ClCG01G009230 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGATCTGGGTGGTCGGAAGAGCAGGCTGCACAGCCGCCGCAGCAGCCAGCTACGGTTGGCGCAGCCATAAGAAACAACGAGCATAGCAGCGGCAACTCGAGTAATAATAATTTAAAGGAAGAAAAAGAGAAGGTGGTGAAAGGGAAATTAGGAGAAGAAGTGAAGCTTGGCCATGGGTTTGAAGCTATTTTGAAAGATGCAGATTTGCCAGTGGATAGGTCTTCCTTGGATAAGCTCTATGATCAACTCTATGCGGGGATCTTCTTGAACAAACGAACTAAGGCAAGTGTAACACTAGAAATGATATTTACTTTTACAAGTATTATAATGAAATTTGAATGTTTTTGCTATTTGAAAAGAAAAATACTTTGGATATATTTAAGGCTGCGTTCATCCTTGACCAACTAATTCATATGTGAAAGACTTTTTTTCTTAAAAAAAGATAATTTTCTTATATTTCATCTTACAAATCATTTAGATGCACAAAACATAGGTTGATTAGTTTTGTTCATGTACGACTTTTTGCATCTATAGTGTCAAAAGGATTCATTTTTTTCTCAATTATTAGTCAACTATCATTCTTCTTGTAATATTGACAAAAAAAAATTCTCACTTAGTAGTTTTATATTTTTTTGTAATTGTGTTAATTTATTATATTAGTACTTACGACTGAGTAGAAAATAAAAGAAAACATCCCTCAAAAGAAAAATAAAAGAAAATAAATATGTTGGTATTTCACGTGGATAAAACATGATTTAGAGGTGACTTGTAAGGTTTTAACTCAAACATAGAAACTCGAAAAATTTGAGAATTAGAAAATAGCAAAATTGAATCTAAGCTCAACCCACACAAAGATTGATTAAAATGAATCTAACTAAATTATCTGGACAAAATTGAAACCTTTTCAAAACTATAGTCATACGAAGAGCAAAAAGAAGAGGGAGGAGAGCGACGAGAAAGGATATATAATTTTTTAAGATGTCATAACATTATTTTTAAAGTTAAATTATTTTAAATGACAAAACTACTGAAAATAGTTACAACTAATAGCAAAATATACTATCTACGATAGACACAGATAATAGTCAATCATAATCTATCACAGTCTATTGCAAATATACATTGAAATTTTACTATATTTGTAAATATTTTAGTTCCTTTTGCTATATTTGAAAAGAACCCTAAATACAAAAAATCTTATCAACTTATTTGGACTAAACTGATAACATTAATAACTCTCAGACTAAATGTACTTATTCCTCCAAATTTGGGAACTATAATAGGAATTTTCCTAATTTATTTTACTATATTTACATAGTATAATTTGTTTGCCTCACAAATATTTTATCATCTTGATCTGCTTCACGTAAGGCAAAGATATATTTTTTATTCAATGTAAAAGTTCACTTTGATTTACTTTGAATGCAGAAATATTGGTTAGATAAGAAGTTGAACAGTAACTGTTTCATGTTATTTCCAAGAGCTCTCTCAATAACTTGGGCTGAAGAGAACAAGTACTGGAGATGGAAATCCATGGAAGAGTCTAGGTATACTCCAAAACTAAATTTATTTTTGTTCCTTAAAAATTCATTTCCATCTTTTGTTTGGAGAAAATTAATCTTAACTGGACAAAAAAAAAAAAAAAATTGGGTTTGAACTCCTATCTTCCAGCTATGATACTAAGTTAGCTGGAAAAAAAAATAATAAATATATAAAAATAATAGTATTTCGAAAAAATAATAATCATTGAAGTCATAAAGGGTAGAAATATCTTCAATTTATCAAAGAAAAATAATTGGGTGCATCCACTTATCTTTGTGCAATCCATTTGAGTGTGTCCATCACGGGTTATCACGTTGACACACACTTTTTTTTTTTTTTTTTTTTTAAGGATGATTGAAGTACAAACTTCATTCAAATAATACCCTTCATCAATATAATGATGTAGAAATTGAAGTTATAATGGAGTACCAAGATCAAAGATGATAAAATTTCATCTTACACCCTTATTTTTTTAGATGGTAGAAATTAAAACAAGGGACATTACGAGGTATGAAAAGGTTGGTTGCATAACTAACAATCAATTCCAAAATAATAGCATATACAGCATAAAGATAAAATAATTGCATATGTAGCACAAAAAATGACCTGAATATTGTAAAAGACTAAGAAGTCCATAATGTTCGTGCTTCTTCTTTCCAGTTTTCTCAAATTGAAACTATCAATGAACTATTAGTAATAGCCACTAATAGTTGTTATCATAAATAACTTTCAATTTGAGCAATATTAATACAACTTTGAAATATTGACACTTTATATGTTAGCTTTTAATTTGTTATCAATTATCAGTGGCTATAATTGATACACTTTCAGCAATTGAAATCAACCTTGAAATATTAACATTTAAGGCTATTAGTGGCTATTAATGATCGACTTTTATAAGTAGTTATCCATTTTGAAAGATAACCATCGACTTTGAAAGATTAAACTATACCAGTGAAGAACTTTGAAAGATTAAACTATACCAGTGATAGAAAAGTATTATTGGCTATCATTGATAGACTTTCATAGATGACTATTGAAAGTTGCAGAATTCGTTGCCCGATTCTGCTTCCCAAATAATTAATCACACTCACCAAAACTAGTAAGTATTGGCAAGACTAGGTCGAACACAAGGAGCACTAGAATTTCTAAATTAAACTACTTATAGTCCAAGAGTAACCCATAGGGGTTTTGTGATTGTTTAGTTTGCGAATTAAATTTAAATGGCATAAAAAAATGCAATGAATAAAAGAGTAAAAATTGATATGAAAAAAGTCTAGCCTGAGTTGTAACGGATTTTTCTATTCAAGAACTTTGGTTATCGATTCTTCATTATCAAAATTTAATGATTGCTTACACCAAACCAAATTAATTAGAAAGGCTAATTAATTTTTCATAAGCAACTAACTAGCCCAACTTGAAAAGATAAAAGCATGCATATTCAAATTGGCCTAATTGCATTAAGATATAGGGAACGTTAGGGTGAATGTTTAATTTTCAAGAGCATAATAAAACATTCGTTTGGTTCAATTCTAGGCTGGTTAGATCAATACTCATCTAAGTTGATTCACAAGCTAACCTAACCTATTGCATTCTACGATTAACATGCAATAGAGCGTAAGGAATTGAATATTAATCAGAAAGCAATGATCATAATATTTCCAAGCATCCAATAAAATGGTCGTACCACGATGAAACTAGGAATCGAACCAACAAATACAATAAACTTCCGTTTGAAATCTACCAATTACAAGAAATAGGAAAAAATCCTAGAAACTCAAGCTAGAGAATGTTACCTTATCCCATTATCGACATATCAATTAATGGGATTGAGTTTTGGTACATAAATAGATGAAAAAGAGAGGAAAAGTGGAGAGAATTTGAGGTTGAGTCGGTTGGATCCTTCAAAAACTAACCCAAACATTGCAAAATCTCATTTTATAACTAGTCGGAGCACCACAACGCTTAGTGTAGCACCATGACGTTGTCACGATGATGCTTGCAACTTTTCTTAGGAGCATCACGACGTTCTTGGACCGTGTTGCAATGCTTGCTACATTTGCCAGCATTTCCTCTTGGGAAAAAGCACTGCGACGGCGCCTAGATGACACCGTTATTCCATGAACTCAGGGGAAAAGTAGTCATTTTAGCCTTCTCTTTCTCGATTGATGCATAAGCTTCGTTTTGACCTGTTTTAGTTCCATTTCATTACTAATGCCCTGTTCTACCTATTAGGTGCTCGAACCTACAAAATAATCAAATAAAGGAATAAAACCAAGGAACAATCTTGAATTAAGCGGGGCAAGATAACACATTTTTAGTGCTATCAACTATCAACTTTAAATGATTAACACAGTAGCTGTCACACCCTCCCCTAAGTTAGCCTTTAACCTAGAGAAAGATGTGAGGACAGTAAGTATCGGCCCTTTCACGACAGTCACTGACCAACCTGCCTTTCTTAAGTACATGTTTAAAACGCATAAACATGACATATCACACCCCCTCCCAAATTCCCTTTTAACTTGAGAGAGAGAGGACGTAAATACATGTTAAAACTATTCCCTGTACACCTGCTTCACCAGCTACCTAAAATTCCTCACACAAAACAACATAACTATAGCTTGTTTACACTCTTAACACATCAAACATTACATCACAGTACTTACACCAGAGTATCATGTACATAAACAGAGTCCACAACATTTCCTACAAAACATTACCCACCCTAAGCTACGTAAAACATCCCTAAATCAAAGGCAAGAAAAACACTTTTTAGGTGTTTTTCAGAGGTGCTATATTTTTATATTTTTTTCCACTTATTTTGCTCTCTATTACAATCACTCTTATGAAAATGATCTTTTAAATTATTTCCTAAATTAAATAATTAAGATAAGAATTATGTTTTTGAAAAAGTTTTTACTCCTCCATTTTAGAGATTTTTTTTAATAGTAAAACCATATAAATGTTCGGATAATTATTCTGTTAAATTACTGATGGACTCCAATATGCTTAGGTTGATAAGTTATCATAAATTTAATTATATATCAACACTTTACCACTTTCCTCACTTGTTGCTTAAAATTTGTAGGAGATCCGACAAATGGAAATCAATATTATTTAGAAAAAAAAAATAACCTAACATAAGGTTTGAACCTAGAATATCCTACTATGATACCTTGTTAAACCATCAATTAATGTATAAGCTTTAAAGTTTTTGGTTTATTGGCAATCTAACCTGTTTTTTTTTTTTTTTAAAAAAAGGTTTGTTCTCTTCAATCTTTAAAATAAGTATGGAGGCCTTTTCCCTCCAAAATCTTAAAATAGGACACAAAAATCATTAAAAATTGGCCAAAAAGCAATTTCAAAACTACAGTTTTCTATATGACACAAGTGTGAATGACAACATCTATAAGTTGATTAAAATTAAACCAAGTACATTAATAGAAATGCAACCATAGTTTATTGTACTCTTGCTTACATTAAATGTGGAAAAAATTCCATGTGTATTCTAGTTTGAAAAATCATACAAAATGGTGAGATGCACAGAGGAGCCAAAATTTTCCAACAAAAAAAATAGAAGTTTATTTTTCGATCTCTCACACCATGAAGTCTAAAACATGCAGTGATACAATTGAAATCGTCGAGCTTTTGAACGTATGTTGGCTTGAAATCCATGGAAAGATGAAGACATGTGAGCTCTCACCCCGAATACGATATGAAGCCGCATTTGAGGTAATGATCAAAGAGGCAGCCTACGGATGGGATGTTCCAGTCAACATTAGACTTAAAAGGCCAGATGGGAGCAAGCAAGAGCATAAAGAAAACTTAGAGCAGAGGCCTCGAGGGCGGTGGGTCGAGATTCCGATAGGTGATTTCGTTGTTCATGATCATGAGGGCGGTGGTGAGATCGAGTTCAGCATGTATGAACATGAAGGAGGGATGTGGAAGAGAGGGATGCTCCTAAAAGGTCTTGTGATTCGATCAAAGGGGTCCATTTGA ATGGGATCTGGGTGGTCGGAAGAGCAGGCTGCACAGCCGCCGCAGCAGCCAGCTACGGTTGGCGCAGCCATAAGAAACAACGAGCATAGCAGCGGCAACTCGAGTAATAATAATTTAAAGGAAGAAAAAGAGAAGGTGGTGAAAGGGAAATTAGGAGAAGAAGTGAAGCTTGGCCATGGGTTTGAAGCTATTTTGAAAGATGCAGATTTGCCAGTGGATAGGTCTTCCTTGGATAAGCTCTATGATCAACTCTATGCGGGGATCTTCTTGAACAAACGAACTAAGGCAAGTGTAACACTAGAAATGATATTTACTTTTACAAATAAGAAGTTGAACAGTAACTGTTTCATGTTATTTCCAAGAGCTCTCTCAATAACTTGGGCTGAAGAGAACAAGTACTGGAGATGGAAATCCATGGAAGAGTCTAGTGATACAATTGAAATCGTCGAGCTTTTGAACGTATGTTGGCTTGAAATCCATGGAAAGATGAAGACATGTGAGCTCTCACCCCGAATACGATATGAAGCCGCATTTGAGGTAATGATCAAAGAGGCAGCCTACGGATGGGATGTTCCAGTCAACATTAGACTTAAAAGGCCAGATGGGAGCAAGCAAGAGCATAAAGAAAACTTAGAGCAGAGGCCTCGAGGGCGGTGGGTCGAGATTCCGATAGGTGATTTCGTTGTTCATGATCATGAGGGCGGTGGTGAGATCGAGTTCAGCATGTATGAACATGAAGGAGGGATGTGGAAGAGAGGGATGCTCCTAAAAGGTCTTGTGATTCGATCAAAGGGGTCCATTTGA ATGGGATCTGGGTGGTCGGAAGAGCAGGCTGCACAGCCGCCGCAGCAGCCAGCTACGGTTGGCGCAGCCATAAGAAACAACGAGCATAGCAGCGGCAACTCGAGTAATAATAATTTAAAGGAAGAAAAAGAGAAGGTGGTGAAAGGGAAATTAGGAGAAGAAGTGAAGCTTGGCCATGGGTTTGAAGCTATTTTGAAAGATGCAGATTTGCCAGTGGATAGGTCTTCCTTGGATAAGCTCTATGATCAACTCTATGCGGGGATCTTCTTGAACAAACGAACTAAGGCAAGTGTAACACTAGAAATGATATTTACTTTTACAAATAAGAAGTTGAACAGTAACTGTTTCATGTTATTTCCAAGAGCTCTCTCAATAACTTGGGCTGAAGAGAACAAGTACTGGAGATGGAAATCCATGGAAGAGTCTAGTGATACAATTGAAATCGTCGAGCTTTTGAACGTATGTTGGCTTGAAATCCATGGAAAGATGAAGACATGTGAGCTCTCACCCCGAATACGATATGAAGCCGCATTTGAGGTAATGATCAAAGAGGCAGCCTACGGATGGGATGTTCCAGTCAACATTAGACTTAAAAGGCCAGATGGGAGCAAGCAAGAGCATAAAGAAAACTTAGAGCAGAGGCCTCGAGGGCGGTGGGTCGAGATTCCGATAGGTGATTTCGTTGTTCATGATCATGAGGGCGGTGGTGAGATCGAGTTCAGCATGTATGAACATGAAGGAGGGATGTGGAAGAGAGGGATGCTCCTAAAAGGTCTTGTGATTCGATCAAAGGGGTCCATTTGA MGSGWSEEQAAQPPQQPATVGAAIRNNEHSSGNSSNNNLKEEKEKVVKGKLGEEVKLGHGFEAILKDADLPVDRSSLDKLYDQLYAGIFLNKRTKASVTLEMIFTFTNKKLNSNCFMLFPRALSITWAEENKYWRWKSMEESSDTIEIVELLNVCWLEIHGKMKTCELSPRIRYEAAFEVMIKEAAYGWDVPVNIRLKRPDGSKQEHKENLEQRPRGRWVEIPIGDFVVHDHEGGGEIEFSMYEHEGGMWKRGMLLKGLVIRSKGSI
BLAST of ClCG01G009230 vs. Swiss-Prot
Match: LEC_LUFAC (Lectin OS=Luffa acutangula PE=1 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 5.8e-53 Identity = 107/215 (49.77%), Postives = 142/215 (66.05%), Query Frame = 1
BLAST of ClCG01G009230 vs. Swiss-Prot
Match: P2A01_ARATH (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.1e-46 Identity = 97/213 (45.54%), Postives = 138/213 (64.79%), Query Frame = 1
BLAST of ClCG01G009230 vs. Swiss-Prot
Match: P2A04_ARATH (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 OS=Arabidopsis thaliana GN=PP2A4 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 3.5e-26 Identity = 59/153 (38.56%), Postives = 89/153 (58.17%), Query Frame = 1
BLAST of ClCG01G009230 vs. Swiss-Prot
Match: P2A05_ARATH (Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.8e-22 Identity = 56/156 (35.90%), Postives = 85/156 (54.49%), Query Frame = 1
BLAST of ClCG01G009230 vs. Swiss-Prot
Match: P2A02_ARATH (Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana GN=PP2A2 PE=2 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.4e-22 Identity = 49/118 (41.53%), Postives = 71/118 (60.17%), Query Frame = 1
BLAST of ClCG01G009230 vs. TrEMBL
Match: A0A0A0LYN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703070 PE=4 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 9.4e-119 Identity = 206/265 (77.74%), Postives = 233/265 (87.92%), Query Frame = 1
BLAST of ClCG01G009230 vs. TrEMBL
Match: A0A067JUE7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00141 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 1.6e-65 Identity = 127/267 (47.57%), Postives = 178/267 (66.67%), Query Frame = 1
BLAST of ClCG01G009230 vs. TrEMBL
Match: A0A067GCT8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025108mg PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.3e-64 Identity = 130/268 (48.51%), Postives = 181/268 (67.54%), Query Frame = 1
BLAST of ClCG01G009230 vs. TrEMBL
Match: V4TN87_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016359mg PE=4 SV=1) HSP 1 Score: 254.6 bits (649), Expect = 1.3e-64 Identity = 129/268 (48.13%), Postives = 181/268 (67.54%), Query Frame = 1
BLAST of ClCG01G009230 vs. TrEMBL
Match: A0A067GCI5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025108mg PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 1.5e-63 Identity = 129/268 (48.13%), Postives = 179/268 (66.79%), Query Frame = 1
BLAST of ClCG01G009230 vs. TAIR10
Match: AT4G19840.1 (AT4G19840.1 phloem protein 2-A1) HSP 1 Score: 188.3 bits (477), Expect = 5.9e-48 Identity = 97/213 (45.54%), Postives = 138/213 (64.79%), Query Frame = 1
BLAST of ClCG01G009230 vs. TAIR10
Match: AT4G19850.2 (AT4G19850.2 lectin-related) HSP 1 Score: 120.2 bits (300), Expect = 2.0e-27 Identity = 69/183 (37.70%), Postives = 99/183 (54.10%), Query Frame = 1
BLAST of ClCG01G009230 vs. TAIR10
Match: AT1G33920.1 (AT1G33920.1 phloem protein 2-A4) HSP 1 Score: 120.2 bits (300), Expect = 2.0e-27 Identity = 59/153 (38.56%), Postives = 89/153 (58.17%), Query Frame = 1
BLAST of ClCG01G009230 vs. TAIR10
Match: AT1G65390.1 (AT1G65390.1 phloem protein 2 A5) HSP 1 Score: 107.8 bits (268), Expect = 1.0e-23 Identity = 56/156 (35.90%), Postives = 85/156 (54.49%), Query Frame = 1
BLAST of ClCG01G009230 vs. TAIR10
Match: AT5G45090.1 (AT5G45090.1 phloem protein 2-A7) HSP 1 Score: 98.6 bits (244), Expect = 6.2e-21 Identity = 56/163 (34.36%), Postives = 86/163 (52.76%), Query Frame = 1
BLAST of ClCG01G009230 vs. NCBI nr
Match: gi|449455417|ref|XP_004145449.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1 [Cucumis sativus]) HSP 1 Score: 434.5 bits (1116), Expect = 1.3e-118 Identity = 206/265 (77.74%), Postives = 233/265 (87.92%), Query Frame = 1
BLAST of ClCG01G009230 vs. NCBI nr
Match: gi|659131142|ref|XP_008465530.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1-like [Cucumis melo]) HSP 1 Score: 433.3 bits (1113), Expect = 3.0e-118 Identity = 208/267 (77.90%), Postives = 236/267 (88.39%), Query Frame = 1
BLAST of ClCG01G009230 vs. NCBI nr
Match: gi|698564992|ref|XP_009773135.1| (PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1 [Nicotiana sylvestris]) HSP 1 Score: 265.0 bits (676), Expect = 1.4e-67 Identity = 127/269 (47.21%), Postives = 176/269 (65.43%), Query Frame = 1
BLAST of ClCG01G009230 vs. NCBI nr
Match: gi|643708031|gb|KDP23149.1| (hypothetical protein JCGZ_00141 [Jatropha curcas]) HSP 1 Score: 257.7 bits (657), Expect = 2.3e-65 Identity = 127/267 (47.57%), Postives = 178/267 (66.67%), Query Frame = 1
BLAST of ClCG01G009230 vs. NCBI nr
Match: gi|802760719|ref|XP_012089530.1| (PREDICTED: uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like [Jatropha curcas]) HSP 1 Score: 257.7 bits (657), Expect = 2.3e-65 Identity = 127/267 (47.57%), Postives = 178/267 (66.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |