ClCG01G009330 (gene) Watermelon (Charleston Gray)

NameClCG01G009330
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionZinc finger protein ZPR1
LocationCG_Chr01 : 12838424 .. 12840211 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCGGGTGTGTGTGCTGATCTCCCTATCTTGTCTTACAGTTTGCTTGGATTATTATGTTTCTTTGTTTTTCATTATATTAAACAAAAGTTTGTTTCTCTTCAATATATATCAGTAATTGTTGGATATAGTTTCAATCATTGGTAAAAAAGTTCATATTGAGTAAAATTCTTAAGCGAATCNAAAAAAAAAAAGTCCCATCTCCTGAGCTAATCTAATTGGATTCTCTAGAAGAGAACATCTAAAAGAGAAAGAAGAAGAAGAAGGGAACGGAGGGGAGGGAGATGGAAAATAAACAAAACATGCCACCTTATTTTTCTGTATGGTCAAATTAACGCTAGGGACCATTTAGAACTATTTTTCAAAACTTGGGGACCAAATAGACACTACCCTTAAACCTCCGGGACCAAAAGTGTAATTTATCCTAAATTTTATTGTCTTGTTAATTTACATGTATGATGTAGCTTCCTCGTCAATTTTCATGCATCATTCTAAAGAATAAAAAACCCATGAGGTGTAGATTTAGAGAAATTTCAAAGTGCTTTTCAAAGATCTGAAACCTATCACAAGTCAGTTAACCAAACAGTTTTGAAGTCCATCTGTATAGCTGACAAACTTCAATCAACAATCAAGAAAACTTAGTAGTTTCAGTTTGTGGACGAAAATGCTCCTACAACGAAATCAGTTCTAGAGATATAATTTGAGCCATTCTCTGCAGTATTTATTTTAACAAATTTAAGTACTAAGCTACATTATTTTCCATGTTTTGTGTATATTCACTAATCTTCTGGGTCGTTTTTCTTCTAATTTCTCTTATTGTAGCTCTTGAGTTTGGAACAGCCTTGGACTCTCATCCTTGATGATGCACTAGCTAATTCGTTTATTGCACCAGTGACTGATGATATGAAAGATGACCATCAGTTAACATGTAAGTGACTTTCCCTACCTTCTTCTTTTTTTCAAATTCTGATTCAAAATAACAATTGGAAACTAGTAATATATATTTTAAGCATCCAACCTAATAATGAATTTAGAACTCCATTGTAATTTGTAACTCTGCCCGTGCTACAAGTATTTCAAACTGTGAAATGTCAGATAGTTTATAGGTTCAATCAAGCAGTTATAATTTTTTGGTTTAGAGTTGTGCAGTATCATTTTTTTTTCTCTCTCTCTCTCTCTCTCTCTCTATCGGGTCCGCCTGACCTTGGGTGGGTTTGGGTGCCCCCCCGTCTAGGAAAGCAAAGTGTCGACCCCGGTTAACTTATATATATATGTATAAGAACATTTTAAAGTAGAGTAAGAAAACATGACTAGTACATAAAGAAGAAAGTTATTACAAAAGAGAACTTGGATTTGATTTAGTTTTCTTCTTGTGGATACTTACTTTTGGTTCTGTTCACAGGCGAGGAATACGAGAGATCCTGGGAACAGAATGAGGAACTTGGTTTGAACGACATGGACACTTCGGCCGCTGATGCTGCATATAATTAACTAATCAAAAGAATGCTGCTACATTAGAGAACATAGAAAGCTTCAACACAATCAGAGATTTCAGGTATCCGAAGAGGTTGATTCCCGGGTTATAGGTTGACTTTATAAACTTATAGGTATCAAATTTTCTTCCATTGTTGTATCTTATATTTATTCCTAATGCAAGTGTATCCACAATTTAGGCCATGTTCAATGTGTTTACACCAGCGCTGAACAAACTCAAACAAATGAGGGGTCTCTTTTGGCTTGATTTTGGACCTTTGTTCCTAAATTAATCTTAATTCCACCTGGATCTT

mRNA sequence

ATGGTCGGGTGTCTCTTGAGTTTGGAACAGCCTTGGACTCTCATCCTTGATGATGCACTAGCTAATTCGTTTATTGCACCAGTGACTGATGATATGAAAGATGACCATCAGTTAACATGCGAGGAATACGAGAGATCCTGGGAACAGAATGAGGAACTTGGTTTGAACGACATGGACACTTCGGCCGCTGATGCTGCATATAATTAACTAATCAAAAGAATGCTGCTACATTAGAGAACATAGAAAGCTTCAACACAATCAGAGATTTCAGGTATCCGAAGAGGTTGATTCCCGGGTTATAGGTTGACTTTATAAACTTATAGGTATCAAATTTTCTTCCATTGTTGTATCTTATATTTATTCCTAATGCAAGTGTATCCACAATTTAGGCCATGTTCAATGTGTTTACACCAGCGCTGAACAAACTCAAACAAATGAGGGGTCTCTTTTGGCTTGATTTTGGACCTTTGTTCCTAAATTAATCTTAATTCCACCTGGATCTT

Coding sequence (CDS)

ATGGTCGGGTGTCTCTTGAGTTTGGAACAGCCTTGGACTCTCATCCTTGATGATGCACTAGCTAATTCGTTTATTGCACCAGTGACTGATGATATGAAAGATGACCATCAGTTAACATGCGAGGAATACGAGAGATCCTGGGAACAGAATGAGGAACTTGGTTTGAACGACATGGACACTTCGGCCGCTGATGCTGCATATAATTAA

Protein sequence

MVGCLLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDTSAADAAYN
BLAST of ClCG01G009330 vs. Swiss-Prot
Match: ZPR1_CAEEL (Zinc finger protein ZPR1 homolog OS=Caenorhabditis elegans GN=W03F9.1 PE=3 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 3.9e-06
Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 1

Query: 5   LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDM 59
           +++L  P T+ILDD    S++  +T  M DD +LT E Y R++EQN+ELG+NDM
Sbjct: 383 IIALRLPATIILDDPTGCSYVQSLTAPM-DDPRLTKEFYTRTYEQNDELGINDM 435

BLAST of ClCG01G009330 vs. Swiss-Prot
Match: ZPR1_DICDI (Zinc finger protein ZPR1 homolog OS=Dictyostelium discoideum GN=zpr1 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 5.1e-06
Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 1

Query: 9   EQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDT 61
           ++P+T+ LDD ++NS+I  +     DD QL   EYER++EQN+ELGLN M+T
Sbjct: 400 KKPFTIELDDPISNSYIQNLFAP-DDDPQLKIVEYERTYEQNDELGLNAMNT 450


HSP 2 Score: 36.2 bits (82), Expect = 1.7e-01
Identity = 21/51 (41.18%), Postives = 27/51 (52.94%), Query Frame = 1

Query: 5   LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGL 56
           LL +++P+ +I+DD   NSFI    +  K D  L    Y R+ EQN  LGL
Sbjct: 168 LLMVDEPFKIIVDDPSGNSFIEN-PNAPKADTNLKVTNYTRTAEQNASLGL 217

BLAST of ClCG01G009330 vs. TrEMBL
Match: A0A0A0LYE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G707650 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.8e-27
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 1

Query: 5   LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDTSAAD 64
           LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLT EEYERSWEQNEELGLNDMDTSAAD
Sbjct: 428 LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTFEEYERSWEQNEELGLNDMDTSAAD 487

Query: 65  AAY 68
           AAY
Sbjct: 488 AAY 490

BLAST of ClCG01G009330 vs. TrEMBL
Match: D7T9K7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g01690 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.3e-26
Identity = 57/64 (89.06%), Postives = 62/64 (96.88%), Query Frame = 1

Query: 5   LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDTSAAD 64
           LLSLE+PWTLI+DDALANSF+AP TDD+KDDHQLT EEYERSWEQNEELGLNDMDTS+AD
Sbjct: 426 LLSLEEPWTLIIDDALANSFVAPTTDDIKDDHQLTFEEYERSWEQNEELGLNDMDTSSAD 485

Query: 65  AAYN 69
           AAYN
Sbjct: 486 AAYN 489

BLAST of ClCG01G009330 vs. TrEMBL
Match: V4LER7_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10013358mg PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.5e-25
Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 1

Query: 5   LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDTSAAD 64
           LLSLEQPWTLILDD LANSFI+PVTDDMKDDHQLT EEYERSWEQNEELGLND+DTS+AD
Sbjct: 422 LLSLEQPWTLILDDELANSFISPVTDDMKDDHQLTYEEYERSWEQNEELGLNDIDTSSAD 481

Query: 65  AAY 68
           AAY
Sbjct: 482 AAY 484

BLAST of ClCG01G009330 vs. TrEMBL
Match: A0A068VDV0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00011293001 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.4e-25
Identity = 56/64 (87.50%), Postives = 61/64 (95.31%), Query Frame = 1

Query: 5   LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDTSAAD 64
           LLSLE+PWTLI+DDALANSFIAP TDD+KDDHQL+ EEYERSWEQNEELGLNDMDTS+AD
Sbjct: 442 LLSLEEPWTLIIDDALANSFIAPATDDIKDDHQLSFEEYERSWEQNEELGLNDMDTSSAD 501

Query: 65  AAYN 69
            AYN
Sbjct: 502 VAYN 505

BLAST of ClCG01G009330 vs. TrEMBL
Match: A0A103YFG1_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_013508 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.4e-25
Identity = 56/64 (87.50%), Postives = 61/64 (95.31%), Query Frame = 1

Query: 5   LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDTSAAD 64
           LLSLE+PWTLI+DDALANSF+AP  DD+KDDHQLT EEYERSWEQNEELGLNDMDTSAAD
Sbjct: 425 LLSLEEPWTLIMDDALANSFVAPACDDIKDDHQLTIEEYERSWEQNEELGLNDMDTSAAD 484

Query: 65  AAYN 69
           AAY+
Sbjct: 485 AAYD 488

BLAST of ClCG01G009330 vs. TAIR10
Match: AT5G22480.1 (AT5G22480.1 ZPR1 zinc-finger domain protein)

HSP 1 Score: 119.8 bits (299), Expect = 6.6e-28
Identity = 56/63 (88.89%), Postives = 58/63 (92.06%), Query Frame = 1

Query: 5   LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDTSAAD 64
           LLS EQPWTLILDD LANSFIAPVTDD+KDDHQLT EEYERSW+QNEELGLND+DTS+AD
Sbjct: 422 LLSFEQPWTLILDDELANSFIAPVTDDIKDDHQLTFEEYERSWDQNEELGLNDIDTSSAD 481

Query: 65  AAY 68
           AAY
Sbjct: 482 AAY 484

BLAST of ClCG01G009330 vs. TAIR10
Match: AT5G37340.2 (AT5G37340.2 ZPR1 zinc-finger domain protein)

HSP 1 Score: 118.2 bits (295), Expect = 1.9e-27
Identity = 56/63 (88.89%), Postives = 58/63 (92.06%), Query Frame = 1

Query: 5   LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDTSAAD 64
           LLSLEQ WTLILDD LANSFI+PVTDD+KDDHQLT EEYERSWEQNEELGLND+DTS+AD
Sbjct: 427 LLSLEQEWTLILDDELANSFISPVTDDIKDDHQLTFEEYERSWEQNEELGLNDIDTSSAD 486

Query: 65  AAY 68
           AAY
Sbjct: 487 AAY 489

BLAST of ClCG01G009330 vs. NCBI nr
Match: gi|778664613|ref|XP_004145481.2| (PREDICTED: zinc finger protein ZPR1-like [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 4.0e-27
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 1

Query: 5   LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDTSAAD 64
           LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLT EEYERSWEQNEELGLNDMDTSAAD
Sbjct: 428 LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTFEEYERSWEQNEELGLNDMDTSAAD 487

Query: 65  AAY 68
           AAY
Sbjct: 488 AAY 490

BLAST of ClCG01G009330 vs. NCBI nr
Match: gi|659118316|ref|XP_008459058.1| (PREDICTED: zinc finger protein ZPR1-like isoform X1 [Cucumis melo])

HSP 1 Score: 128.6 bits (322), Expect = 4.0e-27
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 1

Query: 5   LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDTSAAD 64
           LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLT EEYERSWEQNEELGLNDMDTSAAD
Sbjct: 428 LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTFEEYERSWEQNEELGLNDMDTSAAD 487

Query: 65  AAY 68
           AAY
Sbjct: 488 AAY 490

BLAST of ClCG01G009330 vs. NCBI nr
Match: gi|225423682|ref|XP_002277005.1| (PREDICTED: zinc finger protein ZPR1 isoform X1 [Vitis vinifera])

HSP 1 Score: 124.4 bits (311), Expect = 7.6e-26
Identity = 57/64 (89.06%), Postives = 62/64 (96.88%), Query Frame = 1

Query: 5   LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDTSAAD 64
           LLSLE+PWTLI+DDALANSF+AP TDD+KDDHQLT EEYERSWEQNEELGLNDMDTS+AD
Sbjct: 426 LLSLEEPWTLIIDDALANSFVAPTTDDIKDDHQLTFEEYERSWEQNEELGLNDMDTSSAD 485

Query: 65  AAYN 69
           AAYN
Sbjct: 486 AAYN 489

BLAST of ClCG01G009330 vs. NCBI nr
Match: gi|731371327|ref|XP_010648803.1| (PREDICTED: zinc finger protein ZPR1 isoform X2 [Vitis vinifera])

HSP 1 Score: 122.9 bits (307), Expect = 2.2e-25
Identity = 56/64 (87.50%), Postives = 61/64 (95.31%), Query Frame = 1

Query: 5   LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDTSAAD 64
           LLSLE+PWTLI+DDALANSF+AP TDD+KDDHQLT EEYERSWEQNEELGLNDMDTS+AD
Sbjct: 426 LLSLEEPWTLIIDDALANSFVAPTTDDIKDDHQLTFEEYERSWEQNEELGLNDMDTSSAD 485

Query: 65  AAYN 69
           A YN
Sbjct: 486 AGYN 489

BLAST of ClCG01G009330 vs. NCBI nr
Match: gi|567176529|ref|XP_006400754.1| (hypothetical protein EUTSA_v10013358mg [Eutrema salsugineum])

HSP 1 Score: 122.9 bits (307), Expect = 2.2e-25
Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 1

Query: 5   LLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDTSAAD 64
           LLSLEQPWTLILDD LANSFI+PVTDDMKDDHQLT EEYERSWEQNEELGLND+DTS+AD
Sbjct: 422 LLSLEQPWTLILDDELANSFISPVTDDMKDDHQLTYEEYERSWEQNEELGLNDIDTSSAD 481

Query: 65  AAY 68
           AAY
Sbjct: 482 AAY 484

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
ZPR1_CAEEL3.9e-0648.15Zinc finger protein ZPR1 homolog OS=Caenorhabditis elegans GN=W03F9.1 PE=3 SV=2[more]
ZPR1_DICDI5.1e-0650.00Zinc finger protein ZPR1 homolog OS=Dictyostelium discoideum GN=zpr1 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LYE7_CUCSA2.8e-2798.41Uncharacterized protein OS=Cucumis sativus GN=Csa_1G707650 PE=4 SV=1[more]
D7T9K7_VITVI5.3e-2689.06Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g01690 PE=4 SV=... [more]
V4LER7_EUTSA1.5e-2592.06Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10013358mg PE=4 SV=1[more]
A0A068VDV0_COFCA3.4e-2587.50Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00011293001 PE=4 SV=1[more]
A0A103YFG1_CYNCS3.4e-2587.50Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_013508 PE=4 ... [more]
Match NameE-valueIdentityDescription
AT5G22480.16.6e-2888.89 ZPR1 zinc-finger domain protein[more]
AT5G37340.21.9e-2788.89 ZPR1 zinc-finger domain protein[more]
Match NameE-valueIdentityDescription
gi|778664613|ref|XP_004145481.2|4.0e-2798.41PREDICTED: zinc finger protein ZPR1-like [Cucumis sativus][more]
gi|659118316|ref|XP_008459058.1|4.0e-2798.41PREDICTED: zinc finger protein ZPR1-like isoform X1 [Cucumis melo][more]
gi|225423682|ref|XP_002277005.1|7.6e-2689.06PREDICTED: zinc finger protein ZPR1 isoform X1 [Vitis vinifera][more]
gi|731371327|ref|XP_010648803.1|2.2e-2587.50PREDICTED: zinc finger protein ZPR1 isoform X2 [Vitis vinifera][more]
gi|567176529|ref|XP_006400754.1|2.2e-2592.06hypothetical protein EUTSA_v10013358mg [Eutrema salsugineum][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G009330.1ClCG01G009330.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR10876ZINC FINGER PROTEIN ZPR1coord: 5..68
score: 1.6
NoneNo IPR availablePANTHERPTHR10876:SF0ZINC FINGER PROTEIN ZPR1coord: 5..68
score: 1.6

The following gene(s) are paralogous to this gene:

None