ClCG01G009330 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGGGTGTGTGTGCTGATCTCCCTATCTTGTCTTACAGTTTGCTTGGATTATTATGTTTCTTTGTTTTTCATTATATTAAACAAAAGTTTGTTTCTCTTCAATATATATCAGTAATTGTTGGATATAGTTTCAATCATTGGTAAAAAAGTTCATATTGAGTAAAATTCTTAAGCGAATCNAAAAAAAAAAAGTCCCATCTCCTGAGCTAATCTAATTGGATTCTCTAGAAGAGAACATCTAAAAGAGAAAGAAGAAGAAGAAGGGAACGGAGGGGAGGGAGATGGAAAATAAACAAAACATGCCACCTTATTTTTCTGTATGGTCAAATTAACGCTAGGGACCATTTAGAACTATTTTTCAAAACTTGGGGACCAAATAGACACTACCCTTAAACCTCCGGGACCAAAAGTGTAATTTATCCTAAATTTTATTGTCTTGTTAATTTACATGTATGATGTAGCTTCCTCGTCAATTTTCATGCATCATTCTAAAGAATAAAAAACCCATGAGGTGTAGATTTAGAGAAATTTCAAAGTGCTTTTCAAAGATCTGAAACCTATCACAAGTCAGTTAACCAAACAGTTTTGAAGTCCATCTGTATAGCTGACAAACTTCAATCAACAATCAAGAAAACTTAGTAGTTTCAGTTTGTGGACGAAAATGCTCCTACAACGAAATCAGTTCTAGAGATATAATTTGAGCCATTCTCTGCAGTATTTATTTTAACAAATTTAAGTACTAAGCTACATTATTTTCCATGTTTTGTGTATATTCACTAATCTTCTGGGTCGTTTTTCTTCTAATTTCTCTTATTGTAGCTCTTGAGTTTGGAACAGCCTTGGACTCTCATCCTTGATGATGCACTAGCTAATTCGTTTATTGCACCAGTGACTGATGATATGAAAGATGACCATCAGTTAACATGTAAGTGACTTTCCCTACCTTCTTCTTTTTTTCAAATTCTGATTCAAAATAACAATTGGAAACTAGTAATATATATTTTAAGCATCCAACCTAATAATGAATTTAGAACTCCATTGTAATTTGTAACTCTGCCCGTGCTACAAGTATTTCAAACTGTGAAATGTCAGATAGTTTATAGGTTCAATCAAGCAGTTATAATTTTTTGGTTTAGAGTTGTGCAGTATCATTTTTTTTTCTCTCTCTCTCTCTCTCTCTCTCTATCGGGTCCGCCTGACCTTGGGTGGGTTTGGGTGCCCCCCCGTCTAGGAAAGCAAAGTGTCGACCCCGGTTAACTTATATATATATGTATAAGAACATTTTAAAGTAGAGTAAGAAAACATGACTAGTACATAAAGAAGAAAGTTATTACAAAAGAGAACTTGGATTTGATTTAGTTTTCTTCTTGTGGATACTTACTTTTGGTTCTGTTCACAGGCGAGGAATACGAGAGATCCTGGGAACAGAATGAGGAACTTGGTTTGAACGACATGGACACTTCGGCCGCTGATGCTGCATATAATTAACTAATCAAAAGAATGCTGCTACATTAGAGAACATAGAAAGCTTCAACACAATCAGAGATTTCAGGTATCCGAAGAGGTTGATTCCCGGGTTATAGGTTGACTTTATAAACTTATAGGTATCAAATTTTCTTCCATTGTTGTATCTTATATTTATTCCTAATGCAAGTGTATCCACAATTTAGGCCATGTTCAATGTGTTTACACCAGCGCTGAACAAACTCAAACAAATGAGGGGTCTCTTTTGGCTTGATTTTGGACCTTTGTTCCTAAATTAATCTTAATTCCACCTGGATCTT ATGGTCGGGTGTCTCTTGAGTTTGGAACAGCCTTGGACTCTCATCCTTGATGATGCACTAGCTAATTCGTTTATTGCACCAGTGACTGATGATATGAAAGATGACCATCAGTTAACATGCGAGGAATACGAGAGATCCTGGGAACAGAATGAGGAACTTGGTTTGAACGACATGGACACTTCGGCCGCTGATGCTGCATATAATTAACTAATCAAAAGAATGCTGCTACATTAGAGAACATAGAAAGCTTCAACACAATCAGAGATTTCAGGTATCCGAAGAGGTTGATTCCCGGGTTATAGGTTGACTTTATAAACTTATAGGTATCAAATTTTCTTCCATTGTTGTATCTTATATTTATTCCTAATGCAAGTGTATCCACAATTTAGGCCATGTTCAATGTGTTTACACCAGCGCTGAACAAACTCAAACAAATGAGGGGTCTCTTTTGGCTTGATTTTGGACCTTTGTTCCTAAATTAATCTTAATTCCACCTGGATCTT ATGGTCGGGTGTCTCTTGAGTTTGGAACAGCCTTGGACTCTCATCCTTGATGATGCACTAGCTAATTCGTTTATTGCACCAGTGACTGATGATATGAAAGATGACCATCAGTTAACATGCGAGGAATACGAGAGATCCTGGGAACAGAATGAGGAACTTGGTTTGAACGACATGGACACTTCGGCCGCTGATGCTGCATATAATTAA MVGCLLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDTSAADAAYN
BLAST of ClCG01G009330 vs. Swiss-Prot
Match: ZPR1_CAEEL (Zinc finger protein ZPR1 homolog OS=Caenorhabditis elegans GN=W03F9.1 PE=3 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 3.9e-06 Identity = 26/54 (48.15%), Postives = 36/54 (66.67%), Query Frame = 1
BLAST of ClCG01G009330 vs. Swiss-Prot
Match: ZPR1_DICDI (Zinc finger protein ZPR1 homolog OS=Dictyostelium discoideum GN=zpr1 PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 5.1e-06 Identity = 26/52 (50.00%), Postives = 36/52 (69.23%), Query Frame = 1
HSP 2 Score: 36.2 bits (82), Expect = 1.7e-01 Identity = 21/51 (41.18%), Postives = 27/51 (52.94%), Query Frame = 1
BLAST of ClCG01G009330 vs. TrEMBL
Match: A0A0A0LYE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G707650 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 2.8e-27 Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 1
BLAST of ClCG01G009330 vs. TrEMBL
Match: D7T9K7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g01690 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 5.3e-26 Identity = 57/64 (89.06%), Postives = 62/64 (96.88%), Query Frame = 1
BLAST of ClCG01G009330 vs. TrEMBL
Match: V4LER7_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10013358mg PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 1.5e-25 Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 1
BLAST of ClCG01G009330 vs. TrEMBL
Match: A0A068VDV0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00011293001 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 3.4e-25 Identity = 56/64 (87.50%), Postives = 61/64 (95.31%), Query Frame = 1
BLAST of ClCG01G009330 vs. TrEMBL
Match: A0A103YFG1_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_013508 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 3.4e-25 Identity = 56/64 (87.50%), Postives = 61/64 (95.31%), Query Frame = 1
BLAST of ClCG01G009330 vs. TAIR10
Match: AT5G22480.1 (AT5G22480.1 ZPR1 zinc-finger domain protein) HSP 1 Score: 119.8 bits (299), Expect = 6.6e-28 Identity = 56/63 (88.89%), Postives = 58/63 (92.06%), Query Frame = 1
BLAST of ClCG01G009330 vs. TAIR10
Match: AT5G37340.2 (AT5G37340.2 ZPR1 zinc-finger domain protein) HSP 1 Score: 118.2 bits (295), Expect = 1.9e-27 Identity = 56/63 (88.89%), Postives = 58/63 (92.06%), Query Frame = 1
BLAST of ClCG01G009330 vs. NCBI nr
Match: gi|778664613|ref|XP_004145481.2| (PREDICTED: zinc finger protein ZPR1-like [Cucumis sativus]) HSP 1 Score: 128.6 bits (322), Expect = 4.0e-27 Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 1
BLAST of ClCG01G009330 vs. NCBI nr
Match: gi|659118316|ref|XP_008459058.1| (PREDICTED: zinc finger protein ZPR1-like isoform X1 [Cucumis melo]) HSP 1 Score: 128.6 bits (322), Expect = 4.0e-27 Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 1
BLAST of ClCG01G009330 vs. NCBI nr
Match: gi|225423682|ref|XP_002277005.1| (PREDICTED: zinc finger protein ZPR1 isoform X1 [Vitis vinifera]) HSP 1 Score: 124.4 bits (311), Expect = 7.6e-26 Identity = 57/64 (89.06%), Postives = 62/64 (96.88%), Query Frame = 1
BLAST of ClCG01G009330 vs. NCBI nr
Match: gi|731371327|ref|XP_010648803.1| (PREDICTED: zinc finger protein ZPR1 isoform X2 [Vitis vinifera]) HSP 1 Score: 122.9 bits (307), Expect = 2.2e-25 Identity = 56/64 (87.50%), Postives = 61/64 (95.31%), Query Frame = 1
BLAST of ClCG01G009330 vs. NCBI nr
Match: gi|567176529|ref|XP_006400754.1| (hypothetical protein EUTSA_v10013358mg [Eutrema salsugineum]) HSP 1 Score: 122.9 bits (307), Expect = 2.2e-25 Identity = 58/63 (92.06%), Postives = 61/63 (96.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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