ClCG01G010060 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G010060
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Phosphatidate cytidylyltransferase
Location	CG_Chr01 : 14839743 .. 14843052 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCGGTTCAGTTGGCTCACTTGTCCAAGAAAGGTGACTCTCTTTTAATGTCCCTGTTCTAATTTAGTTTTAAAGATAGTCATGTCTAGTTACATGGGATACAATTGCAGGATTTATCAACTGGTTGGCTTCACTGTGATCCAGGTCCCATGTTCACACCAGAATATTTTACTTTGCCTGGATGGATTCCTACATGGGTGAGTATAGTGATATTACTTGAATCTGATTATTTATTTCTTTATCATTTTTTTAATCATTTTGGTAAATGTACTTGCTTTTCCTTTGTGTGATCTGATCATGTCGCATAGATATTTTTTATATGCATTAGGCCATGTTCTTTTTCGTTTTGACCTTTTTGGATTGAATCAGAAAAGTTTAGCCTCTGCCTTACATCTTTGTTGGAAGCCTGATTGATTGCTCTAATAGATGGATTTGTTTGAGATTGCATTTTTGGAATAGTCTGCATTCTATGATTTGCAAGCTTGGCTGTTTAGAGTTCTTGATATTACAATTAGTTATTGTTTGCCGATCTTTATTGAACTTTCTAACTCGAATAATTGTTTTACAGTTCCCATGGAAAGATGTCACGATTCTGCGAGTTCAATGGCACGCTATATGTCTTGGGTTGTTTGCATCAATAATAGCTCCTTTTGGCGGCTTCTTTGCAAGTGGCTTTAAGAGAGCTTTTAAAATCAAGGTTTGTCACTTTTCATATGTCAAGCCCATTGATTTTGTAACTTCAATAAATTTGATGCTTTTGTACCCTTTGAAGGATTTTGGTGATAGCATTCCTGGACATGGTGGAATCACAGATAGGATGGATTGTCAGGTATGCTGAATTAGTTTAGATAGTAAAGAATACTTTATTAGATACAGGCTGTAGATTCGAGTTTCCCTCTTAATTTGGATTTATTGTGAACTTGGATGACTTGGATTGTAGATGACTGATGTGTGAATACTTTATCCCTATTATTATATACAGGCTGTAGATATGATGCTATGGAAAAAATATATAGAAAGTTGTGTGCACGCTGAAGATGAAAAAGCACACAAAATATTGTCACTTGGTGCACTGACACAAGTATACACTAGCACATCAGCAAGTAGTAGGTTTGTATTCCTGGGTTGAATCCTTAGAAAAAAGACTTAAATGTATTCAACAAAACAAGCAAGCAATTAACAAGACACATTATATGAGACTAACCACTAACAAATGTGTTTTGGTGATTTTGGTGCGTAAATGTAAATGCTATAAAAATAAACAAATGTGATACGCCAGGAAAGTTATATGCAGTGCAACAAGATTTGACTCTCGCTGTGCTATGCTGCACCTGTCGGGCTAAATACTCATTTTATTGAATCAAAGTAGGGGGAACCTTCTATCCTACCCTTCCCGTGCAATGCCATGCAAACAAGACTAGTTATATTCCTATGGGCTACCCTTGTTCTTGAAGCAACACCCTATTCCAACCTTTCCTGAGCCATTTTTCCCAATTTTCTCTAGATTGATTTCTCTGCCAATATGTAAAGTATCTCCATACTTTGATAAGAGAGGAAGAAAGTGGCCCCACGCAATGCACAAGCAAACCTAGCCAACTAGAGCCTAAGAAGCATGGGCACTTCAGTTTGGCTAGTGTGTTTGTGTCTAACACTGACAAGCACTTAGATACTCCAACACTTGTTGGACATGTATTAGACACTTGTTAACACAATGGATGTGTTAAACACTAGTTGTACATAGCCAATATAGGTCTACGTCCAACATTTGTTAACATGTATCAAACTCTTGTCTTTAAATAAATTTTAGGAGTGAAATGCATCAAACTCATGTTAAACATATAAAATGCATTAATCAATTGTTTGAATTTTCTTCTGGTATAAAAATAATGTACATATTAAAACATATATTTTAATAAATGTGTCCTTGGCATGTCTCACCCTTTCACGTTTCCATCATTGCTCAATCTCACTGCCAGTTGCTCGCCTTCTCTTGATCAACACTCCAAGTTTCCAACTCTCTATTTCTCTATCCTTCCCCCTCAAGTTTTGTATCTGATTCTGTTGTGAGAATTGATGGTGTAATCAACCAAACAAGTTCAGCTCATTTTAGTCCTATCCGCTGCTTTGCTTCAATCAGCACAAAACCAACCTATCTGCCTCCCTAACAATGTTTTAAAAACCTATTGATGAAGCTTATACCTTGAGGCAAGGCTTGAAAGTTTAGCCTTGATACCTACGCCTTCGTTGAACCATAAGAGGTTTATGCCTTTGTGAAAATGCACCAAGTCTTAAAATCTCTAGGCTTCGTCCAATGATTAGAAAAATAATAGTGATATGCCTAATTCTTCAAACATATTAAGGTTCGAGTTGTGTGCAACGATTTGAACTAGGACTACTTTTGTTGTTGTGACTTTAAAAACATTGAAGGCAAAAATTTATAGTATAAATCAATCCTATTAATGATAGTAGTAGTAGTAGTATTGGTGGTGACGATAACAATATCCTTATAGATTTTTGATTATGTGAAAATTGTGGGGTGAATTTTCTTTTTACACTTTGATATGACTATGATGTTCAGTAGTACTTGGTCATACCGATTTAGGATTGGTAAAATGTTTTTAATTCACTATTTGAGGCTTATGCCTCACCTCTTCGAGAGAAAAAGCCTCAAGGCCACTTTTATCCTTTTAAAACTTTGATCCCTAATACTTTTTTGCATAGTCCATTGCTCCTTTCCTTGTTTCCCGCAGTTCAAATATTTGGTTTTTCAAATGTAGATGGTTATGGCCGTGTTTTCATACATCTATCATCAATCATTTGTCGTGTCTCAGAGCATCACTGTTGAATCAATTATTGACCAGGTTAGATGATTGTCTCATTCATTCACCTTTCCCTTATTAGAAAAAGAATCTGTTGACTATTGATGGTATTCATTTATTTTAGGTACTAATGAACCTTACGTTTGAGGAGCAACAACTTCTTTTCATGAAACTTGGGCAAATGTTGCAAGATAGGCTATTCCCACAATAGTAAGATCTGTCGTCCTTTTGTATATGGTGATCTAGGATTAAAGATTTAATACTGACCTGTACATGGATATTGTGTCGTATTTTTTTCCCTCCTATAATTTATCTGCAACAAGTGTTGGAATTAAGATGATTGTTCCTCCATTTGCACTTTGTATAGTTTGTGTGCATCTTGATCTGTACAAGGGAGGGTGGAACCATGGCCTCTCTTTTTTATTTTAGAGCACGAGTGTAAATACTATTGAAAACTAAGCTCAATGAACTGAAGTTTTATGTCTTGC

mRNA sequence

ATGGGTCGGTTCAGTTGGCTCACTTGTCCAAGAAAGGATTTATCAACTGGTTGGCTTCACTGTGATCCAGGTCCCATGTTCACACCAGAATATTTTACTTTGCCTGGATGGATTCCTACATGGTTCCCATGGAAAGATGTCACGATTCTGCGAGTTCAATGGCACGCTATATGTCTTGGGTTGTTTGCATCAATAATAGCTCCTTTTGGCGGCTTCTTTGCAAGTGGCTTTAAGAGAGCTTTTAAAATCAAGGATTTTGGTGATAGCATTCCTGGACATGGTGGAATCACAGATAGGATGGATTGTCAGATGGTTATGGCCGTGTTTTCATACATCTATCATCAATCATTTGTCGTGTCTCAGAGCATCACTGTTGAATCAATTATTGACCAGGTACTAATGAACCTTACGTTTGAGGAGCAACAACTTCTTTTCATGAAACTTGGGCAAATGTTGCAAGATAGGCTATTCCCACAATAGTAAGATCTGTCGTCCTTTTGTATATGGTGATCTAGGATTAAAGATTTAATACTGACCTGTACATGGATATTGTGTCGTATTTTTTTCCCTCCTATAATTTATCTGCAACAAGTGTTGGAATTAAGATGATTGTTCCTCCATTTGCACTTTGTATAGTTTGTGTGCATCTTGATCTGTACAAGGGAGGGTGGAACCATGGCCTCTCTTTTTTATTTTAGAGCACGAGTGTAAATACTATTGAAAACTAAGCTCAATGAACTGAAGTTTTATGTCTTGC

Coding sequence (CDS)

ATGGGTCGGTTCAGTTGGCTCACTTGTCCAAGAAAGGATTTATCAACTGGTTGGCTTCACTGTGATCCAGGTCCCATGTTCACACCAGAATATTTTACTTTGCCTGGATGGATTCCTACATGGTTCCCATGGAAAGATGTCACGATTCTGCGAGTTCAATGGCACGCTATATGTCTTGGGTTGTTTGCATCAATAATAGCTCCTTTTGGCGGCTTCTTTGCAAGTGGCTTTAAGAGAGCTTTTAAAATCAAGGATTTTGGTGATAGCATTCCTGGACATGGTGGAATCACAGATAGGATGGATTGTCAGATGGTTATGGCCGTGTTTTCATACATCTATCATCAATCATTTGTCGTGTCTCAGAGCATCACTGTTGAATCAATTATTGACCAGGTACTAATGAACCTTACGTTTGAGGAGCAACAACTTCTTTTCATGAAACTTGGGCAAATGTTGCAAGATAGGCTATTCCCACAATAG

Protein sequence

MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVSQSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRLFPQ

Homology

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BLAST of ClCG01G010060 vs. Swiss-Prot
Match: CDS1_ARATH (Phosphatidate cytidylyltransferase 1 OS=Arabidopsis thaliana GN=CDS1 PE=1 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 9.3e-75
Identity = 126/156 (80.77%), Postives = 140/156 (89.74%), Query Frame = 1


Query: 1   MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 60
           +GRF WLTCPR+DLSTGWL CD  P+F PE F LP WIP WFPWK++TIL VQWHA+CLG
Sbjct: 265 LGRFPWLTCPRQDLSTGWLQCDADPLFKPEPFALPAWIPEWFPWKEMTILPVQWHALCLG 324

Query: 61  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 120
           LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVF+YIY QSF+VS
Sbjct: 325 LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYLQSFIVS 384

Query: 121 QSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRL 157
           QS++V+ I+DQ+L NLTFEEQQ LF+KLGQML+D+L
Sbjct: 385 QSVSVDKILDQILTNLTFEEQQALFVKLGQMLKDKL 420

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BLAST of ClCG01G010060 vs. Swiss-Prot
Match: CDS1_SOLTU (Phosphatidate cytidylyltransferase 1 OS=Solanum tuberosum GN=CDS1 PE=1 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 2.8e-71
Identity = 117/156 (75.00%), Postives = 137/156 (87.82%), Query Frame = 1


Query: 2   GRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLGL 61
           GRF WLTCPRKDLSTGWL CDPGP+F PEYFTLP W P WF  +++ +L VQWHA+ LGL
Sbjct: 266 GRFQWLTCPRKDLSTGWLDCDPGPLFKPEYFTLPEWFPAWFLSREIAVLPVQWHALLLGL 325

Query: 62  FASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVSQ 121
           FASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGG+TDRMDCQMVMAVF+YIYHQSF+V Q
Sbjct: 326 FASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGMTDRMDCQMVMAVFAYIYHQSFIVPQ 385

Query: 122 SITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRLF 158
           ++++E I+DQ+++NLTFEEQ  ++ KLGQ++Q+R F
Sbjct: 386 NLSIEMILDQIILNLTFEEQLAVYKKLGQIIQERTF 421

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BLAST of ClCG01G010060 vs. Swiss-Prot
Match: CDS2_ARATH (Phosphatidate cytidylyltransferase 2 OS=Arabidopsis thaliana GN=CDS2 PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 1.8e-70
Identity = 118/156 (75.64%), Postives = 136/156 (87.18%), Query Frame = 1


Query: 1   MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 60
           MGRF WLTCPR+DLSTGWL CDPGP+F  E   LPGWI  W PWK+++IL VQWHA+CLG
Sbjct: 265 MGRFLWLTCPREDLSTGWLLCDPGPLFKQETHALPGWISDWLPWKEISILPVQWHALCLG 324

Query: 61  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 120
           LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVF+YIYHQSFVV 
Sbjct: 325 LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFVVP 384

Query: 121 QSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRL 157
           + ++V+ ++DQ++ +LT EEQQ L +KLGQMLQ+++
Sbjct: 385 EVLSVDKLLDQIITSLTLEEQQALLVKLGQMLQEKV 420

[Close]

BLAST of ClCG01G010060 vs. Swiss-Prot
Match: CDS3_ARATH (Phosphatidate cytidylyltransferase 3 OS=Arabidopsis thaliana GN=CDS3 PE=1 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 8.7e-65
Identity = 110/156 (70.51%), Postives = 129/156 (82.69%), Query Frame = 1


Query: 1   MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 60
           +G+F WLTCPRKDLSTGWLHCDPGP+F PEY+  P WI  + PWK ++ L VQWHA  LG
Sbjct: 312 LGQFQWLTCPRKDLSTGWLHCDPGPLFRPEYYPFPSWITPFSPWKGISTLPVQWHAFSLG 371

Query: 61  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 120
           LFASI+APFGGFFASGFKRAFKIKDFGDSIPGHGG TDRMDCQMVMAVF+YIY QSF+V+
Sbjct: 372 LFASIMAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMVMAVFAYIYIQSFIVN 431

Query: 121 QSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRL 157
           +  +VE I+DQ+  +L  EEQ++L+ KLG +LQ +L
Sbjct: 432 RDYSVEMILDQISRSLGHEEQKMLYEKLGDILQHKL 467

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BLAST of ClCG01G010060 vs. Swiss-Prot
Match: CDS1_YEAST (Phosphatidate cytidylyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDS1 PE=1 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-32
Identity = 64/136 (47.06%), Postives = 91/136 (66.91%), Query Frame = 1


Query: 4   FSWLTCPRKDLSTGW---LHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 63
           +++LTCP +DL T +   L C+  P+F P+ + LP           +T+  + +HA+ L 
Sbjct: 277 YTYLTCPVEDLHTNFFSNLTCELNPVFLPQVYRLPPIFFDKVQINSITVKPIYFHALNLA 336

Query: 64  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 123
            FAS+ APFGGFFASG KR FK+KDFG SIPGHGGITDR+DCQ +M  F+ +Y+++F+  
Sbjct: 337 TFASLFAPFGGFFASGLKRTFKVKDFGHSIPGHGGITDRVDCQFIMGSFANLYYETFISE 396

Query: 124 QSITVESIIDQVLMNL 137
             ITV++++  +LMNL
Sbjct: 397 HRITVDTVLSTILMNL 412

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BLAST of ClCG01G010060 vs. TrEMBL
Match: A0A0A0LT55_CUCSA (Phosphatidate cytidylyltransferase OS=Cucumis sativus GN=Csa_1G194700 PE=3 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 1.3e-88
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 1


Query: 1   MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 60
           MGRFSWLTCPRKDLSTGWLHCDPGPMFTPE+FTLPGWIPTWFPWKDVTILRVQWHAICLG
Sbjct: 265 MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEFFTLPGWIPTWFPWKDVTILRVQWHAICLG 324

Query: 61  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 120
           LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS
Sbjct: 325 LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 384

Query: 121 QSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRLFPQ 160
           QSITVESIIDQVLMNLTFEEQQLLF KLGQMLQDRLF Q
Sbjct: 385 QSITVESIIDQVLMNLTFEEQQLLFTKLGQMLQDRLFLQ 423

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BLAST of ClCG01G010060 vs. TrEMBL
Match: A0A0D2UIT1_GOSRA (Phosphatidate cytidylyltransferase OS=Gossypium raimondii GN=B456_010G250500 PE=3 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.0e-75
Identity = 130/156 (83.33%), Postives = 143/156 (91.67%), Query Frame = 1


Query: 1   MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 60
           +GRF WLTCPRKDLSTGWL CDPGP+F PEY+TLPGWI  WFPWK+++IL VQWHA+CLG
Sbjct: 265 LGRFQWLTCPRKDLSTGWLQCDPGPLFKPEYYTLPGWISQWFPWKEISILPVQWHALCLG 324

Query: 61  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 120
           LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVF+YIYHQSF+V 
Sbjct: 325 LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVR 384

Query: 121 QSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRL 157
           + I+VE I+DQVL NLTFEEQQ L  KLGQ+LQDRL
Sbjct: 385 EGISVEMILDQVLTNLTFEEQQTLLAKLGQILQDRL 420

[Close]

BLAST of ClCG01G010060 vs. TrEMBL
Match: A0A067JMG2_JATCU (Phosphatidate cytidylyltransferase OS=Jatropha curcas GN=JCGZ_21145 PE=3 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 2.2e-75
Identity = 129/156 (82.69%), Postives = 144/156 (92.31%), Query Frame = 1


Query: 1   MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 60
           MGRF WLTCPRKDLS+GWL CDPGP+F PEYFTLP WIP WFPWK+V+IL VQWHA+CLG
Sbjct: 263 MGRFQWLTCPRKDLSSGWLQCDPGPLFKPEYFTLPEWIPEWFPWKEVSILPVQWHAMCLG 322

Query: 61  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 120
           LFASIIAPFGGFFASGFKRAFK+KDFGDSIPGHGGITDRMDCQMVMAVF+YIYHQSFVV 
Sbjct: 323 LFASIIAPFGGFFASGFKRAFKVKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFVVP 382

Query: 121 QSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRL 157
           QSI+VE I+DQ+L NLTFEEQ  L+ KLG+++Q+RL
Sbjct: 383 QSISVEMILDQILTNLTFEEQHALYTKLGEIIQERL 418

[Close]

BLAST of ClCG01G010060 vs. TrEMBL
Match: V4KDG0_EUTSA (Phosphatidate cytidylyltransferase OS=Eutrema salsugineum GN=EUTSA_v10023471mg PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 3.2e-74
Identity = 128/155 (82.58%), Postives = 142/155 (91.61%), Query Frame = 1


Query: 1   MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 60
           +GRF WLTCPR+DLSTGWLHCD  PMF PE FTLP WIP WFPWK++ +L VQWHA+CLG
Sbjct: 265 LGRFPWLTCPRQDLSTGWLHCDADPMFKPEPFTLPAWIPEWFPWKEMEVLPVQWHALCLG 324

Query: 61  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 120
           LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVF+YIY QSF+VS
Sbjct: 325 LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYLQSFIVS 384

Query: 121 QSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDR 156
           QS++V+ I+DQ+L NLTFEEQQ LFMKLGQMLQD+
Sbjct: 385 QSVSVDKILDQILTNLTFEEQQALFMKLGQMLQDK 419

[Close]

BLAST of ClCG01G010060 vs. TrEMBL
Match: A0A059B206_EUCGR (Phosphatidate cytidylyltransferase OS=Eucalyptus grandis GN=EUGRSUZ_H02887 PE=3 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.6e-73
Identity = 124/159 (77.99%), Postives = 143/159 (89.94%), Query Frame = 1


Query: 1   MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 60
           MGRF WLTCPRKDLST WL CDPGP+F PEY+T+P W P WFPWK++ I+ VQWHA+CLG
Sbjct: 261 MGRFQWLTCPRKDLSTSWLQCDPGPLFRPEYYTVPKWFPEWFPWKEMAIMPVQWHALCLG 320

Query: 61  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 120
           LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVF+YIYHQSFVV 
Sbjct: 321 LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFVVG 380

Query: 121 QSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRLFPQ 160
           Q++ VE+I++Q+LMNLT +EQQ L+MKLGQ+L +R+  Q
Sbjct: 381 QNLMVETILEQILMNLTLDEQQTLYMKLGQILNERMTAQ 419

[Close]

BLAST of ClCG01G010060 vs. TAIR10
Match: AT1G62430.1 (AT1G62430.1 CDP-diacylglycerol synthase 1)

HSP 1 Score: 280.8 bits (717), Expect = 5.2e-76
Identity = 126/156 (80.77%), Postives = 140/156 (89.74%), Query Frame = 1


Query: 1   MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 60
           +GRF WLTCPR+DLSTGWL CD  P+F PE F LP WIP WFPWK++TIL VQWHA+CLG
Sbjct: 265 LGRFPWLTCPRQDLSTGWLQCDADPLFKPEPFALPAWIPEWFPWKEMTILPVQWHALCLG 324

Query: 61  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 120
           LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVF+YIY QSF+VS
Sbjct: 325 LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYLQSFIVS 384

Query: 121 QSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRL 157
           QS++V+ I+DQ+L NLTFEEQQ LF+KLGQML+D+L
Sbjct: 385 QSVSVDKILDQILTNLTFEEQQALFVKLGQMLKDKL 420

[Close]

BLAST of ClCG01G010060 vs. TAIR10
Match: AT4G22340.3 (AT4G22340.3 cytidinediphosphate diacylglycerol synthase 2)

HSP 1 Score: 266.5 bits (680), Expect = 1.0e-71
Identity = 118/156 (75.64%), Postives = 136/156 (87.18%), Query Frame = 1


Query: 1   MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 60
           MGRF WLTCPR+DLSTGWL CDPGP+F  E   LPGWI  W PWK+++IL VQWHA+CLG
Sbjct: 289 MGRFLWLTCPREDLSTGWLLCDPGPLFKQETHALPGWISDWLPWKEISILPVQWHALCLG 348

Query: 61  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 120
           LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVF+YIYHQSFVV 
Sbjct: 349 LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFVVP 408

Query: 121 QSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRL 157
           + ++V+ ++DQ++ +LT EEQQ L +KLGQMLQ+++
Sbjct: 409 EVLSVDKLLDQIITSLTLEEQQALLVKLGQMLQEKV 444

[Close]

BLAST of ClCG01G010060 vs. TAIR10
Match: AT4G26770.1 (AT4G26770.1 Phosphatidate cytidylyltransferase family protein)

HSP 1 Score: 247.7 bits (631), Expect = 4.9e-66
Identity = 110/156 (70.51%), Postives = 129/156 (82.69%), Query Frame = 1


Query: 1   MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 60
           +G+F WLTCPRKDLSTGWLHCDPGP+F PEY+  P WI  + PWK ++ L VQWHA  LG
Sbjct: 312 LGQFQWLTCPRKDLSTGWLHCDPGPLFRPEYYPFPSWITPFSPWKGISTLPVQWHAFSLG 371

Query: 61  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 120
           LFASI+APFGGFFASGFKRAFKIKDFGDSIPGHGG TDRMDCQMVMAVF+YIY QSF+V+
Sbjct: 372 LFASIMAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMVMAVFAYIYIQSFIVN 431

Query: 121 QSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRL 157
           +  +VE I+DQ+  +L  EEQ++L+ KLG +LQ +L
Sbjct: 432 RDYSVEMILDQISRSLGHEEQKMLYEKLGDILQHKL 467

[Close]

BLAST of ClCG01G010060 vs. NCBI nr
Match: gi|778659831|ref|XP_011655126.1| (PREDICTED: phosphatidate cytidylyltransferase 1-like [Cucumis sativus])

HSP 1 Score: 333.6 bits (854), Expect = 1.9e-88
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 1


Query: 1   MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 60
           MGRFSWLTCPRKDLSTGWLHCDPGPMFTPE+FTLPGWIPTWFPWKDVTILRVQWHAICLG
Sbjct: 265 MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEFFTLPGWIPTWFPWKDVTILRVQWHAICLG 324

Query: 61  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 120
           LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS
Sbjct: 325 LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 384

Query: 121 QSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRLFPQ 160
           QSITVESIIDQVLMNLTFEEQQLLF KLGQMLQDRLF Q
Sbjct: 385 QSITVESIIDQVLMNLTFEEQQLLFTKLGQMLQDRLFLQ 423

[Close]

BLAST of ClCG01G010060 vs. NCBI nr
Match: gi|659118130|ref|XP_008458962.1| (PREDICTED: phosphatidate cytidylyltransferase-like [Cucumis melo])

HSP 1 Score: 333.6 bits (854), Expect = 1.9e-88
Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 1


Query: 1   MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 60
           MGRFSWLTCPRKDLSTGWLHCDPGPMFTPE+FTLPGWIPTWFPWKDVTILRVQWHAICLG
Sbjct: 265 MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEFFTLPGWIPTWFPWKDVTILRVQWHAICLG 324

Query: 61  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 120
           LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS
Sbjct: 325 LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 384

Query: 121 QSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRLFPQ 160
           QSITVESIIDQVLMNLTFEEQQLLF KLGQMLQDRLF Q
Sbjct: 385 QSITVESIIDQVLMNLTFEEQQLLFTKLGQMLQDRLFLQ 423

[Close]

BLAST of ClCG01G010060 vs. NCBI nr
Match: gi|823235481|ref|XP_012450380.1| (PREDICTED: phosphatidate cytidylyltransferase 2-like [Gossypium raimondii])

HSP 1 Score: 290.8 bits (743), Expect = 1.4e-75
Identity = 130/156 (83.33%), Postives = 143/156 (91.67%), Query Frame = 1


Query: 1   MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 60
           +GRF WLTCPRKDLSTGWL CDPGP+F PEY+TLPGWI  WFPWK+++IL VQWHA+CLG
Sbjct: 265 LGRFQWLTCPRKDLSTGWLQCDPGPLFKPEYYTLPGWISQWFPWKEISILPVQWHALCLG 324

Query: 61  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 120
           LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVF+YIYHQSF+V 
Sbjct: 325 LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFIVR 384

Query: 121 QSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRL 157
           + I+VE I+DQVL NLTFEEQQ L  KLGQ+LQDRL
Sbjct: 385 EGISVEMILDQVLTNLTFEEQQTLLAKLGQILQDRL 420

[Close]

BLAST of ClCG01G010060 vs. NCBI nr
Match: gi|731439315|ref|XP_003635028.2| (PREDICTED: phosphatidate cytidylyltransferase [Vitis vinifera])

HSP 1 Score: 290.8 bits (743), Expect = 1.4e-75
Identity = 129/159 (81.13%), Postives = 146/159 (91.82%), Query Frame = 1


Query: 1   MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 60
           MGRF WLTCPRKDLSTGWLHCDPGP+F PEYF L GW+P WFPWK+V+IL VQWHA+C+G
Sbjct: 265 MGRFQWLTCPRKDLSTGWLHCDPGPLFKPEYFDLSGWVPRWFPWKEVSILPVQWHALCVG 324

Query: 61  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 120
           LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVF+Y YHQSFV++
Sbjct: 325 LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFAYTYHQSFVMA 384

Query: 121 QSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRLFPQ 160
           QS +VE I++Q+LMNLTFEEQQ L++KLGQM ++R F Q
Sbjct: 385 QSCSVEMILEQILMNLTFEEQQDLYVKLGQMFRERQFRQ 423

[Close]

BLAST of ClCG01G010060 vs. NCBI nr
Match: gi|802778808|ref|XP_012091244.1| (PREDICTED: phosphatidate cytidylyltransferase 1 [Jatropha curcas])

HSP 1 Score: 289.7 bits (740), Expect = 3.2e-75
Identity = 129/156 (82.69%), Postives = 144/156 (92.31%), Query Frame = 1


Query: 1   MGRFSWLTCPRKDLSTGWLHCDPGPMFTPEYFTLPGWIPTWFPWKDVTILRVQWHAICLG 60
           MGRF WLTCPRKDLS+GWL CDPGP+F PEYFTLP WIP WFPWK+V+IL VQWHA+CLG
Sbjct: 263 MGRFQWLTCPRKDLSSGWLQCDPGPLFKPEYFTLPEWIPEWFPWKEVSILPVQWHAMCLG 322

Query: 61  LFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGITDRMDCQMVMAVFSYIYHQSFVVS 120
           LFASIIAPFGGFFASGFKRAFK+KDFGDSIPGHGGITDRMDCQMVMAVF+YIYHQSFVV 
Sbjct: 323 LFASIIAPFGGFFASGFKRAFKVKDFGDSIPGHGGITDRMDCQMVMAVFAYIYHQSFVVP 382

Query: 121 QSITVESIIDQVLMNLTFEEQQLLFMKLGQMLQDRL 157
           QSI+VE I+DQ+L NLTFEEQ  L+ KLG+++Q+RL
Sbjct: 383 QSISVEMILDQILTNLTFEEQHALYTKLGEIIQERL 418

The following BLAST results are available for this feature:

BLAST of ClCG01G010060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CDS1_ARATH	9.3e-75	80.77	Phosphatidate cytidylyltransferase 1 OS=Arabidopsis thaliana GN=CDS1 PE=1 SV=1	[more]
CDS1_SOLTU	2.8e-71	75.00	Phosphatidate cytidylyltransferase 1 OS=Solanum tuberosum GN=CDS1 PE=1 SV=1	[more]
CDS2_ARATH	1.8e-70	75.64	Phosphatidate cytidylyltransferase 2 OS=Arabidopsis thaliana GN=CDS2 PE=1 SV=1	[more]
CDS3_ARATH	8.7e-65	70.51	Phosphatidate cytidylyltransferase 3 OS=Arabidopsis thaliana GN=CDS3 PE=1 SV=1	[more]
CDS1_YEAST	2.0e-32	47.06	Phosphatidate cytidylyltransferase OS=Saccharomyces cerevisiae (strain ATCC 2045...	[more]

BLAST of ClCG01G010060 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LT55_CUCSA	1.3e-88	98.11	Phosphatidate cytidylyltransferase OS=Cucumis sativus GN=Csa_1G194700 PE=3 SV=1	[more]
A0A0D2UIT1_GOSRA	1.0e-75	83.33	Phosphatidate cytidylyltransferase OS=Gossypium raimondii GN=B456_010G250500 PE=...	[more]
A0A067JMG2_JATCU	2.2e-75	82.69	Phosphatidate cytidylyltransferase OS=Jatropha curcas GN=JCGZ_21145 PE=3 SV=1	[more]
V4KDG0_EUTSA	3.2e-74	82.58	Phosphatidate cytidylyltransferase OS=Eutrema salsugineum GN=EUTSA_v10023471mg P...	[more]
A0A059B206_EUCGR	1.6e-73	77.99	Phosphatidate cytidylyltransferase OS=Eucalyptus grandis GN=EUGRSUZ_H02887 PE=3 ...	[more]

BLAST of ClCG01G010060 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G62430.1	5.2e-76	80.77	CDP-diacylglycerol synthase 1	[more]
AT4G22340.3	1.0e-71	75.64	cytidinediphosphate diacylglycerol synthase 2	[more]
AT4G26770.1	4.9e-66	70.51	Phosphatidate cytidylyltransferase family protein	[more]

BLAST of ClCG01G010060 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778659831\|ref\|XP_011655126.1\|	1.9e-88	98.11	PREDICTED: phosphatidate cytidylyltransferase 1-like [Cucumis sativus]	[more]
gi\|659118130\|ref\|XP_008458962.1\|	1.9e-88	98.11	PREDICTED: phosphatidate cytidylyltransferase-like [Cucumis melo]	[more]
gi\|823235481\|ref\|XP_012450380.1\|	1.4e-75	83.33	PREDICTED: phosphatidate cytidylyltransferase 2-like [Gossypium raimondii]	[more]
gi\|731439315\|ref\|XP_003635028.2\|	1.4e-75	81.13	PREDICTED: phosphatidate cytidylyltransferase [Vitis vinifera]	[more]
gi\|802778808\|ref\|XP_012091244.1\|	3.2e-75	82.69	PREDICTED: phosphatidate cytidylyltransferase 1 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000374	PC_trans

Vocabulary: **Molecular Function**
Term	Definition
GO:0016772	transferase activity, transferring phosphorus-containing groups

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016024	CDP-diacylglycerol biosynthetic process
biological_process	GO:0080186	developmental vegetative growth
biological_process	GO:0046486	glycerolipid metabolic process
biological_process	GO:0008654	phospholipid biosynthetic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016020	membrane
molecular_function	GO:0004605	phosphatidate cytidylyltransferase activity
molecular_function	GO:0016772	transferase activity, transferring phosphorus-containing groups
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G010060.1	ClCG01G010060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000374	Phosphatidate cytidylyltransferase	PROSITE	PS01315	CDS	coord: 75..101 scor
None	No IPR available	PANTHER	PTHR13773	PHOSPHATIDATE CYTIDYLYLTRANSFERASE	coord: 1..155 score: 3.3E
None	No IPR available	PANTHER	PTHR13773:SF13	SUBFAMILY NOT NAMED	coord: 1..155 score: 3.3E
None	No IPR available	PFAM	PF01148	CTP_transf_1	coord: 50..117 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G010060	Csa1G194700	Cucumber (Chinese Long) v2	cuwcgB022
ClCG01G010060	MELO3C021695	Melon (DHL92) v3.5.1	mewcgB140
ClCG01G010060	Cla008987	Watermelon (97103) v1	wcgwmB146
ClCG01G010060	Cla97C01G010120	Watermelon (97103) v2	wcgwmbB089
ClCG01G010060	Bhi08G000681	Wax gourd	wcgwgoB233
ClCG01G010060	CSPI01G16130	Wild cucumber (PI 183967)	cpiwcgB025
ClCG01G010060	CmaCh13G004030	Cucurbita maxima (Rimu)	cmawcgB186
ClCG01G010060	CmaCh18G005940	Cucurbita maxima (Rimu)	cmawcgB342
ClCG01G010060	CmoCh13G004270	Cucurbita moschata (Rifu)	cmowcgB177
ClCG01G010060	Lsi02G010950	Bottle gourd (USVL1VR-Ls)	lsiwcgB169
ClCG01G010060	Cp4.1LG09g06610	Cucurbita pepo (Zucchini)	cpewcgB030
ClCG01G010060	Cp4.1LG20g06430	Cucurbita pepo (Zucchini)	cpewcgB451
ClCG01G010060	CsGy1G015750	Cucumber (Gy14) v2	cgybwcgB021
ClCG01G010060	MELO3C021695.2	Melon (DHL92) v3.6.1	medwcgB132
ClCG01G010060	Carg25131	Silver-seed gourd	carwcgB1012
ClCG01G010060	CsaV3_1G018390	Cucumber (Chinese Long) v3	cucwcgB024

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None