ClCG01G009260 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G009260
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Lectin family protein
Location	CG_Chr01 : 12360817 .. 12362057 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGCTTTCTCATATTCATCACCTCATTCCAATGGAGATCCAAAGGCAATAGAAAAGATTAAGGTATAAATTTGAAACCTCTTGACCATCTAAAGCTTCATTAATAATTTCCTTCTACATACCATTCTTAATATCTAACATTATTAATTAATTCAATATTCATAGAACCAAAAGACAATAATTTATCCCAATGGTTTCAACATCACATGGGGCAACGACAACCGTTATTGGCGCTTACCTCGTCAATCTCGTAACTTGTAAGCCACCTTACTCATTTCTTTTTCACTACACATATCAATATCTTTTATTGAAATGGTAAAAACTCATTCAATTATTTCCTCCTATATGTCAATATTATCATTCACATTATTGAAATTTAAAGTATCGACATAAAAGGACTATATAATAAAGGTAAAAGAGAAAAGCTAAACTAACATTGATGATGATTCTTTTTTAAACTTATCTTTAACTAAAAAAAAAAAAAAAAGAAAGAAATGTATGTTTAATAATTTAAATATCTCTTGTGATTTAGAGAAAACCGTCTTTATTTTTGTCTTTTCTTATATATTTTTCTAAGAGACTAATAGAGAGTTCTAGGAGTTAAGGTTGGAGGAAGTAGACATGTGAACTAGATTTTTTGTTTGGCTTTAGGAGTTTGGTAGTTCACTACTAAAAAAAATATCAATTTTATGTCTTATTAAGTCTTTACATTGTGATTCTAGGAGTTCACAGCTTTTCAAAAACTTCACAACTCTATTTGTTACTCCAAACGCTCTTTCAACTCTTAACAATATCTTAATCAATATACATATTTACAACTTTATTTCAATTGATTACTTCGTAGGAAGGAGTCGAGTGCAGCAGCAGAGTTACTACAAGTGTCATGGTTCGAGGTGACATGTTCAACAGACAATGTGGATGTCGGAAAAAGCTACAGAGTTGGGTTCAACCTATCCATGACAGTCGCAGCTTTTGGCTGGAAAGGATGTGAAGTTTACATAATGGCCAAGATTGGGAAGGCAGGGAAATTTGTGTACAAGAAGGTGTGTCTTGACACTCGATGCTCTGATCAGAACAAGTTCAATATGCCGGAAGATGATCTAATTATCACCGTGAACCCTCCGCCGAGCTCACCGGGAGACAACCGTCTCTACTTTGGAATGTACGAGGTTTGGAGTGGGAGATGGAAGGGAGGACTCAAAATCCACCATGCATTTGTCGAGAAGGTTGGAAACTAG

mRNA sequence

ATGGTTGCTTTCTCATATTCATCACCTCATTCCAATGGAGATCCAAAGGCAATAGAAAAGATTAAGAACCAAAAGACAATAATTTATCCCAATGGTTTCAACATCACATGGGGCAACGACAACCGTTATTGGCGCTTACCTCGTCAATCTCGTAACTTGAAGGAGTCGAGTGCAGCAGCAGAGTTACTACAAGTGTCATGGTTCGAGGTGACATGTTCAACAGACAATGTGGATGTCGGAAAAAGCTACAGAGTTGGGTTCAACCTATCCATGACAGTCGCAGCTTTTGGCTGGAAAGGATGTGAAGTTTACATAATGGCCAAGATTGGGAAGGCAGGGAAATTTGTGTACAAGAAGGTGTGTCTTGACACTCGATGCTCTGATCAGAACAAGTTCAATATGCCGGAAGATGATCTAATTATCACCGTGAACCCTCCGCCGAGCTCACCGGGAGACAACCGTCTCTACTTTGGAATGTACGAGGTTTGGAGTGGGAGATGGAAGGGAGGACTCAAAATCCACCATGCATTTGTCGAGAAGGTTGGAAACTAG

Coding sequence (CDS)

ATGGTTGCTTTCTCATATTCATCACCTCATTCCAATGGAGATCCAAAGGCAATAGAAAAGATTAAGAACCAAAAGACAATAATTTATCCCAATGGTTTCAACATCACATGGGGCAACGACAACCGTTATTGGCGCTTACCTCGTCAATCTCGTAACTTGAAGGAGTCGAGTGCAGCAGCAGAGTTACTACAAGTGTCATGGTTCGAGGTGACATGTTCAACAGACAATGTGGATGTCGGAAAAAGCTACAGAGTTGGGTTCAACCTATCCATGACAGTCGCAGCTTTTGGCTGGAAAGGATGTGAAGTTTACATAATGGCCAAGATTGGGAAGGCAGGGAAATTTGTGTACAAGAAGGTGTGTCTTGACACTCGATGCTCTGATCAGAACAAGTTCAATATGCCGGAAGATGATCTAATTATCACCGTGAACCCTCCGCCGAGCTCACCGGGAGACAACCGTCTCTACTTTGGAATGTACGAGGTTTGGAGTGGGAGATGGAAGGGAGGACTCAAAATCCACCATGCATTTGTCGAGAAGGTTGGAAACTAG

Protein sequence

MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDTRCSDQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN

Homology

[Close]

BLAST of ClCG01G009260 vs. Swiss-Prot
Match: P2A09_ARATH (Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana GN=PP2A9 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 9.5e-31
Identity = 75/188 (39.89%), Postives = 101/188 (53.72%), Query Frame = 1


Query: 5   SYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQ 64
           S  S H   D K  +    +  I  P+G N  WG D+RYW +P++ R        AEL  
Sbjct: 3   SQKSSHHKADSKMEQDNNRKAWISQPSGLNFVWGGDSRYWVIPKEPR------MPAELKM 62

Query: 65  VSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDT 124
           VSW EVT S D ++ GK+YR+GF +S    A GW    V++ AKIGK GK V+K++    
Sbjct: 63  VSWLEVTGSFDKIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRI---- 122

Query: 125 RCSDQN---------KFNMPE--DDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKI 182
           +   QN           N+P+  D L   +  P +   D +L FG+YEVW+GRWK GL I
Sbjct: 123 KSVSQNFGILKGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGLLI 180

[Close]

BLAST of ClCG01G009260 vs. TrEMBL
Match: A0A0A0LYD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703580 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 2.0e-88
Identity = 156/184 (84.78%), Postives = 166/184 (90.22%), Query Frame = 1


Query: 1   MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAA 60
           MV F YSSPH NG+PKAIEK KNQK IIYP GF ITWGND RYWR PRQSRNLKESSAAA
Sbjct: 1   MVGFFYSSPHFNGNPKAIEKAKNQKVIIYPKGFTITWGNDKRYWRFPRQSRNLKESSAAA 60

Query: 61  ELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKV 120
           ELLQVSW EVTC TDNV++GKSY+VGFN+SMT AAFGWKGCEVYIMAKIGKAGKFVYKK+
Sbjct: 61  ELLQVSWLEVTCWTDNVEIGKSYKVGFNVSMTAAAFGWKGCEVYIMAKIGKAGKFVYKKM 120

Query: 121 CLDTRCSD-QNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVE 180
           CLD + SD Q KFNMPED+LIITV PP +SPGDNRLYFGMYEVWSG+WKGGLKIHHAFVE
Sbjct: 121 CLDGKASDGQTKFNMPEDNLIITVKPPSTSPGDNRLYFGMYEVWSGKWKGGLKIHHAFVE 180

Query: 181 KVGN 184
           KVGN
Sbjct: 181 KVGN 184

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BLAST of ClCG01G009260 vs. TrEMBL
Match: A0A0A0M0V4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703570 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.3e-52
Identity = 103/177 (58.19%), Postives = 127/177 (71.75%), Query Frame = 1


Query: 7   SSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWR-LPRQSRNLKESSAAAELLQV 66
           S PHS+ DP+AIE  K  K I YP    ITWGNDNRYWR LP  S NLK+  +A +LLQV
Sbjct: 5   SKPHSDADPRAIEITKGGKMIFYPRALTITWGNDNRYWRFLP--STNLKDPKSAVQLLQV 64

Query: 67  SWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDTR 126
           SW EVTCSTD V+ G++Y+VGFN+S+   AFGW   EV+IMAK+GK G + +KK     R
Sbjct: 65  SWLEVTCSTDKVEAGQTYKVGFNVSLQPDAFGWDDVEVFIMAKVGKKGTYFFKKTSFGKR 124

Query: 127 C-SDQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV 182
             +   KF++P++ L I +  P SSPGD  LYFG+YEVWSG+WKGGL+IH AFVEKV
Sbjct: 125 LGTSSKKFSVPDEGLEIKIVAPQSSPGDCSLYFGLYEVWSGKWKGGLQIHDAFVEKV 179

[Close]

BLAST of ClCG01G009260 vs. TrEMBL
Match: A0A0A0LYR0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G708660 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.4e-41
Identity = 83/156 (53.21%), Postives = 106/156 (67.95%), Query Frame = 1


Query: 26  TIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRV 85
           T +YP GFNITWGND+RYW + +   N+  S   AEL QVSW EVTCSTDNV+VGK YRV
Sbjct: 25  TKVYPTGFNITWGNDDRYWNITKP--NVPGSLYVAELKQVSWLEVTCSTDNVEVGKYYRV 84

Query: 86  GFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDTRCSDQNKFNMPEDDLIITVNP 145
           GFN++M   AFGW G +VY+MAK+GK GKF   KV L+    D     +P+  L I VNP
Sbjct: 85  GFNITMKPDAFGWNGIDVYVMAKVGKKGKFTSMKVSLEEIKPDNIPITIPKKPLEIFVNP 144

Query: 146 PPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV 182
                  + ++ G+YEVWS +WKGG++IH AF+ +V
Sbjct: 145 VTPEECRSTIHLGLYEVWSSKWKGGMQIHDAFIHRV 178

[Close]

BLAST of ClCG01G009260 vs. TrEMBL
Match: W9S3K5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018467 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.7e-37
Identity = 75/159 (47.17%), Postives = 106/159 (66.67%), Query Frame = 1


Query: 23  NQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKS 82
           N   + YP   NI WG D RYWRLP +  + +E +  AEL+QVSW EVT +TD ++  KS
Sbjct: 18  NGTIVFYPRALNIVWGADTRYWRLPEKQTD-REKTRPAELIQVSWLEVTGTTDPLNEEKS 77

Query: 83  YRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDTRCSDQNKFNMPEDDLIIT 142
           Y++ F LS+   AFGW GC++Y+MAK+G+ G++ + KV    +  +   F +P +D +I 
Sbjct: 78  YKISFELSLKPDAFGWNGCQLYLMAKLGRRGRYKWTKVTFKDQ-PNNRPFTVPAEDFVIK 137

Query: 143 VNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV 182
           V PP +   D +LYFG+YEVWSG+WKGGL+IH A V +V
Sbjct: 138 V-PPSTDAEDRKLYFGLYEVWSGKWKGGLEIHKAEVAEV 173

[Close]

BLAST of ClCG01G009260 vs. TrEMBL
Match: A0A067JJY8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00140 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.8e-36
Identity = 86/174 (49.43%), Postives = 108/174 (62.07%), Query Frame = 1


Query: 7   SSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVS 66
           S PH   +  A+EK K  K I+ P   NI WGND RYW+L R         A+AELLQV 
Sbjct: 3   SKPHREANLNAVEK-KENKWILGPPALNIVWGNDERYWKLSRDQ-------ASAELLQVC 62

Query: 67  WFEVTCST-DNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDTR 126
           W EVT ST +N+  GKSY + F + M   AFGW GC V+IMAKIGK GK+ ++K+ L   
Sbjct: 63  WLEVTGSTSENLQKGKSYEIKFKVEMKEGAFGWNGCPVFIMAKIGKKGKYKWEKIDLINL 122

Query: 127 CSD-QNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFV 179
             D + +F +P + L + V P   S  D +LYFG+YEVW+GRWKGGL IH A V
Sbjct: 123 AKDKKGQFEIPVNGLTVEV-PATYSGEDTKLYFGLYEVWTGRWKGGLVIHQAEV 167

[Close]

BLAST of ClCG01G009260 vs. TAIR10
Match: AT1G31200.1 (AT1G31200.1 phloem protein 2-A9)

HSP 1 Score: 134.8 bits (338), Expect = 5.3e-32
Identity = 75/188 (39.89%), Postives = 101/188 (53.72%), Query Frame = 1


Query: 5   SYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQ 64
           S  S H   D K  +    +  I  P+G N  WG D+RYW +P++ R        AEL  
Sbjct: 3   SQKSSHHKADSKMEQDNNRKAWISQPSGLNFVWGGDSRYWVIPKEPR------MPAELKM 62

Query: 65  VSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDT 124
           VSW EVT S D ++ GK+YR+GF +S    A GW    V++ AKIGK GK V+K++    
Sbjct: 63  VSWLEVTGSFDKIEPGKTYRIGFKISFKPDATGWDKAPVFMSAKIGKKGKTVWKRI---- 122

Query: 125 RCSDQN---------KFNMPE--DDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKI 182
           +   QN           N+P+  D L   +  P +   D +L FG+YEVW+GRWK GL I
Sbjct: 123 KSVSQNFGILKGGSEPVNIPDESDGLFEILVSPTALNQDTKLQFGLYEVWTGRWKTGLLI 180

[Close]

BLAST of ClCG01G009260 vs. TAIR10
Match: AT1G10155.1 (AT1G10155.1 phloem protein 2-A10)

HSP 1 Score: 133.3 bits (334), Expect = 1.6e-31
Identity = 70/182 (38.46%), Postives = 102/182 (56.04%), Query Frame = 1


Query: 8   SPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSW 67
           S H   +    + I  +  +  P+G N  WG D+RYW +P + R        AEL +VSW
Sbjct: 9   SSHYEAESNMEQDIVRKAWVFKPSGLNFIWGGDSRYWVIPNEDRT------PAELKKVSW 68

Query: 68  FEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDTRCS 127
            EVT S D ++ GK+YR+GF +S T  A GW    V++ AKIGK G+ ++K++       
Sbjct: 69  LEVTGSYDKIEPGKTYRIGFKISFTADATGWDQAPVFMSAKIGKKGRTIWKRIKSVNNNF 128

Query: 128 DQNK-----FNMPEDD---LIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVE 182
           D+ K      N+P++      I V+P  +   D +L FG+YEVW+G+WK GL I+ AFVE
Sbjct: 129 DKLKGGTGPVNIPDETDGRFEIFVSPKVAINQDTKLQFGLYEVWTGKWKTGLLIYEAFVE 184

[Close]

BLAST of ClCG01G009260 vs. NCBI nr
Match: gi|659118304|ref|XP_008459052.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo])

HSP 1 Score: 344.7 bits (883), Expect = 9.6e-92
Identity = 161/184 (87.50%), Postives = 171/184 (92.93%), Query Frame = 1


Query: 1   MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAA 60
           MV F YSSPH NGDPKAIEK KN+KTIIYP GFNITWGND RYWRLPRQSRNLKESSAAA
Sbjct: 1   MVGFFYSSPHFNGDPKAIEKAKNKKTIIYPKGFNITWGNDKRYWRLPRQSRNLKESSAAA 60

Query: 61  ELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKV 120
           ELLQVSW EVTC TDNV++GKSY+VGFN+SMT AAFGWKGC+VYIMAKIGKAGKFVYKK+
Sbjct: 61  ELLQVSWLEVTCWTDNVEIGKSYKVGFNVSMTAAAFGWKGCDVYIMAKIGKAGKFVYKKM 120

Query: 121 CLDTRCS-DQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVE 180
           CLD++ S DQNKFNMPEDDLIITV PP SSPGDNRLYFGMYEVWSG+WKGGLKIHHAFVE
Sbjct: 121 CLDSKASDDQNKFNMPEDDLIITVKPPSSSPGDNRLYFGMYEVWSGKWKGGLKIHHAFVE 180

Query: 181 KVGN 184
           KVGN
Sbjct: 181 KVGN 184

[Close]

BLAST of ClCG01G009260 vs. NCBI nr
Match: gi|778664568|ref|XP_011660313.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis sativus])

HSP 1 Score: 333.2 bits (853), Expect = 2.9e-88
Identity = 156/184 (84.78%), Postives = 166/184 (90.22%), Query Frame = 1


Query: 1   MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAA 60
           MV F YSSPH NG+PKAIEK KNQK IIYP GF ITWGND RYWR PRQSRNLKESSAAA
Sbjct: 1   MVGFFYSSPHFNGNPKAIEKAKNQKVIIYPKGFTITWGNDKRYWRFPRQSRNLKESSAAA 60

Query: 61  ELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKV 120
           ELLQVSW EVTC TDNV++GKSY+VGFN+SMT AAFGWKGCEVYIMAKIGKAGKFVYKK+
Sbjct: 61  ELLQVSWLEVTCWTDNVEIGKSYKVGFNVSMTAAAFGWKGCEVYIMAKIGKAGKFVYKKM 120

Query: 121 CLDTRCSD-QNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVE 180
           CLD + SD Q KFNMPED+LIITV PP +SPGDNRLYFGMYEVWSG+WKGGLKIHHAFVE
Sbjct: 121 CLDGKASDGQTKFNMPEDNLIITVKPPSTSPGDNRLYFGMYEVWSGKWKGGLKIHHAFVE 180

Query: 181 KVGN 184
           KVGN
Sbjct: 181 KVGN 184

[Close]

BLAST of ClCG01G009260 vs. NCBI nr
Match: gi|778664566|ref|XP_011660312.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 3.3e-52
Identity = 103/177 (58.19%), Postives = 127/177 (71.75%), Query Frame = 1


Query: 7   SSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWR-LPRQSRNLKESSAAAELLQV 66
           S PHS+ DP+AIE  K  K I YP    ITWGNDNRYWR LP  S NLK+  +A +LLQV
Sbjct: 5   SKPHSDADPRAIEITKGGKMIFYPRALTITWGNDNRYWRFLP--STNLKDPKSAVQLLQV 64

Query: 67  SWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDTR 126
           SW EVTCSTD V+ G++Y+VGFN+S+   AFGW   EV+IMAK+GK G + +KK     R
Sbjct: 65  SWLEVTCSTDKVEAGQTYKVGFNVSLQPDAFGWDDVEVFIMAKVGKKGTYFFKKTSFGKR 124

Query: 127 C-SDQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV 182
             +   KF++P++ L I +  P SSPGD  LYFG+YEVWSG+WKGGL+IH AFVEKV
Sbjct: 125 LGTSSKKFSVPDEGLEIKIVAPQSSPGDCSLYFGLYEVWSGKWKGGLQIHDAFVEKV 179

[Close]

BLAST of ClCG01G009260 vs. NCBI nr
Match: gi|449455437|ref|XP_004145459.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus])

HSP 1 Score: 176.8 bits (447), Expect = 3.5e-41
Identity = 83/156 (53.21%), Postives = 106/156 (67.95%), Query Frame = 1


Query: 26  TIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRV 85
           T +YP GFNITWGND+RYW + +   N+  S   AEL QVSW EVTCSTDNV+VGK YRV
Sbjct: 25  TKVYPTGFNITWGNDDRYWNITKP--NVPGSLYVAELKQVSWLEVTCSTDNVEVGKYYRV 84

Query: 86  GFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDTRCSDQNKFNMPEDDLIITVNP 145
           GFN++M   AFGW G +VY+MAK+GK GKF   KV L+    D     +P+  L I VNP
Sbjct: 85  GFNITMKPDAFGWNGIDVYVMAKVGKKGKFTSMKVSLEEIKPDNIPITIPKKPLEIFVNP 144

Query: 146 PPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV 182
                  + ++ G+YEVWS +WKGG++IH AF+ +V
Sbjct: 145 VTPEECRSTIHLGLYEVWSSKWKGGMQIHDAFIHRV 178

[Close]

BLAST of ClCG01G009260 vs. NCBI nr
Match: gi|659118310|ref|XP_008459054.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo])

HSP 1 Score: 174.1 bits (440), Expect = 2.3e-40
Identity = 90/175 (51.43%), Postives = 116/175 (66.29%), Query Frame = 1


Query: 9   PHSNGDPKAIEK-IKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSW 68
           PH   D  A EK +    T +YP GFNITWGND+RYW +     N+  S   AEL QVSW
Sbjct: 6   PHREADETAKEKNVIKGITKVYPRGFNITWGNDDRYWNITNP--NVPGSLYMAELKQVSW 65

Query: 69  FEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDTRCS 128
            EVTCSTDNV+VG++YRVGFN++M   AFGW G +VY+MAK+GK GKF   KV L     
Sbjct: 66  LEVTCSTDNVEVGETYRVGFNITMRPDAFGWDGIDVYVMAKVGKKGKFTSMKVSLGEIGP 125

Query: 129 DQNKFNMPEDDLIITVNPPPSSPGDNR-LYFGMYEVWSGRWKGGLKIHHAFVEKV 182
           ++    +P++ L I V    S+P + R ++ G+YEVWS +WKGGL+IH AF+ KV
Sbjct: 126 NETPITIPKEPLEIFV--AHSTPKECRTIHLGLYEVWSSKWKGGLQIHDAFIYKV 176

The following BLAST results are available for this feature:

BLAST of ClCG01G009260 vs. Swiss-Prot


Match Name	E-value	Identity	Description
P2A09_ARATH	9.5e-31	39.89	Protein PHLOEM PROTEIN 2-LIKE A9 OS=Arabidopsis thaliana GN=PP2A9 PE=2 SV=1	[more]

BLAST of ClCG01G009260 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYD1_CUCSA	2.0e-88	84.78	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703580 PE=4 SV=1	[more]
A0A0A0M0V4_CUCSA	2.3e-52	58.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703570 PE=4 SV=1	[more]
A0A0A0LYR0_CUCSA	2.4e-41	53.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G708660 PE=4 SV=1	[more]
W9S3K5_9ROSA	4.7e-37	47.17	Uncharacterized protein OS=Morus notabilis GN=L484_018467 PE=4 SV=1	[more]
A0A067JJY8_JATCU	1.8e-36	49.43	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00140 PE=4 SV=1	[more]

BLAST of ClCG01G009260 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31200.1	5.3e-32	39.89	phloem protein 2-A9	[more]
AT1G10155.1	1.6e-31	38.46	phloem protein 2-A10	[more]

BLAST of ClCG01G009260 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118304\|ref\|XP_008459052.1\|	9.6e-92	87.50	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]	[more]
gi\|778664568\|ref\|XP_011660313.1\|	2.9e-88	84.78	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis sativus]	[more]
gi\|778664566\|ref\|XP_011660312.1\|	3.3e-52	58.19	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis sativus]	[more]
gi\|449455437\|ref\|XP_004145459.1\|	3.5e-41	53.21	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus]	[more]
gi\|659118310\|ref\|XP_008459054.1\|	2.3e-40	51.43	PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025886	PP2-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G009260.1	ClCG01G009260.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 26..175 score: 5.2
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 19..183 score: 1.4
None	No IPR available	PANTHER	PTHR32278:SF8	PHLOEM PROTEIN 2-A10-RELATED	coord: 19..183 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G009260	Cucumber (Chinese Long) v3	cucwcgB025
ClCG01G009260	Watermelon (97103) v2	wcgwmbB089
ClCG01G009260	Watermelon (97103) v2	wcgwmbB090
ClCG01G009260	Wax gourd	wcgwgoB236
ClCG01G009260	Wax gourd	wcgwgoB240
ClCG01G009260	Cucumber (Gy14) v1	cgywcgB415
ClCG01G009260	Cucurbita maxima (Rimu)	cmawcgB184
ClCG01G009260	Cucurbita maxima (Rimu)	cmawcgB186
ClCG01G009260	Cucurbita maxima (Rimu)	cmawcgB342
ClCG01G009260	Cucurbita moschata (Rifu)	cmowcgB174
ClCG01G009260	Cucurbita moschata (Rifu)	cmowcgB177
ClCG01G009260	Cucurbita moschata (Rifu)	cmowcgB340
ClCG01G009260	Wild cucumber (PI 183967)	cpiwcgB026
ClCG01G009260	Cucumber (Chinese Long) v2	cuwcgB023
ClCG01G009260	Melon (DHL92) v3.5.1	mewcgB134
ClCG01G009260	Melon (DHL92) v3.5.1	mewcgB140
ClCG01G009260	Watermelon (97103) v1	wcgwmB151
ClCG01G009260	Cucurbita pepo (Zucchini)	cpewcgB028
ClCG01G009260	Cucurbita pepo (Zucchini)	cpewcgB458
ClCG01G009260	Cucurbita pepo (Zucchini)	cpewcgB451
ClCG01G009260	Bottle gourd (USVL1VR-Ls)	lsiwcgB169
ClCG01G009260	Bottle gourd (USVL1VR-Ls)	lsiwcgB177
ClCG01G009260	Cucumber (Gy14) v2	cgybwcgB022
ClCG01G009260	Melon (DHL92) v3.6.1	medwcgB130
ClCG01G009260	Melon (DHL92) v3.6.1	medwcgB132
ClCG01G009260	Silver-seed gourd	carwcgB0439
ClCG01G009260	Silver-seed gourd	carwcgB0933