ClCG01G012330 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G012330
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionTy3-gypsy retrotransposon protein
LocationCG_Chr01 : 22648721 .. 22651958 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGGAAATAGAGACGAAGGCCTTAGAGGTAGCTGAGAATGTCGAGTTAGCGCTGAGGTCCGTGTATGGATTTTCCGCACCAAGGACCATGAAGTTGAAGGGGGTGGTAAGGGGAAAAGAAGTGGTGGTACTCATCGACTATGGAGCCACCCACAACTTCATACACCAACATTTGGCGGAGGAGTTGAAATTGCAAGTGGCAGAAACGTCCAATTATTTGATTGTGGTTGGGAATGGTACGACCATAAAAGGGCAGGGCATTTGTCGGTCAATATTACTGATGTTACAAGAGATTACTATTATGGAAGATTTCCTACCGTTGGATTTAGGCAAAATGGACATCATACTAGGCATTGCATGGTTGTGCGCCACGGGATTCATGAGGATACATTGGCCGTCATTAACGATGACCTTCGCATCAAAGGGATTCACAAGTGACTTTGAAGGGTGATCCCTCCCTAACTAGGGCCGAGATTATATATATCGAGCTTATTGGATTTATGGAATATATGTATCTAGCTACTTGGATATATAGTATTTTCATATCGAGTTTCTTGGATATTGTGTACTAATTCTGATGCTGAAGGAATATTACAAAGGCATCAATGGACAGATTGTGGTCCCCAAAGCTGAAGGAGGTGGAGAAGGCATATGGGCAGCCTGAATATATTTTCCAATGCTGAAGTACTGGGAGAAGGCGTTGATGATGATGGTCGTGGCAAAGACCAGGATTCGTTACCGCACAGGATGGTCAGAGGGTCGGAAGGATCTAGTTTCTGAGCCTGTAGTGAAGATTTTCTCGTGGGATGGTCAGAGGGTCACCAAAACCTAGTTCCTGAGCCTATGAAAAGTACCCGAGGGGATGGTCAGGGGGCCGACAGGTCTAGTTCCTAAGTCTCGAAGGTAAGACTATGTGCACTGATAACTTGTAGAAATACAAGTTATGATAGCCTTTTTCTTAGAGAAATAGAGATTAAATAGAGAAGCATGCGGTAGTTTATGCTAAATTCTATTAATAAATCTTCCTTTGTGTTCTACTCTTGTATTTTTATGAAGATAATGATTTTACCACTTTTTGAGCCTAAAACGCATGTTTTAACGTAGGAATGCGAACGATGTGTTGACGACTTCTTAACGCAGGACAATGCGTTAGCAATCTGTTCATCATGGACGCATGATCTGAACGAAACGCGAACAACCTGAAGATGCGTTAACAACTATTCAACGCAAGACTATGCGTTAGCAACCTATGACGCGTTGACATCAATCCAACTCCCCATGAATGCATAATGACCAAAGACGCAAGGCGCGGAGAATCAAATCAGAATCTTGAGAGATTGTCGGAAGATTGACAAACATGATCTGTGGCTAAAGTGGTGGATCTAAATTGACCCGAGAATTACGCAATTAGGCGAGATGGACGCATGATATCAATCTCGCCGCCAATCAAGCAGATTTGCCATTGATTGCGAACATATTTCACAAGTTTTTAGCGTCATTGCCGGAGACTTGAGATCTGTGTATTCACAACAAGTTTTTGGCGCTGTTGCTGGGGATTATTGCATTGATTTAATTATTTTATTTGGATTATTGTGTTGTAGGATTCCTCAGTTGAAGGAGTATAGTAAGTTTCTCCTCTGCTAGAAGCTTCTAACAGTATCTGAGTGACGGGAGCAATCCATAACTCAATATTGACCCAGAGATTGAGAGAACCTTCACCTGAAGGACAAGGTAGAATTGAAGAGGGACCAATAGTAGCGTGGACCTAATTCACACACGGCTAGTGAGGAATTGCCTGCGTAAGCAGGAGGATTATTGGATATGACTTACTCATATGCCGAAGATATTTTCGATAGAACTTCATGGAACACTAATGAGTGGGTGGACGACGGATATGAATTTCGCTCCACCAATAGAAGGCAAACGCAAGCTGGAATACTTGAAGCTGATGCTGCCACCAATCTCTCAGCTCAGATCGCCGAAATGACATCTCTGCTGGAGACGATAGTCTTGAATAATCAAGGTAGATCAGTTGCTGCGATGAACGCAGTGCACACGATGAACCCGACAGCATCTGCAAACTGCCCGCAGTGTGGTGCGGGGAACTTGTACGACATGTCTCCCTACAACCTCTAGTCTATCTGCAGTATTCAAAACAACCCCTACGGTGAGACGTACAATTCGGGTTGGAAGAACCACCTCGACTTCGGATGGGGTGGAAATCAACAACAAACGCAAAGGGCTAAGCAGCAGCCGCAGAAAAGCAACCTTCTGATTTCAACCAATGGAATCAAGGCTAGTATCATCAGTATTCGAGGGATCCGCAAGCAGACGCATCATCCTCATTGTCTTCCATGGAATCTCTTTTACAAGAATATAGCAGTGAGATTGAAGCAACGCGCCAGTCGTACGAAGCGATGATCCAAAGCCAAAGAGAAGAAATTAAAAGCCAAGCCACTGCAATTCGCAATATAGAAGTTCTAATGAATCAAATTGCAGAGGAGCTCAACAATGAAACACAAGGAGCATTGTTAAATACGACCGAAGTTCCAAGAGGGAACTTAGAAGAACAATGTCAAGATGAGACATTGTTAAGTGGGAAAATTAATCCCACAGCGCAAAACGAGGGGACACAAGGAAACTTGCAGCCCCTAAATGCTCCCACAAGTCAACAGATGGAGAGTACCACGCATAATGTCCATCATCCATCATCTTCCACCGAACAAGAAGAGAAAAATTTAGAGCAGAGAGAAAAAGCAACGCAGGCAGAACCTGTGTCTGTATATGAAGATACCACTTCTGGACGCGTCCTGATTGACGTCCAAGAAGAAATCTCAACGCCCCGCGTGGGTGATCAGGTAAAATTTAATGTAGTTAACGCGTTGAACGATCCTGATCATTCCCAATCTTGTCAGATGAACGCGGATATTAATGAAAAGACAAGACCTATGAACGCGGCGTTGAGAGATGAAATCCTCAAGGACGGTGAAGATGGTGAAGAAGATGAAATCAAATTACTCTCCGATCGTATAATTGAGCAAGTAGACCGGAACAACAGATCCGCGGCAAAGATCGAGCTGTTATTAGAAGAGCCTTCAACGCACGAGCTACAAACCAGACCAACGCATCCCAAGTACGTCCACTTGAGGGAGGTCATAATGCACTTCATTGTCTCCTCTGCGTTGAACCCTGAACGCGATAAAGGCTCTAACGATCTACGCAAGCGTAATAACTGA

mRNA sequence

ATGCCGGAAATAGAGACGAAGGCCTTAGAGGTAGCTGAGAATGTCGAGTTAGCGCTGAGGTCCGTGTATGGATTTTCCGCACCAAGGACCATGAAGTTGAAGGGGGTGGTAAGGGGAAAAGAAGTGGTGGTACTCATCGACTATGGAGCCACCCACAACTTCATACACCAACATTTGGCGGAGGAGTTGAAATTGCAAGTGGCAGAAACGTCCAATTATTTGATTGTGGTTGGGAATGGTACGACCATAAAAGGGCAGGGCATTTGTCGGTCAATATTACTGATGTTACAAGAGATTACTATTATGGAAGATTTCCTACCGTTGGATTTAGGCAAAATGGACATCATACTAGGCATTGCATGGTTGTGCGCCACGGGATTCATGAGGATACATTGGCCGTCATTAACGATGACCTTCGCATCAAAGGGATTCACAAGTGACTTTGAAGGGAATATTACAAAGGCATCAATGGACAGATTGTGGTCCCCAAAGCTGAAGGAGTACTGGGAGAAGGCGTTGATGATGATGGTCGTGGCAAAGACCAGGATTCGTTACCGCACAGGATGGTCAGAGGGTCGGAAGGATCTAGTTTCTGAGCCTGTAGTGAAGATTTTCTCGTGGGATGTACCCGAGGGGATGGTCAGGGGGCCGACAGGTCTAGTTCCTAAGTCTCGAAGCAGATTTGCCATTGATTGCGAACATATTTCACAAGTTTTTAGCGTCATTGCCGGAGACTTGAGATCTGTGTATTCACAACAAGTTTTTGGCGCTGTTGCTGGGGATTATTGCATTGATTTAATTATTTTATTTGGATTATTGTGTTGTAGGATTCCTCAGTTGAAGGAGTATACAGGAGGATTATTGGATATGACTTACTCATATGCCGAAGATATTTTCGATAGAACTTCATGGAACACTAATGAGTGGGTGGACGACGGATATGAATTTCGCTCCACCAATAGAAGGCAAACGCAAGCTGGAATACTTGAAGCTGATGCTGCCACCAATCTCTCAGCTCAGATCGCCGAAATGACATCTCTGCTGGAGACGATAGTCTTGAATAATCAAGGTAGATCAGTTGCTGCGATGAACGCAGTGCACACGATGAACCCGACAGCATCTGCAAACTGCCCGCAGTGTGGTGCGGGGAACTTTATTCAAAACAACCCCTACGGTGAGACGTACAATTCGGGTTGGAAGAACCACCTCGACTTCGGATGGGGTGGAAATCAACAACAAACGCAAAGGGCTAAGCAGCAGCCGCAGAAAAGCAACCTTCTGATTTCAACCAATGGAATCAAGGCTACAGACGCATCATCCTCATTGTCTTCCATGGAATCTCTTTTACAAGAATATAGCAGTGAGATTGAAGCAACGCGCCAGTCGTACGAAGCGATGATCCAAAGCCAAAGAGAAGAAATTAAAAGCCAAGCCACTGCAATTCGCAATATAGAAGTTCTAATGAATCAAATTGCAGAGGAGCTCAACAATGAAACACAAGGAGCATTGTTAAATACGACCGAAGTTCCAAGAGGGAACTTAGAAGAACAATGTCAAGATGAGACATTGTTAAGTGGGAAAATTAATCCCACAGCGCAAAACGAGGGGACACAAGGAAACTTGCAGCCCCTAAATGCTCCCACAAGTCAACAGATGGAGAGTACCACGCATAATGTCCATCATCCATCATCTTCCACCGAACAAGAAGAGAAAAATTTAGAGCAGAGAGAAAAAGCAACGCAGGCAGAACCTGTGTCTGTATATGAAGATACCACTTCTGGACGCGTCCTGATTGACGTCCAAGAAGAAATCTCAACGCCCCGCGTGGGTGATCAGGTAAAATTTAATGTAGTTAACGCGTTGAACGATCCTGATCATTCCCAATCTTGTCAGATGAACGCGGATATTAATGAAAAGACAAGACCTATGAACGCGGCGTTGAGAGATGAAATCCTCAAGGACGGTGAAGATGGTGAAGAAGATGAAATCAAATTACTCTCCGATCGTATAATTGAGCAAGTAGACCGGAACAACAGATCCGCGGCAAAGATCGAGCTGTTATTAGAAGAGCCTTCAACGCACGAGCTACAAACCAGACCAACGCATCCCAAGTACGTCCACTTGAGGGAGGTCATAATGCACTTCATTGTCTCCTCTGCGTTGAACCCTGAACGCGATAAAGGCTCTAACGATCTACGCAAGCGTAATAACTGA

Coding sequence (CDS)

ATGCCGGAAATAGAGACGAAGGCCTTAGAGGTAGCTGAGAATGTCGAGTTAGCGCTGAGGTCCGTGTATGGATTTTCCGCACCAAGGACCATGAAGTTGAAGGGGGTGGTAAGGGGAAAAGAAGTGGTGGTACTCATCGACTATGGAGCCACCCACAACTTCATACACCAACATTTGGCGGAGGAGTTGAAATTGCAAGTGGCAGAAACGTCCAATTATTTGATTGTGGTTGGGAATGGTACGACCATAAAAGGGCAGGGCATTTGTCGGTCAATATTACTGATGTTACAAGAGATTACTATTATGGAAGATTTCCTACCGTTGGATTTAGGCAAAATGGACATCATACTAGGCATTGCATGGTTGTGCGCCACGGGATTCATGAGGATACATTGGCCGTCATTAACGATGACCTTCGCATCAAAGGGATTCACAAGTGACTTTGAAGGGAATATTACAAAGGCATCAATGGACAGATTGTGGTCCCCAAAGCTGAAGGAGTACTGGGAGAAGGCGTTGATGATGATGGTCGTGGCAAAGACCAGGATTCGTTACCGCACAGGATGGTCAGAGGGTCGGAAGGATCTAGTTTCTGAGCCTGTAGTGAAGATTTTCTCGTGGGATGTACCCGAGGGGATGGTCAGGGGGCCGACAGGTCTAGTTCCTAAGTCTCGAAGCAGATTTGCCATTGATTGCGAACATATTTCACAAGTTTTTAGCGTCATTGCCGGAGACTTGAGATCTGTGTATTCACAACAAGTTTTTGGCGCTGTTGCTGGGGATTATTGCATTGATTTAATTATTTTATTTGGATTATTGTGTTGTAGGATTCCTCAGTTGAAGGAGTATACAGGAGGATTATTGGATATGACTTACTCATATGCCGAAGATATTTTCGATAGAACTTCATGGAACACTAATGAGTGGGTGGACGACGGATATGAATTTCGCTCCACCAATAGAAGGCAAACGCAAGCTGGAATACTTGAAGCTGATGCTGCCACCAATCTCTCAGCTCAGATCGCCGAAATGACATCTCTGCTGGAGACGATAGTCTTGAATAATCAAGGTAGATCAGTTGCTGCGATGAACGCAGTGCACACGATGAACCCGACAGCATCTGCAAACTGCCCGCAGTGTGGTGCGGGGAACTTTATTCAAAACAACCCCTACGGTGAGACGTACAATTCGGGTTGGAAGAACCACCTCGACTTCGGATGGGGTGGAAATCAACAACAAACGCAAAGGGCTAAGCAGCAGCCGCAGAAAAGCAACCTTCTGATTTCAACCAATGGAATCAAGGCTACAGACGCATCATCCTCATTGTCTTCCATGGAATCTCTTTTACAAGAATATAGCAGTGAGATTGAAGCAACGCGCCAGTCGTACGAAGCGATGATCCAAAGCCAAAGAGAAGAAATTAAAAGCCAAGCCACTGCAATTCGCAATATAGAAGTTCTAATGAATCAAATTGCAGAGGAGCTCAACAATGAAACACAAGGAGCATTGTTAAATACGACCGAAGTTCCAAGAGGGAACTTAGAAGAACAATGTCAAGATGAGACATTGTTAAGTGGGAAAATTAATCCCACAGCGCAAAACGAGGGGACACAAGGAAACTTGCAGCCCCTAAATGCTCCCACAAGTCAACAGATGGAGAGTACCACGCATAATGTCCATCATCCATCATCTTCCACCGAACAAGAAGAGAAAAATTTAGAGCAGAGAGAAAAAGCAACGCAGGCAGAACCTGTGTCTGTATATGAAGATACCACTTCTGGACGCGTCCTGATTGACGTCCAAGAAGAAATCTCAACGCCCCGCGTGGGTGATCAGGTAAAATTTAATGTAGTTAACGCGTTGAACGATCCTGATCATTCCCAATCTTGTCAGATGAACGCGGATATTAATGAAAAGACAAGACCTATGAACGCGGCGTTGAGAGATGAAATCCTCAAGGACGGTGAAGATGGTGAAGAAGATGAAATCAAATTACTCTCCGATCGTATAATTGAGCAAGTAGACCGGAACAACAGATCCGCGGCAAAGATCGAGCTGTTATTAGAAGAGCCTTCAACGCACGAGCTACAAACCAGACCAACGCATCCCAAGTACGTCCACTTGAGGGAGGTCATAATGCACTTCATTGTCTCCTCTGCGTTGAACCCTGAACGCGATAAAGGCTCTAACGATCTACGCAAGCGTAATAACTGA

Protein sequence

MPEIETKALEVAENVELALRSVYGFSAPRTMKLKGVVRGKEVVVLIDYGATHNFIHQHLAEELKLQVAETSNYLIVVGNGTTIKGQGICRSILLMLQEITIMEDFLPLDLGKMDIILGIAWLCATGFMRIHWPSLTMTFASKGFTSDFEGNITKASMDRLWSPKLKEYWEKALMMMVVAKTRIRYRTGWSEGRKDLVSEPVVKIFSWDVPEGMVRGPTGLVPKSRSRFAIDCEHISQVFSVIAGDLRSVYSQQVFGAVAGDYCIDLIILFGLLCCRIPQLKEYTGGLLDMTYSYAEDIFDRTSWNTNEWVDDGYEFRSTNRRQTQAGILEADAATNLSAQIAEMTSLLETIVLNNQGRSVAAMNAVHTMNPTASANCPQCGAGNFIQNNPYGETYNSGWKNHLDFGWGGNQQQTQRAKQQPQKSNLLISTNGIKATDASSSLSSMESLLQEYSSEIEATRQSYEAMIQSQREEIKSQATAIRNIEVLMNQIAEELNNETQGALLNTTEVPRGNLEEQCQDETLLSGKINPTAQNEGTQGNLQPLNAPTSQQMESTTHNVHHPSSSTEQEEKNLEQREKATQAEPVSVYEDTTSGRVLIDVQEEISTPRVGDQVKFNVVNALNDPDHSQSCQMNADINEKTRPMNAALRDEILKDGEDGEEDEIKLLSDRIIEQVDRNNRSAAKIELLLEEPSTHELQTRPTHPKYVHLREVIMHFIVSSALNPERDKGSNDLRKRNN
Homology
[Close]
BLAST of ClCG01G012330 vs. TrEMBL
Match: A5B2I6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043911 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.3e-29
Identity = 60/133 (45.11%), Postives = 95/133 (71.43%), Query Frame = 1 

Query: 5    ETKALEVAENVELALRSVYGFSAPRTMKLKGVVRGKEVVVLIDYGATHNFIHQHLAEELK 64
            E   +E+ + VEL+L SV G + P TMK+KG +  KEV++L+D GATHNF+   L ++L 
Sbjct: 1033 EPALIELKDAVELSLNSVVGLTTPGTMKIKGTIGSKEVIILVDSGATHNFLSLELVQQLT 1092

Query: 65   LQVAETSNYLIVVGNGTTIKGQGICRSILLMLQEITIMEDFLPLDLGKMDIILGIAWLCA 124
            L +  T++Y +++G G ++KG+GICR + + +Q +T++EDFLPL+LG  D+ILG+ WL  
Sbjct: 1093 LPLTTTTSYGVMMGTGISVKGKGICRGVCISMQGLTVVEDFLPLELGNTDVILGMPWLGT 1152

Query: 125  TGFMRIHWPSLTM 138
             G ++++W  LTM
Sbjct: 1153 LGDVKVNWKMLTM 1165

[Close]
BLAST of ClCG01G012330 vs. TrEMBL
Match: A0A087GEK8_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G499800 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.3e-29
Identity = 65/141 (46.10%), Postives = 96/141 (68.09%), Query Frame = 1 

Query: 11  VAENVELALRSVYGFSAPRTMKLKGVVRGKEVVVLIDYGATHNFIHQHLAEELKLQVAET 70
           + E  EL+L S+ G S+P TMKL G ++  EVVVLID GA+HNF+ + L   L LQ A+T
Sbjct: 393 ITELAELSLNSMVGISSPSTMKLMGTIQTTEVVVLIDSGASHNFVSEQLVHRLGLQSAKT 452

Query: 71  SNYLIVVGNGTTIKGQGICRSILLMLQEITIMEDFLPLDLGKMDIILGIAWLCATGFMRI 130
            +Y ++ G G T++G G+CR ++L+LQ + I +DFLPL+LG  D+ILGI WL + G M++
Sbjct: 453 GSYGVLTGGGMTVRGAGVCRGLVLLLQGLRIRDDFLPLELGSADVILGIKWLSSLGEMKV 512

Query: 131 HWPSLTMTFASKGFTSDFEGN 152
           +W    M F+  G T+  +G+
Sbjct: 513 NWGRQYMRFSLGGETAVLQGD 533

[Close]
BLAST of ClCG01G012330 vs. TrEMBL
Match: E5GC18_CUCME (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 3.8e-29
Identity = 64/149 (42.95%), Postives = 100/149 (67.11%), Query Frame = 1 

Query: 9   LEVAENVELALRSVYGFSAPRTMKLKGVVRGKEVVVLIDYGATHNFIHQHLAEELKLQVA 68
           +E+   VEL+L SV G +AP T K+KG V  +EVVV+ID GATHNFI   L EE+++   
Sbjct: 348 VEIGPIVELSLSSVVGLTAPGTSKIKGKVEDREVVVMIDCGATHNFISLRLVEEMQIATT 407

Query: 69  ETSNYLIVVGNGTTIKGQGICRSILLMLQEITIMEDFLPLDLGKMDIILGIAWLCATGFM 128
           ET+ Y +++G+G  ++G+G+C  +++ L  +T++EDFLPL+LG +D++LG+ WL   G M
Sbjct: 408 ETTQYGVIMGSGKAVQGKGMCTGVVVGLPGLTVVEDFLPLELGHLDMVLGMQWLPKQGAM 467

Query: 129 RIHWPSLTMTFASKGFTSDFEGNITKASM 158
            + W +L MTFA +       G+++   M
Sbjct: 468 TVDWRNLAMTFAVRDVKVMLRGDLSLTRM 496

[Close]
BLAST of ClCG01G012330 vs. TrEMBL
Match: F6GVT4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0083g00660 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 8.6e-29
Identity = 60/133 (45.11%), Postives = 95/133 (71.43%), Query Frame = 1 

Query: 5   ETKALEVAENVELALRSVYGFSAPRTMKLKGVVRGKEVVVLIDYGATHNFIHQHLAEELK 64
           E   +E+ + VEL+L SV G + P TMK+KG +R KEV++L+D GATHNF+   L ++L 
Sbjct: 25  EPALIELKDVVELSLNSVVGLTTPGTMKIKGTIRSKEVIILVDSGATHNFLSLELVQQLA 84

Query: 65  LQVAETSNYLIVVGNGTTIKGQGICRSILLMLQEITIMEDFLPLDLGKMDIILGIAWLCA 124
           L +   ++Y +++G G ++KG+GICR + + +Q +T++EDFLPL+LG  D+ILG+ WL  
Sbjct: 85  LPLTTITSYGVMMGIGISMKGKGICRGVCISMQGLTVVEDFLPLELGNTDVILGMPWLGT 144

Query: 125 TGFMRIHWPSLTM 138
            G ++++W  LTM
Sbjct: 145 LGDVKVNWKMLTM 157

[Close]
BLAST of ClCG01G012330 vs. TrEMBL
Match: A0A087GAS3_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G317800 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.6e-27
Identity = 65/156 (41.67%), Postives = 101/156 (64.74%), Query Frame = 1 

Query: 10  EVAENVELALRSVYGFSAPRTMKLKGVVRGKEVVVLIDYGATHNFIHQHLAEELKLQVAE 69
           E+A    L+L S+ G S+PRT+K++GV++G+ VVVLID GATHNFI + +   L+L+  E
Sbjct: 370 EIAGMATLSLNSMVGISSPRTVKIRGVIQGEHVVVLIDSGATHNFISEKIVTLLRLRTEE 429

Query: 70  TSNYLIVVGNGTTIKGQGICRSILLMLQEITIMEDFLPLDLGKMDIILGIAWLCATGFMR 129
           T  Y +V G G T++GQGIC+++ L LQ + ++  FLPL+LG  D+ILG+ WL + G M 
Sbjct: 430 TKGYGVVTGTGLTVQGQGICKAVELSLQGLLVVAHFLPLELGSADVILGMQWLESVGDMV 489

Query: 130 IHWPSLTMTFASKGFTSDFEGN----ITKASMDRLW 162
            +W    ++F  +G   + +G+     +  +M  LW
Sbjct: 490 CNWKLQKLSFKVEGRRVELQGDPCICCSPVTMKGLW 525

[Close]
BLAST of ClCG01G012330 vs. TAIR10
Match: AT3G29750.1 (AT3G29750.1 Eukaryotic aspartyl protease family protein)

HSP 1 Score: 78.2 bits (191), Expect = 2.4e-14
Identity = 48/142 (33.80%), Postives = 74/142 (52.11%), Query Frame = 1 

Query: 1   MPEIETKALEVAENVELALRSVYGFSAPRTMKLKGVVRGKEVVVLIDYGATHNFIHQHLA 60
           + E+E  +  + + +E   + V   +  + M+  G +   +VVV ID GAT NFI   LA
Sbjct: 97  LEELEQDSYTLRQGME---QLVIDLTRNKGMRFYGFILDHKVVVAIDSGATDNFILVELA 156

Query: 61  EELKLQVAETSNYLIVVGNGTTIKGQGICRSILLMLQEITIMEDFLPLDLGK--MDIILG 120
             LKL  + T+   +++G    I+  G C  I L +QE+ I E+FL LDL K  +D+ILG
Sbjct: 157 FSLKLPTSITNQASVLLGQRQCIQSVGTCLGIRLWVQEVEITENFLLLDLAKTDVDVILG 216

Query: 121 IAWLCATGFMRIHWPSLTMTFA 141
             WL   G   ++W +   +F+
Sbjct: 217 YEWLSKLGETMVNWQNQDFSFS 235

[Close]
BLAST of ClCG01G012330 vs. TAIR10
Match: AT3G30770.1 (AT3G30770.1 Eukaryotic aspartyl protease family protein)

HSP 1 Score: 68.2 bits (165), Expect = 2.5e-11
Identity = 41/101 (40.59%), Postives = 59/101 (58.42%), Query Frame = 1 

Query: 20  RSVYGFSAPRTMKLKGVVRGKEVVVLIDYGATHNFIHQHLAEELKLQVAETSNYLIVVGN 79
           +S   F+  + M+  G +   +VVV+ID GAT+NFI   LA  LKL  + T+   +++G 
Sbjct: 273 QSTTEFTKGKDMRFYGFISCHKVVVVIDSGATNNFISDELALVLKLPTSTTNQASVLLGQ 332

Query: 80  GTTIKGQGICRSILLMLQEITIMEDFLPLDLGK--MDIILG 119
              I+  G C  I L++QE+ I E+FL LDL K  +D+ILG
Sbjct: 333 RQCIQTIGTCFGINLLVQEVEINENFLLLDLTKTDVDVILG 373

[Close]
BLAST of ClCG01G012330 vs. NCBI nr
Match: gi|659077522|ref|XP_008439250.1| (PREDICTED: uncharacterized protein LOC103484090 [Cucumis melo])

HSP 1 Score: 156.8 bits (395), Expect = 1.5e-34
Identity = 73/140 (52.14%), Postives = 105/140 (75.00%), Query Frame = 1 

Query: 4   IETKALEVAENVELALRSVYGFSAPRTMKLKGVVRGKEVVVLIDYGATHNFIHQHLAEEL 63
           +E K LE+ E++ + L+++  FS+  TMKLKG +R KE+V+LID GATHNFIHQ LA +L
Sbjct: 133 VELKTLELTEDIAIELKTMTRFSSKGTMKLKGWIRQKEIVILIDSGATHNFIHQSLAVDL 192

Query: 64  KLQVAETSNYLIVVGNGTTIKGQGICRSILLMLQEITIMEDFLPLDLGKMDIILGIAWLC 123
           KL + + + +   +GNGT  KG+GICR + + L+EITI+ DFL ++LG +D +LG+ WL 
Sbjct: 193 KLGLEQHTQFGYTIGNGTRCKGKGICRRVEVKLEEITIIADFLAVELGSVDAVLGMQWLD 252

Query: 124 ATGFMRIHWPSLTMTFASKG 144
            TG M+IHWPSLTM+F ++G
Sbjct: 253 TTGTMKIHWPSLTMSFWNEG 272

[Close]
BLAST of ClCG01G012330 vs. NCBI nr
Match: gi|659109624|ref|XP_008454797.1| (PREDICTED: uncharacterized protein LOC103495115 [Cucumis melo])

HSP 1 Score: 154.1 bits (388), Expect = 9.7e-34
Identity = 73/140 (52.14%), Postives = 105/140 (75.00%), Query Frame = 1 

Query: 4   IETKALEVAENVELALRSVYGFSAPRTMKLKGVVRGKEVVVLIDYGATHNFIHQHLAEEL 63
           +E K LE+ E  E+ L+++ G ++  TMKLKG V  K++VVLID  AT+NFIHQ LAEEL
Sbjct: 133 VELKNLEITEGTEIELKTMTGLTSKGTMKLKGWVGDKKIVVLIDSEATYNFIHQSLAEEL 192

Query: 64  KLQVAETSNYLIVVGNGTTIKGQGICRSILLMLQEITIMEDFLPLDLGKMDIILGIAWLC 123
           K+++ + +++ + +G+GT  KG+G CR + L L+EITI+ DFL ++LG +D +LG+ WL 
Sbjct: 193 KMRLEQDTHFRVTIGDGTRCKGKGTCRRVELKLKEITIIADFLAVELGTVDAMLGMQWLD 252

Query: 124 ATGFMRIHWPSLTMTFASKG 144
            TG MRIHWPSLTMTF ++G
Sbjct: 253 ITGTMRIHWPSLTMTFWNEG 272

[Close]
BLAST of ClCG01G012330 vs. NCBI nr
Match: gi|659115482|ref|XP_008457581.1| (PREDICTED: uncharacterized protein LOC103497247 [Cucumis melo])

HSP 1 Score: 152.5 bits (384), Expect = 2.8e-33
Identity = 65/137 (47.45%), Postives = 103/137 (75.18%), Query Frame = 1 

Query: 3   EIETKALEVAENVELALRSVYGFSAPRTMKLKGVVRGKEVVVLIDYGATHNFIHQHLAEE 62
           E+E + LEV    E++LR++ GF++  TMKL+G ++G++V++LID GATHNFIHQ + +E
Sbjct: 216 EVEFETLEVKRKTEISLRTILGFTSKGTMKLRGTIKGRKVIILIDSGATHNFIHQGIVQE 275

Query: 63  LKLQVAETSNYLIVVGNGTTIKGQGICRSILLMLQEITIMEDFLPLDLGKMDIILGIAWL 122
           L L +   + + + +G+GTT++G+GIC+ I   L ++TI+EDFL ++LG++D++LG+ WL
Sbjct: 276 LALSLHGKTKFGVTIGDGTTLEGKGICKKIEAKLPKLTIVEDFLVIELGRIDLVLGMQWL 335

Query: 123 CATGFMRIHWPSLTMTF 140
             T FM IHWPS+ M F
Sbjct: 336 STTRFMGIHWPSMMMVF 352

[Close]
BLAST of ClCG01G012330 vs. NCBI nr
Match: gi|659094491|ref|XP_008448087.1| (PREDICTED: uncharacterized protein LOC103490375 [Cucumis melo])

HSP 1 Score: 149.1 bits (375), Expect = 3.1e-32
Identity = 85/227 (37.44%), Postives = 133/227 (58.59%), Query Frame = 1 

Query: 4   IETKALEVAENVELALRSVYGFSAPRTMKLKGVVRGKEVVVLIDYGATHNFIHQHLAEEL 63
           +E K LE+ E+V + ++++   S+  TMK+KG +R KE+V+LID GATHNFIHQ L  +L
Sbjct: 302 VELKTLELTEDVAIEMKTMTRLSSKGTMKIKGWIRQKEIVILIDSGATHNFIHQSLVVDL 361

Query: 64  KLQVAETSNYLIVVGNGTTIKGQGICRSILLMLQEITIMEDFLPLDLGKMDIILGIAWLC 123
           KL + + + +   +GNGT  KG+GICR + + L+EITI+ DFL ++LG +D +L + WL 
Sbjct: 362 KLGMEQHTQFGYTIGNGTRCKGKGICRRVEVKLEEITIIADFLAVELGSVDAVLEMQWLD 421

Query: 124 ATGFMRIHWPSLTMTFAS-------KGFTSDFEGNITKASMDRLWSPKLKEYWEKALMMM 183
            TG M+IHWPSLTM+F +       KG  S      +  ++++ W    + +  +   M 
Sbjct: 422 TTGTMKIHWPSLTMSFWNGGRQIILKGDPSLIRAECSLRTLEKTWQEDDQGFLLEWANME 481

Query: 184 VVAKTRIRYRTGWSEGRKDLVSEPVVKIFSWDVPEGMVRGPTGLVPK 224
           V  +T   Y+T   E + D    P+++       + +   P GL PK
Sbjct: 482 V--ETEDTYKTDKKE-KGDEADIPMIRFLLQQYTD-IFTTPKGLPPK 524

[Close]
BLAST of ClCG01G012330 vs. NCBI nr
Match: gi|778697580|ref|XP_011654353.1| (PREDICTED: uncharacterized protein LOC105435354 [Cucumis sativus])

HSP 1 Score: 148.7 bits (374), Expect = 4.1e-32
Identity = 65/136 (47.79%), Postives = 100/136 (73.53%), Query Frame = 1 

Query: 4   IETKALEVAENVELALRSVYGFSAPRTMKLKGVVRGKEVVVLIDYGATHNFIHQHLAEEL 63
           +E   L + E  E+ L++++G ++  TMK+KG ++GKEV++LID GATHNFIH  + EE+
Sbjct: 359 LELNQLTLEEGTEIELKAIHGLTSKGTMKIKGEIKGKEVLILIDSGATHNFIHNKIVEEV 418

Query: 64  KLQVAETSNYLIVVGNGTTIKGQGICRSILLMLQEITIMEDFLPLDLGKMDIILGIAWLC 123
            L++   + + + +G+GT  +G+G+C  + L L+EITI+ DFL ++LG +D+ILG+ WL 
Sbjct: 419 GLELENHTPFGVTIGDGTRCQGRGVCNRLELKLKEITIVADFLAIELGSVDVILGMQWLN 478

Query: 124 ATGFMRIHWPSLTMTF 140
            TG M+IHWPSLTMTF
Sbjct: 479 TTGTMKIHWPSLTMTF 494

The following BLAST results are available for this feature:
BLAST of ClCG01G012330 vs. TrEMBL
Match NameE-valueIdentityDescription
A5B2I6_VITVI2.3e-2945.11Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043911 PE=4 SV=1[more]
A0A087GEK8_ARAAL2.3e-2946.10Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G499800 PE=4 SV=1[more]
E5GC18_CUCME3.8e-2942.95Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
F6GVT4_VITVI8.6e-2945.11Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0083g00660 PE=4 SV=... [more]
A0A087GAS3_ARAAL1.6e-2741.67Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G317800 PE=4 SV=1[more]
BLAST of ClCG01G012330 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G29750.12.4e-1433.80 Eukaryotic aspartyl protease family protein[more]
AT3G30770.12.5e-1140.59 Eukaryotic aspartyl protease family protein[more]
BLAST of ClCG01G012330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659077522|ref|XP_008439250.1|1.5e-3452.14PREDICTED: uncharacterized protein LOC103484090 [Cucumis melo][more]
gi|659109624|ref|XP_008454797.1|9.7e-3452.14PREDICTED: uncharacterized protein LOC103495115 [Cucumis melo][more]
gi|659115482|ref|XP_008457581.1|2.8e-3347.45PREDICTED: uncharacterized protein LOC103497247 [Cucumis melo][more]
gi|659094491|ref|XP_008448087.1|3.1e-3237.44PREDICTED: uncharacterized protein LOC103490375 [Cucumis melo][more]
gi|778697580|ref|XP_011654353.1|4.1e-3247.79PREDICTED: uncharacterized protein LOC105435354 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013242Retroviral aspartyl protease
IPR021109Peptidase_aspartic_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G012330.1ClCG01G012330.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013242Retroviral aspartyl proteasePFAMPF08284RVP_2coord: 38..123
score: 2.5
IPR021109Aspartic peptidase domainunknownSSF50630Acid proteasescoord: 30..127
score: 1.4
NoneNo IPR availableunknownCoilCoilcoord: 442..473
score: -coord: 563..583
scor

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG01G012330Cla001072Watermelon (97103) v1wcgwmB148
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG01G012330Cucurbita pepo (Zucchini)cpewcgB453
ClCG01G012330Bottle gourd (USVL1VR-Ls)lsiwcgB231
ClCG01G012330Cucumber (Gy14) v2cgybwcgB023
ClCG01G012330Melon (DHL92) v3.6.1medwcgB133
ClCG01G012330Cucumber (Chinese Long) v3cucwcgB026
ClCG01G012330Watermelon (97103) v2wcgwmbB089
ClCG01G012330Wax gourdwcgwgoB232
ClCG01G012330Cucumber (Gy14) v1cgywcgB370
ClCG01G012330Cucurbita maxima (Rimu)cmawcgB183
ClCG01G012330Cucurbita maxima (Rimu)cmawcgB188
ClCG01G012330Cucurbita moschata (Rifu)cmowcgB179
ClCG01G012330Wild cucumber (PI 183967)cpiwcgB027
ClCG01G012330Cucumber (Chinese Long) v2cuwcgB024
ClCG01G012330Melon (DHL92) v3.5.1mewcgB141
ClCG01G012330Watermelon (97103) v1wcgwmB158