ClCG01G010710 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G010710
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	RING zinc finger protein-like
Location	CG_Chr01 : 16702443 .. 16703201 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACATCTATTTTGCAGATGTCCTGTCCGTAGCATATCGAAACAGTTCTTCTGTCAGGATGTGGAAGTTGGCATCGAACGCCATTGCTGGCATTCGATCTAAGAAAAACTCAGCTGAATGTAAGCCAGTTTTCTGGGAATGCTCGGATGACGATGTTTGCTCGGAAAGCAGTGGAGATGAAGAACTGGAATGCCCTATTTGCTGGGAATCCTTTAACATTGTGGAGAATGTACCTTATGTCTTATGGTGTGGCCATTCCTTGTGCAAAAATTGTGTATTAGGGCTTCAAGGGTCTGTGCTGAAACTAGCAACTCGCCAAATCCGAATCCCGATCTTCATTTCGTGCCCTTGGTGTCATCAGCTATCGCTAAGGGTGGTATACAAGGGAAACCTGAAGTTTCCCAGCAAGAACTTTTTTCTTCTTTGGATGGTTGAGAGCTTTAATGGTAATGAGGGAAAACTTGACCATTCCTTCAATGAGGATAATCAACCAGTTTTTTCTCTGCCATCCGATACCGATACTTCTGAGAGGCGGCGATTGTTTTTCTATAATCATTTGGATTGCCTCTTCCATTTAATCTTCAAGTTTCTACTGGTTGTCATATTTCTTCTCATAGTTGTTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTCTACCTCCTAATCACTTTACTTTTTGCATTACCATCTTTGCTGATATTTTATCTTGCACTCCATGCTTTGGAAAAGCTTATGAATGGTATAACTTCATGA

mRNA sequence

ATGAACATCTATTTTGCAGATGTCCTGTCCGTAGCATATCGAAACAGTTCTTCTGTCAGGATGTGGAAGTTGGCATCGAACGCCATTGCTGGCATTCGATCTAAGAAAAACTCAGCTGAATGTAAGCCAGTTTTCTGGGAATGCTCGGATGACGATGTTTGCTCGGAAAGCAGTGGAGATGAAGAACTGGAATGCCCTATTTGCTGGGAATCCTTTAACATTGTGGAGAATGTACCTTATGTCTTATGGTGTGGCCATTCCTTGTGCAAAAATTGTGTATTAGGGCTTCAAGGGTCTGTGCTGAAACTAGCAACTCGCCAAATCCGAATCCCGATCTTCATTTCGTGCCCTTGGTGTCATCAGCTATCGCTAAGGGTGGTATACAAGGGAAACCTGAAGTTTCCCAGCAAGAACTTTTTTCTTCTTTGGATGGTTGAGAGCTTTAATGGTAATGAGGGAAAACTTGACCATTCCTTCAATGAGGATAATCAACCAGTTTTTTCTCTGCCATCCGATACCGATACTTCTGAGAGGCGGCGATTGTTTTTCTATAATCATTTGGATTGCCTCTTCCATTTAATCTTCAAGTTTCTACTGGTTGTCATATTTCTTCTCATAGTTGTTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTCTACCTCCTAATCACTTTACTTTTTGCATTACCATCTTTGCTGATATTTTATCTTGCACTCCATGCTTTGGAAAAGCTTATGAATGGTATAACTTCATGA

Coding sequence (CDS)

ATGAACATCTATTTTGCAGATGTCCTGTCCGTAGCATATCGAAACAGTTCTTCTGTCAGGATGTGGAAGTTGGCATCGAACGCCATTGCTGGCATTCGATCTAAGAAAAACTCAGCTGAATGTAAGCCAGTTTTCTGGGAATGCTCGGATGACGATGTTTGCTCGGAAAGCAGTGGAGATGAAGAACTGGAATGCCCTATTTGCTGGGAATCCTTTAACATTGTGGAGAATGTACCTTATGTCTTATGGTGTGGCCATTCCTTGTGCAAAAATTGTGTATTAGGGCTTCAAGGGTCTGTGCTGAAACTAGCAACTCGCCAAATCCGAATCCCGATCTTCATTTCGTGCCCTTGGTGTCATCAGCTATCGCTAAGGGTGGTATACAAGGGAAACCTGAAGTTTCCCAGCAAGAACTTTTTTCTTCTTTGGATGGTTGAGAGCTTTAATGGTAATGAGGGAAAACTTGACCATTCCTTCAATGAGGATAATCAACCAGTTTTTTCTCTGCCATCCGATACCGATACTTCTGAGAGGCGGCGATTGTTTTTCTATAATCATTTGGATTGCCTCTTCCATTTAATCTTCAAGTTTCTACTGGTTGTCATATTTCTTCTCATAGTTGTTTTTGTAATCCCTGGAAGTGCACTCATCTTGCTGCTCTACCTCCTAATCACTTTACTTTTTGCATTACCATCTTTGCTGATATTTTATCTTGCACTCCATGCTTTGGAAAAGCTTATGAATGGTATAACTTCATGA

Protein sequence

MNIYFADVLSVAYRNSSSVRMWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFFLLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDTSERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNGITS

Homology

[Close]

BLAST of ClCG01G010710 vs. TrEMBL
Match: V7CH03_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G068700g PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 1.6e-72
Identity = 143/261 (54.79%), Postives = 173/261 (66.28%), Query Frame = 1


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MW  ASNA+  IR+K+++ +      ECSDD+VCS SS DE LECPICWESFNIVENVPY
Sbjct: 1   MWSFASNALTSIRTKRSTKQLSETNAECSDDEVCSNSSRDEGLECPICWESFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGH+LCKNCVLGLQ +VL   T+QIRIP FISCPWCH LS R++YKGNLK+P KNFF
Sbjct: 61  VLWCGHTLCKNCVLGLQWAVLNFPTQQIRIPFFISCPWCHLLSFRIIYKGNLKYPCKNFF 120

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFS-----LPSDTDTSERRRL-------------- 200
           LLWMVES NG   KL  S   D QP++S     L S   T   RR               
Sbjct: 121 LLWMVESLNGERHKLVSSCG-DTQPIWSPKCNLLGSQVSTCNLRRASMSPYSRQVGSNRD 180

Query: 201 --------FFYNH--LDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALP 253
                   +F  H  LD   H   KF L+VIFLLI +F +PGSA+IL+LYLL+T++FA+P
Sbjct: 181 VGVSGEAHYFSLHKSLDFFLHFTSKFPLIVIFLLIALFAVPGSAVILILYLLVTIIFAIP 240

[Close]

BLAST of ClCG01G010710 vs. TrEMBL
Match: A0A151TFE0_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_012038 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.4e-71
Identity = 144/262 (54.96%), Postives = 175/262 (66.79%), Query Frame = 1


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MW+ ASNA+  IR K++S E      +CSDD+VCS +S DE LECPICWESFNIVENVPY
Sbjct: 1   MWRFASNALTCIRKKRSSKEPSHDNADCSDDEVCSNASRDEGLECPICWESFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGH+LCKNCVLGLQ +V+K  T+QI+IP FISCPWCH LSLR +YKGNLK+P KNFF
Sbjct: 61  VLWCGHTLCKNCVLGLQWAVVKFPTQQIKIPFFISCPWCHLLSLRFIYKGNLKYPCKNFF 120

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFS--------------------------LPSDTD 200
           LLWMVES NG+  KL  +  E NQP++S                          L S+ D
Sbjct: 121 LLWMVESLNGDRHKLVSTCAE-NQPIWSPKCNLLGSQVTNCNLRRASISHCSGQLGSNRD 180

Query: 201 T----SERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFAL 253
                 E R       LD  FHL  KF LV+IFLLI +F IP SA+IL+LYLL+T+LFA+
Sbjct: 181 VGVSDGETRYFNLLKSLDFFFHLTAKFPLVIIFLLIALFAIPCSAVILVLYLLVTILFAI 240

[Close]

BLAST of ClCG01G010710 vs. TrEMBL
Match: A0A0S3T1L8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G048700 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.6e-70
Identity = 140/261 (53.64%), Postives = 172/261 (65.90%), Query Frame = 1


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MW  ASNA+  +R+K+ S +      ECSDD+VCS SS DE LECPICWESFNIVENVPY
Sbjct: 2   MWSFASNALTSLRTKRCSKQFSETNAECSDDEVCSNSSRDEGLECPICWESFNIVENVPY 61

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGH+LCKNCVLGLQ +V+   T+QIRIP FISCPWCH LS R++Y GNLK+P KNFF
Sbjct: 62  VLWCGHTLCKNCVLGLQWAVVNFPTQQIRIPFFISCPWCHLLSFRIIYNGNLKYPCKNFF 121

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFS-----LPSDTDTSERRRL-------------- 200
           LLWMVES NG+  KL  S + D QP++S     L S   T  +RR               
Sbjct: 122 LLWMVESLNGDRHKLVSS-SGDTQPIWSPKCNLLGSQVSTCNQRRASMSPYSRQVGSDRH 181

Query: 201 --------FFYNH--LDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALP 253
                   +F  H  LD       KF L+VIFLLI +F +PGS +IL+LYLL+T+LFA+P
Sbjct: 182 VGASGDTHYFSLHKSLDFFLRFTSKFPLIVIFLLIALFAVPGSVVILILYLLLTILFAVP 241

[Close]

BLAST of ClCG01G010710 vs. TrEMBL
Match: A0A0L9UTG9_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g118800 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.6e-70
Identity = 140/261 (53.64%), Postives = 172/261 (65.90%), Query Frame = 1


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MW  ASNA+  +R+K+ S +      ECSDD+VCS SS DE LECPICWESFNIVENVPY
Sbjct: 2   MWSFASNALTSLRTKRCSKQFSETNAECSDDEVCSNSSRDEGLECPICWESFNIVENVPY 61

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGH+LCKNCVLGLQ +V+   T+QIRIP FISCPWCH LS R++Y GNLK+P KNFF
Sbjct: 62  VLWCGHTLCKNCVLGLQWAVVNFPTQQIRIPFFISCPWCHLLSFRIIYNGNLKYPCKNFF 121

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFS-----LPSDTDTSERRRL-------------- 200
           LLWMVES NG+  KL  S + D QP++S     L S   T  +RR               
Sbjct: 122 LLWMVESLNGDRHKLVSS-SGDTQPIWSPKCNLLGSQVSTCNQRRASMSPYSRQVGSDRH 181

Query: 201 --------FFYNH--LDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALP 253
                   +F  H  LD       KF L+VIFLLI +F +PGS +IL+LYLL+T+LFA+P
Sbjct: 182 VGASGDTHYFSLHKSLDFFLRFTSKFPLIVIFLLIALFAVPGSVVILILYLLLTILFAVP 241

[Close]

BLAST of ClCG01G010710 vs. TrEMBL
Match: A0A0D2RKN8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G144000 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 3.4e-70
Identity = 139/264 (52.65%), Postives = 170/264 (64.39%), Query Frame = 1


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MW  ASN IA I   K+S E      ECSDD++CS  S DE LECPICWE FNIVENVPY
Sbjct: 1   MWSFASNTIASI-GLKSSKEANQACSECSDDELCSNGSRDEGLECPICWEPFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGH+LC+NC+LGLQ +VLKL T+QI+IP+FISCPWCH +SLR+VYKGNLKFP KNFF
Sbjct: 61  VLWCGHTLCQNCILGLQPAVLKLPTQQIKIPMFISCPWCHLISLRLVYKGNLKFPRKNFF 120

Query: 141 LLWMVESFNGNE-GKLDHSFNEDNQPVFSL------------------------------ 200
           +LWM+ES NG+  G    + + DNQPV SL                              
Sbjct: 121 ILWMIESLNGDRYGISRRNLSGDNQPVGSLRCNLMLGNQAISGVVRRGSYANRSEQNRSL 180

Query: 201 -PSDTDTSERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLF 253
                + +ER     +  LD   H   KF LV+IFLL+V F IPGSA+ILLLY L+T++F
Sbjct: 181 DTGGRNNAERHHFSLHKSLDFFIHFTSKFPLVIIFLLVVFFAIPGSAVILLLYFLVTVVF 240

[Close]

BLAST of ClCG01G010710 vs. TAIR10
Match: AT1G69330.1 (AT1G69330.1 RING/U-box superfamily protein)

HSP 1 Score: 249.2 bits (635), Expect = 2.7e-66
Identity = 135/269 (50.19%), Postives = 163/269 (60.59%), Query Frame = 1


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MW  ASN I  +  KK+  +      +CSDD+V + S  +E LECPICWESFNIVENVPY
Sbjct: 1   MWGFASNVIGSMGLKKSPKDSAQASSQCSDDEVSNISRDEEGLECPICWESFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGH+LC+NCV GLQ +VL+L+++ IRIP F+SCPWC  LS R+VYKGNLKFP KNFF
Sbjct: 61  VLWCGHTLCQNCVFGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNFF 120

Query: 141 LLWMVESFNGNE---------GKL------------------DHSFNED--------NQP 200
           LLWMVES NG+          G L                  +HS N +        NQ 
Sbjct: 121 LLWMVESLNGDRTSHGDRTSHGSLVTDNQQSAPTPRCSMSLGNHSSNNNLVARPLLRNQS 180

Query: 201 VFSLPS-DTDTSERRRLF-FYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLL 253
              LP  D      R+LF F+  LD       KF  V+IFLLIV F IPGS +IL LY L
Sbjct: 181 TDLLPHHDHSNQPSRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSLIILALYFL 240

[Close]

BLAST of ClCG01G010710 vs. TAIR10
Match: AT3G29270.1 (AT3G29270.1 RING/U-box superfamily protein)

HSP 1 Score: 233.4 bits (594), Expect = 1.5e-61
Identity = 129/263 (49.05%), Postives = 163/263 (61.98%), Query Frame = 1


Query: 20  RMWKLASNAIAGIRSKKNSAECKPVFW--ECSDDDVCSESSGDEELECPICWESFNIVEN 79
           RMW LAS+ + G    KN    +PV    ECSDDDV S  S DE LECPICWESFNIVEN
Sbjct: 8   RMWNLASSYLTGNIGPKNDIR-RPVHAHAECSDDDVSSVGSKDEGLECPICWESFNIVEN 67

Query: 80  VPYVLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSK 139
           VPYVLWCGH++CKNC+LGLQ +++KL T  +++P+FISCPWC+ LS R+V++G L+FP K
Sbjct: 68  VPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRGTLRFPHK 127

Query: 140 NFFLLWMVESFNG----------NEGKLD----------HSFNEDNQPVFS-------LP 199
           N+F+LWMVE  NG           +G  D          H+ +  +QP  S       +P
Sbjct: 128 NYFVLWMVERMNGERRNSPGGAQTDGNNDHTRETPSPCLHNRHHRSQPEPSRSVNDHRIP 187

Query: 200 SDT-DTSERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFA 253
            D   TS R+ L F+        L  KF LVVIFLLI+++ IP SA IL +Y+L+TLL A
Sbjct: 188 RDNIQTSLRKSLVFF------VQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTLLLA 247

[Close]

BLAST of ClCG01G010710 vs. TAIR10
Match: AT1G74370.1 (AT1G74370.1 RING/U-box superfamily protein)

HSP 1 Score: 184.9 bits (468), Expect = 6.2e-47
Identity = 108/265 (40.75%), Postives = 146/265 (55.09%), Query Frame = 1


Query: 21  MWKLASNAIA-GIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVP 80
           MW LAS +I  G  SK   A  KP            +++ +E+LECPICWESFN+VENVP
Sbjct: 1   MWNLASKSIREGFISKGEEAATKPRRATLDRSGDGRKTTKEEKLECPICWESFNVVENVP 60

Query: 81  YVLWCGHSLCKNCVLGLQGS-VLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKN 140
           YVLWCGH++CK C+LGLQ + V+K +    ++P F++CPWC+ LSLR+V  G ++FPSKN
Sbjct: 61  YVLWCGHTICKYCLLGLQRAIVIKSSALPFQLPFFVACPWCNILSLRLVCNGTIRFPSKN 120

Query: 141 FFLLWMVESFNGNEGKLDHSFNEDNQPVFS---------------LPSDTDTSERR---- 200
           F+LLWMVES NG+  +       DN+ V S                  D    + R    
Sbjct: 121 FYLLWMVESMNGSRSEAP----SDNKRVASGQRDLRNRCDGVSNTALGDEGLLDNRSWWN 180

Query: 201 ---RLFF---------YNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLL 253
              R FF            +  + HL+ KF LVVIFLL+ ++ IP SA +L +Y  +T  
Sbjct: 181 GVTRGFFRTGRLHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAVLGVYFFVTFA 240

[Close]

BLAST of ClCG01G010710 vs. NCBI nr
Match: gi|659131481|ref|XP_008465708.1| (PREDICTED: uncharacterized protein LOC103503329 [Cucumis melo])

HSP 1 Score: 437.6 bits (1124), Expect = 1.5e-119
Identity = 212/232 (91.38%), Postives = 219/232 (94.40%), Query Frame = 1


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MWKLASNAIAGIRSKKNS   K VFWECSDD+VCSE+S DEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAIAGIRSKKNSDVPKQVFWECSDDEVCSEASRDEELECPICWESFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGHSLCKNCVLGLQGSVLKLATRQ+RIPI ISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLWCGHSLCKNCVLGLQGSVLKLATRQMRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTDTSERRRLFFYNHLDCLFHLIFKFLLV 200
           LLWMVESFNGNEGKLDHSFN DNQ VFSLPS T TSERRRLFFYNHLDC+ HL+FKFLL 
Sbjct: 121 LLWMVESFNGNEGKLDHSFNSDNQSVFSLPSGTVTSERRRLFFYNHLDCVIHLVFKFLLT 180

Query: 201 VIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNGITS 253
           VIF+LIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHAL+KLMN ITS
Sbjct: 181 VIFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALDKLMNDITS 232

[Close]

BLAST of ClCG01G010710 vs. NCBI nr
Match: gi|778703011|ref|XP_011655300.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101218619 [Cucumis sativus])

HSP 1 Score: 424.1 bits (1089), Expect = 1.7e-115
Identity = 210/236 (88.98%), Postives = 216/236 (91.53%), Query Frame = 1


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MWKLASNAIAGIRSKKNS   K VFWECSDD+ CSE+S DEELECPICWESFNIVENVPY
Sbjct: 1   MWKLASNAIAGIRSKKNSDVSKQVFWECSDDEACSEASRDEELECPICWESFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VL CGHSLCKNCVLGLQGSVLKLATRQIRIPI ISCPWCHQLSLRVVYKGNLKFPSKNFF
Sbjct: 61  VLXCGHSLCKNCVLGLQGSVLKLATRQIRIPIVISCPWCHQLSLRVVYKGNLKFPSKNFF 120

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFSLPSDTD----TSERRRLFFYNHLDCLFHLIFK 200
           LLWMVESFNGNEGKLDHSFN DN P+FSLPS T     TSERRRLFFYNHLD + HLIFK
Sbjct: 121 LLWMVESFNGNEGKLDHSFNSDNHPLFSLPSGTGTGTVTSERRRLFFYNHLDFVVHLIFK 180

Query: 201 FLLVVIFLLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLALHALEKLMNGITS 253
           FLL+VIF+LIVVFVIPGSALILLLYLLITLLFALPSLLIFYLA HALEKLMN ITS
Sbjct: 181 FLLLVIFVLIVVFVIPGSALILLLYLLITLLFALPSLLIFYLAFHALEKLMNDITS 236

[Close]

BLAST of ClCG01G010710 vs. NCBI nr
Match: gi|593788762|ref|XP_007157420.1| (hypothetical protein PHAVU_002G068700g [Phaseolus vulgaris])

HSP 1 Score: 280.8 bits (717), Expect = 2.4e-72
Identity = 143/261 (54.79%), Postives = 173/261 (66.28%), Query Frame = 1


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MW  ASNA+  IR+K+++ +      ECSDD+VCS SS DE LECPICWESFNIVENVPY
Sbjct: 1   MWSFASNALTSIRTKRSTKQLSETNAECSDDEVCSNSSRDEGLECPICWESFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGH+LCKNCVLGLQ +VL   T+QIRIP FISCPWCH LS R++YKGNLK+P KNFF
Sbjct: 61  VLWCGHTLCKNCVLGLQWAVLNFPTQQIRIPFFISCPWCHLLSFRIIYKGNLKYPCKNFF 120

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFS-----LPSDTDTSERRRL-------------- 200
           LLWMVES NG   KL  S   D QP++S     L S   T   RR               
Sbjct: 121 LLWMVESLNGERHKLVSSCG-DTQPIWSPKCNLLGSQVSTCNLRRASMSPYSRQVGSNRD 180

Query: 201 --------FFYNH--LDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALP 253
                   +F  H  LD   H   KF L+VIFLLI +F +PGSA+IL+LYLL+T++FA+P
Sbjct: 181 VGVSGEAHYFSLHKSLDFFLHFTSKFPLIVIFLLIALFAVPGSAVILILYLLVTIIFAIP 240

[Close]

BLAST of ClCG01G010710 vs. NCBI nr
Match: gi|1012354587|gb|KYP65774.1| (hypothetical protein KK1_012038 [Cajanus cajan])

HSP 1 Score: 276.9 bits (707), Expect = 3.4e-71
Identity = 144/262 (54.96%), Postives = 175/262 (66.79%), Query Frame = 1


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MW+ ASNA+  IR K++S E      +CSDD+VCS +S DE LECPICWESFNIVENVPY
Sbjct: 1   MWRFASNALTCIRKKRSSKEPSHDNADCSDDEVCSNASRDEGLECPICWESFNIVENVPY 60

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGH+LCKNCVLGLQ +V+K  T+QI+IP FISCPWCH LSLR +YKGNLK+P KNFF
Sbjct: 61  VLWCGHTLCKNCVLGLQWAVVKFPTQQIKIPFFISCPWCHLLSLRFIYKGNLKYPCKNFF 120

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFS--------------------------LPSDTD 200
           LLWMVES NG+  KL  +  E NQP++S                          L S+ D
Sbjct: 121 LLWMVESLNGDRHKLVSTCAE-NQPIWSPKCNLLGSQVTNCNLRRASISHCSGQLGSNRD 180

Query: 201 T----SERRRLFFYNHLDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFAL 253
                 E R       LD  FHL  KF LV+IFLLI +F IP SA+IL+LYLL+T+LFA+
Sbjct: 181 VGVSDGETRYFNLLKSLDFFFHLTAKFPLVIIFLLIALFAIPCSAVILVLYLLVTILFAI 240

[Close]

BLAST of ClCG01G010710 vs. NCBI nr
Match: gi|920702657|gb|KOM45882.1| (hypothetical protein LR48_Vigan06g118800 [Vigna angularis])

HSP 1 Score: 273.5 bits (698), Expect = 3.8e-70
Identity = 140/261 (53.64%), Postives = 172/261 (65.90%), Query Frame = 1


Query: 21  MWKLASNAIAGIRSKKNSAECKPVFWECSDDDVCSESSGDEELECPICWESFNIVENVPY 80
           MW  ASNA+  +R+K+ S +      ECSDD+VCS SS DE LECPICWESFNIVENVPY
Sbjct: 2   MWSFASNALTSLRTKRCSKQFSETNAECSDDEVCSNSSRDEGLECPICWESFNIVENVPY 61

Query: 81  VLWCGHSLCKNCVLGLQGSVLKLATRQIRIPIFISCPWCHQLSLRVVYKGNLKFPSKNFF 140
           VLWCGH+LCKNCVLGLQ +V+   T+QIRIP FISCPWCH LS R++Y GNLK+P KNFF
Sbjct: 62  VLWCGHTLCKNCVLGLQWAVVNFPTQQIRIPFFISCPWCHLLSFRIIYNGNLKYPCKNFF 121

Query: 141 LLWMVESFNGNEGKLDHSFNEDNQPVFS-----LPSDTDTSERRRL-------------- 200
           LLWMVES NG+  KL  S + D QP++S     L S   T  +RR               
Sbjct: 122 LLWMVESLNGDRHKLVSS-SGDTQPIWSPKCNLLGSQVSTCNQRRASMSPYSRQVGSDRH 181

Query: 201 --------FFYNH--LDCLFHLIFKFLLVVIFLLIVVFVIPGSALILLLYLLITLLFALP 253
                   +F  H  LD       KF L+VIFLLI +F +PGS +IL+LYLL+T+LFA+P
Sbjct: 182 VGASGDTHYFSLHKSLDFFLRFTSKFPLIVIFLLIALFAVPGSVVILILYLLLTILFAVP 241

The following BLAST results are available for this feature:

BLAST of ClCG01G010710 vs. TrEMBL


Match Name	E-value	Identity	Description
V7CH03_PHAVU	1.6e-72	54.79	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G068700g PE=4 SV=1	[more]
A0A151TFE0_CAJCA	2.4e-71	54.96	Uncharacterized protein OS=Cajanus cajan GN=KK1_012038 PE=4 SV=1	[more]
A0A0S3T1L8_PHAAN	2.6e-70	53.64	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.10G048700 PE=...	[more]
A0A0L9UTG9_PHAAN	2.6e-70	53.64	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan06g118800 PE=4 SV=1	[more]
A0A0D2RKN8_GOSRA	3.4e-70	52.65	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G144000 PE=4 SV=1	[more]

BLAST of ClCG01G010710 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G69330.1	2.7e-66	50.19	RING/U-box superfamily protein	[more]
AT3G29270.1	1.5e-61	49.05	RING/U-box superfamily protein	[more]
AT1G74370.1	6.2e-47	40.75	RING/U-box superfamily protein	[more]

BLAST of ClCG01G010710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131481\|ref\|XP_008465708.1\|	1.5e-119	91.38	PREDICTED: uncharacterized protein LOC103503329 [Cucumis melo]	[more]
gi\|778703011\|ref\|XP_011655300.1\|	1.7e-115	88.98	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101218619 [Cucumis sa...	[more]
gi\|593788762\|ref\|XP_007157420.1\|	2.4e-72	54.79	hypothetical protein PHAVU_002G068700g [Phaseolus vulgaris]	[more]
gi\|1012354587\|gb\|KYP65774.1\|	3.4e-71	54.96	hypothetical protein KK1_012038 [Cajanus cajan]	[more]
gi\|920702657\|gb\|KOM45882.1\|	3.8e-70	53.64	hypothetical protein LR48_Vigan06g118800 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD
IPR017907	Znf_RING_CS
IPR027370	Znf-RING_LisH

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G010710.1	ClCG01G010710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 65..120 score: 9
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 60..121 score: 8.3
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 84..93 scor
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 65..116 score: 4.
None	No IPR available	PANTHER	PTHR13139	RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN	coord: 37..252 score: 4.3
None	No IPR available	PANTHER	PTHR13139:SF47	SUBFAMILY NOT NAMED	coord: 37..252 score: 4.3
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 60..122 score: 3.89

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G010710	Cucurbita moschata (Rifu)	cmowcgB173
ClCG01G010710	Cucurbita moschata (Rifu)	cmowcgB345
ClCG01G010710	Wild cucumber (PI 183967)	cpiwcgB025
ClCG01G010710	Cucumber (Chinese Long) v2	cuwcgB022
ClCG01G010710	Melon (DHL92) v3.5.1	mewcgB142
ClCG01G010710	Watermelon (97103) v1	wcgwmB146
ClCG01G010710	Cucurbita pepo (Zucchini)	cpewcgB030
ClCG01G010710	Cucurbita pepo (Zucchini)	cpewcgB457
ClCG01G010710	Bottle gourd (USVL1VR-Ls)	lsiwcgB169
ClCG01G010710	Cucumber (Gy14) v2	cgybwcgB021
ClCG01G010710	Melon (DHL92) v3.6.1	medwcgB126
ClCG01G010710	Silver-seed gourd	carwcgB0053
ClCG01G010710	Silver-seed gourd	carwcgB1011
ClCG01G010710	Cucumber (Chinese Long) v3	cucwcgB024
ClCG01G010710	Cucumber (Chinese Long) v3	cucwcgB534
ClCG01G010710	Watermelon (97103) v2	wcgwmbB089
ClCG01G010710	Wax gourd	wcgwgoB241
ClCG01G010710	Cucumber (Gy14) v1	cgywcgB321
ClCG01G010710	Cucurbita maxima (Rimu)	cmawcgB182
ClCG01G010710	Cucurbita maxima (Rimu)	cmawcgB341