ClCG01G013480 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G013480
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionSerine/arginine repetitive matrix protein 1
LocationCG_Chr01 : 26669432 .. 26670364 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCATCAAGAAAATGTTTCTCATTAAAACCCTATTTACATTAGGGTTTGGAAACTCACATCTTCATAAGATCCGCCATCGCCTCTCCATATCCATTCCTTTGAGTTCGCCGTGGCCGGAAGCATTAACCAGTTGTATCGTTGGTCGTTTGCCGTTGGTTCCTAAAGGATCATCAACCGCCGCCGCCACCGGTTCGTGGTCTCATCTGTCCGCCGCGCCTCTGCAAATCCATTCGTCGCCTCCTCGATCTCGATCATTCCGCCACTGCGTCGTGCAGACCCGTCCGCCGCCGCATTGTGTAGATCCGTACCCGGCGCCACGTCGTGCAGATCCGTCCCGCAACTGCATCGTGCAGATCCGTCCTCGCTACCGCGTCGAGCAGACCCATGAATCACCGCATCGCGCAGATTCGTCCCCGGCACCACGTCGTGCAGATCCACGACCATCGCATCACGTAGATCAGTCCCCGTCGCAGCGTCGAGCAGATCCACGAACACCGCATCGCGCAGATCCGTCCCTGGCGCCGCGTCGAGCAGATCCACGAACACCGCATCGCATAGATCCGTCCCCGCCGCCGCGTCAAGCAGATCCACGAACATCGCATAGCGCAGATCTGTCCCTGGCGCCGCGTCGAGCAGATCCACGAACCGCATTGCGTAGATCCTTCCCCGCCGCTGGGTCGAGCAGATCCACGAACCGCCGCCGCATCGTGCAAGAACTTCTGCCGCCGCATCGTGCAGGTCTGTTCGCTGCCGCATCGTGCAAGTCAGTTCGCCGCTGCCTCGTGCAAATCCTTCCGCCACCGCCTCTGCATATCCTTTCTCGCCGCCGCCGGTTCGTGGTAGTTTTTGGGTTGACCGGTTCGTGGTTCGTTGTAGCAACTTTGCACCGCCGGTTCGTGGTAGTTTTTGGGTTTGCTAGTTCTTGGTAG

mRNA sequence

ATGCCCATCAAGAAAATGTTTCTCATTAAAACCCTATTTACATTAGGGTTTGGAAACTCACATCTTCATAAGATCCGCCATCGCCTCTCCATATCCATTCCTTTGAGTTCGCCGTGGCCGGAAGCATTAACCAGTTGTATCGTTGGTCGTTTGCCGTTGGTTCCTAAAGGATCATCAACCGCCGCCGCCACCGGTTCGTGGTCTCATCTGTCCGCCGCGCCTCTGCAAATCCATTCGTCGCCTCCTCGATCTCGATCATTCCGCCACTGCGTCGTGCAGACCCGTCCGCCGCCGCATTGTGTAGATCCGTACCCGGCGCCACGTCGTGCAGATCCGTCCCGCAACTGCATCGTGCAGATCCGTCCTCGCTACCGCGTCGAGCAGACCCATGAATCACCGCATCGCGCAGATTCGTCCCCGGCACCACGTCGTGCAGATCCACGACCATCGCATCACGTAGATCAGTCCCCGTCGCAGCGTCGAGCAGATCCACGAACACCGCATCGCGCAGATCCGTCCCTGGCGCCGCGTCGAGCAGATCCACGAACACCGCATCGCATAGATCCGTCCCCGCCGCCGCGTCAAGCAGATCCACGAACATCGCATAGCGCAGATCTGTCCCTGGCGCCGCGTCGAGCAGATCCACGAACCGCATTGCGTAGATCCTTCCCCGCCGCTGGGTCGAGCAGATCCACGAACCGCCGCCGCATCGTGCAAGAACTTCTGCCGCCGCATCGTGCAGGTCTGTTCGCTGCCGCATCGTGCAAGTCAGTTCGCCGCTGCCTCGTGCAAATCCTTCCGCCACCGCCTCTGCATATCCTTTCTCGCCGCCGCCGGTTCGTGGTAGTTTTTGGGTTGACCGGTTCGTGGTTCGTTGTAGCAACTTTGCACCGCCGGTTCGTGGTAGTTTTTGGGTTTGCTAGTTCTTGGTAG

Coding sequence (CDS)

ATGCCCATCAAGAAAATGTTTCTCATTAAAACCCTATTTACATTAGGGTTTGGAAACTCACATCTTCATAAGATCCGCCATCGCCTCTCCATATCCATTCCTTTGAGTTCGCCGTGGCCGGAAGCATTAACCAGTTGTATCGTTGGTCGTTTGCCGTTGGTTCCTAAAGGATCATCAACCGCCGCCGCCACCGGTTCGTGGTCTCATCTGTCCGCCGCGCCTCTGCAAATCCATTCGTCGCCTCCTCGATCTCGATCATTCCGCCACTGCGTCGTGCAGACCCGTCCGCCGCCGCATTGTGTAGATCCGTACCCGGCGCCACGTCGTGCAGATCCGTCCCGCAACTGCATCGTGCAGATCCGTCCTCGCTACCGCGTCGAGCAGACCCATGAATCACCGCATCGCGCAGATTCGTCCCCGGCACCACGTCGTGCAGATCCACGACCATCGCATCACGTAGATCAGTCCCCGTCGCAGCGTCGAGCAGATCCACGAACACCGCATCGCGCAGATCCGTCCCTGGCGCCGCGTCGAGCAGATCCACGAACACCGCATCGCATAGATCCGTCCCCGCCGCCGCGTCAAGCAGATCCACGAACATCGCATAGCGCAGATCTGTCCCTGGCGCCGCGTCGAGCAGATCCACGAACCGCATTGCGTAGATCCTTCCCCGCCGCTGGGTCGAGCAGATCCACGAACCGCCGCCGCATCGTGCAAGAACTTCTGCCGCCGCATCGTGCAGGTCTGTTCGCTGCCGCATCGTGCAAGTCAGTTCGCCGCTGCCTCGTGCAAATCCTTCCGCCACCGCCTCTGCATATCCTTTCTCGCCGCCGCCGGTTCGTGGTAGTTTTTGGGTTGACCGGTTCGTGGTTCGTTGTAGCAACTTTGCACCGCCGGTTCGTGGTAGTTTTTGGGTTTGCTAGTTCTTGGTAG

Protein sequence

MPIKKMFLIKTLFTLGFGNSHLHKIRHRLSISIPLSSPWPEALTSCIVGRLPLVPKGSSTAAATGSWSHLSAAPLQIHSSPPRSRSFRHCVVQTRPPPHCVDPYPAPRRADPSRNCIVQIRPRYRVEQTHESPHRADSSPAPRRADPRPSHHVDQSPSQRRADPRTPHRADPSLAPRRADPRTPHRIDPSPPPRQADPRTSHSADLSLAPRRADPRTALRRSFPAAGSSRSTNRRRIVQELLPPHRAGLFAAASCKSVRRCLVQILPPPPLHILSRRRRFVVVFGLTGSWFVVATLHRRFVVVFGFASSW
Homology
[Close]
BLAST of ClCG01G013480 vs. Swiss-Prot
Match: YM012_HUMAN (Uncharacterized protein DKFZp434B061 OS=Homo sapiens PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 4.7e-06
Identity = 73/230 (31.74%), Postives = 87/230 (37.83%), Query Frame = 1 

Query: 55  PKGS-STAAATGSWSHLSAAPLQIHSSPPRSRSFRHCVVQTRPPPHCV---DPYPAPRRA 114
           P G+ STA+ TG+ S  SA+P     +PPR+         T  PP       P  A    
Sbjct: 115 PTGTPSTASPTGTPS--SASPT---GTPPRASP-------TGTPPRAWATRSPSTASLTR 174

Query: 115 DPSRNCIVQIRPRYRVEQT--HESP---HRADSSPAPRRADPRPSHHVDQSPSQRRADPR 174
            PSR  + +  PR    +T   ESP   HRA  +  P RA P            RR    
Sbjct: 175 TPSRASLTRWPPRASPTRTPPRESPRMSHRASPTRTPPRASPT-----------RRPPRA 234

Query: 175 TP------------HRADPSLAPRRADP-RTPHRIDPSPPPRQADPRTSHSADLSLAPRR 234
           +P            HRA P+  P RA P R P R  P+  P +A P T         P R
Sbjct: 235 SPTRTPPRESLRTSHRASPTRMPPRASPTRRPPRASPTGSPPRASPMT---------PPR 294

Query: 235 ADPRTALRRSFPAAGSSRS--TNRRRIVQELLPPHRAGLFAAASCKSVRR 261
           A PRT  R S P    SR+  T           P RA L    S  S+ R
Sbjct: 295 ASPRTPPRAS-PTTTPSRASLTRTPSWASPTTTPSRASLMKMESTVSITR 311


HSP 2 Score: 45.1 bits (105), Expect = 1.7e-03
Identity = 48/142 (33.80%), Postives = 60/142 (42.25%), Query Frame = 1 

Query: 103 PYPAPRRADPSRNCIVQIRPRYRVEQTHESPHRAD----SSPAPRRADPRPSHHVDQSPS 162
           P  A     PSR    ++  R  ++ T   P RA      S A  R  PR S  + ++P+
Sbjct: 4   PSTASLTRTPSRASPTRMPSRASLKMT---PFRASLTKMESTALLRTLPRAS--LMRTPT 63

Query: 163 QRRADPRTPHRADPSLAPRRADPRTPHRIDPSPPPRQADPRTS-HSADLSLAPRRAD--- 222
            R +  RTP RA P+  P RA PRTP R  P+    +A P  S H A     P RA    
Sbjct: 64  -RASLMRTPPRASPTRKPPRASPRTPSRASPTRRLPRASPMGSPHRASPMRTPPRASPTG 123

Query: 223 -PRTALRRSFPAAGSSRSTNRR 236
            P TA     P++ S   T  R
Sbjct: 124 TPSTASPTGTPSSASPTGTPPR 139

[Close]
BLAST of ClCG01G013480 vs. TrEMBL
Match: A0A0A0LTA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G172590 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.7e-07
Identity = 35/109 (32.11%), Postives = 51/109 (46.79%), Query Frame = 1 

Query: 96  PPPHCVDPYPAPRRADPSRNCIVQIRPRYRVEQTHESPHRADSSPAPRRADPRPSHHVDQ 155
           PPP   DP P P++ DP  +           ++    P +    P P++ADP P    D 
Sbjct: 86  PPPKPADP-PPPKKVDPPPS-----------KKPDPPPPQKVDPPPPKKADPPPPKKADT 145

Query: 156 SPSQRRADPRTPHRADPSLAPRRADPRTPHRIDP------SPPPRQADP 199
            P  + ADP  P +A     P++ADP  P ++DP       PPP++ DP
Sbjct: 146 PPPSKAADPPPPQKAADPPPPKKADPPPPKKVDPPPPKANPPPPKKVDP 182

[Close]
BLAST of ClCG01G013480 vs. TrEMBL
Match: A0A0A0LTA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G172590 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 3.8e-02
Identity = 26/76 (34.21%), Postives = 35/76 (46.05%), Query Frame = 1 

Query: 140 PAPRRADPRPSHHVDQSPSQRRADPRTPHRADPSLAPRRADPRTPHRIDPSPPPRQADPR 199
           P P+ ADP P   VD  PS++   P           P++ DP  P + DP PP +   P 
Sbjct: 86  PPPKPADPPPPKKVDPPPSKKPDPP----------PPQKVDPPPPKKADPPPPKKADTPP 145

Query: 200 TSHSADLSLAPRRADP 216
            S +AD     + ADP
Sbjct: 146 PSKAADPPPPQKAADP 151


HSP 2 Score: 64.3 bits (155), Expect = 3.0e-07
Identity = 53/160 (33.12%), Postives = 68/160 (42.50%), Query Frame = 1 

Query: 96  PPPHCVDPYPAPRRADPSRNCIVQIRPRYRVEQTHESPHRADSSPAPRRADPRPSHHVDQ 155
           P P      P PRR+ P    +    PR R +    SP R   SP  RR D  P  H + 
Sbjct: 155 PSPRRKPLSPPPRRSPPPNRRVSS--PRRRPDS---SPRRRVESPVRRRVDSSPHRHGET 214

Query: 156 SPSQRRADP---RTP-----HRADPSLAPRRADPRTPHRIDPSPPPRQADPRTSHSADLS 215
            P +R A P   R+P     HR+   ++PRR       +  P PP R++ PR   S    
Sbjct: 215 PPRRRAASPPRRRSPSPARRHRSPARISPRRGRGSPVRKRSPIPPRRRSPPRRPRSPPRR 274

Query: 216 LAPRRADPRTALRRSFPAAGSSRSTNRRRIVQELLPPHRA 248
             P R   R+ +RR  P    SRS + RR      PP RA
Sbjct: 275 SPPPRRRSRSPIRR--PLHSRSRSVSPRR--GRGPPPRRA 305

[Close]
BLAST of ClCG01G013480 vs. TrEMBL
Match: U6LU92_9EIME (Uncharacterized protein OS=Eimeria brunetti GN=EBH_0041370 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.6e-06
Identity = 37/79 (46.84%), Postives = 45/79 (56.96%), Query Frame = 1 

Query: 135 RADSSPAPRRADPRPSHHVDQSPSQRRADPRTPHRADPSLAPR---RADPRTPHRIDPSP 194
           RAD +   R ADP P   +D   +  R DPR   R DP+L P+   RADPRT   +DP  
Sbjct: 276 RADPTTDQRAADPTPDPTLDPR-ADPRTDPRADPRTDPTLDPKGDPRADPRTDPTLDPRG 335

Query: 195 PPRQADPRTSHSADLSLAP 211
            PR ADPRT  +AD +L P
Sbjct: 336 DPR-ADPRTDPTADPTLDP 352

[Close]
BLAST of ClCG01G013480 vs. TrEMBL
Match: U6LU92_9EIME (Uncharacterized protein OS=Eimeria brunetti GN=EBH_0041370 PE=4 SV=1)

HSP 1 Score: 40.8 bits (94), Expect = 3.5e+00
Identity = 41/142 (28.87%), Postives = 59/142 (41.55%), Query Frame = 1 

Query: 102 DPYPAPRRADPSRNCIVQIRPRYRVEQTHESPHRADSSPAPR---RADPRPSHHVDQSPS 161
           DP    R ADP+ +  +  R   R +   +   R D +  P+   RADPR    +D    
Sbjct: 278 DPTTDQRAADPTPDPTLDPRADPRTDPRADP--RTDPTLDPKGDPRADPRTDPTLDPR-G 337

Query: 162 QRRADPRTPHRADPSLAPRRADPRTPHRIDPSPPPRQADPRTSHSADLSLA----PRRAD 221
             RADPRT   ADP+L P       P   +   PP Q     +  A L+ A    PR+  
Sbjct: 338 DPRADPRTDPTADPTLDPEDDPQGDPE--EEGGPPFQLYVHPTPPAALAFAGIVDPRQLP 397

Query: 222 PRTALRRSFPAAGSSRSTNRRR 237
           P  A   +  A G  +   +++
Sbjct: 398 PAAAAAVAAAAIGQQQQQQQQQ 414


HSP 2 Score: 59.7 bits (143), Expect = 7.3e-06
Identity = 54/193 (27.98%), Postives = 64/193 (33.16%), Query Frame = 1 

Query: 74  PLQIHSSPPR----SRSFRHCVVQTRPPPHCVDPYPAPRRADPSRNCIVQIRPRYRVEQT 133
           P +    PPR     R  R      RPP    D  P  R  D         RP  R    
Sbjct: 229 PRRFEDRPPRRFDDERPPRKFSDDQRPPRRFDDERPPRRFEDRPPRRFDDERPPRRFNDD 288

Query: 134 HESPHRADSSPAPRRADPRPSHHVD----------QSPSQRRADPRTPHRADPSLAPRR- 193
              P R+D    PRR + RP    D          Q   +R  D R P R D    PRR 
Sbjct: 289 QRPPRRSDDERPPRRFEDRPPRRFDDERPRRYGDDQRAQRRDGDQRPPRRFDDERPPRRF 348

Query: 194 ----------ADPRTPHRIDPSPPPRQADPRTSHSADLSLAPRRADPRTALRRSFPAAGS 242
                      D R P R D   PPR+ + R   +     APRR +      R  P A  
Sbjct: 349 DDEQRPPRRYGDDRAPRRFDNDHPPRRFEDRPQRAEREERAPRRTEQEAP--RQTPQADE 408

[Close]
BLAST of ClCG01G013480 vs. NCBI nr
Match: gi|823474521|ref|XP_012433178.1| (PREDICTED: vegetative cell wall protein gp1-like [Taeniopygia guttata])

HSP 1 Score: 69.3 bits (168), Expect = 1.3e-08
Identity = 55/154 (35.71%), Postives = 73/154 (47.40%), Query Frame = 1 

Query: 93  QTRPPPHCVDPYPAPRRADPSRNCIVQIRPRYRVEQ-THESPHRADSSPAPRRADPRPSH 152
           +T P PH   P P+P R +P            R E   H+SP R +  P P R+ P PS 
Sbjct: 9   RTEPGPHRALPAPSPARTEP------------RTEPGPHQSPARTE--PGPHRSRPAPS- 68

Query: 153 HVDQSPSQRRADPRT---PHRADPSLAPRRADPRT---PHRIDPSPPPRQADP---RTSH 212
               +PS  R +PRT   PHRA P+  P R +PRT   PHR   +P P + +P   R  H
Sbjct: 69  ---PAPSPVRTEPRTEPGPHRARPAPIPARTEPRTDPGPHRALLAPSPARTEPGPHRAPH 128

Query: 213 SADLSLAPRRADPRTALRRSFPAAGSSRSTNRRR 237
                 AP RA P  +     P+ G  R+++R R
Sbjct: 129 R-----APHRARPAPS---PAPSPGPHRASHRAR 136

[Close]
BLAST of ClCG01G013480 vs. NCBI nr
Match: gi|823474521|ref|XP_012433178.1| (PREDICTED: vegetative cell wall protein gp1-like [Taeniopygia guttata])

HSP 1 Score: 59.3 bits (142), Expect = 1.4e-05
Identity = 47/136 (34.56%), Postives = 59/136 (43.38%), Query Frame = 1 

Query: 78  HSSPPRSRSFRHCVVQTRPPPHCVDPYPAPRRADPSRNCIVQIRPRYRVEQTHESPHRAD 137
           H SP R+    H   ++RP P    P P+P R +P               +T   PHRA 
Sbjct: 35  HQSPARTEPGPH---RSRPAP---SPAPSPVRTEP---------------RTEPGPHRAR 94

Query: 138 SSPAPRRADPRPS---HHVDQSPSQRRADPRTPHRADPSLAPRRADPRTPHRIDPSPPPR 197
            +P P R +PR     H    +PS  R +P  PHRA P  AP RA P       PSP P 
Sbjct: 95  PAPIPARTEPRTDPGPHRALLAPSPARTEP-GPHRA-PHRAPHRARPA------PSPAPS 141

Query: 198 QADPRTSHSADLSLAP 211
               R SH A  + +P
Sbjct: 155 PGPHRASHRARPARSP 141


HSP 2 Score: 69.3 bits (168), Expect = 1.3e-08
Identity = 64/200 (32.00%), Postives = 81/200 (40.50%), Query Frame = 1 

Query: 79  SSPPRSRSFRHCVVQTRPPPHCVDPYPAPRRADPSRNCIVQIRPRYRVEQTHESPHRADS 138
           S  P+S +  + +  T P PH            P+ + ++ + P       H +PHRA  
Sbjct: 459 SYTPQSTASSYTLQSTAPIPH------------PTEHSLI-LHPTEH--SPHPTPHRAQP 518

Query: 139 SPAPRRADPRPSHHVDQS-PSQRRADPR-TPHRADPSLAPRRADPR-TPHRIDPSPPPRQ 198
            P P RA P P+ H  +S P+  RA P  TPHR+ P L P RA P  TPHR    P P  
Sbjct: 519 HPTPHRARPHPTPHRTRSHPTPHRARPHPTPHRSRPHLTPHRAQPHPTPHRAQSHPTPHG 578

Query: 199 ADPRTSHSADLSLAPRRADPRTALRRSFPAAGSSRSTNRRRIVQELLPPHRAGLFAAASC 258
           A P  SH+   S AP       A R S P  G           + L+P            
Sbjct: 579 ARPE-SHT-PWSTAPIPHPTEAAGRVSLPNLGD----------RTLVP------------ 609

Query: 259 KSVRRCLVQILPPPPLHILS 276
                     LPPPP H LS
Sbjct: 639 ----------LPPPPGHTLS 609

[Close]
BLAST of ClCG01G013480 vs. NCBI nr
Match: gi|635069367|ref|XP_008003472.1| (PREDICTED: flocculation protein FLO11-like [Chlorocebus sabaeus])

HSP 1 Score: 62.4 bits (150), Expect = 1.6e-06
Identity = 54/169 (31.95%), Postives = 68/169 (40.24%), Query Frame = 1 

Query: 59  STAAATGSWSHLSAAPLQIHSSPPRSRSFRHCVV------QTRPPPHCVDPYPAPRRADP 118
           STA++    S  S+  LQ  S+ P      H ++         P PH   P+P P RA P
Sbjct: 455 STASSYTPQSTASSYTLQ--STAPIPHPTEHSLILHPTEHSPHPTPHRAQPHPTPHRARP 514

Query: 119 SRNCIVQIRPRYRVEQTHESPHRADSSPAPRRADPRPSHHVDQSP-SQRRADPR-TPHRA 178
                            H +PHR  S P P RA P P+ H  +   +  RA P  TPHRA
Sbjct: 515 -----------------HPTPHRTRSHPTPHRARPHPTPHRSRPHLTPHRAQPHPTPHRA 574

Query: 179 DPSLAPRRADP--RTPHRIDPSPPPRQADPRTS--HSADLSLAPRRADP 216
                P  A P   TP    P P P +A  R S  +  D +L P    P
Sbjct: 575 QSHPTPHGARPESHTPWSTAPIPHPTEAAGRVSLPNLGDRTLVPLPPPP 604


HSP 2 Score: 58.2 bits (139), Expect = 3.1e-05
Identity = 63/246 (25.61%), Postives = 91/246 (36.99%), Query Frame = 1 

Query: 34  PLSSPWPEALTSCIVGRLPLVPKGSSTAAATGSWSHLSAAPLQIHSSPPRSRSFRHCVVQ 93
           PLS+       S +    P     S T  +T + SH   +    ++ P  + S+   +  
Sbjct: 372 PLSTASSYTPQSTVSSHTPQSTVSSHTPQSTAT-SHTPQSTASSYTPPSTASSYTPQITA 431

Query: 94  TRPPPHCVDPYPAPRRADPSRNCIVQIRPRYRVEQTHESPHRADSSPAPRRADPRPSHHV 153
           +   P        P+ +  S          Y  + T  S     ++P P   +    H +
Sbjct: 432 SSHTPQSTASSYTPQ-STASSYTPQSTASSYTPQSTASSYTLQSTAPIPHPTE----HSL 491

Query: 154 DQSPSQRRADPRTPHRADPSLAPRRADPR-TPHRIDPSPPPRQADPR-TSHSADLSLAPR 213
              P++    P TPHRA P   P RA P  TPHR    P P +A P  T H +   L P 
Sbjct: 492 ILHPTEHSPHP-TPHRAQPHPTPHRARPHPTPHRTRSHPTPHRARPHPTPHRSRPHLTPH 551

Query: 214 RADPRTALRR--SFPAAGSSRSTNRRRIVQELLPPHRAGLFAAASCKSVRRCLVQILPPP 273
           RA P     R  S P    +R  +        + PH        S  ++    +  LPPP
Sbjct: 552 RAQPHPTPHRAQSHPTPHGARPESHTPWSTAPI-PHPTEAAGRVSLPNLGDRTLVPLPPP 609

Query: 274 PLHILS 276
           P H LS
Sbjct: 612 PGHTLS 609


HSP 3 Score: 68.2 bits (165), Expect = 2.9e-08
Identity = 43/126 (34.13%), Postives = 60/126 (47.62%), Query Frame = 1 

Query: 81  PPRSRSFRHCVVQTRPPPHCVDPYPAPRRADPSRNCIVQIRPRYRVEQTHESPHRADSSP 140
           PP+    +H      PPP  VDP P P++ DP         P  +V+     P +AD  P
Sbjct: 82  PPKPPPPKHA--DPPPPPKKVDP-PPPKKPDPP--------PPQKVDPP--PPKKADPPP 141

Query: 141 APRRADPRPSHHVDQSPSQRRADPRTPHRADPSLAPRRADPRTPHRID--------PSPP 199
            P++ADP P    D  P  + ADP  P +A     P++ADP  P ++D        P PP
Sbjct: 142 -PKKADPPPPKKPDPPPPSKAADPPPPQKAADPPPPKKADPAPPKKVDPPPAKAEPPPPP 193

[Close]
BLAST of ClCG01G013480 vs. NCBI nr
Match: gi|659128604|ref|XP_008464282.1| (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo])

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-07
Identity = 34/83 (40.96%), Postives = 44/83 (53.01%), Query Frame = 1 

Query: 133 PHRADSSPAPRRADPRPSHHVDQSPSQRRADPRTPHRADPSLAPRRADPRTPHRIDPSPP 192
           P  AD  P P++ DP P    D  P Q+  DP  P +ADP   P++ADP  P + DP PP
Sbjct: 88  PKHADPPPPPKKVDPPPPKKPDPPPPQK-VDPPPPKKADPP-PPKKADPPPPKKPDPPPP 147

Query: 193 PRQADPRTSHSADLSLAPRRADP 216
            + ADP     A     P++ADP
Sbjct: 148 SKAADPPPPQKAADPPPPKKADP 168


HSP 2 Score: 53.9 bits (128), Expect = 5.8e-04
Identity = 27/74 (36.49%), Postives = 36/74 (48.65%), Query Frame = 1 

Query: 142 PRRADPRPSHHVDQSPSQRRADPRTPHRADPSLAPRRADPRTPHRIDPSPPPRQADPRTS 201
           P    P P  H D  P  ++ DP  P + DP   P++ DP  P + DP PPP++ADP   
Sbjct: 80  PEPPKPPPPKHADPPPPPKKVDPPPPKKPDPP-PPQKVDPPPPKKADP-PPPKKADPPPP 139

Query: 202 HSADLSLAPRRADP 216
              D     + ADP
Sbjct: 140 KKPDPPPPSKAADP 151


HSP 3 Score: 49.7 bits (117), Expect = 1.1e-02
Identity = 31/100 (31.00%), Postives = 43/100 (43.00%), Query Frame = 1 

Query: 96  PPPHCVDPYPAPRRADPSRNCIVQIRPRYRVEQTHESPHRADSSPAPRRADPRPSHHVDQ 155
           PPP   DP P P++ADP         P  +       P +A   P P++ADP P   VD 
Sbjct: 119 PPPKKADP-PPPKKADPPPPKKPDPPPPSKAADP-PPPQKAADPPPPKKADPAPPKKVDP 178

Query: 156 SPSQRRADPRTPHRADPS--LAPRRADPRTPHRIDPSPPP 194
            P++    P  P + DP   + P+      P  + P P P
Sbjct: 179 PPAKAEPPPPPPKKVDPPPVVVPQPNPVPIPVPVQPEPYP 216


HSP 4 Score: 47.4 bits (111), Expect = 5.4e-02
Identity = 35/129 (27.13%), Postives = 51/129 (39.53%), Query Frame = 1 

Query: 142 PRRADPRPSHHVDQSPSQRRADPRTPHRADPSLAPRRADPRTPHRIDPSPPPRQADPRTS 201
           P    P P  H D  P  ++ DP           P++ DP  P ++DP PPP++ADP   
Sbjct: 80  PEPPKPPPPKHADPPPPPKKVDPPP---------PKKPDPPPPQKVDP-PPPKKADPP-- 139

Query: 202 HSADLSLAPRRADPRTALRRSFPAAGSSRSTNRRRIVQELLPPHRAGLFAAASCKSVRRC 261
                   P++ADP    +   P    +      +   +  PP +A     A  K V   
Sbjct: 140 -------PPKKADPPPPKKPDPPPPSKAADPPPPQKAADPPPPKKAD---PAPPKKVDPP 186

Query: 262 LVQILPPPP 271
             +  PPPP
Sbjct: 200 PAKAEPPPP 186


HSP 5 Score: 65.1 bits (157), Expect = 2.5e-07
Identity = 35/109 (32.11%), Postives = 51/109 (46.79%), Query Frame = 1 

Query: 96  PPPHCVDPYPAPRRADPSRNCIVQIRPRYRVEQTHESPHRADSSPAPRRADPRPSHHVDQ 155
           PPP   DP P P++ DP  +           ++    P +    P P++ADP P    D 
Sbjct: 86  PPPKPADP-PPPKKVDPPPS-----------KKPDPPPPQKVDPPPPKKADPPPPKKADT 145

Query: 156 SPSQRRADPRTPHRADPSLAPRRADPRTPHRIDP------SPPPRQADP 199
            P  + ADP  P +A     P++ADP  P ++DP       PPP++ DP
Sbjct: 146 PPPSKAADPPPPQKAADPPPPKKADPPPPKKVDPPPPKANPPPPKKVDP 182

[Close]
BLAST of ClCG01G013480 vs. NCBI nr
Match: gi|449443496|ref|XP_004139513.1| (PREDICTED: basic proline-rich protein-like [Cucumis sativus])

HSP 1 Score: 47.4 bits (111), Expect = 5.4e-02
Identity = 26/76 (34.21%), Postives = 35/76 (46.05%), Query Frame = 1 

Query: 140 PAPRRADPRPSHHVDQSPSQRRADPRTPHRADPSLAPRRADPRTPHRIDPSPPPRQADPR 199
           P P+ ADP P   VD  PS++   P           P++ DP  P + DP PP +   P 
Sbjct: 86  PPPKPADPPPPKKVDPPPSKKPDPP----------PPQKVDPPPPKKADPPPPKKADTPP 145

Query: 200 TSHSADLSLAPRRADP 216
            S +AD     + ADP
Sbjct: 146 PSKAADPPPPQKAADP 151


HSP 2 Score: 64.3 bits (155), Expect = 4.3e-07
Identity = 53/160 (33.12%), Postives = 68/160 (42.50%), Query Frame = 1 

Query: 96  PPPHCVDPYPAPRRADPSRNCIVQIRPRYRVEQTHESPHRADSSPAPRRADPRPSHHVDQ 155
           P P      P PRR+ P    +    PR R +    SP R   SP  RR D  P  H + 
Sbjct: 217 PSPRRKPLSPPPRRSPPPNRRVSS--PRRRPDS---SPRRRVESPVRRRVDSSPHRHGET 276

Query: 156 SPSQRRADP---RTP-----HRADPSLAPRRADPRTPHRIDPSPPPRQADPRTSHSADLS 215
            P +R A P   R+P     HR+   ++PRR       +  P PP R++ PR   S    
Sbjct: 277 PPRRRAASPPRRRSPSPARRHRSPARISPRRGRGSPVRKRSPIPPRRRSPPRRPRSPPRR 336

Query: 216 LAPRRADPRTALRRSFPAAGSSRSTNRRRIVQELLPPHRA 248
             P R   R+ +RR  P    SRS + RR      PP RA
Sbjct: 337 SPPPRRRSRSPIRR--PLHSRSRSVSPRR--GRGPPPRRA 367

The following BLAST results are available for this feature:
BLAST of ClCG01G013480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YM012_HUMAN4.7e-0631.74Uncharacterized protein DKFZp434B061 OS=Homo sapiens PE=2 SV=2[more]
BLAST of ClCG01G013480 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTA1_CUCSA1.7e-0732.11Uncharacterized protein OS=Cucumis sativus GN=Csa_1G172590 PE=4 SV=1[more]
A0A0A0LTA1_CUCSA3.8e-0234.21Uncharacterized protein OS=Cucumis sativus GN=Csa_1G172590 PE=4 SV=1[more]
U6LU92_9EIME5.6e-0646.84Uncharacterized protein OS=Eimeria brunetti GN=EBH_0041370 PE=4 SV=1[more]
U6LU92_9EIME3.5e+0028.87Uncharacterized protein OS=Eimeria brunetti GN=EBH_0041370 PE=4 SV=1[more]
BLAST of ClCG01G013480 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|823474521|ref|XP_012433178.1|1.3e-0835.71PREDICTED: vegetative cell wall protein gp1-like [Taeniopygia guttata][more]
gi|823474521|ref|XP_012433178.1|1.4e-0534.56PREDICTED: vegetative cell wall protein gp1-like [Taeniopygia guttata][more]
gi|635069367|ref|XP_008003472.1|1.6e-0631.95PREDICTED: flocculation protein FLO11-like [Chlorocebus sabaeus][more]
gi|659128604|ref|XP_008464282.1|1.1e-0740.96PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo][more]
gi|449443496|ref|XP_004139513.1|5.4e-0234.21PREDICTED: basic proline-rich protein-like [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G013480.1ClCG01G013480.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG01G013480Cucumber (Chinese Long) v2cuwcgB013
ClCG01G013480Melon (DHL92) v3.5.1mewcgB139
ClCG01G013480Watermelon (97103) v1wcgwmB156
ClCG01G013480Cucurbita pepo (Zucchini)cpewcgB026
ClCG01G013480Cucurbita pepo (Zucchini)cpewcgB452
ClCG01G013480Cucumber (Gy14) v2cgybwcgB012
ClCG01G013480Melon (DHL92) v3.6.1medwcgB134
ClCG01G013480Silver-seed gourdcarwcgB0477
ClCG01G013480Silver-seed gourdcarwcgB0978
ClCG01G013480Cucumber (Chinese Long) v3cucwcgB014
ClCG01G013480Watermelon (97103) v2wcgwmbB089
ClCG01G013480Wax gourdwcgwgoB231
ClCG01G013480Cucumber (Gy14) v1cgywcgB124
ClCG01G013480Cucurbita maxima (Rimu)cmawcgB187
ClCG01G013480Cucurbita maxima (Rimu)cmawcgB343
ClCG01G013480Cucurbita moschata (Rifu)cmowcgB178
ClCG01G013480Cucurbita moschata (Rifu)cmowcgB341
ClCG01G013480Wild cucumber (PI 183967)cpiwcgB015