ClCG01G013630 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G013630
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionApocytochrome f
LocationCG_Chr01 : 26998724 .. 26999529 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATCTGAGTTTATAGCTTTAGACAAGGCTGGAGAAGAAGCAGAATGGCTTCAAAAAATTTTGGAAGATATTCCAAACTGGTCTAAGCTTGTGCCTGCAATATGTATACATAATGATAGGCAAGCAGCTATTGGAAGGGCACAAAATATTATGTATAATGGTAAGTCTCGACATATACGACAGAAATGCAATACAATTAGACAACTACTTTCAAATGAAATTATCACTATTGACTTTGTGAGATCAATTGATAATATTGCTGATCCACATACTTTAGTATTCTTTTCACGCTAGTCACATGACTAACTTTGAGATTGGATTGAAAACAAGCACACACCCCCACAGTATAACGTATGTGTTGGCGACTTTCCGTGAGATACAATAAGCTACCAATCATACTTTGGTATCCTATTCTTTCCCCAGACCTTGCAACTAAGAAAGATGATCACTTCTTAAAATATCCCATATACGTAGGCGGGAAAAGGGGAAGGGGTTAGATTTATCCCGACGGGAGTAAGAGTAATAATAATGTTTATAATGCTACAACCGCAGGTATAGCAAGCAAAATAATACGAAAAGAAAAAGGAGGATATGAAACAACCATAGTGGATGCAGCGAATGGGCGTCAAGTGGTTGATCTTATCCCTCCAAGACTAGAACTTCTTGTTTCAAAGGGCGAATCTATCAAACTTGATCAACCATTAACGAGTAATCCTAATGTGGGTGGATTTGGTCAGGGAGATGCGGAAATAAGCCTTTCATCGACATTTTCAACATTTGAGTCCCTTGTGATCTTAGCATAG

mRNA sequence

ATGGAATCTGAGTTTATAGCTTTAGACAAGGCTGGAGAAGAAGCAGAATGGCTTCAAAAAATTTTGGAAGATATTCCAAACTGGTCTAAGCTTGTGCCTGCAATATGTATACATAATGATAGGCAAGCAGCTATTGGAAGGGCACAAAATATTATGTATAATGACCTTGCAACTAAGAAAGATGATCACTTCTTAAAATATCCCATATACGTAGGCGGGAAAAGGGGAAGGGGTATAGCAAGCAAAATAATACGAAAAGAAAAAGGAGGATATGAAACAACCATAGTGGATGCAGCGAATGGGCGTCAAGTGGTTGATCTTATCCCTCCAAGACTAGAACTTCTTGTTTCAAAGGGCGAATCTATCAAACTTGATCAACCATTAACGAGTAATCCTAATGTGGGTGGATTTGGTCAGGGAGATGCGGAAATAAGCCTTTCATCGACATTTTCAACATTTGAGTCCCTTGTGATCTTAGCATAG

Coding sequence (CDS)

ATGGAATCTGAGTTTATAGCTTTAGACAAGGCTGGAGAAGAAGCAGAATGGCTTCAAAAAATTTTGGAAGATATTCCAAACTGGTCTAAGCTTGTGCCTGCAATATGTATACATAATGATAGGCAAGCAGCTATTGGAAGGGCACAAAATATTATGTATAATGACCTTGCAACTAAGAAAGATGATCACTTCTTAAAATATCCCATATACGTAGGCGGGAAAAGGGGAAGGGGTATAGCAAGCAAAATAATACGAAAAGAAAAAGGAGGATATGAAACAACCATAGTGGATGCAGCGAATGGGCGTCAAGTGGTTGATCTTATCCCTCCAAGACTAGAACTTCTTGTTTCAAAGGGCGAATCTATCAAACTTGATCAACCATTAACGAGTAATCCTAATGTGGGTGGATTTGGTCAGGGAGATGCGGAAATAAGCCTTTCATCGACATTTTCAACATTTGAGTCCCTTGTGATCTTAGCATAG

Protein sequence

MESEFIALDKAGEEAEWLQKILEDIPNWSKLVPAICIHNDRQAAIGRAQNIMYNDLATKKDDHFLKYPIYVGGKRGRGIASKIIRKEKGGYETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISLSSTFSTFESLVILA
Homology
[Close]
BLAST of ClCG01G013630 vs. Swiss-Prot
Match: CYF_CUCSA (Cytochrome f OS=Cucumis sativus GN=petA PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 3.8e-36
Identity = 83/116 (71.55%), Postives = 84/116 (72.41%), Query Frame = 1 

Query: 51  IMYNDLATKKDDHFLKYPIYVGGKRGRG--------------------IASKIIRKEKGG 110
           I+  D ATKKD HFLKYPIYVGG RGRG                    I SKIIRKEKGG
Sbjct: 165 ILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGG 224

Query: 111 YETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISL 147
           YE TIVDAANGRQVVD+IPP  ELLVS+GESIKLDQPLTSNPNVGGFGQGDAEI L
Sbjct: 225 YEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVL 280

[Close]
BLAST of ClCG01G013630 vs. Swiss-Prot
Match: CYF_MORIN (Cytochrome f OS=Morus indica GN=petA PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.1e-35
Identity = 84/130 (64.62%), Postives = 88/130 (67.69%), Query Frame = 1 

Query: 51  IMYNDLATKKDDHFLKYPIYVGGKRGRG--------------------IASKIIRKEKGG 110
           I+  D ATKKD HFLKYPIYVGG RGRG                    I SKIIRKEKGG
Sbjct: 165 ILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATSAGIVSKIIRKEKGG 224

Query: 111 YETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISLSSTF 161
           YE TIVDA++GRQVVD+IPP  ELLVS+GESIKLDQPLTSNPNVGGFGQGDAEI L    
Sbjct: 225 YEITIVDASDGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPL 284

[Close]
BLAST of ClCG01G013630 vs. Swiss-Prot
Match: CYF_VITVI (Cytochrome f OS=Vitis vinifera GN=petA PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.5e-35
Identity = 86/135 (63.70%), Postives = 89/135 (65.93%), Query Frame = 1 

Query: 51  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGG 110
           I+  D ATKKD HFLKYPIYVGG RGR                    GI SKIIRKEKGG
Sbjct: 165 ILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAAGIVSKIIRKEKGG 224

Query: 111 YETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISLSSTF 161
           YE TI DA++GRQVVD+IPP  ELLVS+GESIKLDQPLTSNPNVGGFGQGDAEI L    
Sbjct: 225 YEITIADASDGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPL 284

[Close]
BLAST of ClCG01G013630 vs. Swiss-Prot
Match: CYF_HELAN (Cytochrome f OS=Helianthus annuus GN=petA PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-34
Identity = 84/135 (62.22%), Postives = 89/135 (65.93%), Query Frame = 1 

Query: 51  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGG 110
           I+  D ATKKD HFLKYPIYVGG RGR                    GI SKI+RKEKGG
Sbjct: 165 ILSPDPATKKDIHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATASGIVSKILRKEKGG 224

Query: 111 YETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISLSSTF 161
           YE TI DA++GRQVVD+IPP  ELLVS+GESIKLDQPLTSNPNVGGFGQGDAEI L    
Sbjct: 225 YEITIADASDGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPL 284

[Close]
BLAST of ClCG01G013630 vs. Swiss-Prot
Match: CYF_NICSY (Cytochrome f OS=Nicotiana sylvestris GN=petA PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.6e-34
Identity = 82/130 (63.08%), Postives = 85/130 (65.38%), Query Frame = 1 

Query: 51  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGG 110
           I+  D ATKKD HFLKYPIYVGG RGR                    GI SKIIRKEKGG
Sbjct: 165 ILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAAGIVSKIIRKEKGG 224

Query: 111 YETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISLSSTF 161
           YE TI DA++GRQVVD+IPP  ELLVS+GESIK DQPLTSNPNVGGFGQGDAEI L    
Sbjct: 225 YEITITDASDGRQVVDIIPPGPELLVSEGESIKFDQPLTSNPNVGGFGQGDAEIVLQDPL 284

[Close]
BLAST of ClCG01G013630 vs. TrEMBL
Match: G3ETZ8_CUCME (Cytochrome f OS=Cucumis melo subsp. melo GN=petA PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.3e-34
Identity = 83/116 (71.55%), Postives = 86/116 (74.14%), Query Frame = 1 

Query: 51  IMYNDLATKKDDHFLKYPIYVGGKRGRG--------------------IASKIIRKEKGG 110
           I+  D ATKKD HFLKYPIYVGG RGRG                    I SKIIRKEKGG
Sbjct: 165 ILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGG 224

Query: 111 YETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISL 147
           YE TIVDAANGRQVVD+IPP  ELLVS+GESIKLDQPLTSNPNVGGFGQGDAEI L
Sbjct: 225 YEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVL 280

[Close]
BLAST of ClCG01G013630 vs. TrEMBL
Match: W8E203_9ROSI (Cytochrome f OS=Cucumis hystrix GN=petA PE=3 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 4.3e-34
Identity = 83/116 (71.55%), Postives = 86/116 (74.14%), Query Frame = 1 

Query: 51  IMYNDLATKKDDHFLKYPIYVGGKRGRG--------------------IASKIIRKEKGG 110
           I+  D ATKKD HFLKYPIYVGG RGRG                    I SKIIRKEKGG
Sbjct: 165 ILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGG 224

Query: 111 YETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISL 147
           YE TIVDAANGRQVVD+IPP  ELLVS+GESIKLDQPLTSNPNVGGFGQGDAEI L
Sbjct: 225 YEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVL 280

[Close]
BLAST of ClCG01G013630 vs. TrEMBL
Match: E5KUA9_CORLA (Cytochrome f OS=Corynocarpus laevigatus GN=petA PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 5.6e-34
Identity = 85/130 (65.38%), Postives = 90/130 (69.23%), Query Frame = 1 

Query: 51  IMYNDLATKKDDHFLKYPIYVGGKRGRG--------------------IASKIIRKEKGG 110
           I+  D ATKKD HFLKYPIYVGG RGRG                    I SKIIRKEKGG
Sbjct: 165 ILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGG 224

Query: 111 YETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISLSSTF 161
           YE TIVDA++GRQVVD+IPP  ELLVS+GESIKLDQPLTSNPNVGGFGQGDAEI L    
Sbjct: 225 YEITIVDASDGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPL 284

[Close]
BLAST of ClCG01G013630 vs. TrEMBL
Match: A0A0N9XN90_9ROSA (Cytochrome f OS=Ficus racemosa GN=petA PE=3 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-33
Identity = 84/130 (64.62%), Postives = 90/130 (69.23%), Query Frame = 1 

Query: 51  IMYNDLATKKDDHFLKYPIYVGGKRGRG--------------------IASKIIRKEKGG 110
           I+  D ATKKD HFLKYPIYVGG RGRG                    I SKIIRKEKGG
Sbjct: 187 ILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGG 246

Query: 111 YETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISLSSTF 161
           YE TIVDA++GRQVVD+IPP  ELLVS+GESIKLDQPLTSNPNVGGFGQGDAEI L    
Sbjct: 247 YEITIVDASDGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPL 306

[Close]
BLAST of ClCG01G013630 vs. TrEMBL
Match: A0A159YMX1_MORAL (Cytochrome f OS=Morus alba var. multicaulis GN=petA PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-33
Identity = 84/130 (64.62%), Postives = 90/130 (69.23%), Query Frame = 1 

Query: 51  IMYNDLATKKDDHFLKYPIYVGGKRGRG--------------------IASKIIRKEKGG 110
           I+  D ATKKD HFLKYPIYVGG RGRG                    I SKIIRKEKGG
Sbjct: 165 ILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATSAGIVSKIIRKEKGG 224

Query: 111 YETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISLSSTF 161
           YE TIVDA++GRQVVD+IPP  ELLVS+GESIKLDQPLTSNPNVGGFGQGDAEI L    
Sbjct: 225 YEITIVDASDGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPL 284

[Close]
BLAST of ClCG01G013630 vs. TAIR10
Match: ATCG00540.1 (ATCG00540.1 photosynthetic electron transfer A)

HSP 1 Score: 146.0 bits (367), Expect = 2.0e-35
Identity = 78/116 (67.24%), Postives = 83/116 (71.55%), Query Frame = 1 

Query: 51  IMYNDLATKKDDHFLKYPIYVGGKRGRG--------------------IASKIIRKEKGG 110
           I+  D AT KD HFLKYPIYVGG RGRG                    I SKI+RKEKGG
Sbjct: 165 ILAPDPATNKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAGGIISKILRKEKGG 224

Query: 111 YETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISL 147
           YE TIVDA+NGR+V+D+IP  LELLVS+GESIKLDQPLTSNPNVGGFGQGDAEI L
Sbjct: 225 YEITIVDASNGREVIDIIPRGLELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVL 280

[Close]
BLAST of ClCG01G013630 vs. NCBI nr
Match: gi|346578204|ref|YP_004841796.1| (cytochrome f [Cucumis melo subsp. melo])

HSP 1 Score: 152.5 bits (384), Expect = 6.1e-34
Identity = 83/116 (71.55%), Postives = 86/116 (74.14%), Query Frame = 1 

Query: 51  IMYNDLATKKDDHFLKYPIYVGGKRGRG--------------------IASKIIRKEKGG 110
           I+  D ATKKD HFLKYPIYVGG RGRG                    I SKIIRKEKGG
Sbjct: 165 ILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGG 224

Query: 111 YETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISL 147
           YE TIVDAANGRQVVD+IPP  ELLVS+GESIKLDQPLTSNPNVGGFGQGDAEI L
Sbjct: 225 YEITIVDAANGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVL 280

[Close]
BLAST of ClCG01G013630 vs. NCBI nr
Match: gi|317046186|ref|YP_004072475.1| (cytochrome f [Corynocarpus laevigata])

HSP 1 Score: 152.1 bits (383), Expect = 8.0e-34
Identity = 85/130 (65.38%), Postives = 90/130 (69.23%), Query Frame = 1 

Query: 51  IMYNDLATKKDDHFLKYPIYVGGKRGRG--------------------IASKIIRKEKGG 110
           I+  D ATKKD HFLKYPIYVGG RGRG                    I SKIIRKEKGG
Sbjct: 165 ILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGG 224

Query: 111 YETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISLSSTF 161
           YE TIVDA++GRQVVD+IPP  ELLVS+GESIKLDQPLTSNPNVGGFGQGDAEI L    
Sbjct: 225 YEITIVDASDGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPL 284

[Close]
BLAST of ClCG01G013630 vs. NCBI nr
Match: gi|944542092|ref|YP_009176018.1| (cytochrome f (chloroplast) [Ficus racemosa])

HSP 1 Score: 151.0 bits (380), Expect = 1.8e-33
Identity = 84/130 (64.62%), Postives = 90/130 (69.23%), Query Frame = 1 

Query: 51  IMYNDLATKKDDHFLKYPIYVGGKRGRG--------------------IASKIIRKEKGG 110
           I+  D ATKKD HFLKYPIYVGG RGRG                    I SKIIRKEKGG
Sbjct: 187 ILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATAAGIVSKIIRKEKGG 246

Query: 111 YETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISLSSTF 161
           YE TIVDA++GRQVVD+IPP  ELLVS+GESIKLDQPLTSNPNVGGFGQGDAEI L    
Sbjct: 247 YEITIVDASDGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPL 306

[Close]
BLAST of ClCG01G013630 vs. NCBI nr
Match: gi|114804276|ref|YP_762274.1| (cytochrome f [Morus indica])

HSP 1 Score: 151.0 bits (380), Expect = 1.8e-33
Identity = 84/130 (64.62%), Postives = 90/130 (69.23%), Query Frame = 1 

Query: 51  IMYNDLATKKDDHFLKYPIYVGGKRGRG--------------------IASKIIRKEKGG 110
           I+  D ATKKD HFLKYPIYVGG RGRG                    I SKIIRKEKGG
Sbjct: 165 ILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNNVYNATSAGIVSKIIRKEKGG 224

Query: 111 YETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISLSSTF 161
           YE TIVDA++GRQVVD+IPP  ELLVS+GESIKLDQPLTSNPNVGGFGQGDAEI L    
Sbjct: 225 YEITIVDASDGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPL 284

[Close]
BLAST of ClCG01G013630 vs. NCBI nr
Match: gi|669100194|ref|YP_009048123.1| (cytochrome f (chloroplast) [Primula poissonii])

HSP 1 Score: 150.2 bits (378), Expect = 3.0e-33
Identity = 84/130 (64.62%), Postives = 89/130 (68.46%), Query Frame = 1 

Query: 51  IMYNDLATKKDDHFLKYPIYVGGKRGR--------------------GIASKIIRKEKGG 110
           I+  D ATKKD HFLKYPIYVGG RGR                    GI SKIIRKEKGG
Sbjct: 165 ILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGNKSNNTVYNATTTGIVSKIIRKEKGG 224

Query: 111 YETTIVDAANGRQVVDLIPPRLELLVSKGESIKLDQPLTSNPNVGGFGQGDAEISLSSTF 161
           YE TI DA++GRQVVD+IPP  ELLVS+GESIKLDQPLTSNPNVGGFGQGDAEI L    
Sbjct: 225 YEITIADASDGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPL 284

The following BLAST results are available for this feature:
BLAST of ClCG01G013630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CYF_CUCSA3.8e-3671.55Cytochrome f OS=Cucumis sativus GN=petA PE=3 SV=1[more]
CYF_MORIN1.1e-3564.62Cytochrome f OS=Morus indica GN=petA PE=3 SV=1[more]
CYF_VITVI5.5e-3563.70Cytochrome f OS=Vitis vinifera GN=petA PE=3 SV=1[more]
CYF_HELAN1.2e-3462.22Cytochrome f OS=Helianthus annuus GN=petA PE=3 SV=1[more]
CYF_NICSY1.6e-3463.08Cytochrome f OS=Nicotiana sylvestris GN=petA PE=3 SV=1[more]
BLAST of ClCG01G013630 vs. TrEMBL
Match NameE-valueIdentityDescription
G3ETZ8_CUCME4.3e-3471.55Cytochrome f OS=Cucumis melo subsp. melo GN=petA PE=3 SV=1[more]
W8E203_9ROSI4.3e-3471.55Cytochrome f OS=Cucumis hystrix GN=petA PE=3 SV=1[more]
E5KUA9_CORLA5.6e-3465.38Cytochrome f OS=Corynocarpus laevigatus GN=petA PE=3 SV=1[more]
A0A0N9XN90_9ROSA1.2e-3364.62Cytochrome f OS=Ficus racemosa GN=petA PE=3 SV=1[more]
A0A159YMX1_MORAL1.2e-3364.62Cytochrome f OS=Morus alba var. multicaulis GN=petA PE=4 SV=1[more]
BLAST of ClCG01G013630 vs. TAIR10
Match NameE-valueIdentityDescription
ATCG00540.12.0e-3567.24ATCG00540.1 photosynthetic electron transfer A[more]
BLAST of ClCG01G013630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|346578204|ref|YP_004841796.1|6.1e-3471.55cytochrome f [Cucumis melo subsp. melo][more]
gi|317046186|ref|YP_004072475.1|8.0e-3465.38cytochrome f [Corynocarpus laevigata][more]
gi|944542092|ref|YP_009176018.1|1.8e-3364.62cytochrome f (chloroplast) [Ficus racemosa][more]
gi|114804276|ref|YP_762274.1|1.8e-3364.62cytochrome f [Morus indica][more]
gi|669100194|ref|YP_009048123.1|3.0e-3364.62cytochrome f (chloroplast) [Primula poissonii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002325Cyt_f
IPR011054Rudment_hybrid_motif
IPR024094Cyt_f_lg_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005506iron ion binding
GO:0009055electron carrier activity
GO:0020037heme binding
Vocabulary: Biological Process
TermDefinition
GO:0015979photosynthesis
Vocabulary: Cellular Component
TermDefinition
GO:0031361integral component of thylakoid membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015979 photosynthesis
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031361 integral component of thylakoid membrane
molecular_function GO:0009055 electron carrier activity
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G013630.1ClCG01G013630.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002325Cytochrome fPFAMPF01333Apocytochr_F_Ccoord: 78..149
score: 8.1
IPR002325Cytochrome fPROFILEPS51010CYTFcoord: 51..160
score: 21
IPR011054Rudiment single hybrid motifunknownSSF51246Rudiment single hybrid motifcoord: 77..131
score: 1.29
IPR024094Cytochrome f large domainGENE3DG3DSA:2.60.40.830coord: 130..148
score: 1.2E-14coord: 54..83
score: 1.2
IPR024094Cytochrome f large domainunknownSSF49441Cytochrome f, large domaincoord: 51..88
score: 1.96E-11coord: 131..148
score: 1.96
NoneNo IPR availableGENE3DG3DSA:2.40.50.100coord: 84..129
score: 4.0
NoneNo IPR availablePANTHERPTHR33288FAMILY NOT NAMEDcoord: 51..146
score: 2.3
NoneNo IPR availablePANTHERPTHR33288:SF3APOCYTOCHROME Fcoord: 51..146
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG01G013630Cucumber (Gy14) v2cgybwcgB014
ClCG01G013630Melon (DHL92) v3.6.1medwcgB127
ClCG01G013630Silver-seed gourdcarwcgB0160
ClCG01G013630Silver-seed gourdcarwcgB0477
ClCG01G013630Cucumber (Chinese Long) v3cucwcgB016
ClCG01G013630Watermelon (97103) v2wcgwmbB089
ClCG01G013630Wax gourdwcgwgoB243
ClCG01G013630Cucumber (Gy14) v1cgywcgB382
ClCG01G013630Cucurbita maxima (Rimu)cmawcgB154
ClCG01G013630Cucurbita maxima (Rimu)cmawcgB181
ClCG01G013630Cucurbita maxima (Rimu)cmawcgB343
ClCG01G013630Cucurbita moschata (Rifu)cmowcgB142
ClCG01G013630Cucurbita moschata (Rifu)cmowcgB172
ClCG01G013630Cucurbita moschata (Rifu)cmowcgB341
ClCG01G013630Wild cucumber (PI 183967)cpiwcgB017
ClCG01G013630Cucumber (Chinese Long) v2cuwcgB014
ClCG01G013630Melon (DHL92) v3.5.1mewcgB131
ClCG01G013630Watermelon (97103) v1wcgwmB156
ClCG01G013630Cucurbita pepo (Zucchini)cpewcgB026
ClCG01G013630Cucurbita pepo (Zucchini)cpewcgB455
ClCG01G013630Cucurbita pepo (Zucchini)cpewcgB727
ClCG01G013630Bottle gourd (USVL1VR-Ls)lsiwcgB230