ClCG01G011330 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G011330
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr01 : 18600195 .. 18601150 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCCGACAAACCAAACGAGGTAGGCAAGCAGACGCCGAAACATCGCATGTTATCGGTGGATTTCGAGAAGGTTCGGAGGGAGATTCTAGTAACCCTCAGGTAAATATGGAAGATCAAATCTTTAATAGAATAGCCCAAGGGTTGGCATCTAGTGCTGAAACAGCTCAAGGAGATCCCGAGAGAAAGTATGAGATCAAGAGGTTCAAAGCCTTAGAAGCTCAGGTATTTGAGGGAATCACTGATCCTGAAGATGTCGAAGTATGACTAAACCAGATAGAGAAATGCTTCAGGGTCATGCGTTGTCCTGAAGAGAGGAAACTTGATTTGGTTACTTATTTGCTCTAGAAAGGAGTGGAGGATTGGTGGAAGTTGATAGAAAATAGGGGAAATGATGCAGATCCTCTAACGTGGGTAGCCTTTAAGAAGGCTTTTCAAGATAAATATTACCCACATACATATTGTGACGAGAAGAGGGATGAGTTTTTAAGATTGGTGCAAGGGATATGACTGTAGCTGAGTACGAAAAGAAGTTTACAAAGCTAGCTAAGTACGCTCTAACAATGATTGTGGATGAAGCTGATAAGTGCAAGTGTTTTGTGTTAGGTTTGCATAGTAAAATCCGTACTCCAGTTACAACAAGTATAGTGTGGACAAACTTTGCACGAATGATTGAGGCTGCCATGAGAGCTAAAAAGAGTATAACTGGTGGGAAGCCTGAGAGGGAAGGAAATAAAGGAGATTATAGAACGGGACAAGCTTTGGGTACATCTCGGGAACAGTCTTACCGAGGTGATAGTAGAAGGTTTGTACCCAGTGTTTCTAGTAATAGAAGTTTTAAAGCTTGATTTGGCGGATCATACTTTACAAGACCTAGAGGTGGTGGTTCAAGACAAACTCAGAGGGGTTTTCCTCAGACTTTGGGACCTCCAAGTGGTTCATAGTTTAGGCAACTGA

mRNA sequence

ATGCCCGACAAACCAAACGAGGTAGGCAAGCAGACGCCGAAACATCGCATGTTATCGGTGGATTTCGAGAAGGTTCGGAGGGAGATTCTAGTAACCCTCAGTGCTGAAACAGCTCAAGGAGATCCCGAGAGAAAGTATGAGATCAAGAGGTTCAAAGCCTTAGAAGCTCAGGTATTTGAGGGAATCACTGATCCTGAAGATGTCGAAAAAGGAGTGGAGGATTGGTGGAAGTTGATAGAAAATAGGGGAAATGATGCAGATCCTCTAACGTGGATTGGTGCAAGGGATATGACTGTAGCTGAGTACGAAAAGAAGTTTACAAAGCTAGCTAAGTACGCTCTAACAATGATTGTGGATGAAGCTGATAAGTGCAAGTGTTTTGTGTTAGGTTTGCATAGTAAAATCCGTACTCCAGTTACAACAAGTATAGTGTGGACAAACTTTGCACGAATGATTGAGGCTGCCATGAGAGCTAAAAAGAGTATAACTGGTGGGAAGCCTGAGAGGGAAGGAAATAAAGGAGATTATAGAACGGGACAAGCTTTGGGTACATCTCGGGAACAGTCTTACCGAGGTGATAGTAGAAGGTTTGTACCCAGTGTTTCTAACCTAGAGGTGGTGGTTCAAGACAAACTCAGAGGGGTTTTCCTCAGACTTTGGGACCTCCAAGTGGTTCATAGTTTAGGCAACTGA

Coding sequence (CDS)

ATGCCCGACAAACCAAACGAGGTAGGCAAGCAGACGCCGAAACATCGCATGTTATCGGTGGATTTCGAGAAGGTTCGGAGGGAGATTCTAGTAACCCTCAGTGCTGAAACAGCTCAAGGAGATCCCGAGAGAAAGTATGAGATCAAGAGGTTCAAAGCCTTAGAAGCTCAGGTATTTGAGGGAATCACTGATCCTGAAGATGTCGAAAAAGGAGTGGAGGATTGGTGGAAGTTGATAGAAAATAGGGGAAATGATGCAGATCCTCTAACGTGGATTGGTGCAAGGGATATGACTGTAGCTGAGTACGAAAAGAAGTTTACAAAGCTAGCTAAGTACGCTCTAACAATGATTGTGGATGAAGCTGATAAGTGCAAGTGTTTTGTGTTAGGTTTGCATAGTAAAATCCGTACTCCAGTTACAACAAGTATAGTGTGGACAAACTTTGCACGAATGATTGAGGCTGCCATGAGAGCTAAAAAGAGTATAACTGGTGGGAAGCCTGAGAGGGAAGGAAATAAAGGAGATTATAGAACGGGACAAGCTTTGGGTACATCTCGGGAACAGTCTTACCGAGGTGATAGTAGAAGGTTTGTACCCAGTGTTTCTAACCTAGAGGTGGTGGTTCAAGACAAACTCAGAGGGGTTTTCCTCAGACTTTGGGACCTCCAAGTGGTTCATAGTTTAGGCAACTGA

Protein sequence

MPDKPNEVGKQTPKHRMLSVDFEKVRREILVTLSAETAQGDPERKYEIKRFKALEAQVFEGITDPEDVEKGVEDWWKLIENRGNDADPLTWIGARDMTVAEYEKKFTKLAKYALTMIVDEADKCKCFVLGLHSKIRTPVTTSIVWTNFARMIEAAMRAKKSITGGKPEREGNKGDYRTGQALGTSREQSYRGDSRRFVPSVSNLEVVVQDKLRGVFLRLWDLQVVHSLGN
Homology
[Close]
BLAST of ClCG01G011330 vs. TrEMBL
Match: A0A0A0KYX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G436990 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.3e-11
Identity = 32/76 (42.11%), Postives = 56/76 (73.68%), Query Frame = 1 

Query: 87  DPLTWIGARDMTVAEYEKKFTKLAKYALTMIVDEADKCKCFVLGLHSKIRTPVTTSIVWT 146
           D   ++  R ++V EYE+KFTKLAKYAL +IVDE ++C+C +  L  +IRT +   ++ +
Sbjct: 3   DEFLYLEQRRLSVPEYERKFTKLAKYALILIVDEGERCRCSINDLREEIRTSIVLILIRS 62

Query: 147 NFARMIEAAMRAKKSI 163
           ++A++++AA+R +KS+
Sbjct: 63  DYAQLVDAALRVEKSL 78

[Close]
BLAST of ClCG01G011330 vs. TrEMBL
Match: A0A0A0KPI9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G034500 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.4e-08
Identity = 34/77 (44.16%), Postives = 50/77 (64.94%), Query Frame = 1 

Query: 97  MTVAEYEKKFTKLAKYALTMIVDEADKCKCFVLGLHSKIRTPVTTSIVWTNFARMIEAAM 156
           MT+AEYEKK+ KL ++A ++I DEA  CK    GL  +IRT VT    W +F++++EAA+
Sbjct: 1   MTIAEYEKKYKKLYEHATSVIEDEAKDCKRVEEGLREEIRTSVTPCAKWIDFSKLVEAAI 60

Query: 157 RAKKSITGGKPEREGNK 174
           R + ++   K E E  K
Sbjct: 61  RVQINVHERKLESEALK 77

[Close]
BLAST of ClCG01G011330 vs. TrEMBL
Match: M5VHX2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026182mg PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.9e-07
Identity = 41/138 (29.71%), Postives = 66/138 (47.83%), Query Frame = 1 

Query: 70  KGVEDWWKLIENRGNDADPLTWIGARD------------MTVAEYEKKFTKLAKYALTMI 129
           +    WW  ++ R  D   +TW   R             MTV +YEKKF  ++KY L ++
Sbjct: 140 RNARHWWDSVKRRYRDPLAITWQVFRAAFDKFLQLEQGMMTVLQYEKKFHDVSKYCLPLV 199

Query: 130 VDEADKCKCFVLGLHSKIRTPVTTSIVWTNFARMIEAAMRAKKSITGGKPEREGNKGDYR 189
            DE++KC+ F +GL + IR  V +  + TNF  +  +A   + S    +P  E  +  + 
Sbjct: 200 EDESEKCQLFTMGLKASIRDIVISQRL-TNFGNVAMSASLIESSQMMARPRGELCRQQFE 259

Query: 190 -TGQALGTSREQSYRGDS 195
             G + G+S+  SY   S
Sbjct: 260 ICGPSQGSSKRGSYSSGS 276

[Close]
BLAST of ClCG01G011330 vs. TrEMBL
Match: A0A0A0KCJ9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G240700 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.8e-07
Identity = 27/63 (42.86%), Postives = 47/63 (74.60%), Query Frame = 1 

Query: 94  ARDMTVAEYEKKFTKLAKYALTMIVDEADKCKCFVLGLHSKIRTPVTTSIVWTNFARMIE 153
           AR+++VA+YEKKFT+LAKYA+ ++  E ++C  FV GL  + R P+ +  V  ++A++++
Sbjct: 2   ARELSVAKYEKKFTELAKYAMVLVALETERCMQFVNGLRGETRPPIVSITVRNDYAQLVD 61

Query: 154 AAM 157
           AA+
Sbjct: 62  AAV 64

[Close]
BLAST of ClCG01G011330 vs. TrEMBL
Match: M5X787_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022673mg PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.4e-06
Identity = 36/99 (36.36%), Postives = 55/99 (55.56%), Query Frame = 1 

Query: 97  MTVAEYEKKFTKLAKYALTMIVDEADKCKCFVLGLHSKIRTPVTTSIVWTNFARMIEAAM 156
           MTV EYEKKF  L+KY L ++ DE+ KC+ F +GL + IR  V +  + TNF  ++ +A 
Sbjct: 193 MTVLEYEKKFHDLSKYCLPLVEDESKKCQLFTMGLKASIRDIVISQRL-TNFGDVVMSAS 252

Query: 157 RAKKSITGGKPEREGNKGDYRT-GQALGTSREQSYRGDS 195
             + S    +P  E  +  +   G + G+S+  SY   S
Sbjct: 253 LIESSQMMARPRGELRRQQFEIGGPSQGSSKRGSYSSGS 290

[Close]
BLAST of ClCG01G011330 vs. NCBI nr
Match: gi|659116534|ref|XP_008458118.1| (PREDICTED: uncharacterized protein LOC103497647 [Cucumis melo])

HSP 1 Score: 115.2 bits (287), Expect = 1.6e-22
Identity = 81/260 (31.15%), Postives = 126/260 (48.46%), Query Frame = 1 

Query: 3   DKPNEVGKQTPKHRM--LSVDFEKVRREIL--VTLSAETAQGDPERKYEIKRFKALEAQV 62
           D  NE  +    H+   ++VD EK+  +I   +T    +   + E+ + I+R KAL A  
Sbjct: 23  DLENEESEGESSHQQGDMTVD-EKLLNKITEGITTGMRSLNNNLEKTFGIERLKALGATT 82

Query: 63  FEGITDP--------------------ED---------VEKGVEDWWKLIENRGNDADPL 122
           F   TDP                    +D         ++KG + WW+  E+R +D + +
Sbjct: 83  FARTTDPTDGEGWMNVLEKCFKVMRCLDDRKVELATFLLKKGADYWWRTFESRYHDTNEI 142

Query: 123 TW--------------------------IGARDMTVAEYEKKFTKLAKYALTMIVDEADK 182
           +W                          +    MT+AEYEKK+ KL+KYA +MI DE D+
Sbjct: 143 SWNEFKKAFYEKYYPRSYKDAKRSEFFRLVLGSMTIAEYEKKYIKLSKYATSMIEDEIDR 202

Query: 183 CKCFVLGLHSKIRTPVTTSIVWTNFARMIEAAMRAKKSITGGKPEREGNKGDYRTGQALG 204
           CK F  GL  +IRTPVT S  W  F++++E A+R +KS+   K E+E ++ +  T    G
Sbjct: 203 CKRFEDGLREEIRTPVTASSEWKEFSKLVETAVRVEKSLAERKNEKEVSR-NVSTAITQG 262

[Close]
BLAST of ClCG01G011330 vs. NCBI nr
Match: gi|659112465|ref|XP_008456237.1| (PREDICTED: uncharacterized protein LOC103496240 [Cucumis melo])

HSP 1 Score: 99.4 bits (246), Expect = 8.9e-18
Identity = 63/162 (38.89%), Postives = 88/162 (54.32%), Query Frame = 1 

Query: 41  DPERKYEIKRFKALEAQVFEGITDPEDVEKGVEDWWKLIENRGNDADPLTWIGARDMTVA 100
           DPE+ YEI+R K L A VFEG TD  D E+           R    D    +     +VA
Sbjct: 44  DPEKMYEIERLKKLGATVFEGSTDLADAEEKYYPTTYCEAKR----DEFLELKQGSFSVA 103

Query: 101 EYEKKFTKLAKYALTMIVDEADKCKCFVLGLHSKIRTPVTTSIVWTNFARMIEAAMRAKK 160
           EYE+K+T+L++YA  ++  E+D C+ F  GL  +IRT VT    WTNF++++E A+R ++
Sbjct: 104 EYERKYTELSRYAEMIVASESDMCRRFERGLRFEIRTLVTAIAKWTNFSQLVETALRVEQ 163

Query: 161 SITGGKPEREGNKGDYRTGQALGTSREQSYRGDSRRFVPSVS 203
           SI   K   E ++G   T    G  REQ      RRF P V+
Sbjct: 164 SIVEEKSAMELSRGVSTTSGIRG--REQ------RRFTPGVN 193

[Close]
BLAST of ClCG01G011330 vs. NCBI nr
Match: gi|659130058|ref|XP_008464978.1| (PREDICTED: uncharacterized protein LOC103502718 [Cucumis melo])

HSP 1 Score: 88.2 bits (217), Expect = 2.0e-14
Identity = 48/132 (36.36%), Postives = 78/132 (59.09%), Query Frame = 1 

Query: 46  YEIKRFKALEAQVFEGITDPEDVE--KGV-EDWWKLIENRGNDADPLTWIGARDMTVAEY 105
           Y I+R K L A VFEG TDP + E  +G+ E+ +          D    +    ++V EY
Sbjct: 2   YGIERLKKLGATVFEGFTDPANTETFRGIFEEKYYPTTYYEAKRDEFLELKQGSLSVVEY 61

Query: 106 EKKFTKLAKYALTMIVDEADKCKCFVLGLHSKIRTPVTTSIVWTNFARMIEAAMRAKKSI 165
           E+K+T+L++YA  ++  E+D+C+ F  GL  +IRTP+T    W NF++++E A+R ++SI
Sbjct: 62  ERKYTELSRYAEMIVASESDRCRRFERGLRFEIRTPMTAIAKWMNFSQLVETALRVEQSI 121

Query: 166 TGGKPEREGNKG 175
              K   E ++G
Sbjct: 122 VEEKSTMELSRG 133

[Close]
BLAST of ClCG01G011330 vs. NCBI nr
Match: gi|778697787|ref|XP_011654404.1| (PREDICTED: uncharacterized protein LOC105435385 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 1.9e-12
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 1 

Query: 97  MTVAEYEKKFTKLAKYALTMIVDEADKCKCFVLGLHSKIRTPVTTSIVWTNFARMIEAAM 156
           M VAEYEKK+TKL+KYA ++I DE ++CK F  GL  +IRT VT    W +F++ +EAA+
Sbjct: 1   MIVAEYEKKYTKLSKYATSVIEDEIERCKQFEEGLREEIRTLVTACADWVDFSKSMEAAL 60

Query: 157 RAKKSITGGKPEREGNK 174
           R +KS+   K ERE +K
Sbjct: 61  RVEKSVYERKREREASK 77

[Close]
BLAST of ClCG01G011330 vs. NCBI nr
Match: gi|659118041|ref|XP_008458920.1| (PREDICTED: uncharacterized protein LOC103498182 [Cucumis melo])

HSP 1 Score: 81.3 bits (199), Expect = 2.5e-12
Identity = 49/151 (32.45%), Postives = 73/151 (48.34%), Query Frame = 1 

Query: 68  VEKGVEDWWKLIENRGNDADPLTWIGARDMTV--------------------------AE 127
           ++K  E WWK I  R NDA  L W   R +                            AE
Sbjct: 16  LQKEAEGWWKSIIARRNDARTLDWQTFRGIFEEKYYPTTYCEAKRDEFLELKQGSLSMAE 75

Query: 128 YEKKFTKLAKYALTMIVDEADKCKCFVLGLHSKIRTPVTTSIVWTNFARMIEAAMRAKKS 187
           YE+K+T+L++YA  ++  E+D+C  F  GL  +IRTPVT    WTNF++++E A+R ++S
Sbjct: 76  YERKYTELSRYAGMIMASESDRCHRFERGLRFEIRTPVTAIAKWTNFSQLVETALRVEQS 135

Query: 188 ITGGKPEREGNKGDYRTGQALGTSREQSYRG 193
           I   K   E ++G   T    G  + +   G
Sbjct: 136 IVEEKSAMELSRGVSTTSGIRGPEQRRFTSG 166

The following BLAST results are available for this feature:
BLAST of ClCG01G011330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYX4_CUCSA4.3e-1142.11Uncharacterized protein OS=Cucumis sativus GN=Csa_4G436990 PE=4 SV=1[more]
A0A0A0KPI9_CUCSA3.4e-0844.16Uncharacterized protein OS=Cucumis sativus GN=Csa_5G034500 PE=4 SV=1[more]
M5VHX2_PRUPE2.9e-0729.71Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026182mg PE=4 SV=1[more]
A0A0A0KCJ9_CUCSA3.8e-0742.86Uncharacterized protein OS=Cucumis sativus GN=Csa_6G240700 PE=4 SV=1[more]
M5X787_PRUPE2.4e-0636.36Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022673mg PE=4 SV=1[more]
BLAST of ClCG01G011330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659116534|ref|XP_008458118.1|1.6e-2231.15PREDICTED: uncharacterized protein LOC103497647 [Cucumis melo][more]
gi|659112465|ref|XP_008456237.1|8.9e-1838.89PREDICTED: uncharacterized protein LOC103496240 [Cucumis melo][more]
gi|659130058|ref|XP_008464978.1|2.0e-1436.36PREDICTED: uncharacterized protein LOC103502718 [Cucumis melo][more]
gi|778697787|ref|XP_011654404.1|1.9e-1251.95PREDICTED: uncharacterized protein LOC105435385 [Cucumis sativus][more]
gi|659118041|ref|XP_008458920.1|2.5e-1232.45PREDICTED: uncharacterized protein LOC103498182 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G011330.1ClCG01G011330.1mRNA