ClCG01G011510 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G011510
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Avr9/Cf-9 rapidly elicited protein 194
Location	CG_Chr01 : 19001433 .. 19001807 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTCACTTATCCTCCGATGACCACCGAGCTCCGTTCCCGTTCCCGACCCCGACTCCACCACCGCCTCGCCCTTGTGTCCCGATGACAATGCCCATGTCCAAGGCTTCTTCCAAGTTCTCTCGGTCGCTCTCCAAAATTCTCCGCTCTCTTTTTCGACCAAAACCTAATTCCAACGCCTCGATTTTTCGGGCTCAAGATCAACCCAAAGACGGATTTTACGTCTTCTATGAAGTCGGGTCTCTCTCGACCATCCCTGAAGTCCCCGAGGCCGACTTTGGAGCTGGTCTTTCGCCGGAGATTAGCTCTTTGGTGAATAAGACGACTTCTGAGAGGTTCACGCCTAACTCCCTTGGCATCTCATGTGTGATTTGA

mRNA sequence

ATGCCTCACTTATCCTCCGATGACCACCGAGCTCCGTTCCCGTTCCCGACCCCGACTCCACCACCGCCTCGCCCTTGTGTCCCGATGACAATGCCCATGTCCAAGGCTTCTTCCAAGTTCTCTCGGTCGCTCTCCAAAATTCTCCGCTCTCTTTTTCGACCAAAACCTAATTCCAACGCCTCGATTTTTCGGGCTCAAGATCAACCCAAAGACGGATTTTACGTCTTCTATGAAGTCGGGTCTCTCTCGACCATCCCTGAAGTCCCCGAGGCCGACTTTGGAGCTGGTCTTTCGCCGGAGATTAGCTCTTTGGTGAATAAGACGACTTCTGAGAGGTTCACGCCTAACTCCCTTGGCATCTCATGTGTGATTTGA

Coding sequence (CDS)

ATGCCTCACTTATCCTCCGATGACCACCGAGCTCCGTTCCCGTTCCCGACCCCGACTCCACCACCGCCTCGCCCTTGTGTCCCGATGACAATGCCCATGTCCAAGGCTTCTTCCAAGTTCTCTCGGTCGCTCTCCAAAATTCTCCGCTCTCTTTTTCGACCAAAACCTAATTCCAACGCCTCGATTTTTCGGGCTCAAGATCAACCCAAAGACGGATTTTACGTCTTCTATGAAGTCGGGTCTCTCTCGACCATCCCTGAAGTCCCCGAGGCCGACTTTGGAGCTGGTCTTTCGCCGGAGATTAGCTCTTTGGTGAATAAGACGACTTCTGAGAGGTTCACGCCTAACTCCCTTGGCATCTCATGTGTGATTTGA

Protein sequence

MPHLSSDDHRAPFPFPTPTPPPPRPCVPMTMPMSKASSKFSRSLSKILRSLFRPKPNSNASIFRAQDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVNKTTSERFTPNSLGISCVI

Homology

[Close]

BLAST of ClCG01G011510 vs. TrEMBL
Match: A0A0A0KV10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051450 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.3e-50
Identity = 104/127 (81.89%), Postives = 108/127 (85.04%), Query Frame = 1


Query: 1   MPHLSS---DDHRAPFPFPTPTPPPPRPCVPMTMPMSKASSKFSRSLSKILRSLFRPKPN 60
           MPHLS+   DDH        PTPPPPRPCVPMT PMSKASSKFSRS SKILRSLFRPKPN
Sbjct: 50  MPHLSTSSDDDHHQA---SLPTPPPPRPCVPMTTPMSKASSKFSRSFSKILRSLFRPKPN 109

Query: 61  SNASIFRAQDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVNKTTSERFTPNS 120
           SN  IFRAQDQP+DGFYVFYEVGSLSTIPEVPEAD GAGLSPEISSLV KT S RFTPNS
Sbjct: 110 SNTPIFRAQDQPRDGFYVFYEVGSLSTIPEVPEADLGAGLSPEISSLVKKTASGRFTPNS 169

Query: 121 LGISCVI 125
           +GISCV+
Sbjct: 170 IGISCVL 173

[Close]

BLAST of ClCG01G011510 vs. TrEMBL
Match: A0A059CFX6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01714 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.9e-20
Identity = 64/130 (49.23%), Postives = 81/130 (62.31%), Query Frame = 1


Query: 1   MPHLSSDDHRAPFPFPTPTPPP-PRPCVPMTMPMSKASSKFSRSLSKILRSLFRPKPNSN 60
           MPHL   D RA    P P PPP PRP  P     +K  S  SRS+ ++LRS+F+PKP+  
Sbjct: 51  MPHLP--DRRA---LPAPPPPPQPRPAAP-----AKKRSGISRSIQRLLRSVFKPKPSPT 110

Query: 61  ASIFRAQDQ------PKDGFYVFYEV-GSLSTIPEVPEADFGAGLSPEISSLVNKTTSER 120
           A+ F A D+       KDGFYV Y+  G+L+TIPE PE ++   LSPE+   V KT SER
Sbjct: 111 AA-FGAGDRYSRVAGEKDGFYVVYDKSGALTTIPEAPEVEYLGKLSPEMDRFVRKTASER 169

Query: 121 FTPNSLGISC 123
           F P+S+GISC
Sbjct: 171 FAPSSIGISC 169

[Close]

BLAST of ClCG01G011510 vs. TrEMBL
Match: A0A061G5W8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_016419 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.0e-19
Identity = 61/125 (48.80%), Postives = 85/125 (68.00%), Query Frame = 1


Query: 1   MPHLSSDDHRAPFPFPTPTPPPPRPCVPMTMPMSKASSKFSRSLSKILRSLFRPKPNSNA 60
           MPHL   D RAP       PPPP+  +P  +   K  SKFSRS+ K+ +S+F+ K +S++
Sbjct: 78  MPHLV--DTRAP-------PPPPQSTIPPPVVSKKQPSKFSRSIQKLFKSMFKFKQSSSS 137

Query: 61  SIFRAQDQPKDGFYVFYE-VGSLSTIPEVPEADFGAGLSPEISSL-VNKTTSERFT-PNS 120
           S+F  + +  + +YV Y+  G+L+TIPEVPE DFG GLSPEI+SL V +T SERFT  ++
Sbjct: 138 SVFWLKQRSHEEYYVVYDKTGALTTIPEVPEIDFG-GLSPEINSLVVKRTASERFTAAST 192

Query: 121 LGISC 123
           +GISC
Sbjct: 198 VGISC 192

[Close]

BLAST of ClCG01G011510 vs. TrEMBL
Match: M1AWR0_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400012296 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.5e-18
Identity = 63/123 (51.22%), Postives = 81/123 (65.85%), Query Frame = 1


Query: 1   MPHLSSDDHRAPFPFPTPTPPPPRPCVPMTMPMSKASSKFSRSLSKILRSLFRPKPNSNA 60
           MPHL   D R   P P+ T PP       T P+SK +++ SRS  K+L+S+FR K  SN+
Sbjct: 54  MPHLP--DRRVLIP-PSTTDPPQT-----TQPISKKTNRISRSFQKLLKSIFRAK-QSNS 113

Query: 61  SIFRAQDQPKDGFYVFYEV-GSLSTIPEVPEADFGAGLSPEISSLVNKTTSERFTPNSLG 120
            +F+ Q+  +DGFYV Y+  G+L+TIPE PE D   GLSPEI SLV +T SERFT  S+G
Sbjct: 114 PLFQGQN--RDGFYVVYDKSGALTTIPEGPEYD---GLSPEIKSLVRRTGSERFTATSIG 162

Query: 121 ISC 123
           ISC
Sbjct: 174 ISC 162

[Close]

BLAST of ClCG01G011510 vs. TrEMBL
Match: M5WBY6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017596mg PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.0e-18
Identity = 65/139 (46.76%), Postives = 84/139 (60.43%), Query Frame = 1


Query: 1   MPHLSSDDHRAPFPFPTPTPPPPRPCVPMTMPMSKASSKFSRSLSKILRSLFRPKPNSNA 60
           MPHLS    R   P   P PPP RP +  +     +S+K SRS+ K+LRS+F+P  +SN+
Sbjct: 100 MPHLSD---RRVLP---PAPPPSRPAITASNK-KPSSNKLSRSIQKLLRSVFKPNKSSNS 159

Query: 61  S--------IFRAQDQP----KDGFYVFYE-VGSLSTIPEVPEADFG-AGLSPEISSLVN 120
           +        +FR  D P    KDGF+V Y+  G+L+TIPEV   +F   GLSPEI +LV 
Sbjct: 160 NNKNNNSGVVFRVPDHPQANIKDGFFVVYDKTGALTTIPEVAPHEFNFGGLSPEIGALVG 219

Query: 121 KTTSERFTPNS---LGISC 123
           KTTSERFT  S   +GISC
Sbjct: 220 KTTSERFTATSTSNIGISC 231

[Close]

BLAST of ClCG01G011510 vs. TAIR10
Match: AT5G41810.1 (AT5G41810.1 unknown protein)

HSP 1 Score: 74.3 bits (181), Expect = 5.8e-14
Identity = 48/118 (40.68%), Postives = 67/118 (56.78%), Query Frame = 1


Query: 15  FPTPTPPPPRPCVPMTMPMSKASSKFSRSLSKILRSLFRPKPNSNAS-----IFRAQDQ- 74
           +  P PPPP      +    K S+K SRSL + L+S+F+PK + + +     +++A    
Sbjct: 174 YSPPLPPPPTTSSSSSSGGKKHSNKISRSLQRFLKSMFKPKQHQSLTTPSSPVYKAVGHG 233

Query: 75  --PKDGFYVFYEV-GSLSTIPEVPEADFGAGLSPEISSLVNKTTSERFTPNS-LGISC 123
              KD +YV Y+  GSL+TIPE  E +    +SPEI+SLV KT SERF  +  +GISC
Sbjct: 234 GGDKDRYYVVYDKSGSLTTIPESTEKE----VSPEINSLVRKTVSERFPASRVVGISC 287

[Close]

BLAST of ClCG01G011510 vs. TAIR10
Match: AT1G64340.1 (AT1G64340.1 unknown protein)

HSP 1 Score: 61.6 bits (148), Expect = 3.9e-10
Identity = 48/124 (38.71%), Postives = 61/124 (49.19%), Query Frame = 1


Query: 1   MPHLSSDDHRAPFPFPTPTPPPPRPCVPMTMPMSKASSKFSRSLSKILRSLFRPKPNSNA 60
           MPHLSS             PPP       T      + K SRSL K+++S+F+ K  SNA
Sbjct: 155 MPHLSSP------------PPPSETTSSSTKKQQSPTKKISRSLGKLIKSMFKQK-QSNA 214

Query: 61  SIFRAQDQPKD---GFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVNKTTSERFTPNS 120
            +F+      D    + VF + GSL+TIPE  E+    G   EI+SLV KTTSER   + 
Sbjct: 215 -LFKTGHSGVDMDKYYVVFDKTGSLTTIPESGESTEMVG--SEINSLVRKTTSERIPQSR 262

Query: 121 LGIS 122
           L +S
Sbjct: 275 LVVS 262

[Close]

BLAST of ClCG01G011510 vs. NCBI nr
Match: gi|778697524|ref|XP_011654341.1| (PREDICTED: uncharacterized protein LOC105435347 [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 4.7e-50
Identity = 104/127 (81.89%), Postives = 108/127 (85.04%), Query Frame = 1


Query: 1   MPHLSS---DDHRAPFPFPTPTPPPPRPCVPMTMPMSKASSKFSRSLSKILRSLFRPKPN 60
           MPHLS+   DDH        PTPPPPRPCVPMT PMSKASSKFSRS SKILRSLFRPKPN
Sbjct: 50  MPHLSTSSDDDHHQA---SLPTPPPPRPCVPMTTPMSKASSKFSRSFSKILRSLFRPKPN 109

Query: 61  SNASIFRAQDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVNKTTSERFTPNS 120
           SN  IFRAQDQP+DGFYVFYEVGSLSTIPEVPEAD GAGLSPEISSLV KT S RFTPNS
Sbjct: 110 SNTPIFRAQDQPRDGFYVFYEVGSLSTIPEVPEADLGAGLSPEISSLVKKTASGRFTPNS 169

Query: 121 LGISCVI 125
           +GISCV+
Sbjct: 170 IGISCVL 173

[Close]

BLAST of ClCG01G011510 vs. NCBI nr
Match: gi|659102113|ref|XP_008451959.1| (PREDICTED: uncharacterized protein LOC103493107 [Cucumis melo])

HSP 1 Score: 193.0 bits (489), Expect = 3.2e-46
Identity = 101/127 (79.53%), Postives = 106/127 (83.46%), Query Frame = 1


Query: 1   MPHLSSDD---HRAPFPFPTPTPPPPRPCVPMTMPMSKASSKFSRSLSKILRSLFRPKPN 60
           MPHLSS +   H+A  P    TPPPPR CVP     SKASSKFSRS SKILRSLFRPKPN
Sbjct: 50  MPHLSSSNGHHHQASLP----TPPPPRTCVP-----SKASSKFSRSFSKILRSLFRPKPN 109

Query: 61  SNASIFRAQDQPKDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVNKTTSERFTPNS 120
           SN  IFRAQDQP+DGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLV KT SERFTPNS
Sbjct: 110 SNTPIFRAQDQPRDGFYVFYEVGSLSTIPEVPEADFGAGLSPEISSLVKKTASERFTPNS 167

Query: 121 LGISCVI 125
           +GISCV+
Sbjct: 170 IGISCVL 167

[Close]

BLAST of ClCG01G011510 vs. NCBI nr
Match: gi|1009156719|ref|XP_015896390.1| (PREDICTED: probable inactive serine/threonine-protein kinase slob1 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 121.7 bits (304), Expect = 9.0e-25
Identity = 70/126 (55.56%), Postives = 86/126 (68.25%), Query Frame = 1


Query: 1   MPHLSSDDH-RAPFPFPTPTPPPPRPCVPMTM--PMSKASSKFSRSLSKILRSLFRPKPN 60
           MPHLS     R P   P P PPPP P  P T    ++K SSK SRSL+K+LRS+F+ K  
Sbjct: 67  MPHLSDRSRGRPPLLPPRPPPPPPPPAAPTTTVAAVNKKSSKLSRSLNKLLRSVFKSKN- 126

Query: 61  SNASIFRAQDQPKDGFYVFYEV-GSLSTIPEVPEADFGAGLSPEISSLVNKTTSERFTPN 120
               +FR ++Q +DGF+V Y+  G+L+TIPEVPE DFG GLSPEI SLV +T SERFT  
Sbjct: 127 ---PVFRVKEQSEDGFFVVYDKSGALTTIPEVPEIDFG-GLSPEIGSLVRRTGSERFTAA 186

Query: 121 SLGISC 123
           S+GISC
Sbjct: 187 SIGISC 187

[Close]

BLAST of ClCG01G011510 vs. NCBI nr
Match: gi|702323171|ref|XP_010053106.1| (PREDICTED: uncharacterized protein LOC104441641 [Eucalyptus grandis])

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-19
Identity = 64/130 (49.23%), Postives = 81/130 (62.31%), Query Frame = 1


Query: 1   MPHLSSDDHRAPFPFPTPTPPP-PRPCVPMTMPMSKASSKFSRSLSKILRSLFRPKPNSN 60
           MPHL   D RA    P P PPP PRP  P     +K  S  SRS+ ++LRS+F+PKP+  
Sbjct: 51  MPHLP--DRRA---LPAPPPPPQPRPAAP-----AKKRSGISRSIQRLLRSVFKPKPSPT 110

Query: 61  ASIFRAQDQ------PKDGFYVFYEV-GSLSTIPEVPEADFGAGLSPEISSLVNKTTSER 120
           A+ F A D+       KDGFYV Y+  G+L+TIPE PE ++   LSPE+   V KT SER
Sbjct: 111 AA-FGAGDRYSRVAGEKDGFYVVYDKSGALTTIPEAPEVEYLGKLSPEMDRFVRKTASER 169

Query: 121 FTPNSLGISC 123
           F P+S+GISC
Sbjct: 171 FAPSSIGISC 169

[Close]

BLAST of ClCG01G011510 vs. NCBI nr
Match: gi|590679047|ref|XP_007040470.1| (Uncharacterized protein TCM_016419 [Theobroma cacao])

HSP 1 Score: 102.8 bits (255), Expect = 4.3e-19
Identity = 61/125 (48.80%), Postives = 85/125 (68.00%), Query Frame = 1


Query: 1   MPHLSSDDHRAPFPFPTPTPPPPRPCVPMTMPMSKASSKFSRSLSKILRSLFRPKPNSNA 60
           MPHL   D RAP       PPPP+  +P  +   K  SKFSRS+ K+ +S+F+ K +S++
Sbjct: 78  MPHLV--DTRAP-------PPPPQSTIPPPVVSKKQPSKFSRSIQKLFKSMFKFKQSSSS 137

Query: 61  SIFRAQDQPKDGFYVFYE-VGSLSTIPEVPEADFGAGLSPEISSL-VNKTTSERFT-PNS 120
           S+F  + +  + +YV Y+  G+L+TIPEVPE DFG GLSPEI+SL V +T SERFT  ++
Sbjct: 138 SVFWLKQRSHEEYYVVYDKTGALTTIPEVPEIDFG-GLSPEINSLVVKRTASERFTAAST 192

Query: 121 LGISC 123
           +GISC
Sbjct: 198 VGISC 192

The following BLAST results are available for this feature:

BLAST of ClCG01G011510 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV10_CUCSA	3.3e-50	81.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G051450 PE=4 SV=1	[more]
A0A059CFX6_EUCGR	7.9e-20	49.23	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_D01714 PE=4 SV=1	[more]
A0A061G5W8_THECC	3.0e-19	48.80	Uncharacterized protein OS=Theobroma cacao GN=TCM_016419 PE=4 SV=1	[more]
M1AWR0_SOLTU	1.5e-18	51.22	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400012296 PE=4 SV=1	[more]
M5WBY6_PRUPE	2.0e-18	46.76	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017596mg PE=4 SV=1	[more]

BLAST of ClCG01G011510 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41810.1	5.8e-14	40.68	unknown protein	[more]
AT1G64340.1	3.9e-10	38.71	unknown protein	[more]

BLAST of ClCG01G011510 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778697524\|ref\|XP_011654341.1\|	4.7e-50	81.89	PREDICTED: uncharacterized protein LOC105435347 [Cucumis sativus]	[more]
gi\|659102113\|ref\|XP_008451959.1\|	3.2e-46	79.53	PREDICTED: uncharacterized protein LOC103493107 [Cucumis melo]	[more]
gi\|1009156719\|ref\|XP_015896390.1\|	9.0e-25	55.56	PREDICTED: probable inactive serine/threonine-protein kinase slob1 isoform X1 [Z...	[more]
gi\|702323171\|ref\|XP_010053106.1\|	1.1e-19	49.23	PREDICTED: uncharacterized protein LOC104441641 [Eucalyptus grandis]	[more]
gi\|590679047\|ref\|XP_007040470.1\|	4.3e-19	48.80	Uncharacterized protein TCM_016419 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G011510.1	ClCG01G011510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33978	FAMILY NOT NAMED	coord: 1..123 score: 1.1
None	No IPR available	PANTHER	PTHR33978:SF4	SUBFAMILY NOT NAMED	coord: 1..123 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G011510	Wild cucumber (PI 183967)	cpiwcgB025
ClCG01G011510	Cucumber (Chinese Long) v2	cuwcgB022
ClCG01G011510	Watermelon (97103) v1	wcgwmB155
ClCG01G011510	Cucurbita pepo (Zucchini)	cpewcgB006
ClCG01G011510	Bottle gourd (USVL1VR-Ls)	lsiwcgB169
ClCG01G011510	Cucumber (Gy14) v2	cgybwcgB021
ClCG01G011510	Cucumber (Chinese Long) v3	cucwcgB024
ClCG01G011510	Watermelon (97103) v2	wcgwmbB089
ClCG01G011510	Wax gourd	wcgwgoB241
ClCG01G011510	Cucumber (Gy14) v1	cgywcgB552
ClCG01G011510	Cucurbita maxima (Rimu)	cmawcgB180
ClCG01G011510	Cucurbita maxima (Rimu)	cmawcgB341
ClCG01G011510	Cucurbita moschata (Rifu)	cmowcgB171
ClCG01G011510	Cucurbita moschata (Rifu)	cmowcgB342