTGGCTACATGGCTGACCAACTAAAGAGGTTCATGACTCAGTCCCATGACTATTGAGCTTATGTCAGGGCTCGAGATGATGCATTTAAGAGATTCCTAAACTTCGTTATGCCTGGCCACTACCCTGATGTCTTTGCTTTCCCTGACCACATCCTTCATGACCCGTTTGAAGAAGAAGAAGAAAAAGAAAAAGATGATGATATGATGCTCCTGCTTAGACTTAGGGGAGTGTTCTATTCAATTTACATGATTTCAGTAGATAGGTTTTTTTTTTTTTTTTTTAATTTAGTTATTGCTTACTTTTAGTTCTCTAAGTCTAGGTTTGAGGTGGAAACAAAAACAAAAACAAAAAAAAGTTTTCATGATCATGTAAGTTGTAGCATGTTTGTTTTTGTGGTGCAAAGTAA

mRNA sequence

ATGGTATCCACAATGATGTGTGTTGTTTTTGGACATTTAAAGTCAAAAAGTTTATTGGTTTTTAATAGTTGTTGGATTGAAGTAGTGGCAACTACAACCAATGATGCAATAGTTGTCAAGAAGTTTCTCGTTAAACACATTTTTAGCATATACAGAATCCCTCAAGCTCCCATCAGTGATGAGGGACTAGATGAAGCCTTATGGGCCTATAGAATAGCTTTTAAAGCTCTGTTGGGGATGAATTCATACAGGATCATATTTGAAGCTAAATATGAGTACATAAGCAGCACAAGAGAAGCAGATGCTACAGTTAAAGAATTAGAAGAGCTTCATTTCCATGCGTGCGAAAATGCTAAACTCAATAAAGAAAGAAAGAAAATGTATGATGATCAAAGAATCAACCCATCAAAATTCCAGGCCACACAGCAAGTGTCATTATTCAACTCCAAATTGAGACTATTTCTTAGAAAGCTGAAGTCCAAATGGTCACCCTTTTTTGAAATTAGCAAAGTATATCCACATGGTGCGGAAGAATTATTGGACACAAATGACGACATGTTTAAGATTAACAGTCAAGGACTGAAGCCCTATTGGGGTGAAGTTACAGATAAAGAAAAGGCTATAATCTCCCTTAGTTTTTGTTCAATTCGTGCATGTCATGCGGTTGGCTACATGGCTGACCAACTAAAGAGGGCTCGAGATGATGCATTTAAGAGATTCCTAAACTTCGTTATGCCTGGCCACTACCCTGATGTCTTTGCTTTCCCTGACCACATCCTTCATGACCCGTTTGAAGAAGAAGAAGAAAAAGAAAAAGATGATGATATGATGCTCCTGCTTAGACTTAGGGGAGTGTTCTATTCAATTTACATGATTTCACATGTTTGTTTTTGTGGTGCAAAGTAA

Coding sequence (CDS)

ATGGTATCCACAATGATGTGTGTTGTTTTTGGACATTTAAAGTCAAAAAGTTTATTGGTTTTTAATAGTTGTTGGATTGAAGTAGTGGCAACTACAACCAATGATGCAATAGTTGTCAAGAAGTTTCTCGTTAAACACATTTTTAGCATATACAGAATCCCTCAAGCTCCCATCAGTGATGAGGGACTAGATGAAGCCTTATGGGCCTATAGAATAGCTTTTAAAGCTCTGTTGGGGATGAATTCATACAGGATCATATTTGAAGCTAAATATGAGTACATAAGCAGCACAAGAGAAGCAGATGCTACAGTTAAAGAATTAGAAGAGCTTCATTTCCATGCGTGCGAAAATGCTAAACTCAATAAAGAAAGAAAGAAAATGTATGATGATCAAAGAATCAACCCATCAAAATTCCAGGCCACACAGCAAGTGTCATTATTCAACTCCAAATTGAGACTATTTCTTAGAAAGCTGAAGTCCAAATGGTCACCCTTTTTTGAAATTAGCAAAGTATATCCACATGGTGCGGAAGAATTATTGGACACAAATGACGACATGTTTAAGATTAACAGTCAAGGACTGAAGCCCTATTGGGGTGAAGTTACAGATAAAGAAAAGGCTATAATCTCCCTTAGTTTTTGTTCAATTCGTGCATGTCATGCGGTTGGCTACATGGCTGACCAACTAAAGAGGGCTCGAGATGATGCATTTAAGAGATTCCTAAACTTCGTTATGCCTGGCCACTACCCTGATGTCTTTGCTTTCCCTGACCACATCCTTCATGACCCGTTTGAAGAAGAAGAAGAAAAAGAAAAAGATGATGATATGATGCTCCTGCTTAGACTTAGGGGAGTGTTCTATTCAATTTACATGATTTCACATGTTTGTTTTTGTGGTGCAAAGTAA

Protein sequence

MVSTMMCVVFGHLKSKSLLVFNSCWIEVVATTTNDAIVVKKFLVKHIFSIYRIPQAPISDEGLDEALWAYRIAFKALLGMNSYRIIFEAKYEYISSTREADATVKELEELHFHACENAKLNKERKKMYDDQRINPSKFQATQQVSLFNSKLRLFLRKLKSKWSPFFEISKVYPHGAEELLDTNDDMFKINSQGLKPYWGEVTDKEKAIISLSFCSIRACHAVGYMADQLKRARDDAFKRFLNFVMPGHYPDVFAFPDHILHDPFEEEEEKEKDDDMMLLLRLRGVFYSIYMISHVCFCGAK
Homology
[Close]
BLAST of ClCG01G014550 vs. TrEMBL
Match: A0A151SCQ7_CAJCA (Retrovirus-related Pol polyprotein from transposon 412 family OS=Cajanus cajan GN=KK1_025495 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 3.4e-24
Identity = 77/223 (34.53%), Postives = 116/223 (52.02%), Query Frame = 1 

Query: 23  SCWIEVVATTTNDAIVVKKFLVKHIFSIYRIPQAPISDE--------------GLDEALW 82
           S W+E VA   NDA  V KFL K+IFS + +    I                  LD+ALW
Sbjct: 35  SKWVEAVAAQKNDAKTVIKFLKKNIFSRFEVSNREIKRILEKTVNVSRKDWALKLDDALW 94

Query: 83  AYRIAFKALLGMNSYRIIFEA-------------------KYEYISSTREADATVKELEE 142
           AYR A+K  LG++ +++++                      ++   S  +    + ELEE
Sbjct: 95  AYRTAYKTPLGLSPFQMVYGKACHLPVEMEHKAYWAIRFLNFDPTQSVEKRQLQLNELEE 154

Query: 143 LHFHACENAKLNKERKKMYDDQRINPSKFQATQQVSLFNSKLRLFLRKLKSKWSPFFEIS 202
           L  +A E+AK  KER K+Y D++I   +F   Q V L+NS+LRLF  KLKSKWS  F + 
Sbjct: 155 LRLNAYESAKHYKERTKLYHDRKILKREFHPGQLVLLYNSRLRLFPGKLKSKWSGPFRVK 214

Query: 203 KVYPHGAEELLD-TNDDMFKINSQGLKPYWGEVTDKEKAIISL 212
           +V PHGA ++ D ++ + + +N Q LK Y G   ++  + ++L
Sbjct: 215 QVKPHGAIQVEDVSSKESWVVNGQRLKLYLGGEIERAYSTVAL 257

[Close]
BLAST of ClCG01G014550 vs. TrEMBL
Match: A0A151R7V1_CAJCA (Retrovirus-related Pol polyprotein from transposon 412 family OS=Cajanus cajan GN=KK1_040027 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.4e-24
Identity = 81/245 (33.06%), Postives = 118/245 (48.16%), Query Frame = 1 

Query: 19  LVFNSCWIEVVATTTNDAIVVKKFLVKHIFSIYRIPQAPISDEG---------------- 78
           L + S W+E +AT   D   V KFL KHIFS +  P+  ISD G                
Sbjct: 36  LDYVSKWVEAIATPKADGKTVVKFLKKHIFSRFGTPRVLISDGGSHFCNAQLERALEHYG 95

Query: 79  -----------------LDEALWAYRIAFKALLGMNSYRIIFEA---------------- 138
                            LDEALWAYR AFK+ +G+  +++++                  
Sbjct: 96  VHHKKTVSSSRKDWSTKLDEALWAYRTAFKSPIGLTPFQLVYGKACHLPVELEHKAYWAL 155

Query: 139 ---KYEYISSTREADATVKELEELHFHACENAKLNKERKKMYDDQRINPSKFQATQQVSL 198
               ++ +S+  +    +  L+EL   A E++KL KE+ K Y D++I   +F+A Q V L
Sbjct: 156 KLLNFDPLSTGEKRKLELHALDELRLQAYESSKLYKEKVKNYHDKKILKREFRAGQSVLL 215

Query: 199 FNSKLRLFLRKLKSKWSPFFEISKVYPHGAEELLDTN-DDMFKINSQGLKPYWGEVTDKE 211
           FNS+L+LF  KL+ KWS  F + +V P+GA E+ D      + +N Q LKPY G   D+ 
Sbjct: 216 FNSRLKLFPGKLRLKWSGPFRVKEVKPYGAIEIEDPKAQRSWVVNGQRLKPYLGGEVDRL 275

[Close]
BLAST of ClCG01G014550 vs. TrEMBL
Match: A0A151T9S1_CAJCA (Retrovirus-related Pol polyprotein from transposon 412 family OS=Cajanus cajan GN=KK1_018336 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.9e-24
Identity = 78/231 (33.77%), Postives = 113/231 (48.92%), Query Frame = 1 

Query: 23  SCWIEVVATTTNDAIVVKKFLVKHIFSIYRIPQAPISDEG-------------------- 82
           S W+E VAT   DA  V KFL K+IF+ +  P+  ISD G                    
Sbjct: 146 SKWVEAVATQKADARTVIKFLKKNIFTRFGTPRVLISDGGSHFCNTQLKKVLEHYEKTVA 205

Query: 83  ---------LDEALWAYRIAFKALLGMNSYRIIF-------------------EAKYEYI 142
                    LD+ LWAYR A+K  +G++ +++++                      ++  
Sbjct: 206 SSRKDWALKLDDTLWAYRTAYKTPIGLSPFQLVYGKACHLPVELEHKAYWALKALNFDLK 265

Query: 143 SSTREADATVKELEELHFHACENAKLNKERKKMYDDQRINPSKFQATQQVSLFNSKLRLF 202
           ++  +    + ELEE+   A E++++ K + K Y D++I    FQ  QQV LFNS+LRLF
Sbjct: 266 AAGEKRKLQLHELEEMRLQAYESSRIYKSKVKSYHDRKIVQRNFQPGQQVLLFNSRLRLF 325

Query: 203 LRKLKSKWSPFFEISKVYPHGAEELLDTNDD-MFKINSQGLKPYWGEVTDK 205
             KLKSKWS  F I  V P+GA EL + N    + +N Q LKPY G   +K
Sbjct: 326 PGKLKSKWSGPFVIKSVKPYGAGELEEPNSGRSWMVNGQRLKPYLGGEVEK 376

[Close]
BLAST of ClCG01G014550 vs. TrEMBL
Match: A0A151RMQ1_CAJCA (Pol polyprotein OS=Cajanus cajan GN=KK1_034743 PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 8.3e-23
Identity = 77/238 (32.35%), Postives = 123/238 (51.68%), Query Frame = 1 

Query: 10  FGHLKSKSLLVFNSCWIEVVATTTNDAIVVKKFLVKHIFSIYRIPQAPISDEG------- 69
           FG+      + + S W+E  AT TND+ VV  F+  +IF  + +P+  ISD G       
Sbjct: 8   FGYTYILLAVDYVSKWVEAKATKTNDSKVVVDFVRSNIFCRFGVPKPIISDMGSHFCNRS 67

Query: 70  -------LDEALWAYRIAFKALLGMNSYRIIF--------EAKYEYISSTREADAT---- 129
                  L++ALWA+R A++  +GM+ YRI+F        E ++    + +  +      
Sbjct: 68  MKDWSKLLEDALWAHRTAYRTPIGMSPYRIVFGKACHLPVEVEHRAYWAVKNCNLAFDQA 127

Query: 130 -------VKELEELHFHACENAKLNKERKKMYDDQRINPSKFQATQQVSLFNSKLRLFLR 189
                  +++LEEL   A EN+K+ KE+ K + D  +   +F+  QQV LFNS+L+L   
Sbjct: 128 GMQRKLQLQQLEELRLEAYENSKIYKEKVKRFHDSHLLRKEFKVGQQVLLFNSRLKLIAG 187

Query: 190 KLKSKWSPFFEISKVYPHGAEELL-DTNDDMFKINSQGLKPYW--GEVTDKEKAIISL 212
           KL+S+W   F I+ V+ HGA E+  +     FK+N   LK +    ++ DK+   ISL
Sbjct: 188 KLRSRWDGPFVITNVFSHGAVEIKNEVTGKTFKVNGHQLKEFHQSPKLEDKDVEDISL 245

[Close]
BLAST of ClCG01G014550 vs. TrEMBL
Match: A5B5E9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025860 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.4e-22
Identity = 84/246 (34.15%), Postives = 124/246 (50.41%), Query Frame = 1 

Query: 10   FGHLKSKSLLVFNSCWIEVVATTTNDAIVVKKFLVKHIFSIYRIPQAPISDEG------- 69
            FGH      + + S W+E +   +ND  VV KFL ++IFS + +P+A I D G       
Sbjct: 1082 FGHSYILVGVDYVSKWVEAIPCKSNDHKVVLKFLKENIFSRFGVPKAIIIDGGTHFCNKP 1141

Query: 70   ------------------LDEALWAYRIAFKALLGMNSYRIIF--------EAKYEY--- 129
                              L ++LWAYR A+K +LGM  YR+++        E +Y+    
Sbjct: 1142 FETLLAMGSSTRKDWSIKLLDSLWAYRTAYKTILGMPPYRLVYGKACHLPVEVEYKAWWA 1201

Query: 130  -----ISSTR---EADATVKELEELHFHACENAKLNKERKKMYDDQRINPSKFQATQQVS 189
                 +  TR   E    + ELEE+   A  N+K+ KER K + DQ +N   F   Q+V 
Sbjct: 1202 IKKLNMDLTRARLERCLDLNELEEMRNDAYLNSKIAKERLKKWHDQLVNQKNFTKGQRVL 1261

Query: 190  LFNSKLRLFLRKLKSKWSPFFEISKVYPHGAEELLD-TNDDMFKINSQGLKPYWGEVT-D 210
            L++SKL LF  KLKS+W+  F I ++  +G  ELL+  +   FK+N   LKPY    + D
Sbjct: 1262 LYDSKLHLFSGKLKSRWTSPFIIHEMQSNGVVELLNFKSTRTFKVNGHRLKPYIESFSRD 1321

[Close]
BLAST of ClCG01G014550 vs. NCBI nr
Match: gi|922463497|ref|XP_013632520.1| (PREDICTED: uncharacterized protein LOC106337984 [Brassica oleracea var. oleracea])

HSP 1 Score: 132.9 bits (333), Expect = 9.5e-28
Identity = 84/222 (37.84%), Postives = 112/222 (50.45%), Query Frame = 1 

Query: 23  SCWIEVVATTTNDAIVVKKFLVKHIFSIYRIPQAPISD--------------------EG 82
           S W+E +A+ TNDA VV K     IF  + +P+  ISD                      
Sbjct: 165 SKWVEAIASPTNDARVVTKMFKTIIFPRFGVPRVVISDGVVMIINKIFAGLLKKKGVQHK 224

Query: 83  LDEALWAYRIAFKALLGMNSYRIIF--------EAKYEYISSTREADATVK--------- 142
           LD ALWAYR A+K  +G   Y +++        E +Y+   + +  +  +K         
Sbjct: 225 LDNALWAYRTAYKTPIGTTPYNLVYGKACHLPVELEYKTAWAVKLLNFDIKPAAERQSMQ 284

Query: 143 --ELEELHFHACENAKLNKERKKMYDDQRINPSKFQATQQVSLFNSKLRLFLRKLKSKWS 202
             ELEE+   A E +K+ KER K Y D+RI    FQ   QV LFNS+LRLF  KL+SKWS
Sbjct: 285 IHELEEIRHLAYERSKIYKERTKAYHDKRIINCNFQPKDQVLLFNSRLRLFPGKLRSKWS 344

Query: 203 PFFEISKVYPHGAEELLDTNDDMFKINSQGLKPYWGEVTDKE 206
             F I +V+PHGA  LL+T    F +N Q +KPY  E T  E
Sbjct: 345 GPFTIKEVHPHGAVVLLNTKGKEFVVNGQRIKPYLAETTTAE 386

[Close]
BLAST of ClCG01G014550 vs. NCBI nr
Match: gi|698477291|ref|XP_009785879.1| (PREDICTED: uncharacterized protein LOC104234082 [Nicotiana sylvestris])

HSP 1 Score: 130.2 bits (326), Expect = 6.1e-27
Identity = 84/236 (35.59%), Postives = 126/236 (53.39%), Query Frame = 1 

Query: 23  SCWIEVVATTTNDAIVVKKFLVKHIF-------SIYRIPQAPISDEG------LDEALWA 82
           S WIE +A  TNDA+VV  F+ K+IF        I +I +  +S         LD+ALWA
Sbjct: 373 SKWIETIALPTNDAMVVAAFVKKNIFLRFWDSTEIKQILEKRVSVNRKDWAAKLDDALWA 432

Query: 83  YRIAFKALLGMNSYRIIF------------EAKYEYISSTREADAT-------VKELEEL 142
           YR A+K  +G + Y++++            +A +       + +A        + EL+E 
Sbjct: 433 YRTAYKTPIGASPYKLVYGKACHLPVELEHKAYWAIKKLNMDLEAAGEKRLMQLNELDEF 492

Query: 143 HFHACENAKLNKERKKMYDDQRINPSKFQATQQVSLFNSKLRLFLRKLKSKWSPFFEISK 202
             H+ ENA L KE+ K + D+ I P  F+  QQV LFNS+L LF RKLKS+WS  FE+ +
Sbjct: 493 WMHSYENANLYKEKTKRWHDKHIKPRHFEPGQQVLLFNSRLWLFPRKLKSRWSGPFEVVR 552

Query: 203 VYPHGAEELLDTNDD-MFKINSQGLKPYWGEVTDKEKAIISLSFCSIRACHAVGYM 226
           V P+GA EL   N +  F +N   +K YWG + ++EK  + L+  +    H + Y+
Sbjct: 553 VTPYGAIELRALNGERKFLVNGHRVKHYWGGMINREKTKVVLATLNALPNHFMQYI 608

[Close]
BLAST of ClCG01G014550 vs. NCBI nr
Match: gi|923838103|ref|XP_013699880.1| (PREDICTED: uncharacterized protein LOC106403610 [Brassica napus])

HSP 1 Score: 129.8 bits (325), Expect = 8.0e-27
Identity = 83/227 (36.56%), Postives = 119/227 (52.42%), Query Frame = 1 

Query: 14  KSKSLLV---FNSCWIEVVATTTNDAIVVKKFLVKHIFSIYRIPQAPISDEG-------- 73
           K++ +LV   + S W+E VA+ TNDA VV K     IF  + +P+  IS+ G        
Sbjct: 166 KNEYILVAVDYVSNWVEAVASPTNDAKVVTKMFSSIIFPRFGVPRVVISNGGTHFINKPL 225

Query: 74  -LDEALWAYRIAFKALLGMNSYRIIFEA----------------KYEYISSTREADATVK 133
            LD+ALW YR A+K  L    Y +++                   ++   +T      + 
Sbjct: 226 KLDDALWTYRTAYKTPLRTTPYHLVYGKACHLPVEYKAAWAKLLNFDIKPATERRIIQIH 285

Query: 134 ELEELHFHACENAKLNKERKKMYDDQRINPSKFQATQQVSLFNSKLRLFLRKLKSKWSPF 193
           ELE++  HA E++K+ KE+ K Y D+RI   +F+   +V LFNS+L LF  KLKS+WS  
Sbjct: 286 ELEKIRHHAYESSKIYKEKIKAYHDKRIIARRFEPNDKVLLFNSRLWLFPGKLKSRWSGP 345

Query: 194 FEISKVYPHGAEELLDTNDDMFKINSQGLKPYWGEVTDKEKAIISLS 213
           F I +V P+GA ELLD   D F +N Q +K Y  + T  E   I LS
Sbjct: 346 FTIKEVRPYGAVELLDRKGDEFVVNGQRIKHYLADSTIAEGEEIPLS 392

[Close]
BLAST of ClCG01G014550 vs. NCBI nr
Match: gi|727440783|ref|XP_010501857.1| (PREDICTED: uncharacterized protein LOC104779173 [Camelina sativa])

HSP 1 Score: 129.4 bits (324), Expect = 1.0e-26
Identity = 82/234 (35.04%), Postives = 118/234 (50.43%), Query Frame = 1 

Query: 23  SCWIEVVATTTNDAIVVKKFLVKHIFSIYRIPQAPISDEG-------------------- 82
           S W+E +A+ TND+ VV       IF  + +P+  ISD G                    
Sbjct: 40  SKWVEAIASATNDSSVVVMMFKTIIFPRFGVPRVVISDGGKHFINQNLANRFRKNGVLHK 99

Query: 83  ------LDEALWAYRIAFKALLGMNSYRIIF--------EAKYEYISSTREADATVK--- 142
                 LD+ALWAYR AFK  LG   +  ++        E +Y+   + +E +  +K   
Sbjct: 100 KDWSTKLDDALWAYRTAFKTPLGTTPFHNVYGKACHLPVELEYKAAWTVKEWNYDIKSAA 159

Query: 143 --------ELEELHFHACENAKLNKERKKMYDDQRINPSKFQATQQVSLFNSKLRLFLRK 202
                   EL+E+  +A ENA++ KER K Y D++I P  F    QV LFN +L+LF  K
Sbjct: 160 ERRLIQLNELDEIRHNAYENARIYKERTKAYHDKKIIPKSFAPNDQVLLFNCRLKLFPGK 219

Query: 203 LKSKWSPFFEISKVYPHGAEELLDTNDDMFKINSQGLKPYWGEVTDKEKAIISL 212
           L+S+WS  F+I +  P+GA  LL+   + F +N Q LKPY  E+  +E A ISL
Sbjct: 220 LRSRWSRPFKIKEGKPYGAVVLLNDRGEPFTVNGQRLKPYLAEIGKEESASISL 273

[Close]
BLAST of ClCG01G014550 vs. NCBI nr
Match: gi|971569120|ref|XP_015169056.1| (PREDICTED: uncharacterized protein LOC107062676 [Solanum tuberosum])

HSP 1 Score: 120.9 bits (302), Expect = 3.7e-24
Identity = 82/234 (35.04%), Postives = 118/234 (50.43%), Query Frame = 1 

Query: 23  SCWIEVVATTTNDAIVVKKFLVKHIFSIYRIPQAPISD---------------------- 82
           S W+EVVA  +N+A VV KF+ KHIF+ +  P+A ISD                      
Sbjct: 5   SKWVEVVALPSNNAKVVVKFIRKHIFTRFGTPRAMISDGEVSNKEVKQILQKTVNAQRKD 64

Query: 83  --EGLDEALWAYRIAFKALLGMNSYRIIF----------EAKYEYISSTREADATVK--- 142
             +  D+ALWAYR  +K  +  + YR++F          E K  +       DA +    
Sbjct: 65  WADKFDDALWAYRTVYKTPIETSPYRMVFGKACQLPANLEHKAYWAIKKLNLDAELAGRK 124

Query: 143 ------ELEELHFHACENAKLNKERKKMYDDQRINPSKFQATQQVSLFNSKLRLFLRKLK 202
                 ELEE   +A +NAKL K + K + D+ I    F+  Q V LFNSKL+LF RKL+
Sbjct: 125 RITQLHELEEFRLYAYKNAKLYKPKTKRWHDKHIVSRTFEPGQLVFLFNSKLKLFPRKLR 184

Query: 203 SKWSPFFEISKVYPHGAEELLDTNDDM-FKINSQGLKPYWGEVTDKEKAIISLS 213
           SKWS  FE+ ++  HGA  L + +    F +N Q +K Y+G   D E  +++L+
Sbjct: 185 SKWSDPFEVVRMTQHGAVGLKNKDKSFTFLVNGQRVKHYFGNDVDCELQVLTLN 238

The following BLAST results are available for this feature:
BLAST of ClCG01G014550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A151SCQ7_CAJCA3.4e-2434.53Retrovirus-related Pol polyprotein from transposon 412 family OS=Cajanus cajan G... [more]
A0A151R7V1_CAJCA4.4e-2433.06Retrovirus-related Pol polyprotein from transposon 412 family OS=Cajanus cajan G... [more]
A0A151T9S1_CAJCA9.9e-2433.77Retrovirus-related Pol polyprotein from transposon 412 family OS=Cajanus cajan G... [more]
A0A151RMQ1_CAJCA8.3e-2332.35Pol polyprotein OS=Cajanus cajan GN=KK1_034743 PE=4 SV=1[more]
A5B5E9_VITVI5.4e-2234.15Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025860 PE=4 SV=1[more]
BLAST of ClCG01G014550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|922463497|ref|XP_013632520.1|9.5e-2837.84PREDICTED: uncharacterized protein LOC106337984 [Brassica oleracea var. oleracea... [more]
gi|698477291|ref|XP_009785879.1|6.1e-2735.59PREDICTED: uncharacterized protein LOC104234082 [Nicotiana sylvestris][more]
gi|923838103|ref|XP_013699880.1|8.0e-2736.56PREDICTED: uncharacterized protein LOC106403610 [Brassica napus][more]
gi|727440783|ref|XP_010501857.1|1.0e-2635.04PREDICTED: uncharacterized protein LOC104779173 [Camelina sativa][more]
gi|971569120|ref|XP_015169056.1|3.7e-2435.04PREDICTED: uncharacterized protein LOC107062676 [Solanum tuberosum][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G014550.1ClCG01G014550.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG01G014550Wax gourdwcgwgoB239
ClCG01G014550Cucumber (Gy14) v1cgywcgB125
ClCG01G014550Cucurbita maxima (Rimu)cmawcgB179
ClCG01G014550Cucurbita maxima (Rimu)cmawcgB346
ClCG01G014550Cucurbita moschata (Rifu)cmowcgB170
ClCG01G014550Cucurbita moschata (Rifu)cmowcgB343
ClCG01G014550Wild cucumber (PI 183967)cpiwcgB024
ClCG01G014550Cucumber (Chinese Long) v2cuwcgB021
ClCG01G014550Melon (DHL92) v3.5.1mewcgB130
ClCG01G014550Watermelon (97103) v1wcgwmB153
ClCG01G014550Cucurbita pepo (Zucchini)cpewcgB021
ClCG01G014550Cucurbita pepo (Zucchini)cpewcgB454
ClCG01G014550Bottle gourd (USVL1VR-Ls)lsiwcgB173
ClCG01G014550Cucumber (Gy14) v2cgybwcgB020
ClCG01G014550Melon (DHL92) v3.6.1medwcgB125
ClCG01G014550Silver-seed gourdcarwcgB0479
ClCG01G014550Silver-seed gourdcarwcgB0977
ClCG01G014550Cucumber (Chinese Long) v3cucwcgB023
ClCG01G014550Watermelon (97103) v2wcgwmbB089