ClCG01G010070 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G010070
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	30S ribosomal protein S14, putative
Location	CG_Chr01 : 14853287 .. 14858936 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAAACACTCTGCCAAAAGTCCAAAAAGTTCGTCGGAGAAGATGAAGTCAGTGCCGGAAAGTCCTCATCCAAGAGGATCCAACCAGATCAATGTGAAACTGAACCCAAAAAAGATGATAGAAGTTGAGCATTTAATGAAGAAAAGTGCTGGCGACTGTTCGGCTCCTAAGGAAAGAGTCGATTCCCGACACACTATTAATGAAGAAGATGGAAAAATTAAGGCTGCGCCGAAATCTTGCAGTCCATGTGGGTCCATTACCCCAAACTTATTCAATGAAAAACCAAGGGAGGAGTCAGCAAATGTGCATTTACTGATGAAACAAAGTGCAGACGACCGGTCGGTTCCCAGTGACCCCTTCGAATTCCAGCCGCCAAATACAAATCCAGGGTCGGATCCCAAGGACCTTTTTGAATTCCCGCCGCATAATTCAAATCAATCCTATGAAGGAAAAGGCCATATCGCTGAAGGAGGAAGACAAACAGTCACCAACACCAACCATTGCGAATTTATTACGGAGTTAAATCACATTTCACGAGATCTGGAGAACTCCTCTTCCAATAATGACATTCCAGCAGTCGGTCTTTCTCCCTCCAAAATTCATAGAATCAAGAAACTCGAAGAAGTTATTGGTCGAAAAGCCAGCATACCCTTGGAAGATAAAACGTCAAACCCCAAAGGAAAGAGGAAGTTGTTCAGACCTTATCCTAAACACTACATTCGGAAGAAAACCACCTTCATCAACTCGTGGACAGCCATTGCAAACTCAGATATATTCGAAGAATGCTGTGTTAGAATTCAAATCCCGAGCAACAGCCATATCAGGTCGGAAAATCCTCATCTTAATAGTCACTCCTTCTCTCAATCAAAGTTCAATATTCCCGGCTCTAATGTGTTTATTCGAGGAACCCCTTGCCGCAAGCCTGATTCCGATCAACACATCATTCAAGATGAAGATGGAGACTCGTTAATCAGTGTAAGCAGTGAAGATTTAGAAGTGTCTGACTTAGAAGATGCTTCGGAAGGGGTTGTCTTGTGGCCAACTAGTGAAGATGATCTGAAGAAACTTTTTCAGTCAGAGGAGGGGTCTATCCACAACAAAGTTGAAAAGACCTTATTCAAACAAATTGAGCAGCAGTCCATCTCCAAGCACCTACAACCATTAATACATGATTGCGACTTGATATTCGGATCATAAGCCCCCCTTGTCTCAATGAAGATACTGTCGTGGAATACTAGAGGATTGGGAGACAAAACTAAAAGGATGGTAGTAAAGCGAACGATTAAAAGACTAAATCCAGATATAGTCTTATTACAAGAATCTAAAAAGGATAGCATTGACTTGGCCCTTGTAAAAGAGCTTTGGAGCTCTAAAGATATTGGATGGACCTTTGTTGAAGCCTTTGGCAGATCCGGCGGAATTTTAACATCGTGGGACGAAAGCGAGATCTCGATCATTGAAGTTCTAAAGGGTGGTTACTCTCTTTCGGTTAAGTGCTTAACTATTAATAAAAAAAGTGGATGGGTAACAAATGTCTATGGGCCTAACGAATATAGAGAACGGAAACATCTATGGGCAGAATTACACTCTTTGGCAGCCTATTGCACTGATGCTTGGTGCATTGGAGGAGATTTCAATGTTACAAGGAGGATTCAAGAAAGACTCCCTCAAGGAAGAATCACAAGAGGAAAGAAGAAGTTCAACAATTTCATCTCTTCTACACAACTTATGGAACTTCCTCTACACAATGGCAGGTATACTTGGACCCGAGAAGGCAATGTCTCTTCAAGATCCCTCCTAGACCGATTTCTAATTTCAAGTGAATGGGATGAGCTCTTTGCTAACTCAAGAGTCACAAGACAATTGTGCATCCTCTCAGATCATTTCCCTATATTATTAGAAGCTGGATCCTTTGAATGGGGTCCCCCTCTATTTAGATTCTATAACAGTTGGCTTGAGATACAAGATTGCTGTCAAGTCATCAAAAATGCACTAGATTCAGACAATCATCATAGCTGGGCAGGATTTGTTCTGACTACTAAACTTAGAAAGGTCAAATCAGCAATAAAGGCATGGAATTCAATCTTTGAAAAAGAAAGAAAGAAATCTGAGGAGGCCCTAATAGTTGAAATTGAGAAGTGAGACCTATTATTAGAAAATTCGGAGGAAGGAGTAGACAATGTCCTTTGCCTAACCTTGAAGGCTAATCTCTTGGCACTTTACCGAATAGAGGAGAGGAATCTAATGCAGAAAAGTAAGTTGAATTGGCTAAGTTTGGGGGACGAGAATTCAAAATTCTTCCACCGATTCTTATCAGCTAAAAAAAGAAGAAATCTGATTTCAAAATTGAAAAATGATCAAGGGGAAGTTACCACCTCTTATAAAGACATTGAAGACTTAATCTTGAAATTTTACAGCTCACTTTACACGAAAATTCCAGGTGAAAGAGCTTTCCCCTTGCATTTACATTGGGCTGAAATCAATGATTCTCAAAATAGAATGCTGGTTGCTCGTTTTACTATGGAAGAAGTGAAAAACACGTTGAATCTGATGGGAAAAAATAAAGCTCCGGGGCCGGATGGTTTCACAGTAGAATTTTTTCTGAAATTTTGGGAGAATTTGAAGGATAATATCATGAAAATATTCGAGGAATTCTTTGAAAATGGAAAATTAAATTCCTGTATCAAGGAAAACTTCATTTGCTTGATCCAAAAGAAGGAAGATGTTGTTTTAGTAAAAGATTTCAGACCACTCAGCCTAACAACGTTAATGTATAAGCTGGTAGCTAAGGTGCTAGCAGAAAGATTAAGAAAGGTCATGCCAAGCATTATTGCTCCTACTCAAAGTGCATTCATTGGGGAGTGCCAAATTCTTGATCCCGTTCTTATTGCTAATGAAGTGGTAGAATATTACAAATCCAAAAAGAAAAAGGGATGGCTGCTGAAACTTGATCTTGAAAAAGCCTTTGATTGGGTAGATTGGTCATTTCTTGAGAAAGTTCTAATTGGAAAGAAGTTTCATTCTAAATGGATATTGTGGATTATGGGTTGTGTATCCAACCCAAAGTTCTCAATATTCATCAACGGAAAGACCAAGAGGGAGAATCCAAGCTTCTAGAGGAATTAGACAAGGTGACCCTCTCTCTCCATTTCTCTTCCTTCTAATCAGTGAAGTACTTAATGGCTTGATGTCAAGATTGTATGAAAAAGGAAAGTTTGAAGGTTTTGTGGTCGGAAAAGATGCTGTCCATGTATCATTACTCCAGTTTGCAGATGATACTCTAATATTTTGTAAGTATGATGATGACATGCTACAAAATCTGAGGAAAATGATTGATATCTTTGAGTGGTGCTCGGGACAGAAAATTAATTGGGAGAAATCTGCTCTTTGCAGAATCAATATTGATGATATTAAGCTATCCCAAGCGGCAACCAGCCTAAATTGCAAGGTTGACTACCTTCCCATTTCTTATCTTGGATTACCTCTTGGAGGATATCCCAAAAAAGAAATTTTTTGGCAGCCGGTACTTAGGAAAATAAAAGATAAATTGGAGAGATGGAAGAGATTTAACTTGTCACGAGGAAGGCGAGTAACCCTTTACAAAACAGTCCTCTCTCATCTACCTACATACTATATGTCTTTATTCTTAAAGCCGGAAAAGGTGATTTTGAATATTGAGAAAGCAATGAGGAAATTCTTTTGGGAAGGTCATAAAGGGGGGAAGTTGAATCACCTAGTTAAATGGGAGGTGACTTCTAGAAGGCAAGAGGATGGGGGCTTTGGTATTGGGGGCTTACAGGTGAAGAATAAAGCACTCTTGGCCAAGTGGGGTTGGCGTTTTATGAAGGAAGAGAACTCCCTTTGGAGTCAAGTCATCCGAAGTATCCATGGAAGTAACTTGTTCGGATGGCACACTAGTGGAGTTGTCAGTTGTAGTCTTAGAAGCCCGTGGATTAATATCTCAAGATGCTGGCAAAAGGTTGATGAACTGGCTGGTTTCAAGGTGGGGGATGGAAGGAAAGTGGCATTCTGGGTTGACTCTTGGGTGGGCAATTCTACATTTAGTATCTCTTTTCCAAGACTCTACAGAATCTCCTTGAATCCAAAGGGTGGGGTAGCTGATTTTTGGGATTCCACACACTCTTCTTGGTCCATTACCTTCAGATAGGCTCTTAAAGAAGAGGAGCTAGAAGACTTCCAAACCCTCCTTGGTATACTTTCAGCAGTAACCATCACCATAAGTAAGGATAATCGTATTTGGAAGCTAGAAGATAATGGAAACTTTTCGGTTAAATCCCTTGTGAAACATCTACCCAAATCCCACCCCATTGGAAAACTTTTGGAAGACTATCTGGAAATCCAAAAGTCCTAGGAGGGTCAATATCATCATTTGGATTATGCTTGAAGGACTTTTGAATTATGCCTCAGTGTTGCAATAAAAGCTACCATCCCATTATCTCTGCCCACACGTTTGCCCCCTTTGTTTGGTAGACCATGAAGATTTACAGCATTTATTCTTCAACTGTATATATGCAAGAAGTTGCTGGTTTAAGCTGTTTGAAGACTTCAATCTAAGTTGGGTGTTCGATAAAATGTTTAAAGAAAATGTGCTACAACTATTGATTGGTCCTAAGCTGAAATCTAGACCAAATATGATTTGGTCCAATGCGGTTAAGGCTCTACTTGCTGAAATTTGGTTCGAAAGAAATCAAAGGGTGTTCCATGATAAAGCTTCCCCATGGTTGATGAGATTTGAGACAACCAAATTAAATGCTTCATCATGGTGCCTTCTATCCAAGAAATTTGAAGATTTCTCCATTCAAGATTTGAGCATCAATTGGAAACCATTTATTTTTCCCAATGTTTAGCAACCTGTTATTTATTTCAAAATGATCTGTTATTGCTGGATTTAATTGTATTGTTTTAGATTGTGCTACCCACTTGTATAGGACATGATGAGAGTGCTAAGGGGGTGTCAACCTAGTTGAGATGTCCGGGTGCACTCGCTGATCCTTTGGCCTTTGTTTTTGTATCCATTACCATATTGTATGTCTCATTTCATAATCTTAATGAAGAGACTTGTTTCTTTTTCAAAAAAAATTATAAGAAACCAAACTTTTATTGAGAAAAATGAAAGAATGTACAAAGGCAAACAAAAAATATATAAAAGAACAACAAAAAATCAATGAAATGAGCCCCAACACTAACTACAAGGACAAACCCCATCCAAAAGAATGAGACCAAGCTAGTAAGTACAAAATGCCAAGTATTCTTTAGTCGATTTCGTTCTCTTCCATCGCCCTCAATTCCCTAGTCTACTCAAAAGTAGCCAGCCATTGCAGAGGATTTCAAAGCTTGAAGGTCAAACGAAATGTCGGAGGACAAGCGAAACATTCTTGACAATTATCACCAACAGCTTGCTGCGAAGTTTGAGTTTAAGCGGAAGCTTTACAAAGCCATTTGCAATGATCCAAGTCTTCCCAACGATGTGCGTGAGGAGCATCGTTATAAGCTATCAAAATTACCAAGAAATAGTTTGTTCACTCGACTGAGGAATCGCTGCATTTTCACCGAACCTAGGGCTGTCTACCAGCTTTTCCATGTTTCTCGTATTGTTTTCCGTGATTGGCATCCAAAGGTCTTATAA

mRNA sequence

ATGAAAAAACACTCTGCCAAAAGTCCAAAAAGTTCGTCGGAGAAGATGAAGTCAGTGCCGGAAAGTCCTCATCCAAGAGGATCCAACCAGATCAATGTGAAACTGAACCCAAAAAAGATGATAGAAGTTGAGCATTTAATGAAGAAAAGTGCTGGCGACTGTTCGGCTCCTAAGGAAAGAGTCGATTCCCGACACACTATTAATGAAGAAGATGGAAAAATTAAGGCTGCGCCGAAATCTTGCAGTCCATGTGGGTCCATTACCCCAAACTTATTCAATGAAAAACCAAGGGAGGAGTCAGCAAATGTGCATTTACTGATGAAACAAAGTGCAGACGACCGGTCGGTTCCCAGTGACCCCTTCGAATTCCAGCCGCCAAATACAAATCCAGGGTCGGATCCCAAGGACCTTTTTGAATTCCCGCCGCATAATTCAAATCAATCCTATGAAGGAAAAGGCCATATCGCTGAAGGAGGAAGACAAACAGTCACCAACACCAACCATTGCGAATTTATTACGGAGTTAAATCACATTTCACGAGATCTGGAGAACTCCTCTTCCAATAATGACATTCCAGCACTTGCTGCGAAGTTTGAGTTTAAGCGGAAGCTTTACAAAGCCATTTGCAATGATCCAAGTCTTCCCAACGATGTGCGTGAGGAGCATCGTTATAAGCTATCAAAATTACCAAGAAATAGTTTGTTCACTCGACTGAGGAATCGCTGCATTTTCACCGAACCTAGGGCTGTCTACCAGCTTTTCCATGTTTCTCGTATTGTTTTCCGTGATTGGCATCCAAAGGTCTTATAA

Coding sequence (CDS)

ATGAAAAAACACTCTGCCAAAAGTCCAAAAAGTTCGTCGGAGAAGATGAAGTCAGTGCCGGAAAGTCCTCATCCAAGAGGATCCAACCAGATCAATGTGAAACTGAACCCAAAAAAGATGATAGAAGTTGAGCATTTAATGAAGAAAAGTGCTGGCGACTGTTCGGCTCCTAAGGAAAGAGTCGATTCCCGACACACTATTAATGAAGAAGATGGAAAAATTAAGGCTGCGCCGAAATCTTGCAGTCCATGTGGGTCCATTACCCCAAACTTATTCAATGAAAAACCAAGGGAGGAGTCAGCAAATGTGCATTTACTGATGAAACAAAGTGCAGACGACCGGTCGGTTCCCAGTGACCCCTTCGAATTCCAGCCGCCAAATACAAATCCAGGGTCGGATCCCAAGGACCTTTTTGAATTCCCGCCGCATAATTCAAATCAATCCTATGAAGGAAAAGGCCATATCGCTGAAGGAGGAAGACAAACAGTCACCAACACCAACCATTGCGAATTTATTACGGAGTTAAATCACATTTCACGAGATCTGGAGAACTCCTCTTCCAATAATGACATTCCAGCACTTGCTGCGAAGTTTGAGTTTAAGCGGAAGCTTTACAAAGCCATTTGCAATGATCCAAGTCTTCCCAACGATGTGCGTGAGGAGCATCGTTATAAGCTATCAAAATTACCAAGAAATAGTTTGTTCACTCGACTGAGGAATCGCTGCATTTTCACCGAACCTAGGGCTGTCTACCAGCTTTTCCATGTTTCTCGTATTGTTTTCCGTGATTGGCATCCAAAGGTCTTATAA

Protein sequence

MKKHSAKSPKSSSEKMKSVPESPHPRGSNQINVKLNPKKMIEVEHLMKKSAGDCSAPKERVDSRHTINEEDGKIKAAPKSCSPCGSITPNLFNEKPREESANVHLLMKQSADDRSVPSDPFEFQPPNTNPGSDPKDLFEFPPHNSNQSYEGKGHIAEGGRQTVTNTNHCEFITELNHISRDLENSSSNNDIPALAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNRCIFTEPRAVYQLFHVSRIVFRDWHPKVL

Homology

[Close]

BLAST of ClCG01G010070 vs. Swiss-Prot
Match: RT14_OENBE (Ribosomal protein S14, mitochondrial OS=Oenothera berteroana GN=RPS14 PE=3 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 3.1e-22
Identity = 49/70 (70.00%), Postives = 58/70 (82.86%), Query Frame = 1


Query: 194 LAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNRCIFT-EPRAVYQ 253
           LA K+E +RKLYKA CNDP+LP+D+R++HRYKLSKLPRNS F R+RNRCI T  PR+VY+
Sbjct: 14  LATKYELRRKLYKAFCNDPALPSDMRDKHRYKLSKLPRNSSFARVRNRCISTGRPRSVYE 73

Query: 254 LFHVSRIVFR 263
            F +SRIVFR
Sbjct: 74  FFRISRIVFR 83

[Close]

BLAST of ClCG01G010070 vs. Swiss-Prot
Match: RT14_BRANA (Ribosomal protein S14, mitochondrial OS=Brassica napus GN=RPS14 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.7e-20
Identity = 48/70 (68.57%), Postives = 55/70 (78.57%), Query Frame = 1


Query: 194 LAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNRCIFT-EPRAVYQ 253
           LAAKFE +RKLYKA C DP LP+D+R++HRYKLSKLPRNS F R+RNRCI T  PR+V +
Sbjct: 15  LAAKFELRRKLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNRCISTGRPRSVSE 74

Query: 254 LFHVSRIVFR 263
            F + RIVFR
Sbjct: 75  FFRIYRIVFR 84

[Close]

BLAST of ClCG01G010070 vs. Swiss-Prot
Match: RT14_VICFA (Ribosomal protein S14, mitochondrial OS=Vicia faba GN=RPS14 PE=3 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 3.8e-20
Identity = 48/70 (68.57%), Postives = 56/70 (80.00%), Query Frame = 1


Query: 194 LAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNRCIFT-EPRAVYQ 253
           LAAK+E +RKLYKA C D  LP+D+R++ RYKLSKLPRNS F R+RNRCI T  PR+VY+
Sbjct: 15  LAAKYELRRKLYKAFCKDSDLPSDMRDKLRYKLSKLPRNSSFARVRNRCISTGRPRSVYE 74

Query: 254 LFHVSRIVFR 263
           LF +SRIVFR
Sbjct: 75  LFRISRIVFR 84

[Close]

BLAST of ClCG01G010070 vs. Swiss-Prot
Match: RT14_MARPO (Ribosomal protein S14, mitochondrial OS=Marchantia polymorpha GN=RPS14 PE=3 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 9.4e-19
Identity = 47/71 (66.20%), Postives = 55/71 (77.46%), Query Frame = 1


Query: 194 LAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNRCIFT-EPRAVYQ 253
           L AK+E KR  YKAIC D +LPN +R E+ +KLSKLPRNS  TR+RNRCIFT  PR+VY+
Sbjct: 14  LVAKYELKRMHYKAICQDRNLPNKIRYEYFFKLSKLPRNSSKTRVRNRCIFTGRPRSVYK 73

Query: 254 LFHVSRIVFRD 264
           LF +SRIVFR+
Sbjct: 74  LFRISRIVFRE 84

[Close]

BLAST of ClCG01G010070 vs. Swiss-Prot
Match: RS14_CAUCR (30S ribosomal protein S14 OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=rpsN PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 9.4e-11
Identity = 38/77 (49.35%), Postives = 45/77 (58.44%), Query Frame = 1


Query: 188 NNDIPALAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNRCIFT-E 247
           N  + AL  KF  KR   KAI ND +LP + R E R KL+KLPRNS   R+RNRC  T  
Sbjct: 10  NEAVKALVKKFAEKRAALKAIANDETLPLEERFEARLKLAKLPRNSAAIRIRNRCEVTGR 69

Query: 248 PRAVYQLFHVSRIVFRD 264
           PRA Y+   +SR+  R+
Sbjct: 70  PRAYYRKLKMSRVALRE 86

[Close]

BLAST of ClCG01G010070 vs. TrEMBL
Match: A0A0A0LSR8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G386130 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23
Identity = 60/77 (77.92%), Postives = 64/77 (83.12%), Query Frame = 1


Query: 194 LAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNRCIFT-EPRAVYQ 253
           LAAKFE KR L+KAICNDPSLP D+REEHR KLSKLPRNS FTRLRNRCIFT  PR VYQ
Sbjct: 16  LAAKFELKRNLFKAICNDPSLPKDIREEHRNKLSKLPRNSSFTRLRNRCIFTGRPRGVYQ 75

Query: 254 LFHVSRIVFRDWHPKVL 270
           LF +SRIVFR+   K L
Sbjct: 76  LFRMSRIVFRELAKKGL 92

[Close]

BLAST of ClCG01G010070 vs. TrEMBL
Match: A0A0M5L7R7_9MAGN (Ribosomal protein S14 OS=Heuchera parviflora var. saurensis GN=rps14 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.1e-21
Identity = 50/70 (71.43%), Postives = 60/70 (85.71%), Query Frame = 1


Query: 194 LAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNRCIFT-EPRAVYQ 253
           LAAK+E +RKLYKA C DP LP+D+R++HRYKLSKLPRNS F R+RNRCIFT  PR+VY+
Sbjct: 35  LAAKYELRRKLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNRCIFTGRPRSVYE 94

Query: 254 LFHVSRIVFR 263
            F +SRIVFR
Sbjct: 95  FFRISRIVFR 104

[Close]

BLAST of ClCG01G010070 vs. TrEMBL
Match: V9VFW3_AMBTC (Ribosomal protein S14 OS=Amborella trichopoda GN=rps14 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.1e-21
Identity = 50/70 (71.43%), Postives = 60/70 (85.71%), Query Frame = 1


Query: 194 LAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNRCIFT-EPRAVYQ 253
           LAAK+E +RKLYKA C DP LP+D+R++HRYKLSKLPRNS F R+RNRCIFT  PR+VY+
Sbjct: 15  LAAKYELRRKLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNRCIFTGRPRSVYE 74

Query: 254 LFHVSRIVFR 263
            F +SRIVFR
Sbjct: 75  FFRISRIVFR 84

[Close]

BLAST of ClCG01G010070 vs. TrEMBL
Match: Q0QG47_JUNEF (Ribosomal protein S14 OS=Juncus effusus PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.6e-20
Identity = 49/70 (70.00%), Postives = 61/70 (87.14%), Query Frame = 1


Query: 194 LAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNRCIFT-EPRAVYQ 253
           LAAK+E +RKLYKA+C DP LP+D+R++HRYKLSKLPRNS F R+RNRCI+T  PR+VY+
Sbjct: 15  LAAKYELRRKLYKALCQDPDLPSDMRDKHRYKLSKLPRNSSFLRVRNRCIYTGRPRSVYE 74

Query: 254 LFHVSRIVFR 263
            F +SRIVFR
Sbjct: 75  FFRISRIVFR 84

[Close]

BLAST of ClCG01G010070 vs. TrEMBL
Match: A0A0J8CR24_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g051900 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.6e-20
Identity = 51/71 (71.83%), Postives = 60/71 (84.51%), Query Frame = 1


Query: 194 LAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNRCIFT-EPRAVYQ 253
           LAAK+E +RKLYKA+C DP LP  ++E+HRYKLSKLPRNS F RLRNRCIFT  PRAVY+
Sbjct: 59  LAAKYELRRKLYKALCRDPELPPSMKEKHRYKLSKLPRNSAFNRLRNRCIFTGRPRAVYE 118

Query: 254 LFHVSRIVFRD 264
            F +SRIVFR+
Sbjct: 119 KFRMSRIVFRE 129

[Close]

BLAST of ClCG01G010070 vs. TAIR10
Match: AT2G34520.1 (AT2G34520.1 mitochondrial ribosomal protein S14)

HSP 1 Score: 101.3 bits (251), Expect = 9.6e-22
Identity = 48/82 (58.54%), Postives = 64/82 (78.05%), Query Frame = 1


Query: 182 LENSSSNNDIPALAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNR 241
           ++ +S+++    LAA+FE +RKLYKA C DP LP+++R+++RYKLSKLPRNS F R+RNR
Sbjct: 67  VKRNSADHRRRLLAARFELRRKLYKAFCKDPDLPSEMRDKNRYKLSKLPRNSAFARIRNR 126

Query: 242 CIFT-EPRAVYQLFHVSRIVFR 263
           C+FT   R+V +LF VSRIVFR
Sbjct: 127 CVFTGRSRSVTELFRVSRIVFR 148

[Close]

BLAST of ClCG01G010070 vs. NCBI nr
Match: gi|659113442|ref|XP_008456576.1| (PREDICTED: ribosomal protein S14, mitochondrial [Cucumis melo])

HSP 1 Score: 122.1 bits (305), Expect = 1.5e-24
Identity = 62/77 (80.52%), Postives = 65/77 (84.42%), Query Frame = 1


Query: 194 LAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNRCIFT-EPRAVYQ 253
           LAAKFE KR L+KAICNDPSLP DVREEHRYKLSKLPRNS FTRLRNRCIFT  PR VYQ
Sbjct: 16  LAAKFEVKRNLFKAICNDPSLPKDVREEHRYKLSKLPRNSSFTRLRNRCIFTGRPRGVYQ 75

Query: 254 LFHVSRIVFRDWHPKVL 270
           LF +SRIVFR+   K L
Sbjct: 76  LFRMSRIVFRELAKKGL 92

[Close]

BLAST of ClCG01G010070 vs. NCBI nr
Match: gi|778672795|ref|XP_011649873.1| (PREDICTED: ribosomal protein S14, mitochondrial [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 1.7e-23
Identity = 60/77 (77.92%), Postives = 64/77 (83.12%), Query Frame = 1


Query: 194 LAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNRCIFT-EPRAVYQ 253
           LAAKFE KR L+KAICNDPSLP D+REEHR KLSKLPRNS FTRLRNRCIFT  PR VYQ
Sbjct: 16  LAAKFELKRNLFKAICNDPSLPKDIREEHRNKLSKLPRNSSFTRLRNRCIFTGRPRGVYQ 75

Query: 254 LFHVSRIVFRDWHPKVL 270
           LF +SRIVFR+   K L
Sbjct: 76  LFRMSRIVFRELAKKGL 92

[Close]

BLAST of ClCG01G010070 vs. NCBI nr
Match: gi|927682216|gb|ALE29228.1| (ribosomal protein S14 (mitochondrion) [Heuchera parviflora var. saurensis])

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20
Identity = 50/70 (71.43%), Postives = 60/70 (85.71%), Query Frame = 1


Query: 194 LAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNRCIFT-EPRAVYQ 253
           LAAK+E +RKLYKA C DP LP+D+R++HRYKLSKLPRNS F R+RNRCIFT  PR+VY+
Sbjct: 35  LAAKYELRRKLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNRCIFTGRPRSVYE 94

Query: 254 LFHVSRIVFR 263
            F +SRIVFR
Sbjct: 95  FFRISRIVFR 104

[Close]

BLAST of ClCG01G010070 vs. NCBI nr
Match: gi|557954302|gb|AHA47122.1| (ribosomal protein S14 (mitochondrion) [Amborella trichopoda])

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20
Identity = 50/70 (71.43%), Postives = 60/70 (85.71%), Query Frame = 1


Query: 194 LAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNRCIFT-EPRAVYQ 253
           LAAK+E +RKLYKA C DP LP+D+R++HRYKLSKLPRNS F R+RNRCIFT  PR+VY+
Sbjct: 15  LAAKYELRRKLYKAFCKDPDLPSDMRDKHRYKLSKLPRNSSFARVRNRCIFTGRPRSVYE 74

Query: 254 LFHVSRIVFR 263
            F +SRIVFR
Sbjct: 75  FFRISRIVFR 84

[Close]

BLAST of ClCG01G010070 vs. NCBI nr
Match: gi|870864945|gb|KMT16012.1| (hypothetical protein BVRB_3g051900 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 108.2 bits (269), Expect = 2.2e-20
Identity = 51/71 (71.83%), Postives = 60/71 (84.51%), Query Frame = 1


Query: 194 LAAKFEFKRKLYKAICNDPSLPNDVREEHRYKLSKLPRNSLFTRLRNRCIFT-EPRAVYQ 253
           LAAK+E +RKLYKA+C DP LP  ++E+HRYKLSKLPRNS F RLRNRCIFT  PRAVY+
Sbjct: 59  LAAKYELRRKLYKALCRDPELPPSMKEKHRYKLSKLPRNSAFNRLRNRCIFTGRPRAVYE 118

Query: 254 LFHVSRIVFRD 264
            F +SRIVFR+
Sbjct: 119 KFRMSRIVFRE 129

The following BLAST results are available for this feature:

BLAST of ClCG01G010070 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RT14_OENBE	3.1e-22	70.00	Ribosomal protein S14, mitochondrial OS=Oenothera berteroana GN=RPS14 PE=3 SV=2	[more]
RT14_BRANA	1.7e-20	68.57	Ribosomal protein S14, mitochondrial OS=Brassica napus GN=RPS14 PE=3 SV=1	[more]
RT14_VICFA	3.8e-20	68.57	Ribosomal protein S14, mitochondrial OS=Vicia faba GN=RPS14 PE=3 SV=2	[more]
RT14_MARPO	9.4e-19	66.20	Ribosomal protein S14, mitochondrial OS=Marchantia polymorpha GN=RPS14 PE=3 SV=2	[more]
RS14_CAUCR	9.4e-11	49.35	30S ribosomal protein S14 OS=Caulobacter crescentus (strain ATCC 19089 / CB15) G...	[more]

BLAST of ClCG01G010070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSR8_CUCSA	1.1e-23	77.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G386130 PE=4 SV=1	[more]
A0A0M5L7R7_9MAGN	9.1e-21	71.43	Ribosomal protein S14 OS=Heuchera parviflora var. saurensis GN=rps14 PE=4 SV=1	[more]
V9VFW3_AMBTC	9.1e-21	71.43	Ribosomal protein S14 OS=Amborella trichopoda GN=rps14 PE=2 SV=1	[more]
Q0QG47_JUNEF	1.6e-20	70.00	Ribosomal protein S14 OS=Juncus effusus PE=4 SV=1	[more]
A0A0J8CR24_BETVU	1.6e-20	71.83	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g051900 PE=4 S...	[more]

BLAST of ClCG01G010070 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G34520.1	9.6e-22	58.54	mitochondrial ribosomal protein S14	[more]

BLAST of ClCG01G010070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659113442\|ref\|XP_008456576.1\|	1.5e-24	80.52	PREDICTED: ribosomal protein S14, mitochondrial [Cucumis melo]	[more]
gi\|778672795\|ref\|XP_011649873.1\|	1.7e-23	77.92	PREDICTED: ribosomal protein S14, mitochondrial [Cucumis sativus]	[more]
gi\|927682216\|gb\|ALE29228.1\|	1.3e-20	71.43	ribosomal protein S14 (mitochondrion) [Heuchera parviflora var. saurensis]	[more]
gi\|557954302\|gb\|AHA47122.1\|	1.3e-20	71.43	ribosomal protein S14 (mitochondrion) [Amborella trichopoda]	[more]
gi\|870864945\|gb\|KMT16012.1\|	2.2e-20	71.83	hypothetical protein BVRB_3g051900 [Beta vulgaris subsp. vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001209	Ribosomal_S14

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G010070.1	ClCG01G010070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001209	Ribosomal protein S14	PANTHER	PTHR19836	30S RIBOSOMAL PROTEIN S14	coord: 194..262 score: 1.9
IPR001209	Ribosomal protein S14	PFAM	PF00253	Ribosomal_S14	coord: 225..263 score: 1.
None	No IPR available	GENE3D	G3DSA:4.10.830.10		coord: 221..263 score: 9.7
None	No IPR available	PANTHER	PTHR19836:SF22	SUBFAMILY NOT NAMED	coord: 194..262 score: 1.9
None	No IPR available	unknown	SSF57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 193..264 score: 7.13

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G010070	Cla008988	Watermelon (97103) v1	wcgwmB146

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G010070	Silver-seed gourd	carwcgB1012
ClCG01G010070	Cucumber (Chinese Long) v3	cucwcgB024
ClCG01G010070	Watermelon (97103) v2	wcgwmbB089
ClCG01G010070	Wax gourd	wcgwgoB233
ClCG01G010070	Cucurbita maxima (Rimu)	cmawcgB186
ClCG01G010070	Cucurbita maxima (Rimu)	cmawcgB342
ClCG01G010070	Cucurbita moschata (Rifu)	cmowcgB177
ClCG01G010070	Wild cucumber (PI 183967)	cpiwcgB025
ClCG01G010070	Cucumber (Chinese Long) v2	cuwcgB022
ClCG01G010070	Melon (DHL92) v3.5.1	mewcgB140
ClCG01G010070	Cucurbita pepo (Zucchini)	cpewcgB030
ClCG01G010070	Cucurbita pepo (Zucchini)	cpewcgB451
ClCG01G010070	Bottle gourd (USVL1VR-Ls)	lsiwcgB169
ClCG01G010070	Cucumber (Gy14) v2	cgybwcgB021
ClCG01G010070	Melon (DHL92) v3.6.1	medwcgB132