ClCG01G009350 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTACCACCATAACAACAACCGAGAGCCCCGCCGGCCGTCAAACTCAGAGAAACCAAAGTAACCCTCCTGCCGCCAATAGAAGTGAAGGAATCCATCCGGTTGATAGCAATGGCCGCAAAAGATGCAGAGCAAGTCTTGGACGTGCAGTCGGTTGTCGAAGCAGTAGTTGCAAACGAAGACGCCGATGTTCCTAGCTACGAAGTAGAAAGCCTCTGCATGCGTTGCGGCGAAAACGTATTAGCTTTATTCCTGCTCTTCAACTTCTCGCAATTCTCTCCCTCACAATTACAAAATTCTGTTTCTGTTTCCGCCGCATTCAGCAGCTTAATTCGAATCTTGATTTGTGACTGCCTGGTTTTTAGTTAGGAGAGAGAAGTTTGAGAATCCTCTGGTTTATTACCTTAAAACTAAATATATCTGTGGTTTTCAGTGTCGTTTTGATGTGTTTCAGTTATGTTTCTAACTCGTTATGTTCTCTGCATTGCATTTGCAGGGGACAACAAGATTTTTATTAACTTTAATTCCGCACTTCAGAAAGGTAATATTCTAATTTTTACACGTTTTCAATTAGTGTTTGGTCGTCTTTTTGAAGCCTTAATGAGACATGAATCTTACTGCAGATCTTGTTGTCAGCCTTTGAATGTCTACATTGTGGTGAGAGGTAATATGTTACTTATGAAATTCTCTTGGGGAATATGGTGGTTTCAACATCATGTGATAATTGATTTTGAGTAGCCTCGGGTTTCTTTCAGGAACAATGAAGTCCAGTTTGCTGGTGAGATCCAGCCACGAGGCTGTTGCTACTGTTTGGAGGTTCATGCAGGCGACCAGAAGGTTATTTTGATGGAACTAAATCATGTTTGCGGGATTCACTTCCGTTTCACTGTATATGTTTTCCTGAGGAGGCTTAGAAGCAGCTACAACCCAATATTTTAAGCATTAATGAGATACTATTTATCTGCTTATTGTCTCAATGATTTCTTCTAGTTATTATTTTGGTTCATAAGATTATTTTTAAAGAGGTATTTTAATCCCGAAGAAGGAGAAGGCTAACAAGGTTAAGGATTTTGAGCTTACCAGTCTTATCAACAATGTCTATAAATTCTTGTTAAAGTTCTGGCTAACCGTTTGGAAAGAGTACCCCATCAATGATTTATGAGTCATAAGGGGCTTTTATTGTGGGGAGGTAGACTTTGGACCATACCAATGAAGTGAGCAAGGATTATAGAATAAAAAAGAAAGCAGTGATTTTTAAAATTGACTTCAAGAAAAGCTTGGATTAGGTTCTGGATAAGAAGAGCTTTGGGTATAAATGGAAGATGTGTATGTGGATGTGGAGTTGCATGAGAAATGTGAATCTTTATTTCCTCATTAACAAAAGCCCTAGGGGTAAAGTTTTAGCCATGAAAGGTCTTGGGCAGGGTGACCCTTTATCCCCCTTTGTATTCTTGCTTATGGTGGATGTTCTAAGCTAGATCACTTCTAAATATGTTTATGGTAAAATCCTTGAGCCATTTGAGGTTGAAGAAGAGAGGGTGACTCTTTCCCACCCTCAATTTTCGATGACTTCTTTTTATTTTTTTATTTTTTTATTTTTTTATTTTTTATTTTTTACAGATATGGTAGTGATACAATCTTCTGGATTATGTTAGCAAGGCTAATAACAAAATTTTTATTTTTTATTTTTTAAAATTTTTATTTTAAGTGAGGATTCATTTTTAATTTTGAATCACATCCTGACGTTTGTTTGAAGGGATGTCCTGGCTGAAGATTAATAGGAGCAAATGCTAGGTATTGTGCTCAACTGTGACGATGAGAAAGTTAGGAGGTGGGTGGATATGGTGGGTTGTCAAGTTGGTTTTCTTCCTTATCATGGTCTGACTCTTGGAAGAAATCCCAAATCTTTAATTTTTTGGACTCTTGTGGTGGATAAAGGTAGGAAAAGACTTGCCTCTTAGAAAAAAAGATTTCTTCTCTAAAATAGGAAGTCCTACGTTGATTCGTTTAGTTATGAGTGCTAAATGGTTCCCTATTTATCTTTTCTCCCTTTTTAAAGCTCTGAGTGGAGATTGTAAGAACGTTGAGAAGCTTATGCACAATTTGCATTGGGAAGGGATCAAAGAAGGAGAAGGGAAAGGGGCGCACTTGGTCAAATGTGAGATGATTGGGAGGTTGATTACCTGGGAGTTAGAAATTGGGAATCTAAGGTATCGTAACAAACCACTGTTGGCCAAATGGCTTTGGCATCTCTCCTTGAAGCCCAACTCTCTTTGGCATAGGATTATTGCTAGTAAGTAGTAAGTTTAGTCCTCATCCTTTTGGGTGGTTATTGGGGGAGGGGTAAAGGCTCATATTCAAACTTATGGAAGGAAGAAATTTCTAAGGAGCTCTCCAGTCTTTTGCTCATCTGGTCTATTGTGTGGTGAGGGGGTGGGGAAAGAAAAACACACCCACACACATATATGTATATATTTGTGGAGGATTGGGGGTGGGGGATAAGCCCCTATGCTATACGTTTTTGGTTGGGGAGTTCTTTTTTTCTCCTTGTTCGAGTTTAGTTGTTCTTTATCCAACAAGGAAGCAGTGAATTTTGTGTCACTTCTCCTGAGGAGTACAACTTTAGGTTGGGGAGAAATGATATGTAGGCATGGAATCCCAACCCTTCGAAGGGATTCTTGTGTAAATCCTTTTTCAATAGTTTGATAGACCGTCCTCCCTTGGGTGAGTTGGTTTTCTTTGTTCTTTGGAGAATAAGATCTCGAGGAAAGTGAAGATTTTTTTCCTGGCAAGTTTTACATGGTTGTGTTAACACGATGGATCAACTTGCGAGGAAGATGCCTTCGTTAGTTGGGTCATTTTGTTGTATTCTCTGTTGGAAGGTGAAGGAAGACTTGGACCATATTCTCTGGAGATGCAAGTTTGGGAGATCCGTTTTAGAGAACTTCTTTTAGATGTTTGGGTTCTTGCTTGCTTAGCACAGAGACATGAGTGATATGTTTGGAGAGTTCCTCCTCCATCCGACCCTTAGAGACAAGGGTGGTTTTTTATGGCTAGTTGGGGTTCAGAAGAGTAGTAAGATGTCATTACATTTAGCACCTCTTCATAGGCGTTAGTCAATAGGACCTTTTGCAATTATCAACCATGTCTTGCTATTTTGGATTGGAGGGCCTTTTTTAACTAGTTTCTGCACCCCTTTTGTGGAGTTGGCTGTATTTTATTTCCCTTAATGTTTTTGTGCCCTTGTATACAAATTCAATTCTCTTCTCTCGATGAATTCTTGGTTTCTTTTGCAAACAATGTTGCAGAAATATTCTGAGGTTTGAAAATACCTTTTTCTCAATCTTAGGCCATTGTTTCTTAATCTGTGCTTAATATTGGATATTATGTTCCATGTTCAAAGTTGCATGTTTTTGTGAGTTTACTCTGAGTTCTAGTTTGGTCATTACTTATGCAGATGCTCAATCGACAAGTGGTAAAATCTGAATCTGCCATTATTAAGGTACTACATGCTGTGTTACACCTATATGTGTAACAATGAATAGACAATGAGTTCCTATTCTTTTAAGGTGTCTAACTCTGCCTGTGCTGGCCCCTGTTAAGTAGATAACATATTGATATTCAACATTGTTTGGACGTGTTTCAATTTTTGTGAAAGAAAACCTAATCTATTCAGTAATTTGGTAAAACAACTTTCTCTTGCTGTATAATCTGAGAAGCTTTTCAGAATTATTCTAATGCTTCCACTTTTCCTTTTGTGTATTAGCTTGGAACTGCAATATTTTATAATTAGTTTATATTTTAAATAAGGTTAATGATTGCATTTGAAAAACTACTTTAGAAAACAATGAAAACAATAAAAAGATACAATTACAAAGATGTCAAGATGTTTGGGGATTCGTGGCTTGGGTTCAAAGATGTTTTAGACAACATAGTTGATTGCTCTAACTAGAATAGATACACTCTCGAACTTTTTAGTAATATTTTTCAGCTATATAACCATAATTATATATTTGTTGAGCAGATCCCAGAATTGGATTTTGAGATTCCAGCAGAGGCTCAACGTGGAACTCTATCAACT GTACCACCATAACAACAACCGAGAGCCCCGCCGGCCGTCAAACTCAGAGAAACCAAAGTAACCCTCCTGCCGCCAATAGAAGTGAAGGAATCCATCCGGTTGATAGCAATGGCCGCAAAAGATGCAGAGCAAGTCTTGGACGTGCAGTCGGTTGTCGAAGCAGTAGTTGCAAACGAAGACGCCGATGTTCCTAGCTACGAAGTAGAAAGCCTCTGCATGCGTTGCGGCGAAAACGGGACAACAAGATTTTTATTAACTTTAATTCCGCACTTCAGAAAGATCTTGTTGTCAGCCTTTGAATGTCTACATTGTGGTGAGAGGAACAATGAAGTCCAGTTTGCTGGTGAGATCCAGCCACGAGGCTGTTGCTACTGTTTGGAGGTTCATGCAGGCGACCAGAAGATGCTCAATCGACAAGTGGTAAAATCTGAATCTGCCATTATTAAGATCCCAGAATTGGATTTTGAGATTCCAGCAGAGGCTCAACGTGGAACTCTATCAACT ATGGCCGCAAAAGATGCAGAGCAAGTCTTGGACGTGCAGTCGGTTGTCGAAGCAGTAGTTGCAAACGAAGACGCCGATGTTCCTAGCTACGAAGTAGAAAGCCTCTGCATGCGTTGCGGCGAAAACGGGACAACAAGATTTTTATTAACTTTAATTCCGCACTTCAGAAAGATCTTGTTGTCAGCCTTTGAATGTCTACATTGTGGTGAGAGGAACAATGAAGTCCAGTTTGCTGGTGAGATCCAGCCACGAGGCTGTTGCTACTGTTTGGAGGTTCATGCAGGCGACCAGAAGATGCTCAATCGACAAGTGGTAAAATCTGAATCTGCCATTATTAAGATCCCAGAATTGGATTTTGAGATTCCAGCAGAGGCTCAACGTGGAACTCTATCAACT MAAKDAEQVLDVQSVVEAVVANEDADVPSYEVESLCMRCGENGTTRFLLTLIPHFRKILLSAFECLHCGERNNEVQFAGEIQPRGCCYCLEVHAGDQKMLNRQVVKSESAIIKIPELDFEIPAEAQRGTLST
BLAST of ClCG01G009350 vs. Swiss-Prot
Match: ZPR1_MOUSE (Zinc finger protein ZPR1 OS=Mus musculus GN=Zpr1 PE=1 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 4.6e-27 Identity = 61/110 (55.45%), Postives = 77/110 (70.00%), Query Frame = 1
HSP 2 Score: 70.9 bits (172), Expect = 1.2e-11 Identity = 36/116 (31.03%), Postives = 56/116 (48.28%), Query Frame = 1
BLAST of ClCG01G009350 vs. Swiss-Prot
Match: ZPR1_BOVIN (Zinc finger protein ZPR1 OS=Bos taurus GN=ZNF259 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.3e-26 Identity = 60/113 (53.10%), Postives = 78/113 (69.03%), Query Frame = 1
HSP 2 Score: 70.9 bits (172), Expect = 1.2e-11 Identity = 39/127 (30.71%), Postives = 62/127 (48.82%), Query Frame = 1
BLAST of ClCG01G009350 vs. Swiss-Prot
Match: ZPR1_HUMAN (Zinc finger protein ZPR1 OS=Homo sapiens GN=ZPR1 PE=1 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.1e-26 Identity = 60/113 (53.10%), Postives = 77/113 (68.14%), Query Frame = 1
HSP 2 Score: 71.2 bits (173), Expect = 9.3e-12 Identity = 39/130 (30.00%), Postives = 63/130 (48.46%), Query Frame = 1
BLAST of ClCG01G009350 vs. Swiss-Prot
Match: ZPR1_PAPAN (Zinc finger protein ZPR1 OS=Papio anubis GN=ZNF259 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.1e-26 Identity = 59/113 (52.21%), Postives = 77/113 (68.14%), Query Frame = 1
HSP 2 Score: 70.5 bits (171), Expect = 1.6e-11 Identity = 33/97 (34.02%), Postives = 51/97 (52.58%), Query Frame = 1
BLAST of ClCG01G009350 vs. Swiss-Prot
Match: ZPR1_YEAST (Zinc finger protein ZPR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ZPR1 PE=1 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 2.8e-24 Identity = 62/137 (45.26%), Postives = 85/137 (62.04%), Query Frame = 1
HSP 2 Score: 58.2 bits (139), Expect = 8.1e-08 Identity = 32/95 (33.68%), Postives = 50/95 (52.63%), Query Frame = 1
BLAST of ClCG01G009350 vs. TrEMBL
Match: A0A0A0LYE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G707650 PE=4 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 1.0e-65 Identity = 129/133 (96.99%), Postives = 130/133 (97.74%), Query Frame = 1
BLAST of ClCG01G009350 vs. TrEMBL
Match: A0A0A0LYE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G707650 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.1e-06 Identity = 32/99 (32.32%), Postives = 59/99 (59.60%), Query Frame = 1
HSP 2 Score: 214.2 bits (544), Expect = 9.9e-53 Identity = 104/128 (81.25%), Postives = 115/128 (89.84%), Query Frame = 1
BLAST of ClCG01G009350 vs. TrEMBL
Match: W9SBI9_9ROSA (Zinc finger protein OS=Morus notabilis GN=L484_018464 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.2e-05 Identity = 31/81 (38.27%), Postives = 50/81 (61.73%), Query Frame = 1
HSP 2 Score: 213.8 bits (543), Expect = 1.3e-52 Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 1
BLAST of ClCG01G009350 vs. TrEMBL
Match: B9H3J7_POPTR (Zinc finger family protein OS=Populus trichocarpa GN=POPTR_0004s07410g PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.3e-08 Identity = 35/99 (35.35%), Postives = 58/99 (58.59%), Query Frame = 1
HSP 2 Score: 211.5 bits (537), Expect = 6.4e-52 Identity = 100/131 (76.34%), Postives = 116/131 (88.55%), Query Frame = 1
BLAST of ClCG01G009350 vs. TrEMBL
Match: A0A067KU25_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10522 PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 3.9e-09 Identity = 35/99 (35.35%), Postives = 59/99 (59.60%), Query Frame = 1
HSP 2 Score: 209.9 bits (533), Expect = 1.9e-51 Identity = 104/133 (78.20%), Postives = 115/133 (86.47%), Query Frame = 1
BLAST of ClCG01G009350 vs. TAIR10
Match: AT5G22480.1 (AT5G22480.1 ZPR1 zinc-finger domain protein) HSP 1 Score: 200.3 bits (508), Expect = 7.5e-52 Identity = 99/126 (78.57%), Postives = 107/126 (84.92%), Query Frame = 1
HSP 2 Score: 62.4 bits (150), Expect = 2.4e-10 Identity = 36/99 (36.36%), Postives = 54/99 (54.55%), Query Frame = 1
BLAST of ClCG01G009350 vs. TAIR10
Match: AT5G37340.2 (AT5G37340.2 ZPR1 zinc-finger domain protein) HSP 1 Score: 197.6 bits (501), Expect = 4.8e-51 Identity = 98/126 (77.78%), Postives = 104/126 (82.54%), Query Frame = 1
HSP 2 Score: 49.3 bits (116), Expect = 2.1e-06 Identity = 34/104 (32.69%), Postives = 51/104 (49.04%), Query Frame = 1
BLAST of ClCG01G009350 vs. NCBI nr
Match: gi|778664613|ref|XP_004145481.2| (PREDICTED: zinc finger protein ZPR1-like [Cucumis sativus]) HSP 1 Score: 257.3 bits (656), Expect = 1.5e-65 Identity = 129/133 (96.99%), Postives = 130/133 (97.74%), Query Frame = 1
BLAST of ClCG01G009350 vs. NCBI nr
Match: gi|778664613|ref|XP_004145481.2| (PREDICTED: zinc finger protein ZPR1-like [Cucumis sativus]) HSP 1 Score: 61.2 bits (147), Expect = 1.5e-06 Identity = 32/99 (32.32%), Postives = 59/99 (59.60%), Query Frame = 1
HSP 2 Score: 255.0 bits (650), Expect = 7.2e-65 Identity = 128/133 (96.24%), Postives = 129/133 (96.99%), Query Frame = 1
BLAST of ClCG01G009350 vs. NCBI nr
Match: gi|659118316|ref|XP_008459058.1| (PREDICTED: zinc finger protein ZPR1-like isoform X1 [Cucumis melo]) HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06 Identity = 32/99 (32.32%), Postives = 58/99 (58.59%), Query Frame = 1
HSP 2 Score: 255.0 bits (650), Expect = 7.2e-65 Identity = 128/133 (96.24%), Postives = 129/133 (96.99%), Query Frame = 1
BLAST of ClCG01G009350 vs. NCBI nr
Match: gi|659118318|ref|XP_008459059.1| (PREDICTED: zinc finger protein ZPR1-like isoform X2 [Cucumis melo]) HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06 Identity = 32/99 (32.32%), Postives = 58/99 (58.59%), Query Frame = 1
HSP 2 Score: 214.2 bits (544), Expect = 1.4e-52 Identity = 104/128 (81.25%), Postives = 115/128 (89.84%), Query Frame = 1
BLAST of ClCG01G009350 vs. NCBI nr
Match: gi|703150233|ref|XP_010109807.1| (Zinc finger protein [Morus notabilis]) HSP 1 Score: 57.8 bits (138), Expect = 1.7e-05 Identity = 31/81 (38.27%), Postives = 50/81 (61.73%), Query Frame = 1
HSP 2 Score: 213.8 bits (543), Expect = 1.8e-52 Identity = 105/128 (82.03%), Postives = 115/128 (89.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |