ClCG01G009210 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CATCTTAATTGGCTTCAATCAAAATAGCCTCAAAATGAGCTCCGAGGAGAATGAAGCAAGAAAGATTTTACTTGGCCATTGCTTAGGTAATATTTTGCCACAGTCAGACGTGCCAATAAAATTACCTTCCTTGGTTCCGCTTTTTGATCAACTTCTTGATGGGATCCCCTTGAACAACGGAGCTCAGGTAAGTATAACAATATATTTTATTTTTAAAAATGTTTTAAAAAATAGAAAAATAGTTTAAAATAATTACAAATATAGTAAAATTTTAGTTTCTATTGGTGATAGACCGCGCTAGACCCAAATAGACACCTATCAATAGATACAAATAGATGTCTATTTAGATCTATCGGTTTTTATCACAAATAGAAAGTAAAATTTTGTTATATGTATAAATAGTTTGATATTTTTTTATGTTATAATAATTTTCTTTATTTTTACTTTATTTACTTATTAATTACGTTGAATGCAGAAATTCTATTTGAATAAGGAGACAAACAGTAATCGAGTGTTTATACCAGTGAAATCACTCACAATATATGGGATTGATGATCCCCGATACTGGATACTGTCATGCCTTGAAGAGTGGGGGTATAATCTTAACCCCATATTTTCTTTGTTGCAAACCGAAATGATTACTAATTTCAAACCATATAAAAACCTTTGGCAGTATTAAATTATTAATAATATATGTTTAGGTTTGACTATGAATGAGCTTAATATTTTCTAAAAGACGTTGGGTATGGTTTTGAAGAAAAGTTGTATCCCTGTTCTTAATTAGAATTTTTTATTTTGCGTCGAGTTTTGATTTGATCCCTATGTTTTAAAATATTAATATTTAATTCTTAAGTTTTGAGTTTGGTGCCAATTTAGCCCTTTAATTTCAAAATATTACAATTTTAACTTTCAGATTTGAGTTTTCTTTCAATTTAGTGGTCTTTAAGTTCCAATATCTACCATAATTTTAACCTCATATTTCATATCCAGTAATTGGCATCAATGTTGATTAATTAACTTTAAATAATTATAAAGTGGAATTTTAAATTCAATTTTAACAATAATGGAAATATAGTGAAACTTAATTAATTATAGTTATTATAATTATTTTAAATTAATTAATGGAAAGTTATTTTAAATTACAAATAATTGTAAAATATCAGTCTATTTGCGATATACCATGATAGATTGCGAGAGATTAGCATATGTGAATATCATGATAGACTGCAATAGACTACTATCTGTGCCTATCATGATAGACACAAATAGTACTCTATTGCGGTCTATTACAGACAGACAGCAAAAAAATTTTATATTTACAAATATTTTAATTCATTTTATTATATTAGAAACAAGCCTTAATCAATGGACATTAAAACAAATATAGAAAACTGAATATTTAGTGAAAAATCAAGGTTAAAAGTGTAAATCTTGAAACTTAGGAATCAAATTGAAAGAAAACTCAAATCTAAAGGGTAAATTTGAAACATTTTGAAACTTGGGGACTTCATTGAAATTAAACTAAAAACTTAAGTACTAAATATGTAAGATTAGAAAAGAGGGACCAAATAAAAACTAGAACCTAAACCTAAGGTCGAAAAAGATAGTTTTCCCACTCTGGTGTTGTAACTAATTTGAAGTTAACTCAAGTAGTTAAAACGTTATATTGGCAACGATCTCACAATGATGTCTAAAAACGTGCAGTAAGAAAGTGACCATCGCTGAAGTTAGAGGAATAAGTCAGTTTGATATTAGTGGATCAGTGAAGACAGGTTTGCTGACACCAAAGGTAATATATATAGTAGTATTTGTGGTATTGCTCACTATTGATGCCAAGGGATGGACGTCTCCTGTGAACCTGATACTGAAGAAGCCAAATGGGAGCAAGATAGAGAGCAAAATAAGCCTAGAGGGGAAGCCAAGAGGAGAGTATTTCGAGGTAATTGTTGGAGAACTCACATTGGATGACCGCGGATGTGCCGATACCAGCGTGATCGAGTTCGGCATGTATGAACATGGAAGTCAACTCAAAAGTGGGCTGGTCTTGAAAGGTGGCCTTTTACGATCAAAGGCCTCACCTGGCTGCCCCCATGCTGATACCAAGTAGTTCTAGTTTTTTCAAACTCAAACACTACTTATACCTCAAAAAAAGAAAAAAAAGAAAAAATGAAGACACACAACTACCTTTTATAATCAAATATATATATATATAGTATATGTAATAATAATAGCATACAAACATAAATAATATAC CATCTTAATTGGCTTCAATCAAAATAGCCTCAAAATGAGCTCCGAGGAGAATGAAGCAAGAAAGATTTTACTTGGCCATTGCTTAGGTAATATTTTGCCACAGTCAGACGTGCCAATAAAATTACCTTCCTTGGTTCCGCTTTTTGATCAACTTCTTGATGGGATCCCCTTGAACAACGGAGCTCAGAAATTCTATTTGAATAAGGAGACAAACAGTAATCGAGTGTTTATACCAGTGAAATCACTCACAATATATGGGATTGATGATCCCCGATACTGGATACTGTCATGCCTTGAAGAGTGGGGTAAGAAAGTGACCATCGCTGAAGTTAGAGGAATAAGTCAGTTTGATATTAGTGGATCAGTGAAGACAGGTTTGCTGACACCAAAGGTAATATATATAGTAGTATTTGTGGTATTGCTCACTATTGATGCCAAGGGATGGACGTCTCCTGTGAACCTGATACTGAAGAAGCCAAATGGGAGCAAGATAGAGAGCAAAATAAGCCTAGAGGGGAAGCCAAGAGGAGAGTATTTCGAGGTAATTGTTGGAGAACTCACATTGGATGACCGCGGATGTGCCGATACCAGCGTGATCGAGTTCGGCATGTATGAACATGGAAGTCAACTCAAAAGTGGGCTGGTCTTGAAAGGTGGCCTTTTACGATCAAAGGCCTCACCTGGCTGCCCCCATGCTGATACCAAGTAGTTCTAGTTTTTTCAAACTCAAACACTACTTATACCTCAAAAAAAGAAAAAAAAGAAAAAATGAAGACACACAACTACCTTTTATAATCAAATATATATATATATAGTATATGTAATAATAATAGCATACAAACATAAATAATATAC ATGAGCTCCGAGGAGAATGAAGCAAGAAAGATTTTACTTGGCCATTGCTTAGGTAATATTTTGCCACAGTCAGACGTGCCAATAAAATTACCTTCCTTGGTTCCGCTTTTTGATCAACTTCTTGATGGGATCCCCTTGAACAACGGAGCTCAGAAATTCTATTTGAATAAGGAGACAAACAGTAATCGAGTGTTTATACCAGTGAAATCACTCACAATATATGGGATTGATGATCCCCGATACTGGATACTGTCATGCCTTGAAGAGTGGGGTAAGAAAGTGACCATCGCTGAAGTTAGAGGAATAAGTCAGTTTGATATTAGTGGATCAGTGAAGACAGGTTTGCTGACACCAAAGGTAATATATATAGTAGTATTTGTGGTATTGCTCACTATTGATGCCAAGGGATGGACGTCTCCTGTGAACCTGATACTGAAGAAGCCAAATGGGAGCAAGATAGAGAGCAAAATAAGCCTAGAGGGGAAGCCAAGAGGAGAGTATTTCGAGGTAATTGTTGGAGAACTCACATTGGATGACCGCGGATGTGCCGATACCAGCGTGATCGAGTTCGGCATGTATGAACATGGAAGTCAACTCAAAAGTGGGCTGGTCTTGAAAGGTGGCCTTTTACGATCAAAGGCCTCACCTGGCTGCCCCCATGCTGATACCAAGTAG MSSEENEARKILLGHCLGNILPQSDVPIKLPSLVPLFDQLLDGIPLNNGAQKFYLNKETNSNRVFIPVKSLTIYGIDDPRYWILSCLEEWGKKVTIAEVRGISQFDISGSVKTGLLTPKVIYIVVFVVLLTIDAKGWTSPVNLILKKPNGSKIESKISLEGKPRGEYFEVIVGELTLDDRGCADTSVIEFGMYEHGSQLKSGLVLKGGLLRSKASPGCPHADTK
BLAST of ClCG01G009210 vs. Swiss-Prot
Match: LEC_LUFAC (Lectin OS=Luffa acutangula PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.6e-27 Identity = 71/206 (34.47%), Postives = 118/206 (57.28%), Query Frame = 1
BLAST of ClCG01G009210 vs. Swiss-Prot
Match: P2A01_ARATH (Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana GN=PP2A1 PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 8.3e-21 Identity = 76/198 (38.38%), Postives = 99/198 (50.00%), Query Frame = 1
BLAST of ClCG01G009210 vs. Swiss-Prot
Match: P2A05_ARATH (Protein PHLOEM PROTEIN 2-LIKE A5 OS=Arabidopsis thaliana GN=PP2A5 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 5.1e-10 Identity = 55/184 (29.89%), Postives = 83/184 (45.11%), Query Frame = 1
BLAST of ClCG01G009210 vs. Swiss-Prot
Match: P2A02_ARATH (Protein PHLOEM PROTEIN 2-LIKE A2 OS=Arabidopsis thaliana GN=PP2A2 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09 Identity = 41/122 (33.61%), Postives = 60/122 (49.18%), Query Frame = 1
BLAST of ClCG01G009210 vs. Swiss-Prot
Match: P2A07_ARATH (Uncharacterized protein PHLOEM PROTEIN 2-LIKE A7 OS=Arabidopsis thaliana GN=PP2A7 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.9e-09 Identity = 53/165 (32.12%), Postives = 77/165 (46.67%), Query Frame = 1
BLAST of ClCG01G009210 vs. TrEMBL
Match: Q39461_9ROSI (Phloem protein 2 OS=Cucurbita argyrosperma GN=PP2 PE=2 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 7.1e-43 Identity = 99/223 (44.39%), Postives = 138/223 (61.88%), Query Frame = 1
BLAST of ClCG01G009210 vs. TrEMBL
Match: Q8LK67_9ROSI (Phloem lectin OS=Cucurbita argyrosperma subsp. sororia GN=PP2 PE=2 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 6.6e-41 Identity = 95/223 (42.60%), Postives = 136/223 (60.99%), Query Frame = 1
BLAST of ClCG01G009210 vs. TrEMBL
Match: Q9LLT3_CUCMO (Phloem protein 2 OS=Cucurbita moschata GN=pp2 PE=2 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 2.5e-40 Identity = 95/223 (42.60%), Postives = 136/223 (60.99%), Query Frame = 1
BLAST of ClCG01G009210 vs. TrEMBL
Match: Q39462_9ROSI (Phloem protein 2 OS=Cucurbita argyrosperma GN=PP2 PE=2 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 3.3e-40 Identity = 96/223 (43.05%), Postives = 135/223 (60.54%), Query Frame = 1
BLAST of ClCG01G009210 vs. TrEMBL
Match: A0A0A0M183_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G703060 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 8.9e-38 Identity = 86/219 (39.27%), Postives = 139/219 (63.47%), Query Frame = 1
BLAST of ClCG01G009210 vs. TAIR10
Match: AT4G19840.1 (AT4G19840.1 phloem protein 2-A1) HSP 1 Score: 102.1 bits (253), Expect = 4.7e-22 Identity = 76/198 (38.38%), Postives = 99/198 (50.00%), Query Frame = 1
BLAST of ClCG01G009210 vs. TAIR10
Match: AT1G65390.1 (AT1G65390.1 phloem protein 2 A5) HSP 1 Score: 66.2 bits (160), Expect = 2.9e-11 Identity = 55/184 (29.89%), Postives = 83/184 (45.11%), Query Frame = 1
BLAST of ClCG01G009210 vs. TAIR10
Match: AT5G45090.1 (AT5G45090.1 phloem protein 2-A7) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10 Identity = 53/165 (32.12%), Postives = 77/165 (46.67%), Query Frame = 1
BLAST of ClCG01G009210 vs. TAIR10
Match: AT5G45070.1 (AT5G45070.1 phloem protein 2-A8) HSP 1 Score: 52.4 bits (124), Expect = 4.3e-07 Identity = 49/163 (30.06%), Postives = 75/163 (46.01%), Query Frame = 1
BLAST of ClCG01G009210 vs. TAIR10
Match: AT4G19850.2 (AT4G19850.2 lectin-related) HSP 1 Score: 50.8 bits (120), Expect = 1.2e-06 Identity = 32/101 (31.68%), Postives = 49/101 (48.51%), Query Frame = 1
BLAST of ClCG01G009210 vs. NCBI nr
Match: gi|508447|gb|AAA92465.1| (phloem protein 2 [Cucurbita argyrosperma]) HSP 1 Score: 182.2 bits (461), Expect = 1.0e-42 Identity = 99/223 (44.39%), Postives = 138/223 (61.88%), Query Frame = 1
BLAST of ClCG01G009210 vs. NCBI nr
Match: gi|21952272|gb|AAM82558.1|AF520582_1 (phloem lectin [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 175.6 bits (444), Expect = 9.5e-41 Identity = 95/223 (42.60%), Postives = 136/223 (60.99%), Query Frame = 1
BLAST of ClCG01G009210 vs. NCBI nr
Match: gi|8307830|gb|AAF74345.1|AF150627_1 (phloem protein 2 [Cucurbita moschata]) HSP 1 Score: 173.7 bits (439), Expect = 3.6e-40 Identity = 95/223 (42.60%), Postives = 136/223 (60.99%), Query Frame = 1
BLAST of ClCG01G009210 vs. NCBI nr
Match: gi|508449|gb|AAA33118.1| (phloem protein 2 [Cucurbita argyrosperma]) HSP 1 Score: 173.3 bits (438), Expect = 4.7e-40 Identity = 96/223 (43.05%), Postives = 135/223 (60.54%), Query Frame = 1
BLAST of ClCG01G009210 vs. NCBI nr
Match: gi|659118302|ref|XP_008459050.1| (PREDICTED: uncharacterized protein PHLOEM PROTEIN 2-LIKE A4 [Cucumis melo]) HSP 1 Score: 170.2 bits (430), Expect = 4.0e-39 Identity = 93/225 (41.33%), Postives = 139/225 (61.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |