ClCG01G009720 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AAATCCTTGGAGTCTTGTTCTGCTGCTGTGGTCCTCGTTTCGACTGTCTTCTTTGCCGCTGCCTACACTGTCATTGGTGGGGTCAATAGCAAGATGGGCTCTTCATTTTTCCTCATATTGAACCTAATCTACATTGTGTTCACGGTCATGGACATTGTTGCCCTTGCCACCGTGCTCAAGTCGGTGGTTTTGTTTTCATCGATTCTAACGTCATCGTTTAAGATCAAGGATTTTCCACATACGTTGCCGATGAAGCTCTCGATTGGATTCCAGTTGTTGTGTCTTCTCGGTGGCAAGTACGATGATGGCGTTTGCTTTGACGATTGTGTTGATGGTGAAGTCGGAGGAGATGAAATGAACGGTAAGTTTGTTGTATATGGCGACGTTTCTTTTGGTGACCATGTTTATAATAATTCGGCTGTCTTTTTTATGTGGAAGTGGTGAAGAATATTGGGAGTTATCGTCGCTATATTTCCAAGTTTCTTGCTCTATTTTGGAAACTTCCTTCCCAAATTTTGAGTAGGAAATTTGTTTGATATATTAGCCCTGCCTTTGTATTTGCAGGTATCTAATCATGAATGAAAGTTAAAAATTAAATCATTTAAAAAATAGAAAACATATTGAAAATATTTACAAATATAATAAAATTTTTCTTTCTATAGGCCTAGATAGATATCTATCACTTTACTAGATCTATTTAGATCTATCACGATCTATCACAAATAAAAAGTAAAATTTTGCTATATTTATAAATAGTTTGATATTTTTTCTATTTAGAATAATTTTCCATCATTTTTAATATATTTTTTCTTTTTAATTTAAGTTTAGGTTGAATTGTACCAAATAACTTTGGGATTTGAGAAAGATTCATGTGAAATACTTAGTATTGCATTGCATTAACTATGTGACAAACTATAGTTAGAACACTTGTCTAAACTCTAAAAGATGAATATAGCCCAAAATGCATGCAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNAAAGTAAAGACAAGTATGAAATTGAAGAGACAGGTGTTTAAGGGTGTTAATTTCTTTAATTAGTTCATTAAGCCATACAAAAGGTCCTATTGTATTAATAATATGTTTAAGTCTAAAAATTATTTTACGGATCATTATTATCTTTCAGTAACAATCTTTTCTCATGCAAACATAATTGATTATACTAATTGCTTGAAACCAAATTAAGAAGCATGACATTAAGAATAGTCATGAACAACTTCATTATTAACCTAACTATTTTCATGATAGATTAGATAATAATCCAATATTATAAATCCAATTAAACATATCATATTTCTAATTAAACCTTTAATTTAACATGCATTAACTGAGGATCAATCTATTTATTAAGCACATAATATTGAAAATCATTCAAGAACATGACATCCATATAAGATAATATGCATTAACTTAAATGCATAAATAAATTAATCAACACCCTAGCACTCAAATAGTATAACGTGTGCAATGCCAAATTCCTGCACTTTACAACATGGACCATGCTGAGGAACGAATTTCGGCCTAACAAAATAAAGCCACAAATCAAGATAAATCAAGAGAGATAATATAAAATAAGATAAAATGAAATAGGAAAAGATTTGATCTTGGTTAGGATTAGGAAATTATTATATCTTAATCCTAGCAGATTTTAGATAAATCATAGACCAAATACCCTTAAATACACCATAATGCCTCCTTCAAAGGTATCTTAAAACTTCAACTTCTTCTCTATTATTTAGTTTCCTTATTGACTTAGACATCAGAGCCCATTTTCTTTGTTTTGCTGGTCCTCTCTTCTCCAAATTACAAATTAATGGTTGATGTCACATGGAGGTCAAGTGCGATTTTCCTTGGTCCAAATTGGGCATCAAACACACAACAACAACAAGAAATGGATAACTTGCGAGTTCTTTTACAAGACACATGAATAAAATGGTTGGACAATGCCAAAAAATGGCTCAAGAAATCCTTGGAGTCTTGTTCTGCTGCTGTGGTCCTCGTTTCGACTGTCTTCTTTGCCGCTGCCTACACTGTCATTGGTGGGGTCAATAGCAAGATGGGCTCTTCATTTTTCCTCATATTGAACCTAATCTACATTGTGTTCACGGTCATGGACATTGTTGCCCTTGCCACCGTGCTCAAGTCGGTGGTTTTGTTTTCATCGATTCTAACGTCATCGTTTAAGATCAAGGATTTTCCACATACGTTGCCGATGAAGCTCTCGATTGGATTCCAGTTGTTGTGTCTTCTCGGTGGCAAGTACGATGATGGCGTTTGCTTTGACGATTGTGTTGATGGTGAAGTCGGAGGAGATGAAATGAACGGTAAGTTTGTTGTATATGGCGACGTTTCTTTTGGTGACCATGTTTATAATAATTCGGCTGTCTTTTTTATGTGGAAGTGGTGAAGAATATTGGGAGTTATCGTCGCTATATTTCCAAGTTTCTTGCTCTATTTTGGAAACTTCCTTCCCAAATTTTGAGTAGGAAATTTGTTTGA AAATCCTTGGAGTCTTGTTCTGCTGCTGTGGTCCTCGTTTCGACTGTCTTCTTTGCCGCTGCCTACACTGTCATTGGTGGGGTCAATAGCAAGATGGGCTCTTCATTTTTCCTCATATTGAACCTAATCTACATTGTGTTCACGGTCATGGACATTGTTGCCCTTGCCACCGTGCTCAAGTCGGTGGTTTTGTTTTCATCGATTCTAACGTCATCGTTTAAGATCAAGGATTTTCCACATACGTTGCCGATGAAGCTCTCGATTGGATTCCAGTTGTTGTGTCTTCTCGGTGGCAAGTACGATGATGGCGTTTGCTTTGACGATTGTGTTGATGGTGAAGTCGGAGGAGATGAAATGAACGGTAAGTTTGTTGTATATGGCGACGTTTCTTTTGGTGACCATAAATCCTTGGAGTCTTGTTCTGCTGCTGTGGTCCTCGTTTCGACTGTCTTCTTTGCCGCTGCCTACACTGTCATTGGTGGGGTCAATAGCAAGATGGGCTCTTCATTTTTCCTCATATTGAACCTAATCTACATTGTGTTCACGGTCATGGACATTGTTGCCCTTGCCACCGTGCTCAAGTCGGTGGTTTTGTTTTCATCGATTCTAACGTCATCGTTTAAGATCAAGGATTTTCCACATACGTTGCCGATGAAGCTCTCGATTGGATTCCAGTTGTTGTGTCTTCTCGGTGGCAAGTACGATGATGGCGTTTGCTTTGACGATTGTGTTGATGGTGAAGTCGGAGGAGATGAAATGAACGGTAAGTTTGTTGTATATGGCGACGTTTCTTTTGGTGACCATAATATTGGGAGTTATCGTCGCTATATTTCCAAGTTTCTTGCTCTATTTTGGAAACTTCCTTCCCAAATTTTGAGTAGGAAATTTGTTTGA AAATCCTTGGAGTCTTGTTCTGCTGCTGTGGTCCTCGTTTCGACTGTCTTCTTTGCCGCTGCCTACACTGTCATTGGTGGGGTCAATAGCAAGATGGGCTCTTCATTTTTCCTCATATTGAACCTAATCTACATTGTGTTCACGGTCATGGACATTGTTGCCCTTGCCACCGTGCTCAAGTCGGTGGTTTTGTTTTCATCGATTCTAACGTCATCGTTTAAGATCAAGGATTTTCCACATACGTTGCCGATGAAGCTCTCGATTGGATTCCAGTTGTTGTGTCTTCTCGGTGGCAAGTACGATGATGGCGTTTGCTTTGACGATTGTGTTGATGGTGAAGTCGGAGGAGATGAAATGAACGGTAAGTTTGTTGTATATGGCGACGTTTCTTTTGGTGACCATAAATCCTTGGAGTCTTGTTCTGCTGCTGTGGTCCTCGTTTCGACTGTCTTCTTTGCCGCTGCCTACACTGTCATTGGTGGGGTCAATAGCAAGATGGGCTCTTCATTTTTCCTCATATTGAACCTAATCTACATTGTGTTCACGGTCATGGACATTGTTGCCCTTGCCACCGTGCTCAAGTCGGTGGTTTTGTTTTCATCGATTCTAACGTCATCGTTTAAGATCAAGGATTTTCCACATACGTTGCCGATGAAGCTCTCGATTGGATTCCAGTTGTTGTGTCTTCTCGGTGGCAAGTACGATGATGGCGTTTGCTTTGACGATTGTGTTGATGGTGAAGTCGGAGGAGATGAAATGAACGGTAAGTTTGTTGTATATGGCGACGTTTCTTTTGGTGACCATAATATTGGGAGTTATCGTCGCTATATTTCCAAGTTTCTTGCTCTATTTTGGAAACTTCCTTCCCAAATTTTGAGTAGGAAATTTGTTTGA KSLESCSAAVVLVSTVFFAAAYTVIGGVNSKMGSSFFLILNLIYIVFTVMDIVALATVLKSVVLFSSILTSSFKIKDFPHTLPMKLSIGFQLLCLLGGKYDDGVCFDDCVDGEVGGDEMNGKFVVYGDVSFGDHKSLESCSAAVVLVSTVFFAAAYTVIGGVNSKMGSSFFLILNLIYIVFTVMDIVALATVLKSVVLFSSILTSSFKIKDFPHTLPMKLSIGFQLLCLLGGKYDDGVCFDDCVDGEVGGDEMNGKFVVYGDVSFGDHNIGSYRRYISKFLALFWKLPSQILSRKFV
BLAST of ClCG01G009720 vs. TrEMBL
Match: A0A0A0M0P8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701200 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 4.2e-19 Identity = 55/90 (61.11%), Postives = 68/90 (75.56%), Query Frame = 1
BLAST of ClCG01G009720 vs. TrEMBL
Match: A0A0A0M0P8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701200 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 4.2e-19 Identity = 55/90 (61.11%), Postives = 68/90 (75.56%), Query Frame = 1
HSP 2 Score: 95.5 bits (236), Expect = 1.2e-16 Identity = 52/90 (57.78%), Postives = 66/90 (73.33%), Query Frame = 1
BLAST of ClCG01G009720 vs. TrEMBL
Match: U5FPZ2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05710g PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 1.2e-16 Identity = 52/90 (57.78%), Postives = 66/90 (73.33%), Query Frame = 1
HSP 2 Score: 95.1 bits (235), Expect = 1.5e-16 Identity = 50/93 (53.76%), Postives = 68/93 (73.12%), Query Frame = 1
BLAST of ClCG01G009720 vs. TrEMBL
Match: U5GHE1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s00520g PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 1.5e-16 Identity = 50/93 (53.76%), Postives = 68/93 (73.12%), Query Frame = 1
HSP 2 Score: 92.8 bits (229), Expect = 7.5e-16 Identity = 50/93 (53.76%), Postives = 68/93 (73.12%), Query Frame = 1
BLAST of ClCG01G009720 vs. TrEMBL
Match: U5FSA5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s05700g PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 7.5e-16 Identity = 50/93 (53.76%), Postives = 68/93 (73.12%), Query Frame = 1
HSP 2 Score: 90.5 bits (223), Expect = 3.7e-15 Identity = 49/92 (53.26%), Postives = 59/92 (64.13%), Query Frame = 1
BLAST of ClCG01G009720 vs. TAIR10
Match: AT5G04690.1 (AT5G04690.1 Ankyrin repeat family protein) HSP 1 Score: 59.3 bits (142), Expect = 4.6e-09 Identity = 31/89 (34.83%), Postives = 44/89 (49.44%), Query Frame = 1
HSP 2 Score: 59.3 bits (142), Expect = 4.6e-09 Identity = 31/89 (34.83%), Postives = 44/89 (49.44%), Query Frame = 1
BLAST of ClCG01G009720 vs. TAIR10
Match: AT3G54070.1 (AT3G54070.1 Ankyrin repeat family protein) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-08 Identity = 35/95 (36.84%), Postives = 49/95 (51.58%), Query Frame = 1
HSP 2 Score: 57.8 bits (138), Expect = 1.3e-08 Identity = 35/95 (36.84%), Postives = 49/95 (51.58%), Query Frame = 1
BLAST of ClCG01G009720 vs. TAIR10
Match: AT5G04730.1 (AT5G04730.1 Ankyrin-repeat containing protein) HSP 1 Score: 57.0 bits (136), Expect = 2.3e-08 Identity = 36/90 (40.00%), Postives = 49/90 (54.44%), Query Frame = 1
HSP 2 Score: 57.0 bits (136), Expect = 2.3e-08 Identity = 36/90 (40.00%), Postives = 49/90 (54.44%), Query Frame = 1
BLAST of ClCG01G009720 vs. TAIR10
Match: AT3G18670.1 (AT3G18670.1 Ankyrin repeat family protein) HSP 1 Score: 53.9 bits (128), Expect = 1.9e-07 Identity = 30/91 (32.97%), Postives = 51/91 (56.04%), Query Frame = 1
HSP 2 Score: 53.9 bits (128), Expect = 1.9e-07 Identity = 30/91 (32.97%), Postives = 51/91 (56.04%), Query Frame = 1
BLAST of ClCG01G009720 vs. TAIR10
Match: AT5G35810.1 (AT5G35810.1 Ankyrin repeat family protein) HSP 1 Score: 51.6 bits (122), Expect = 9.6e-07 Identity = 34/94 (36.17%), Postives = 49/94 (52.13%), Query Frame = 1
HSP 2 Score: 51.6 bits (122), Expect = 9.6e-07 Identity = 34/94 (36.17%), Postives = 49/94 (52.13%), Query Frame = 1
BLAST of ClCG01G009720 vs. NCBI nr
Match: gi|778665441|ref|XP_011648561.1| (PREDICTED: uncharacterized protein LOC101203890 [Cucumis sativus]) HSP 1 Score: 134.8 bits (338), Expect = 2.5e-28 Identity = 94/184 (51.09%), Postives = 109/184 (59.24%), Query Frame = 1
BLAST of ClCG01G009720 vs. NCBI nr
Match: gi|778665441|ref|XP_011648561.1| (PREDICTED: uncharacterized protein LOC101203890 [Cucumis sativus]) HSP 1 Score: 126.3 bits (316), Expect = 8.7e-26 Identity = 69/93 (74.19%), Postives = 77/93 (82.80%), Query Frame = 1
HSP 2 Score: 133.3 bits (334), Expect = 7.1e-28 Identity = 92/185 (49.73%), Postives = 110/185 (59.46%), Query Frame = 1
BLAST of ClCG01G009720 vs. NCBI nr
Match: gi|659118462|ref|XP_008459132.1| (PREDICTED: uncharacterized protein LOC103498332 [Cucumis melo]) HSP 1 Score: 122.5 bits (306), Expect = 1.3e-24 Identity = 67/93 (72.04%), Postives = 76/93 (81.72%), Query Frame = 1
HSP 2 Score: 111.3 bits (277), Expect = 2.9e-21 Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 1
BLAST of ClCG01G009720 vs. NCBI nr
Match: gi|778665435|ref|XP_011648558.1| (PREDICTED: uncharacterized protein LOC105434529 [Cucumis sativus]) HSP 1 Score: 111.3 bits (277), Expect = 2.9e-21 Identity = 60/93 (64.52%), Postives = 72/93 (77.42%), Query Frame = 1
HSP 2 Score: 103.6 bits (257), Expect = 6.1e-19 Identity = 55/90 (61.11%), Postives = 68/90 (75.56%), Query Frame = 1
BLAST of ClCG01G009720 vs. NCBI nr
Match: gi|700211748|gb|KGN66844.1| (hypothetical protein Csa_1G701200 [Cucumis sativus]) HSP 1 Score: 103.6 bits (257), Expect = 6.1e-19 Identity = 55/90 (61.11%), Postives = 68/90 (75.56%), Query Frame = 1
HSP 2 Score: 103.6 bits (257), Expect = 6.1e-19 Identity = 55/90 (61.11%), Postives = 68/90 (75.56%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|