ClCG01G010360 (gene) Watermelon (Charleston Gray)

NameClCG01G010360
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionUnknown protein
LocationCG_Chr01 : 15679461 .. 15679822 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATATTCAAATAACATGTGTATCTTCTATAAATGCCCCCCCATTCTTTCCACTTCCTTCACCAAATCTTGCACACATCCATTGGCTAATACATATTGGTTTATAATGAAATCTCTTTCACATCCTTTCTTCATGGTTCTTCTCCTTTCGGCAATGGCAGCCACCATTGGCAGTGCCACCACCTCTGTCCCGACCTTCGCTCCGACCCCAAGTTCAAAGACGTGAAGGATCCACACATTGAAGATATTGGAAAGTGGGCAATGGAGGAGTACAAGAAACAACACCATATAAAATCCATATTCGAATTCAAGGATGTGGTAAGTGGAGAAAGCGCAGTGGTTACTGGAATTATTAAGTAG

mRNA sequence

ATGAGATATTCAAATAACATCCACCATTGGCAGTGCCACCACCTCTGTCCCGACCTTCGCTCCGACCCCAAGTTCAAAGACGTGAAGGATCCACACATTGAAGATATTGGAAAGTGGGCAATGGAGGAGTACAAGAAACAACACCATATAAAATCCATATTCGAATTCAAGGATGTGGTAAGTGGAGAAAGCGCAGTGGTTACTGGAATTATTAAGTAG

Coding sequence (CDS)

ATGAGATATTCAAATAACATCCACCATTGGCAGTGCCACCACCTCTGTCCCGACCTTCGCTCCGACCCCAAGTTCAAAGACGTGAAGGATCCACACATTGAAGATATTGGAAAGTGGGCAATGGAGGAGTACAAGAAACAACACCATATAAAATCCATATTCGAATTCAAGGATGTGGTAAGTGGAGAAAGCGCAGTGGTTACTGGAATTATTAAGTAG

Protein sequence

MRYSNNIHHWQCHHLCPDLRSDPKFKDVKDPHIEDIGKWAMEEYKKQHHIKSIFEFKDVVSGESAVVTGIIK
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR020381Proteinase inhibitor I25, cystatin, conserved region
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010466 negative regulation of peptidase activity
cellular_component GO:0005575 cellular_component
molecular_function GO:0030414 peptidase inhibitor activity
molecular_function GO:0004869 cysteine-type endopeptidase inhibitor activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G010360.1ClCG01G010360.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020381Proteinase inhibitor I25, cystatin, conserved regionPFAMPF16845SQAPIcoord: 26..70
score: 4.
NoneNo IPR availableGENE3DG3DSA:3.10.450.10coord: 27..70
score: 3.
NoneNo IPR availableunknownSSF54403Cystatin/monellincoord: 29..70
score: 1.0

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG01G010360Lsi02G011120Bottle gourd (USVL1VR-Ls)lsiwcgB169
The following gene(s) are paralogous to this gene:

None