ClCG01G008110 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G008110
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionPentatricopeptide repeat-containing protein, putative
LocationCG_Chr01 : 9337167 .. 9339679 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATATTTGCATTATCTCAAATTTGCCATATTTCATTAGTTTTCATAAAGGTAATTGAAATCAAATATCACACCTCAATTGAAATCAAATAGCACTTTCTCATCAAACATGGCTTCCAACTCCAAGACTGGCTTATGCTTCTCCCATTGTTGCAATTTCTACCAAACCTAACCTCTCCTCTCTATTTACTCACTCTCCAACAATTCCATCATCTATAGTATCATTATAGATGGGCTCTGTAAGGATGGACAGGAATCTCAAGGAATGATTCCCAATGTTATGGTATTGCCAAAGAGTCATGTATATACCGGATTTTCTTAGATGGGCTATGTAAGAAATGGTTGTTTATTTGAAGCGACACAACTTTTTAATGAGTTAAAATCATACAACTTGAAATTGAACATTGAAATCTTTAATTGCCTAATTGATGACCTATGTAAAGTAGGAAAACTTGAAACTGCTTGAGAGTTGTTGCGTTCAAATTTTGTTTGAAAGAATTGTGAACCTAGCCTTATGTCGTGCTTATAAATTGAAAAATATTTTAGTTAAACACAAGTTTTCCTATAAAAAATCAAAGTGCAAATTTTGATAGGTTTCCTGGAGAATCCAGGGTTGAACACGAAAATTTTAAAAAAATTATATGTTAGAACCTTGTTGACTTAATGCAATTTTCTATACAAAGAAGCCTTGAATATAATACGTACAAATGAATATATACAAGTGTGAAGATGGTTGGATGAACATGGAAGATGATGTTGTGTGGAATGTGACAATGGTGAAAATTGTGAGTACAATTACAATCACAATCAAATAGCATGCATTGAGGAATGGAAAAATCAATGAAGAAAGTAGGGTTGAGGGGAGTTCACTACCATTTTCTTAGGTCATGCATAAACATGCGTTCATATTCGAAACTCTAAAGTTAAGAAATAACCTCTCAATGCTTCTAAGCCACATTTATCTTATCTCTAAGATGCATGCAGTGTTGAAAGAATAATGTCCAACCACCGATTGCAACTTCTTGATTTCAGAGGCTCTAGATAGTGGCTGTTTGAAGTATTTGCACATATGGAGGGGATGAACTCTCTCTTTTCGATAGGTAAAATTGAGCTCTCACTCAGAATTTCTCAAAGAGAAGCTCAAGGTTGAAGATGGAAATGGAGAAGGAGGACATTCGACATAACTTTCACTATATCATCTTTCAATCATCTGAAGTTGAATTCTTGCGGGTTATTTATAGGCGTCCAAAAGGTAGTTCTCATGATTGCATAACACCTTTGAATTTAATTTCATGCCCTTCTGCGCAGATTTTTTCAATTAGTCATCCACTTGCATTTTGACACGACAGTCACCGCCAACGCGTTCATCAGTTTTCTTTTTGATTCGTCTCGACGTCGAGTTCTCCGACACGAGGATCAACTGTTGGCTTGATCTAACTTTATCTGGTAGCATCTTTGATTGTCCTTGGCTATTTTTCGACTTCTTGTTATTGAAATCTTGCATCCAAAAGATATAAAAACCATAATTTCTAGGATAAAAGATTTTGTAAACAACTTGAATAGATCTTTTTATGCTATTTTCTTCTCAACTTAATGTATTTTCTTGTAAATTACTCTAATTATTCCAAATAAAGAAACTTGTATTTCTACAAGTTGTTAAGAGCTTTTCAAAAACCTATCCCAATAAGGGTTTCAACTAGATTTTGTGACTTATTCTATTATGATCCATGAGTTTTTTTAGGAGGGACAAGTAGATAACGCAAATATTTTGTTTCAAAGATGGAAAAAAAATGGTTGTACCCCCAACATAATTACTTATAATATACTTTTGCGTGGTTTATGCCAAAGTAATAAATTAGATGAGGTGGTTGAACTTCTTCATAGGATGGTTCATAAGGATGTGTCACCAGATGCCATCACTTGCACCAAAGCTAAAAAATATAAAGAATGTTTGGACTTACTTCCAAGGTTTACTATCCAAGAGTGTCGATGTTGATAATAGAACAGTTTCCATAGACTTATTAAGAGCTATATGACTTGAAATTTTCTACTCAGCTTCAAGAAGGAACGACACATAGGTTCATGGACTCGATAGGTTTCCATTTCTTTTCCCTCTCTATTCCAACTTTTATTTTTGTAGATTGCTTGCCTTTATAGATCGTTTCATCGTGATTTCTGATATGTGTTATTGAAGATTACTTGGTTGTAGTTTTTACTCTTTCTTCATTGATCATTTTTGTTTTGCTAATTGATTTTAGGAGTTAAAAAAATTGATAAGGGACAAACACTTCTTCAACTAATGTGGTACATGAGTTAGGTTCATTGACAAATTCACCGGGACTCTTGGCCTTCTAATAAAGTTTTAATTAGTATGTAGATTGATCTGTTGATTACTTTATTTCTTTATTTTTTTATTTCAATAATTTTTCTAAACTTCTTTGTACTTGATATTTTTTTTTTTTTTTTTTTTTGTAGTTTGATGAAGAGTTATTCACTGCGTGCAATGTCTTGA

mRNA sequence

ATGAATATTTGCATTATCTCAAATTTGCCATATTTCATTAGTTTTCATAAAGATGGGCTCTGTAAGGATGGACAGGAATCTCAAGGAATGATTCCCAATGTTATGGTATTGCCAAAGAGTCATGAGGGACAAGTAGATAACGCAAATATTTTGTTTCAAAGATGGAAAAAAAATGGTTGTACCCCCAACATAATTACTTATAATATACTTTTGCGTGGTTTATGCCAAAGTAATAAATTAGATGAGGTGGTTGAACTTCTTCATAGGATGGTTCATAAGGATGTGTCACCAGATGCCATCACTTGCACCAAAGCTAAAAAATATAAAGAATGTTTGGACTTACTTCCAAGTTTGATGAAGAGTTATTCACTGCGTGCAATGTCTTGA

Coding sequence (CDS)

ATGAATATTTGCATTATCTCAAATTTGCCATATTTCATTAGTTTTCATAAAGATGGGCTCTGTAAGGATGGACAGGAATCTCAAGGAATGATTCCCAATGTTATGGTATTGCCAAAGAGTCATGAGGGACAAGTAGATAACGCAAATATTTTGTTTCAAAGATGGAAAAAAAATGGTTGTACCCCCAACATAATTACTTATAATATACTTTTGCGTGGTTTATGCCAAAGTAATAAATTAGATGAGGTGGTTGAACTTCTTCATAGGATGGTTCATAAGGATGTGTCACCAGATGCCATCACTTGCACCAAAGCTAAAAAATATAAAGAATGTTTGGACTTACTTCCAAGTTTGATGAAGAGTTATTCACTGCGTGCAATGTCTTGA

Protein sequence

MNICIISNLPYFISFHKDGLCKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAITCTKAKKYKECLDLLPSLMKSYSLRAMS
Homology
[Close]
BLAST of ClCG01G008110 vs. Swiss-Prot
Match: PPR38_ARATH (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 9.3e-09
Identity = 37/105 (35.24%), Postives = 50/105 (47.62%), Query Frame = 1 

Query: 19  GLCKDGQESQG-----------MIPNVMVLPKS-----HEGQVDNANILFQRWKKNGCTP 78
           GLCK G+ + G           ++PNV+           EG++  AN L++     G +P
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331

Query: 79  NIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAITCTKAKK 108
           NIITYN L+ G C  N+L E   +L  MV    SPD +T T   K
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376


HSP 2 Score: 55.5 bits (132), Expect = 5.1e-07
Identity = 31/109 (28.44%), Postives = 51/109 (46.79%), Query Frame = 1 

Query: 22  KDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLD 81
           K G E      N ++     EG+V  A +L  R  +NGC P+++TYN ++ G+C+S    
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210

Query: 82  EVVELLHRMVHKDVSPDAITCT---KAKKYKECLDLLPSLMKSYSLRAM 128
             ++LL +M  ++V  D  T +    +     C+D   SL K    + +
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259


HSP 3 Score: 49.3 bits (116), Expect = 3.7e-05
Identity = 29/86 (33.72%), Postives = 41/86 (47.67%), Query Frame = 1 

Query: 44  QVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT-- 103
           +VD+   +F+   K G   N +TY+IL++G CQS K+    EL   MV   V PD +T  
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442

Query: 104 ------CTKAKKYKECLDLLPSLMKS 122
                 C    K ++ L++   L KS
Sbjct: 443 ILLDGLCDNG-KLEKALEIFEDLQKS 467


HSP 4 Score: 48.1 bits (113), Expect = 8.2e-05
Identity = 22/60 (36.67%), Postives = 36/60 (60.00%), Query Frame = 1 

Query: 42  EGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 101
           +G +D A  LF+  +  G   +++TYN L+RGLC++ K ++   LL  MV +++ P+ IT
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300


HSP 5 Score: 44.7 bits (104), Expect = 9.0e-04
Identity = 21/67 (31.34%), Postives = 36/67 (53.73%), Query Frame = 1 

Query: 20  LCKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNK 79
           + K G  +  +  +++V      G++  A  LFQ    +G  P+++TY ILL GLC + K
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453

Query: 80  LDEVVEL 87
           L++ +E+
Sbjct: 454 LEKALEI 460


HSP 6 Score: 42.4 bits (98), Expect = 4.5e-03
Identity = 28/100 (28.00%), Postives = 45/100 (45.00%), Query Frame = 1 

Query: 18  DGLCKDG-----------QESQGMIPNV-----MVLPKSHEGQVDNANILFQRWKKNGCT 77
           D LC+DG            E++G+  +V     +V      G+ ++  +L +        
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           PN+IT+N+LL    +  KL E  EL   M+ + +SP+ IT
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335


HSP 7 Score: 41.6 bits (96), Expect = 7.6e-03
Identity = 28/98 (28.57%), Postives = 43/98 (43.88%), Query Frame = 1 

Query: 18  DGLCKDGQES-----------QGMIPNVM-----VLPKSHEGQVDNANILFQRWKKNGCT 77
           +G+CK G+             +G+ PNVM     +     +G +  ANIL ++ +++G  
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 540

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDA 100
           PN  TYN L+R   +   L    +L+  M     S DA
Sbjct: 541 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADA 578

[Close]
BLAST of ClCG01G008110 vs. Swiss-Prot
Match: PP418_ARATH (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.7e-08
Identity = 32/82 (39.02%), Postives = 39/82 (47.56%), Query Frame = 1 

Query: 18  DGLCKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQS 77
           DGLCKDG+  Q M                    LF+     GC PN++TY  L+ GLC+ 
Sbjct: 270 DGLCKDGRSLQAME-------------------LFEMMMARGCRPNMVTYTTLITGLCKE 329

Query: 78  NKLDEVVELLHRMVHKDVSPDA 100
            K+ E VELL RM  + + PDA
Sbjct: 330 QKIQEAVELLDRMNLQGLKPDA 332


HSP 2 Score: 52.8 bits (125), Expect = 3.3e-06
Identity = 24/63 (38.10%), Postives = 33/63 (52.38%), Query Frame = 1 

Query: 41  HEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAI 100
           ++G VD    +F    K GC P+  TY  L+ GLC+  ++DE  +L   MV KD +P  +
Sbjct: 169 NDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVV 228

Query: 101 TCT 104
           T T
Sbjct: 229 TYT 231


HSP 3 Score: 50.8 bits (120), Expect = 1.3e-05
Identity = 21/59 (35.59%), Postives = 30/59 (50.85%), Query Frame = 1 

Query: 43  GQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           G++D A  LF    +  C P ++TY  L+ GLC S  +DE +  L  M  K + P+  T
Sbjct: 206 GRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFT 264


HSP 4 Score: 45.1 bits (105), Expect = 6.9e-04
Identity = 24/78 (30.77%), Postives = 38/78 (48.72%), Query Frame = 1 

Query: 45  VDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAITCT- 104
           VD A    +  K  G  PN+ TY+ L+ GLC+  +  + +EL   M+ +   P+ +T T 
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302

Query: 105 ------KAKKYKECLDLL 116
                 K +K +E ++LL
Sbjct: 303 LITGLCKEQKIQEAVELL 320

[Close]
BLAST of ClCG01G008110 vs. Swiss-Prot
Match: PPR28_ARATH (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 4.6e-08
Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 1 

Query: 26  ESQGMIP-----NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKL 85
           E  G +P     NVM+      G+++NA  +  R      +P+++TYN +LR LC S KL
Sbjct: 164 EGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKL 223

Query: 86  DEVVELLHRMVHKDVSPDAITCT 104
            + +E+L RM+ +D  PD IT T
Sbjct: 224 KQAMEVLDRMLQRDCYPDVITYT 243


HSP 2 Score: 53.9 bits (128), Expect = 1.5e-06
Identity = 21/68 (30.88%), Postives = 37/68 (54.41%), Query Frame = 1 

Query: 34  VMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHK 93
           +++     +  V +A  L    +  GCTP+++TYN+L+ G+C+  +LDE ++ L+ M   
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303

Query: 94  DVSPDAIT 102
              P+ IT
Sbjct: 304 GCQPNVIT 311


HSP 3 Score: 53.1 bits (126), Expect = 2.5e-06
Identity = 24/69 (34.78%), Postives = 39/69 (56.52%), Query Frame = 1 

Query: 33  NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVH 92
           N M+     +G+V++A  +  +    GC+P +ITYN ++ GL ++ K  + ++LL  M  
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477

Query: 93  KDVSPDAIT 102
           KD+ PD IT
Sbjct: 478 KDLKPDTIT 486


HSP 4 Score: 52.4 bits (124), Expect = 4.3e-06
Identity = 25/69 (36.23%), Postives = 37/69 (53.62%), Query Frame = 1 

Query: 33  NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVH 92
           NV+V     EG++D A         +GC PN+IT+NI+LR +C + +  +  +LL  M+ 
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337

Query: 93  KDVSPDAIT 102
           K  SP  +T
Sbjct: 338 KGFSPSVVT 346


HSP 5 Score: 51.2 bits (121), Expect = 9.6e-06
Identity = 23/60 (38.33%), Postives = 35/60 (58.33%), Query Frame = 1 

Query: 42  EGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 101
           E ++D A    +R    GC P+I+TYN +L  LC+  K+++ VE+L+++  K  SP  IT
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451


HSP 6 Score: 50.4 bits (119), Expect = 1.6e-05
Identity = 28/86 (32.56%), Postives = 45/86 (52.33%), Query Frame = 1 

Query: 40  SHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDA 99
           S EG+VD A   F  +++ G  PN +T+N ++ GLC+S + D  ++ L  M+++   P+ 
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554

Query: 100 ITCT---KAKKY----KECLDLLPSL 119
            + T   +   Y    KE L+LL  L
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNEL 580


HSP 7 Score: 41.2 bits (95), Expect = 1.0e-02
Identity = 25/100 (25.00%), Postives = 50/100 (50.00%), Query Frame = 1 

Query: 18  DGLCKDGQ-----------ESQGMIPNVM---VLPKS--HEGQVDNANILFQRWKKNGCT 77
           +G+CK+G+            S G  PNV+   ++ +S    G+  +A  L     + G +
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           P+++T+NIL+  LC+   L   +++L +M      P++++
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381


HSP 8 Score: 40.8 bits (94), Expect = 1.3e-02
Identity = 18/69 (26.09%), Postives = 34/69 (49.28%), Query Frame = 1 

Query: 33  NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVH 92
           N ++      G++  A  +  R  +  C P++ITY IL+   C+ + +   ++LL  M  
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267

Query: 93  KDVSPDAIT 102
           +  +PD +T
Sbjct: 268 RGCTPDVVT 276


HSP 9 Score: 34.3 bits (77), Expect = 1.2e+00
Identity = 22/73 (30.14%), Postives = 29/73 (39.73%), Query Frame = 1 

Query: 26  ESQGMIPNVMVLPKSHEG-----QVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKL 85
           E  G+ PN +       G     Q D A          GC PN  +Y IL+ GL      
Sbjct: 511 ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMA 570

Query: 86  DEVVELLHRMVHK 94
            E +ELL+ + +K
Sbjct: 571 KEALELLNELCNK 583

[Close]
BLAST of ClCG01G008110 vs. Swiss-Prot
Match: PP327_ARATH (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 7.9e-08
Identity = 35/100 (35.00%), Postives = 45/100 (45.00%), Query Frame = 1 

Query: 18  DGLCK-----------DGQESQGMIP-----NVMVLPKSHEGQVDNANILFQRWKKNGCT 77
           DGLCK           D  +S+G  P     NV++     +G +     L       GC 
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           PN +TYN L+ GLC   KLD+ V LL RMV     P+ +T
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329


HSP 2 Score: 56.2 bits (134), Expect = 3.0e-07
Identity = 26/77 (33.77%), Postives = 45/77 (58.44%), Query Frame = 1 

Query: 31  IPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRM 90
           I +V++     EG+ + A  L+++  + GC PNI+ Y++L+ GLC+  K +E  E+L+RM
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423

Query: 91  VHKDVSPDAITCTKAKK 108
           +     P+A T +   K
Sbjct: 424 IASGCLPNAYTYSSLMK 440


HSP 3 Score: 48.1 bits (113), Expect = 8.2e-05
Identity = 22/55 (40.00%), Postives = 30/55 (54.55%), Query Frame = 1 

Query: 62  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAITC-----TKAKKYKEC 112
           P+++TYNILL GLC    +   V+LL+ M+ +   PD ITC     T ++K   C
Sbjct: 538 PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSC 592


HSP 4 Score: 47.8 bits (112), Expect = 1.1e-04
Identity = 27/88 (30.68%), Postives = 42/88 (47.73%), Query Frame = 1 

Query: 42  EGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 101
           E ++D A +L    +  GC+P+ + YN+L+ GLC+   L  V +L+  M  K   P+ +T
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT 294

Query: 102 --------CTKAKKYKECLDLLPSLMKS 122
                   C K K  K  + LL  ++ S
Sbjct: 295 YNTLIHGLCLKGKLDK-AVSLLERMVSS 321


HSP 5 Score: 42.0 bits (97), Expect = 5.8e-03
Identity = 26/89 (29.21%), Postives = 39/89 (43.82%), Query Frame = 1 

Query: 18  DGLCKDGQESQ-----------GMIPN-----VMVLPKSHEGQVDNANILFQRWKKNGCT 77
           DGLCK G  ++           G +PN      ++     +G++D A  L +R   + C 
Sbjct: 265 DGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRM 91
           PN +TY  L+ GL +  +  + V LL  M
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSM 353


HSP 6 Score: 39.7 bits (91), Expect = 2.9e-02
Identity = 20/56 (35.71%), Postives = 28/56 (50.00%), Query Frame = 1 

Query: 45  VDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAI 101
           VD A  +F+   +  C P+  TY  L+ GLC+  ++DE V LL  M  +  SP  +
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258


HSP 7 Score: 38.1 bits (87), Expect = 8.4e-02
Identity = 29/126 (23.02%), Postives = 51/126 (40.48%), Query Frame = 1 

Query: 15  FHKDGLC-----------KDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPN 74
           F K GLC           K G        +V++      G+V  A +++ +    G  P+
Sbjct: 442 FFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501

Query: 75  IITYNILLRGLCQSNKLDEVVELLHRMVHKD---VSPDAIT-------CTKAKKYKECLD 120
            + Y+ +++GLC    +D  ++L H M+ ++     PD +T           K     +D
Sbjct: 502 TVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVD 561

[Close]
BLAST of ClCG01G008110 vs. Swiss-Prot
Match: PP120_ARATH (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.3e-07
Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 1 

Query: 57  KNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           + GC PN+ T+NILL  LC+  KLDE + LL  M +K V+PDA+T
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568


HSP 2 Score: 51.6 bits (122), Expect = 7.4e-06
Identity = 36/124 (29.03%), Postives = 57/124 (45.97%), Query Frame = 1 

Query: 18  DGLCKDG-----------QESQGMIP-----NVMVLPKSHEGQVDNANILFQRWKKNGCT 77
           +GLCK G             S+G  P     N+++   S + +++NA  +      NG  
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT-------CTKAKKYKECLDL 119
           P++ TYN LL GLC+++K ++V+E    MV K  +P+  T         + +K  E L L
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553


HSP 3 Score: 48.1 bits (113), Expect = 8.2e-05
Identity = 21/60 (35.00%), Postives = 31/60 (51.67%), Query Frame = 1 

Query: 42  EGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 101
           +G V     L  +  K G  PN+ TYN+ ++GLCQ  +LD  V ++  ++ +   PD IT
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288


HSP 4 Score: 45.1 bits (105), Expect = 6.9e-04
Identity = 24/79 (30.38%), Postives = 42/79 (53.16%), Query Frame = 1 

Query: 28  QGMIPNVM-----VLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDE 87
           +G++PN+      +      G++D A  +     + G  P++ITYN L+ GLC+++K  E
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304

Query: 88  VVELLHRMVHKDVSPDAIT 102
               L +MV++ + PD+ T
Sbjct: 305 AEVYLGKMVNEGLEPDSYT 323


HSP 5 Score: 44.7 bits (104), Expect = 9.0e-04
Identity = 28/100 (28.00%), Postives = 46/100 (46.00%), Query Frame = 1 

Query: 18  DGLCKDGQESQ-----------GMIPNV-----MVLPKSHEGQVDNANILFQRWKKNGCT 77
           DGLC +G+ ++           G+ PNV     ++   S++G +  A  L     + G  
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           P + T+NIL+ GLC+   + +   L+  M+ K   PD  T
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463


HSP 6 Score: 41.2 bits (95), Expect = 1.0e-02
Identity = 27/105 (25.71%), Postives = 49/105 (46.67%), Query Frame = 1 

Query: 28  QGMIP-----NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDE 87
           +G+IP     N++V      G V +A+ L +     G  P+I T+NIL+ G     K++ 
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479

Query: 88  VVELLHRMVHKDVSPDAIT-------CTKAKKYKECLDLLPSLMK 121
            +E+L  M+   V PD  T         K  K+++ ++   ++++
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524


HSP 7 Score: 32.0 bits (71), Expect = 6.1e+00
Identity = 16/51 (31.37%), Postives = 27/51 (52.94%), Query Frame = 1 

Query: 51  LFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           LF +   +G +  + T+N LLR LC+   + E  +LL +++ + V P+  T
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFT 253


HSP 8 Score: 31.2 bits (69), Expect = 1.0e+01
Identity = 14/58 (24.14%), Postives = 26/58 (44.83%), Query Frame = 1 

Query: 33  NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRM 91
           N+++       ++D A  L +  K     P+ +T+  L+ G C++  LD    L  +M
Sbjct: 535 NILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592

[Close]
BLAST of ClCG01G008110 vs. TrEMBL
Match: M5VNT7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003905mg PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-16
Identity = 53/123 (43.09%), Postives = 73/123 (59.35%), Query Frame = 1 

Query: 18  DGLCKDGQ-----------ESQGMIPNV-----MVLPKSHEGQVDNANILFQRWKKNGCT 77
           DG CK G             ++G+ PNV     M+     EGQ++ AN LF   + NGC 
Sbjct: 409 DGFCKAGNLEVAWDLFLTLSNRGLAPNVITYSVMIHGLCIEGQLEKANGLFIEMEANGCA 468

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT-------CTKAKKYKECLDL 118
           PN+I YNIL+RG CQS+   +VVELLH MV +++SPD+ T        +K +KY++CLDL
Sbjct: 469 PNVIIYNILMRGFCQSDDSAKVVELLHMMVARNLSPDSCTISIVIDLLSKDEKYRKCLDL 528

[Close]
BLAST of ClCG01G008110 vs. TrEMBL
Match: M5VNT7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003905mg PE=4 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 4.1e-03
Identity = 21/59 (35.59%), Postives = 32/59 (54.24%), Query Frame = 1 

Query: 43  GQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           G+++ A  LF      GC P+ I+YN+L+ G C++  + E V L   M+ K   P  IT
Sbjct: 275 GRLNEARELFHSIPSRGCEPDAISYNVLINGYCKNRNIQEAVNLYKEMIGKGTRPTVIT 333


HSP 2 Score: 48.5 bits (114), Expect = 7.0e-03
Identity = 30/100 (30.00%), Postives = 47/100 (47.00%), Query Frame = 1 

Query: 18  DGLCKDG-----------QESQGMIPNVMVLPKS-HE----GQVDNANILFQRWKKNGCT 77
           DGLCK G            + +G +P+V+V     HE     + + A  L       G  
Sbjct: 164 DGLCKAGLVDKAKELFIEMKDRGFVPDVIVYSALIHELYYNEKWEAAKALLNEMVDQGVR 223

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           PN++T+N+L+  LC+   L E  +LL  M+ + + PD  T
Sbjct: 224 PNVVTFNVLIGVLCRRGHLKESSDLLKLMIQRGIDPDVFT 263


HSP 3 Score: 45.4 bits (106), Expect = 5.9e-02
Identity = 21/69 (30.43%), Postives = 37/69 (53.62%), Query Frame = 1 

Query: 33  NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVH 92
           NV++      G +  ++ L +   + G  P++ TYN L+ G C + +L+E  EL H +  
Sbjct: 230 NVLIGVLCRRGHLKESSDLLKLMIQRGIDPDVFTYNTLMDGFCLAGRLNEARELFHSIPS 289

Query: 93  KDVSPDAIT 102
           +   PDAI+
Sbjct: 290 RGCEPDAIS 298


HSP 4 Score: 40.4 bits (93), Expect = 1.9e+00
Identity = 26/101 (25.74%), Postives = 50/101 (49.50%), Query Frame = 1 

Query: 4   CIISNLPYFISFHKDGLCKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPN 63
           C   N+   ++ +K+ + K G     +  N ++    H G+V +A  LF   +     PN
Sbjct: 307 CKNRNIQEAVNLYKEMIGK-GTRPTVITYNSLLTGLFHMGKVQDAQELFGEMQTQNLLPN 366

Query: 64  IITYNILLRGLCQSNKLDEVVELLHRMVHKD--VSPDAITC 103
             TY ILL GLC+++ + E +E+   + + +  +S + + C
Sbjct: 367 STTYKILLDGLCKTDCVPEAMEVFRTLENCNFKISVEMLNC 406


HSP 5 Score: 36.6 bits (83), Expect = 2.7e+01
Identity = 23/83 (27.71%), Postives = 41/83 (49.40%), Query Frame = 1 

Query: 18  DGLCKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQS 77
           +GLC+ G        N  V  + HE ++ N N ++       C P++++Y  ++ GLC++
Sbjct: 123 NGLCRTG--------NTNVALRLHE-EMANGNGVYGV----ECKPSVVSYGTIIDGLCKA 182

Query: 78  NKLDEVVELLHRMVHKDVSPDAI 101
             +D+  EL   M  +   PD I
Sbjct: 183 GLVDKAKELFIEMKDRGFVPDVI 192


HSP 6 Score: 93.2 bits (230), Expect = 2.5e-16
Identity = 51/123 (41.46%), Postives = 71/123 (57.72%), Query Frame = 1 

Query: 18  DGLCKDGQES-----------QGMIPNVMVLP-----KSHEGQVDNANILFQRWKKNGCT 77
           +GLCK G+             +G +PNV+           EGQ++ AN LF   +  GC+
Sbjct: 409 NGLCKSGKFEIAWELFQRLLQRGPVPNVITYSIIINGLCKEGQLEKANCLFLEMEGQGCS 468

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT-------CTKAKKYKECLDL 118
           PN +TYN L+R  C +N+L +VVELLH+M  ++V PDA T        +K KKY+ECLDL
Sbjct: 469 PNYVTYNTLMRSFCDNNELPKVVELLHQMAKRNVQPDASTFSIVIDLVSKDKKYRECLDL 528

[Close]
BLAST of ClCG01G008110 vs. TrEMBL
Match: W9S0N2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_005753 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-03
Identity = 39/158 (24.68%), Postives = 63/158 (39.87%), Query Frame = 1 

Query: 18  DGLCKDGQESQGM----------------IPNVMVLPKSHEGQVDNANILFQRWKKNGCT 77
           DGLCK+ +  + +                + N ++      G+ + A  LFQR  + G  
Sbjct: 374 DGLCKNNRVEEALEIFRTLKDSNFEMTIQVMNTIINGLCKSGKFEIAWELFQRLLQRGPV 433

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT-------------------- 118
           PN+ITY+I++ GLC+  +L++   L   M  +  SP+ +T                    
Sbjct: 434 PNVITYSIIINGLCKEGQLEKANCLFLEMEGQGCSPNYVTYNTLMRSFCDNNELPKVVEL 493


HSP 2 Score: 50.4 bits (119), Expect = 1.8e-03
Identity = 21/58 (36.21%), Postives = 37/58 (63.79%), Query Frame = 1 

Query: 33  NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRM 91
           N ++    H G+VD+A  +F   + +G  PN  TY+ILL GLC++N+++E +E+   +
Sbjct: 335 NTLLCGLFHAGKVDDARKMFDEMQDHGMVPNSSTYSILLDGLCKNNRVEEALEIFRTL 392


HSP 3 Score: 50.4 bits (119), Expect = 1.8e-03
Identity = 32/130 (24.62%), Postives = 58/130 (44.62%), Query Frame = 1 

Query: 3   ICIISNLPYFISFHKDGLCKDGQESQGMIPNVM-----VLPKSHEGQVDNANILFQRWKK 62
           +C   N    +  H++    +G+      PN++     +     EG V+ A  +F   K 
Sbjct: 125 LCRTGNTNIALKLHEEMSSGNGRHGLDCKPNLVSYGAIIDGLCKEGMVEKAKEIFLEMKA 184

Query: 63  NGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT-------CTKAKKYKE 121
            G  P+++ Y+ L+ GLC  +K DE   L   M+   V P+ +T        +K  K K+
Sbjct: 185 AGIAPDVVVYSSLIHGLCFDDKWDEAKSLFVEMMDHGVRPNTVTFNVWIDALSKKGKRKQ 244


HSP 4 Score: 46.2 bits (108), Expect = 3.5e-02
Identity = 20/59 (33.90%), Postives = 33/59 (55.93%), Query Frame = 1 

Query: 43  GQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           G+++ A  LF      GC PN  +YN+L+R      K++E +++   M+ K VSP  +T
Sbjct: 275 GKLEKAKELFYSLPAKGCEPNSYSYNMLIRVHIMKRKIEETLKIFREMIPKGVSPTVVT 333


HSP 5 Score: 40.0 bits (92), Expect = 2.5e+00
Identity = 19/67 (28.36%), Postives = 36/67 (53.73%), Query Frame = 1 

Query: 33  NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVH 92
           NV +   S +G+   A  + +   + G + ++ TYN LL G C++ KL++  EL + +  
Sbjct: 230 NVWIDALSKKGKRKQARDMLEMMVERGVSADLFTYNALLDGFCRAGKLEKAKELFYSLPA 289

Query: 93  KDVSPDA 100
           K   P++
Sbjct: 290 KGCEPNS 296


HSP 6 Score: 39.3 bits (90), Expect = 4.2e+00
Identity = 21/80 (26.25%), Postives = 38/80 (47.50%), Query Frame = 1 

Query: 27  SQGMIPNVMVLPK-----SHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLD 86
           S G++PN + L        +  +V +A ++     + G +PNI++Y  L++GL    K+ 
Sbjct: 38  SSGLLPNFITLSILINCFCNTNRVSDAFVVVGSMLRRGFSPNIVSYTSLIKGLFMEEKIF 97

Query: 87  EVVELLHRMVHKDVSPDAIT 102
           E + L   M      P  +T
Sbjct: 98  EAIRLYKNMFKLGCKPTVVT 117


HSP 7 Score: 38.9 bits (89), Expect = 5.5e+00
Identity = 24/108 (22.22%), Postives = 51/108 (47.22%), Query Frame = 1 

Query: 21  CKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKL 80
           C+    S  M+  V ++ +    +++    +F+     G +P ++TYN LL GL  + K+
Sbjct: 292 CEPNSYSYNMLIRVHIMKR----KIEETLKIFREMIPKGVSPTVVTYNTLLCGLFHAGKV 351

Query: 81  DEVVELLHRMVHKDVSPDAITCT-------KAKKYKECLDLLPSLMKS 122
           D+  ++   M    + P++ T +       K  + +E L++  +L  S
Sbjct: 352 DDARKMFDEMQDHGMVPNSSTYSILLDGLCKNNRVEEALEIFRTLKDS 395


HSP 8 Score: 38.1 bits (87), Expect = 9.4e+00
Identity = 16/57 (28.07%), Postives = 31/57 (54.39%), Query Frame = 1 

Query: 51  LFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAITCTKAKK 108
           L+ R   +G  PN IT +IL+   C +N++ +   ++  M+ +  SP+ ++ T   K
Sbjct: 32  LYNRMNSSGLLPNFITLSILINCFCNTNRVSDAFVVVGSMLRRGFSPNIVSYTSLIK 88


HSP 9 Score: 34.3 bits (77), Expect = 1.4e+02
Identity = 18/68 (26.47%), Postives = 34/68 (50.00%), Query Frame = 1 

Query: 28  QGMIPNVMVLPKSHEG-----QVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDE 87
           +G  PN++      +G     ++  A  L++   K GC P ++TY  L+ GLC++   + 
Sbjct: 74  RGFSPNIVSYTSLIKGLFMEEKIFEAIRLYKNMFKLGCKPTVVTYGTLIDGLCRTGNTNI 133

Query: 88  VVELLHRM 91
            ++L   M
Sbjct: 134 ALKLHEEM 141


HSP 10 Score: 88.2 bits (217), Expect = 7.9e-15
Identity = 53/121 (43.80%), Postives = 72/121 (59.50%), Query Frame = 1 

Query: 18  DGLCK-----------DGQESQGMIPNV-----MVLPKSHEGQVDNANILFQRWKKNGCT 77
           DGLCK           +    +G+ P+V     M+      GQVDNANILFQ  ++NGCT
Sbjct: 455 DGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCT 514

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAITCT-------KAKKYKECLDL 116
           PN++TY+ LL G  ++NKL+EVV+LLH+M+ KDVS  A   T       K +K +E LD+
Sbjct: 515 PNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDI 574

[Close]
BLAST of ClCG01G008110 vs. TrEMBL
Match: A0A0A0K7C1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G230920 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-03
Identity = 27/80 (33.75%), Postives = 46/80 (57.50%), Query Frame = 1 

Query: 28  QGMIPNVMVLPKSHEG-----QVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDE 87
           +G IP+V+      +G     ++  A  LF R +K GC PN++TY  L++GLC++  ++ 
Sbjct: 155 RGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINL 214

Query: 88  VVELLHRMVHKDVSPDAITC 103
            ++ LH+ +    SP AI C
Sbjct: 215 ALK-LHQEMLNGTSPYAINC 233


HSP 2 Score: 43.1 bits (100), Expect = 2.9e-01
Identity = 26/100 (26.00%), Postives = 47/100 (47.00%), Query Frame = 1 

Query: 18  DGLCKDGQESQ-----------GMIPNVMVLPKSHEG-----QVDNANILFQRWKKNGCT 77
           D LCK+G   +           G++P++       EG      +D+A  LF      G  
Sbjct: 280 DTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYE 339

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           P++I+Y +L+ G C++  ++E ++L + M+     PD  T
Sbjct: 340 PDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKT 379


HSP 3 Score: 42.4 bits (98), Expect = 5.0e-01
Identity = 25/83 (30.12%), Postives = 39/83 (46.99%), Query Frame = 1 

Query: 19  GLCKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSN 78
           GLC+ G        N+ +  K H+  ++  +          C PNI +YNI++  LC+  
Sbjct: 205 GLCRTG--------NINLALKLHQEMLNGTSPY-----AINCKPNIFSYNIIIDELCKIG 264

Query: 79  KLDEVVELLHRMVHKDVSPDAIT 102
           K  E   L + MV + V PD +T
Sbjct: 265 KWKEAKRLFNEMVDQGVRPDVVT 274


HSP 4 Score: 42.4 bits (98), Expect = 5.0e-01
Identity = 34/140 (24.29%), Postives = 61/140 (43.57%), Query Frame = 1 

Query: 11  YFISFHKDGLCKDGQESQGMIP----------------NVMVLPKSHEGQVDNANILFQR 70
           Y  S   DGLCK+G   + M                  N ++       +++ A  LF++
Sbjct: 413 YICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEK 472

Query: 71  WKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAITCT-------KAKK 127
             + G  P+++TY I++ G C++ ++D    L   M     +P+ +T +       K  K
Sbjct: 473 LSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNK 532


HSP 5 Score: 36.6 bits (83), Expect = 2.7e+01
Identity = 17/57 (29.82%), Postives = 30/57 (52.63%), Query Frame = 1 

Query: 51  LFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAITCTKAKK 108
           L+++    G +PN  T NIL+  LC  N++ E +  +  ++ +   PD +T T   K
Sbjct: 113 LYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIK 169


HSP 6 Score: 83.2 bits (204), Expect = 2.5e-13
Identity = 48/123 (39.02%), Postives = 69/123 (56.10%), Query Frame = 1 

Query: 18  DGLCKDGQ-----------ESQGMIPNV-----MVLPKSHEGQVDNANILFQRWKKNGCT 77
           DGLCK  +             +G+ PNV     M+      GQ++NA  LF   ++ GC 
Sbjct: 491 DGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCA 550

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT-------CTKAKKYKECLDL 118
           PN++T+N L+RG CQ++++ +VVELL  M  KD SPDA T        +K +KY+E L L
Sbjct: 551 PNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHL 610

[Close]
BLAST of ClCG01G008110 vs. TrEMBL
Match: D7SQM4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0141g00780 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.5e-05
Identity = 31/100 (31.00%), Postives = 49/100 (49.00%), Query Frame = 1 

Query: 18  DGLCKDG-----------QESQGMIPNVMVLPK-----SHEGQVDNANILFQRWKKNGCT 77
           D LCKDG            + +G+ P+V+          H G+ + A  LF      G  
Sbjct: 246 DSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVH 305

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           PN++T+N+L+  LC++ K++E   LL  M+ +  SPD  T
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFT 345


HSP 2 Score: 52.0 bits (123), Expect = 6.3e-04
Identity = 27/65 (41.54%), Postives = 37/65 (56.92%), Query Frame = 1 

Query: 33  NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVH 92
           N ++     EG+V +A  LF   K +  TP   TYNILL GLC++N L E +EL H + +
Sbjct: 417 NTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLEN 476

Query: 93  KDVSP 98
            D  P
Sbjct: 477 HDFQP 481


HSP 3 Score: 51.2 bits (121), Expect = 1.1e-03
Identity = 29/100 (29.00%), Postives = 49/100 (49.00%), Query Frame = 1 

Query: 18  DGLCKDGQESQGMI-----------PNVMVLPKSHEG-----QVDNANILFQRWKKNGCT 77
           DGLCK+   S+ M            P++ +     +G     +++ A  LF R    G  
Sbjct: 456 DGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLE 515

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           PN+ITY +++ GLC+S +L+   +L   M  K  +P+ +T
Sbjct: 516 PNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVT 555


HSP 4 Score: 40.4 bits (93), Expect = 1.9e+00
Identity = 18/69 (26.09%), Postives = 36/69 (52.17%), Query Frame = 1 

Query: 33  NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVH 92
           N+++    +  +VD    +     + G +PN +T+  L++GLC  +++ E   LL +MV 
Sbjct: 131 NILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVR 190

Query: 93  KDVSPDAIT 102
               P+ +T
Sbjct: 191 MGYRPNVVT 199


HSP 5 Score: 39.7 bits (91), Expect = 3.2e+00
Identity = 20/57 (35.09%), Postives = 31/57 (54.39%), Query Frame = 1 

Query: 51  LFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAITCTKAKK 108
           L++R    G  P+ IT NIL+   C  NK+D  + +L  M+ +  SP+ +T T   K
Sbjct: 114 LYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVK 170


HSP 6 Score: 34.3 bits (77), Expect = 1.4e+02
Identity = 19/70 (27.14%), Postives = 33/70 (47.14%), Query Frame = 1 

Query: 28  QGMIPNVMVLPKSHEG-----QVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDE 87
           +G  PN +      +G     ++  A  L ++  + G  PN++TY  LL GLC +     
Sbjct: 156 RGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTML 215

Query: 88  VVELLHRMVH 93
            V+L   M++
Sbjct: 216 AVKLHEEMLN 225


HSP 7 Score: 80.1 bits (196), Expect = 2.2e-12
Identity = 41/110 (37.27%), Postives = 66/110 (60.00%), Query Frame = 1 

Query: 15  FHKDGLCKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGL 74
           FH+  L KDG     +  ++M+     +GQ + AN LF + + NGC PN+IT+N L+ G 
Sbjct: 515 FHR--LQKDGLAPTVVTYSIMIRGLCQQGQFEEANELFMKMEANGCPPNVITFNTLMHGF 574

Query: 75  CQSNKLDEVVELLHRMVHKDVSPDAIT-------CTKAKKYKECLDLLPS 118
           CQ+N++ +V+ELL +M  + + PD  T        +K + +KE L+LLP+
Sbjct: 575 CQNNEIVKVIELLKKMAERSILPDDFTTSMVVDVLSKDENHKEYLNLLPT 622

[Close]
BLAST of ClCG01G008110 vs. TAIR10
Match: AT1G12700.1 (AT1G12700.1 ATP binding;nucleic acid binding;helicases)

HSP 1 Score: 61.2 bits (147), Expect = 5.2e-10
Identity = 37/105 (35.24%), Postives = 50/105 (47.62%), Query Frame = 1 

Query: 19  GLCKDGQESQG-----------MIPNVMVLPKS-----HEGQVDNANILFQRWKKNGCTP 78
           GLCK G+ + G           ++PNV+           EG++  AN L++     G +P
Sbjct: 272 GLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331

Query: 79  NIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAITCTKAKK 108
           NIITYN L+ G C  N+L E   +L  MV    SPD +T T   K
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376


HSP 2 Score: 55.5 bits (132), Expect = 2.9e-08
Identity = 31/109 (28.44%), Postives = 51/109 (46.79%), Query Frame = 1 

Query: 22  KDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLD 81
           K G E      N ++     EG+V  A +L  R  +NGC P+++TYN ++ G+C+S    
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210

Query: 82  EVVELLHRMVHKDVSPDAITCT---KAKKYKECLDLLPSLMKSYSLRAM 128
             ++LL +M  ++V  D  T +    +     C+D   SL K    + +
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259


HSP 3 Score: 49.3 bits (116), Expect = 2.1e-06
Identity = 29/86 (33.72%), Postives = 41/86 (47.67%), Query Frame = 1 

Query: 44  QVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT-- 103
           +VD+   +F+   K G   N +TY+IL++G CQS K+    EL   MV   V PD +T  
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYG 442

Query: 104 ------CTKAKKYKECLDLLPSLMKS 122
                 C    K ++ L++   L KS
Sbjct: 443 ILLDGLCDNG-KLEKALEIFEDLQKS 467


HSP 4 Score: 48.1 bits (113), Expect = 4.6e-06
Identity = 22/60 (36.67%), Postives = 36/60 (60.00%), Query Frame = 1 

Query: 42  EGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 101
           +G +D A  LF+  +  G   +++TYN L+RGLC++ K ++   LL  MV +++ P+ IT
Sbjct: 241 DGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT 300


HSP 5 Score: 47.8 bits (112), Expect = 6.0e-06
Identity = 36/124 (29.03%), Postives = 54/124 (43.55%), Query Frame = 1 

Query: 18  DGLCKDGQES-----------QGMIPNVM-----VLPKSHEGQVDNANILFQRWKKNGCT 77
           +G+CK G+             +G+ PNVM     +     +G +  ANIL ++ +++G  
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNA 540

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAITCTKAKKYKECLDLLPSLMKS 126
           PN  TYN L+R   +   L    +L+  M     S D      A   K  +D+L S MK 
Sbjct: 541 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSAD------ASSIKMVIDMLLSAMKR 598


HSP 6 Score: 44.7 bits (104), Expect = 5.1e-05
Identity = 21/67 (31.34%), Postives = 36/67 (53.73%), Query Frame = 1 

Query: 20  LCKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNK 79
           + K G  +  +  +++V      G++  A  LFQ    +G  P+++TY ILL GLC + K
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGK 453

Query: 80  LDEVVEL 87
           L++ +E+
Sbjct: 454 LEKALEI 460


HSP 7 Score: 42.4 bits (98), Expect = 2.5e-04
Identity = 28/100 (28.00%), Postives = 45/100 (45.00%), Query Frame = 1 

Query: 18  DGLCKDG-----------QESQGMIPNV-----MVLPKSHEGQVDNANILFQRWKKNGCT 77
           D LC+DG            E++G+  +V     +V      G+ ++  +L +        
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           PN+IT+N+LL    +  KL E  EL   M+ + +SP+ IT
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335

[Close]
BLAST of ClCG01G008110 vs. TAIR10
Match: AT5G46100.1 (AT5G46100.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 59.7 bits (143), Expect = 1.5e-09
Identity = 32/82 (39.02%), Postives = 39/82 (47.56%), Query Frame = 1 

Query: 18  DGLCKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQS 77
           DGLCKDG+  Q M                    LF+     GC PN++TY  L+ GLC+ 
Sbjct: 270 DGLCKDGRSLQAME-------------------LFEMMMARGCRPNMVTYTTLITGLCKE 329

Query: 78  NKLDEVVELLHRMVHKDVSPDA 100
            K+ E VELL RM  + + PDA
Sbjct: 330 QKIQEAVELLDRMNLQGLKPDA 332


HSP 2 Score: 52.8 bits (125), Expect = 1.9e-07
Identity = 24/63 (38.10%), Postives = 33/63 (52.38%), Query Frame = 1 

Query: 41  HEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAI 100
           ++G VD    +F    K GC P+  TY  L+ GLC+  ++DE  +L   MV KD +P  +
Sbjct: 169 NDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVV 228

Query: 101 TCT 104
           T T
Sbjct: 229 TYT 231


HSP 3 Score: 50.8 bits (120), Expect = 7.1e-07
Identity = 21/59 (35.59%), Postives = 30/59 (50.85%), Query Frame = 1 

Query: 43  GQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           G++D A  LF    +  C P ++TY  L+ GLC S  +DE +  L  M  K + P+  T
Sbjct: 206 GRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFT 264


HSP 4 Score: 45.1 bits (105), Expect = 3.9e-05
Identity = 24/78 (30.77%), Postives = 38/78 (48.72%), Query Frame = 1 

Query: 45  VDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAITCT- 104
           VD A    +  K  G  PN+ TY+ L+ GLC+  +  + +EL   M+ +   P+ +T T 
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302

Query: 105 ------KAKKYKECLDLL 116
                 K +K +E ++LL
Sbjct: 303 LITGLCKEQKIQEAVELL 320

[Close]
BLAST of ClCG01G008110 vs. TAIR10
Match: AT1G09900.1 (AT1G09900.1 Pentatricopeptide repeat (PPR-like) superfamily protein)

HSP 1 Score: 58.9 bits (141), Expect = 2.6e-09
Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 1 

Query: 26  ESQGMIP-----NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKL 85
           E  G +P     NVM+      G+++NA  +  R      +P+++TYN +LR LC S KL
Sbjct: 164 EGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKL 223

Query: 86  DEVVELLHRMVHKDVSPDAITCT 104
            + +E+L RM+ +D  PD IT T
Sbjct: 224 KQAMEVLDRMLQRDCYPDVITYT 243


HSP 2 Score: 53.9 bits (128), Expect = 8.4e-08
Identity = 21/68 (30.88%), Postives = 37/68 (54.41%), Query Frame = 1 

Query: 34  VMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHK 93
           +++     +  V +A  L    +  GCTP+++TYN+L+ G+C+  +LDE ++ L+ M   
Sbjct: 244 ILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS 303

Query: 94  DVSPDAIT 102
              P+ IT
Sbjct: 304 GCQPNVIT 311


HSP 3 Score: 53.1 bits (126), Expect = 1.4e-07
Identity = 24/69 (34.78%), Postives = 39/69 (56.52%), Query Frame = 1 

Query: 33  NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVH 92
           N M+     +G+V++A  +  +    GC+P +ITYN ++ GL ++ K  + ++LL  M  
Sbjct: 418 NTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477

Query: 93  KDVSPDAIT 102
           KD+ PD IT
Sbjct: 478 KDLKPDTIT 486


HSP 4 Score: 52.4 bits (124), Expect = 2.4e-07
Identity = 25/69 (36.23%), Postives = 37/69 (53.62%), Query Frame = 1 

Query: 33  NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVH 92
           NV+V     EG++D A         +GC PN+IT+NI+LR +C + +  +  +LL  M+ 
Sbjct: 278 NVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR 337

Query: 93  KDVSPDAIT 102
           K  SP  +T
Sbjct: 338 KGFSPSVVT 346


HSP 5 Score: 51.2 bits (121), Expect = 5.4e-07
Identity = 23/60 (38.33%), Postives = 35/60 (58.33%), Query Frame = 1 

Query: 42  EGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 101
           E ++D A    +R    GC P+I+TYN +L  LC+  K+++ VE+L+++  K  SP  IT
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451


HSP 6 Score: 50.4 bits (119), Expect = 9.3e-07
Identity = 28/86 (32.56%), Postives = 45/86 (52.33%), Query Frame = 1 

Query: 40  SHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDA 99
           S EG+VD A   F  +++ G  PN +T+N ++ GLC+S + D  ++ L  M+++   P+ 
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554

Query: 100 ITCT---KAKKY----KECLDLLPSL 119
            + T   +   Y    KE L+LL  L
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNEL 580


HSP 7 Score: 41.2 bits (95), Expect = 5.6e-04
Identity = 25/100 (25.00%), Postives = 50/100 (50.00%), Query Frame = 1 

Query: 18  DGLCKDGQ-----------ESQGMIPNVM---VLPKS--HEGQVDNANILFQRWKKNGCT 77
           +G+CK+G+            S G  PNV+   ++ +S    G+  +A  L     + G +
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           P+++T+NIL+  LC+   L   +++L +M      P++++
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381


HSP 8 Score: 40.8 bits (94), Expect = 7.3e-04
Identity = 18/69 (26.09%), Postives = 34/69 (49.28%), Query Frame = 1 

Query: 33  NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVH 92
           N ++      G++  A  +  R  +  C P++ITY IL+   C+ + +   ++LL  M  
Sbjct: 208 NTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRD 267

Query: 93  KDVSPDAIT 102
           +  +PD +T
Sbjct: 268 RGCTPDVVT 276


HSP 9 Score: 34.3 bits (77), Expect = 6.9e-02
Identity = 22/73 (30.14%), Postives = 29/73 (39.73%), Query Frame = 1 

Query: 26  ESQGMIPNVMVLPKSHEG-----QVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKL 85
           E  G+ PN +       G     Q D A          GC PN  +Y IL+ GL      
Sbjct: 511 ERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMA 570

Query: 86  DEVVELLHRMVHK 94
            E +ELL+ + +K
Sbjct: 571 KEALELLNELCNK 583

[Close]
BLAST of ClCG01G008110 vs. TAIR10
Match: AT4G20090.1 (AT4G20090.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 4.4e-09
Identity = 35/100 (35.00%), Postives = 45/100 (45.00%), Query Frame = 1 

Query: 18  DGLCK-----------DGQESQGMIP-----NVMVLPKSHEGQVDNANILFQRWKKNGCT 77
           DGLCK           D  +S+G  P     NV++     +G +     L       GC 
Sbjct: 230 DGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCV 289

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           PN +TYN L+ GLC   KLD+ V LL RMV     P+ +T
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329


HSP 2 Score: 56.2 bits (134), Expect = 1.7e-08
Identity = 26/77 (33.77%), Postives = 45/77 (58.44%), Query Frame = 1 

Query: 31  IPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRM 90
           I +V++     EG+ + A  L+++  + GC PNI+ Y++L+ GLC+  K +E  E+L+RM
Sbjct: 364 IYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM 423

Query: 91  VHKDVSPDAITCTKAKK 108
           +     P+A T +   K
Sbjct: 424 IASGCLPNAYTYSSLMK 440


HSP 3 Score: 48.1 bits (113), Expect = 4.6e-06
Identity = 22/55 (40.00%), Postives = 30/55 (54.55%), Query Frame = 1 

Query: 62  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAITC-----TKAKKYKEC 112
           P+++TYNILL GLC    +   V+LL+ M+ +   PD ITC     T ++K   C
Sbjct: 538 PDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSC 592


HSP 4 Score: 47.8 bits (112), Expect = 6.0e-06
Identity = 27/88 (30.68%), Postives = 42/88 (47.73%), Query Frame = 1 

Query: 42  EGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 101
           E ++D A +L    +  GC+P+ + YN+L+ GLC+   L  V +L+  M  K   P+ +T
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT 294

Query: 102 --------CTKAKKYKECLDLLPSLMKS 122
                   C K K  K  + LL  ++ S
Sbjct: 295 YNTLIHGLCLKGKLDK-AVSLLERMVSS 321


HSP 5 Score: 42.0 bits (97), Expect = 3.3e-04
Identity = 26/89 (29.21%), Postives = 39/89 (43.82%), Query Frame = 1 

Query: 18  DGLCKDGQESQ-----------GMIPN-----VMVLPKSHEGQVDNANILFQRWKKNGCT 77
           DGLCK G  ++           G +PN      ++     +G++D A  L +R   + C 
Sbjct: 265 DGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCI 324

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRM 91
           PN +TY  L+ GL +  +  + V LL  M
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSM 353


HSP 6 Score: 39.7 bits (91), Expect = 1.6e-03
Identity = 20/56 (35.71%), Postives = 28/56 (50.00%), Query Frame = 1 

Query: 45  VDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAI 101
           VD A  +F+   +  C P+  TY  L+ GLC+  ++DE V LL  M  +  SP  +
Sbjct: 203 VDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258


HSP 7 Score: 38.1 bits (87), Expect = 4.8e-03
Identity = 29/126 (23.02%), Postives = 51/126 (40.48%), Query Frame = 1 

Query: 15  FHKDGLC-----------KDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPN 74
           F K GLC           K G        +V++      G+V  A +++ +    G  P+
Sbjct: 442 FFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPD 501

Query: 75  IITYNILLRGLCQSNKLDEVVELLHRMVHKD---VSPDAIT-------CTKAKKYKECLD 120
            + Y+ +++GLC    +D  ++L H M+ ++     PD +T           K     +D
Sbjct: 502 TVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVD 561

[Close]
BLAST of ClCG01G008110 vs. TAIR10
Match: AT1G74580.1 (AT1G74580.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.3e-08
Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 1 

Query: 57  KNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           + GC PN+ T+NILL  LC+  KLDE + LL  M +K V+PDA+T
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVT 568


HSP 2 Score: 51.6 bits (122), Expect = 4.2e-07
Identity = 36/124 (29.03%), Postives = 57/124 (45.97%), Query Frame = 1 

Query: 18  DGLCKDG-----------QESQGMIP-----NVMVLPKSHEGQVDNANILFQRWKKNGCT 77
           +GLCK G             S+G  P     N+++   S + +++NA  +      NG  
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT-------CTKAKKYKECLDL 119
           P++ TYN LL GLC+++K ++V+E    MV K  +P+  T         + +K  E L L
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553


HSP 3 Score: 48.1 bits (113), Expect = 4.6e-06
Identity = 21/60 (35.00%), Postives = 31/60 (51.67%), Query Frame = 1 

Query: 42  EGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 101
           +G V     L  +  K G  PN+ TYN+ ++GLCQ  +LD  V ++  ++ +   PD IT
Sbjct: 229 KGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288


HSP 4 Score: 45.1 bits (105), Expect = 3.9e-05
Identity = 24/79 (30.38%), Postives = 42/79 (53.16%), Query Frame = 1 

Query: 28  QGMIPNVM-----VLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDE 87
           +G++PN+      +      G++D A  +     + G  P++ITYN L+ GLC+++K  E
Sbjct: 245 RGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQE 304

Query: 88  VVELLHRMVHKDVSPDAIT 102
               L +MV++ + PD+ T
Sbjct: 305 AEVYLGKMVNEGLEPDSYT 323


HSP 5 Score: 44.7 bits (104), Expect = 5.1e-05
Identity = 28/100 (28.00%), Postives = 46/100 (46.00%), Query Frame = 1 

Query: 18  DGLCKDGQESQ-----------GMIPNV-----MVLPKSHEGQVDNANILFQRWKKNGCT 77
           DGLC +G+ ++           G+ PNV     ++   S++G +  A  L     + G  
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLI 423

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           P + T+NIL+ GLC+   + +   L+  M+ K   PD  T
Sbjct: 424 PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFT 463


HSP 6 Score: 41.2 bits (95), Expect = 5.6e-04
Identity = 27/105 (25.71%), Postives = 49/105 (46.67%), Query Frame = 1 

Query: 28  QGMIP-----NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDE 87
           +G+IP     N++V      G V +A+ L +     G  P+I T+NIL+ G     K++ 
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479

Query: 88  VVELLHRMVHKDVSPDAIT-------CTKAKKYKECLDLLPSLMK 121
            +E+L  M+   V PD  T         K  K+++ ++   ++++
Sbjct: 480 ALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524


HSP 7 Score: 32.0 bits (71), Expect = 3.4e-01
Identity = 16/51 (31.37%), Postives = 27/51 (52.94%), Query Frame = 1 

Query: 51  LFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           LF +   +G +  + T+N LLR LC+   + E  +LL +++ + V P+  T
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFT 253


HSP 8 Score: 31.2 bits (69), Expect = 5.8e-01
Identity = 14/58 (24.14%), Postives = 26/58 (44.83%), Query Frame = 1 

Query: 33  NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRM 91
           N+++       ++D A  L +  K     P+ +T+  L+ G C++  LD    L  +M
Sbjct: 535 NILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592

[Close]
BLAST of ClCG01G008110 vs. NCBI nr
Match: gi|659100702|ref|XP_008451225.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucumis melo])

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-23
Identity = 64/122 (52.46%), Postives = 78/122 (63.93%), Query Frame = 1 

Query: 18  DGLCKDGQ-----------ESQGMIPNV-----MVLPKSHEGQVDNANILFQRWKKNGCT 77
           DGLCK+G+             +G+ PNV     M+     EGQVD AN+L Q+ + NGC 
Sbjct: 439 DGLCKEGKLETAWELFEKLSQEGLQPNVVTYSIMIHGLCREGQVDKANVLIQKMETNGCN 498

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAITCT-------KAKKYKECLDL 117
           PNIITYN L+RG  +SNKLDEVV+LLH MV KDV PDA TC+       K +KY+ECLDL
Sbjct: 499 PNIITYNTLMRGFYESNKLDEVVQLLHGMVKKDVLPDATTCSIVVDMLCKDEKYQECLDL 558

[Close]
BLAST of ClCG01G008110 vs. NCBI nr
Match: gi|659100702|ref|XP_008451225.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like [Cucumis melo])

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-04
Identity = 32/104 (30.77%), Postives = 49/104 (47.12%), Query Frame = 1 

Query: 3   ICIISNLPYFISFHKDGLCKDGQESQGMIPNV-----MVLPKSHEGQVDNANILFQRWKK 62
           +C   N+   +  H++ L    Q      PNV     ++      G+ D AN LF+  K 
Sbjct: 155 LCQTGNVNIALKLHQEMLNDTSQYGINCKPNVFNYNIIIDGLCKVGREDEANELFEEMKA 214

Query: 63  NGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
            G  PN+I+Y+ L+ G C + K +E   L   MV + V PD +T
Sbjct: 215 QGMIPNVISYSSLIHGFCCARKWEESKRLFDEMVDQGVQPDKVT 258


HSP 2 Score: 54.7 bits (130), Expect = 1.4e-04
Identity = 29/80 (36.25%), Postives = 46/80 (57.50%), Query Frame = 1 

Query: 28  QGMIPNVMVLPKSHEG-----QVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDE 87
           +G IPNV+      +G     ++  A  LF R +K GCTPN++TY  L++GLCQ+  ++ 
Sbjct: 104 RGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNVVTYGTLVKGLCQTGNVNI 163

Query: 88  VVELLHRMVHKDVSPDAITC 103
            ++ LH+ +  D S   I C
Sbjct: 164 ALK-LHQEMLNDTSQYGINC 182


HSP 3 Score: 50.8 bits (120), Expect = 2.0e-03
Identity = 27/100 (27.00%), Postives = 52/100 (52.00%), Query Frame = 1 

Query: 18  DGLCKDGQE-----------SQGMIPNVMVLPKSHEG-----QVDNANILFQRWKKNGCT 77
           D LCK+G+             +G++P++ +     EG      +++A  LF      GC 
Sbjct: 264 DTLCKEGKVIEAKKLFEVMIQRGIVPDLFIYSSLMEGFCMVGDLNSARELFVSMPSKGCE 323

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           P++I+Y +L+ G C++ K++E ++L + M+     P+ IT
Sbjct: 324 PDVISYTVLINGYCKTLKVEEAMKLYNEMLLVGKRPNVIT 363


HSP 4 Score: 41.6 bits (96), Expect = 1.2e+00
Identity = 28/109 (25.69%), Postives = 47/109 (43.12%), Query Frame = 1 

Query: 18  DGLCKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQS 77
           D +   G +   +  +V++     EG+V  A  LF+   + G  P++  Y+ L+ G C  
Sbjct: 245 DEMVDQGVQPDKVTFSVLIDTLCKEGKVIEAKKLFEVMIQRGIVPDLFIYSSLMEGFCMV 304

Query: 78  NKLDEVVELLHRMVHKDVSPDAITCT-------KAKKYKECLDLLPSLM 120
             L+   EL   M  K   PD I+ T       K  K +E + L   ++
Sbjct: 305 GDLNSARELFVSMPSKGCEPDVISYTVLINGYCKTLKVEEAMKLYNEML 353


HSP 5 Score: 41.6 bits (96), Expect = 1.2e+00
Identity = 29/108 (26.85%), Postives = 53/108 (49.07%), Query Frame = 1 

Query: 19  GLCKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSN 78
           GLC+ G        NV +  K H+  +++ +    ++  N C PN+  YNI++ GLC+  
Sbjct: 154 GLCQTG--------NVNIALKLHQEMLNDTS----QYGIN-CKPNVFNYNIIIDGLCKVG 213

Query: 79  KLDEVVELLHRMVHKDVSPDAITCTK-------AKKYKECLDLLPSLM 120
           + DE  EL   M  + + P+ I+ +        A+K++E   L   ++
Sbjct: 214 REDEANELFEEMKAQGMIPNVISYSSLIHGFCCARKWEESKRLFDEMV 248


HSP 6 Score: 31.6 bits (70), Expect = 1.3e+03
Identity = 17/56 (30.36%), Postives = 29/56 (51.79%), Query Frame = 1 

Query: 44  QVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDA 100
           +V+ A  L+      G  PN+ITY  LL GL  + K+ +  +L   M  + +S ++
Sbjct: 341 KVEEAMKLYNEMLLVGKRPNVITYGALLTGLFLAGKVGDAKKLFSAMKARGISANS 396


HSP 7 Score: 116.3 bits (290), Expect = 3.9e-23
Identity = 64/122 (52.46%), Postives = 79/122 (64.75%), Query Frame = 1 

Query: 18  DGLCKDGQ-----------ESQGMIPNV-----MVLPKSHEGQVDNANILFQRWKKNGCT 77
           DGLCK G+            ++G  PNV     M+     EGQVD AN+L Q+ + NGCT
Sbjct: 337 DGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCT 396

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAITC-------TKAKKYKECLDL 117
           P+IITYN L+RG  +SNKL+EVV+LLHRM  KDVSPDAITC       +K +KY+ECL L
Sbjct: 397 PDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHL 456

[Close]
BLAST of ClCG01G008110 vs. NCBI nr
Match: gi|778727380|ref|XP_011659251.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like isoform X2 [Cucumis sativus])

HSP 1 Score: 51.2 bits (121), Expect = 1.5e-03
Identity = 29/84 (34.52%), Postives = 40/84 (47.62%), Query Frame = 1 

Query: 18  DGLCKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQS 77
           DGLCK G+E                   D A  LF+  K  G  P+II+YN L+ G C +
Sbjct: 92  DGLCKVGRE-------------------DEAKQLFEEMKTQGMIPSIISYNSLIHGFCCA 151

Query: 78  NKLDEVVELLHRMVHKDVSPDAIT 102
            K +E   LL  M+ + + PD +T
Sbjct: 152 GKWEESKRLLDEMLDQGLQPDMVT 156


HSP 2 Score: 49.3 bits (116), Expect = 5.9e-03
Identity = 29/100 (29.00%), Postives = 50/100 (50.00%), Query Frame = 1 

Query: 18  DGLCKDGQE-----------SQGMIPNV-----MVLPKSHEGQVDNANILFQRWKKNGCT 77
           DGLCK G+E           +QGMIP++     ++      G+ + +  L       G  
Sbjct: 92  DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 151

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           P+++T+N+L+  LC+  K+ E  +LL  M+   + PD +T
Sbjct: 152 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVT 191


HSP 3 Score: 47.4 bits (111), Expect = 2.2e-02
Identity = 27/100 (27.00%), Postives = 52/100 (52.00%), Query Frame = 1 

Query: 18  DGLCKDGQESQ-----------GMIPNVMVLPKSHEG-----QVDNANILFQRWKKNGCT 77
           D LCK+G+  +           G++P+++      EG      +++A  LF      GC 
Sbjct: 162 DTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCE 221

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           P++I+YN+L+ G  ++ K++E ++L + M+     P+ IT
Sbjct: 222 PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 261


HSP 4 Score: 43.5 bits (101), Expect = 3.2e-01
Identity = 27/84 (32.14%), Postives = 39/84 (46.43%), Query Frame = 1 

Query: 23  DGQESQGMIP-----NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQS 82
           D    QG+ P     NV++     EG+V  A  L     ++G  P+++TYN L+ G C  
Sbjct: 143 DEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMV 202

Query: 83  NKLDEVVELLHRMVHKDVSPDAIT 102
             L+   EL   M  K   PD I+
Sbjct: 203 GDLNSARELFVSMPSKGCEPDVIS 226


HSP 5 Score: 35.4 bits (80), Expect = 8.7e+01
Identity = 20/69 (28.99%), Postives = 37/69 (53.62%), Query Frame = 1 

Query: 33  NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVH 92
           NV++   S   +V+ A  L+      G  PN+ITY+ LL+G+  + K+D+  +L   M  
Sbjct: 228 NVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKA 287

Query: 93  KDVSPDAIT 102
             ++ ++ T
Sbjct: 288 HGIAENSYT 296


HSP 6 Score: 116.3 bits (290), Expect = 3.9e-23
Identity = 57/107 (53.27%), Postives = 77/107 (71.96%), Query Frame = 1 

Query: 20  LCKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNK 79
           L ++G +S  +  N+M+      GQVD ANILF++ ++NGCTP+IITYN LL G CQSNK
Sbjct: 257 LYQEGLQSDVVTYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNK 316

Query: 80  LDEVVELLHRMVHKDVSPDAITCT-------KAKKYKECLDLLPSLM 120
            DEVV+LLH+M+ +D+SPDAI+C        K +KY+ECLDLLP  +
Sbjct: 317 SDEVVKLLHKMIQRDMSPDAISCNIVIDMLRKDEKYQECLDLLPRFL 363

[Close]
BLAST of ClCG01G008110 vs. NCBI nr
Match: gi|700189560|gb|KGN44793.1| (hypothetical protein Csa_7G387770 [Cucumis sativus])

HSP 1 Score: 71.2 bits (173), Expect = 1.4e-09
Identity = 48/160 (30.00%), Postives = 72/160 (45.00%), Query Frame = 1 

Query: 18  DGLCKDGQESQGMIP----------------NVMVLPKSHEGQVDNANILFQRWKKNGCT 77
           DGLCK+G   + M                  N ++      G+++ A  LF++  + G  
Sbjct: 204 DGLCKNGCLYEAMEHFNQLKSYNIKLDIESYNCLIDGLCKAGKLETAWELFEKLYQEGLQ 263

Query: 78  PNIITYNILLRGLC-----------------------------------QSNKLDEVVEL 120
            +++TYNI++ G C                                   QSNK DEVV+L
Sbjct: 264 SDVVTYNIMIHGFCKVGQVDKANILFEKMEENGCTPDIITYNTLLCGFCQSNKSDEVVKL 323


HSP 2 Score: 35.0 bits (79), Expect = 1.1e+02
Identity = 15/51 (29.41%), Postives = 29/51 (56.86%), Query Frame = 1 

Query: 51  LFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           L+ + +  G +P++ T +IL   LC  N+++E + L + M+     P+A T
Sbjct: 113 LYNKMRLAGLSPDLFTLSILANCLCNVNRVEEAMNLYNEMLQVGKRPNATT 163


HSP 3 Score: 114.0 bits (284), Expect = 1.9e-22
Identity = 57/104 (54.81%), Postives = 72/104 (69.23%), Query Frame = 1 

Query: 20  LCKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNK 79
           L  +G E   +   +M+     EGQVD AN+L Q+ + NGCTP+IITYN L+RG  +SNK
Sbjct: 462 LSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNK 521

Query: 80  LDEVVELLHRMVHKDVSPDAITC-------TKAKKYKECLDLLP 117
           L+EVV+LLHRM  KDVSPDAITC       +K +KY+ECL LLP
Sbjct: 522 LEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLP 565

[Close]
BLAST of ClCG01G008110 vs. NCBI nr
Match: gi|778727377|ref|XP_011659250.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-like isoform X1 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 6.7e-07
Identity = 37/116 (31.90%), Postives = 54/116 (46.55%), Query Frame = 1 

Query: 43  GQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVV------------------ 102
           G+++ A  LF++    G  PN++TY I++ G C+  ++D+                    
Sbjct: 450 GKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITY 509

Query: 103 -----------------ELLHRMVHKDVSPDAITC-------TKAKKYKECLDLLP 117
                            +LLHRM  KDVSPDAITC       +K +KY+ECL LLP
Sbjct: 510 NTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLP 565


HSP 2 Score: 51.2 bits (121), Expect = 1.5e-03
Identity = 29/84 (34.52%), Postives = 40/84 (47.62%), Query Frame = 1 

Query: 18  DGLCKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQS 77
           DGLCK G+E                   D A  LF+  K  G  P+II+YN L+ G C +
Sbjct: 269 DGLCKVGRE-------------------DEAKQLFEEMKTQGMIPSIISYNSLIHGFCCA 328

Query: 78  NKLDEVVELLHRMVHKDVSPDAIT 102
            K +E   LL  M+ + + PD +T
Sbjct: 329 GKWEESKRLLDEMLDQGLQPDMVT 333


HSP 3 Score: 50.4 bits (119), Expect = 2.6e-03
Identity = 26/80 (32.50%), Postives = 46/80 (57.50%), Query Frame = 1 

Query: 28  QGMIPNVMVLPKSHEG-----QVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDE 87
           +G  PN++    S +G     ++  A  LF R +K GCTP+++TY  L++GLC +  ++ 
Sbjct: 179 RGYSPNIVTYNTSIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINI 238

Query: 88  VVELLHRMVHKDVSPDAITC 103
            ++ LH+ +  D+S   I C
Sbjct: 239 ALK-LHQEMLNDISRYEINC 257


HSP 4 Score: 49.3 bits (116), Expect = 5.9e-03
Identity = 29/100 (29.00%), Postives = 50/100 (50.00%), Query Frame = 1 

Query: 18  DGLCKDGQE-----------SQGMIPNV-----MVLPKSHEGQVDNANILFQRWKKNGCT 77
           DGLCK G+E           +QGMIP++     ++      G+ + +  L       G  
Sbjct: 269 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 328

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           P+++T+N+L+  LC+  K+ E  +LL  M+   + PD +T
Sbjct: 329 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVT 368


HSP 5 Score: 47.4 bits (111), Expect = 2.2e-02
Identity = 27/100 (27.00%), Postives = 52/100 (52.00%), Query Frame = 1 

Query: 18  DGLCKDGQESQ-----------GMIPNVMVLPKSHEG-----QVDNANILFQRWKKNGCT 77
           D LCK+G+  +           G++P+++      EG      +++A  LF      GC 
Sbjct: 339 DTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCE 398

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           P++I+YN+L+ G  ++ K++E ++L + M+     P+ IT
Sbjct: 399 PDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVIT 438


HSP 6 Score: 43.9 bits (102), Expect = 2.5e-01
Identity = 31/108 (28.70%), Postives = 53/108 (49.07%), Query Frame = 1 

Query: 19  GLCKDGQESQGMIPNVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSN 78
           GLC  G        N+ +  K H+  +++ +    R++ N C PN+ITYNI++ GLC+  
Sbjct: 229 GLCGTG--------NINIALKLHQEMLNDIS----RYEIN-CKPNVITYNIIVDGLCKVG 288

Query: 79  KLDEVVELLHRMVHKDVSPDAITCTK-------AKKYKECLDLLPSLM 120
           + DE  +L   M  + + P  I+          A K++E   LL  ++
Sbjct: 289 REDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEML 323


HSP 7 Score: 43.5 bits (101), Expect = 3.2e-01
Identity = 27/84 (32.14%), Postives = 39/84 (46.43%), Query Frame = 1 

Query: 23  DGQESQGMIP-----NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQS 82
           D    QG+ P     NV++     EG+V  A  L     ++G  P+++TYN L+ G C  
Sbjct: 320 DEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMV 379

Query: 83  NKLDEVVELLHRMVHKDVSPDAIT 102
             L+   EL   M  K   PD I+
Sbjct: 380 GDLNSARELFVSMPSKGCEPDVIS 403


HSP 8 Score: 40.8 bits (94), Expect = 2.1e+00
Identity = 22/71 (30.99%), Postives = 39/71 (54.93%), Query Frame = 1 

Query: 33  NVMVLPKSHEGQVDNANILFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVH 92
           NV++   S   +V+ A  L+      G  PN+ITY+ LL+G+  + KL+   EL  ++ +
Sbjct: 405 NVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKLETAWELFEKLSN 464

Query: 93  KDVSPDAITCT 104
           +   P+ +T T
Sbjct: 465 EGHEPNVVTYT 475


HSP 9 Score: 30.0 bits (66), Expect = 3.7e+03
Identity = 15/51 (29.41%), Postives = 27/51 (52.94%), Query Frame = 1 

Query: 51  LFQRWKKNGCTPNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAIT 102
           L+ + + +G + +  T NILL  LC  N+L E       ++ +  SP+ +T
Sbjct: 137 LYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVT 187


HSP 10 Score: 113.6 bits (283), Expect = 2.5e-22
Identity = 63/122 (51.64%), Postives = 77/122 (63.11%), Query Frame = 1 

Query: 18  DGLCKDGQ-----------ESQGMIPNV-----MVLPKSHEGQVDNANILFQRWKKNGCT 77
           DGLCK G+             +G+ PNV     M+      G VD ANILF++ ++NGCT
Sbjct: 353 DGLCKAGKLETAWELFEKLSQEGLQPNVVTYNIMISGFCKAGLVDKANILFEKMEENGCT 412

Query: 78  PNIITYNILLRGLCQSNKLDEVVELLHRMVHKDVSPDAITCT-------KAKKYKECLDL 117
           P+IITY+ILLR  CQSNK +EVV LLH+MV +DVSPD   CT       K +KYKECLDL
Sbjct: 413 PSIITYDILLRRFCQSNKSEEVVRLLHKMVQRDVSPDVSICTIVVDMLCKDEKYKECLDL 472

The following BLAST results are available for this feature:
BLAST of ClCG01G008110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PPR38_ARATH9.3e-0935.24Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... [more]
PP418_ARATH2.7e-0839.02Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana GN... [more]
PPR28_ARATH4.6e-0837.35Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana GN... [more]
PP327_ARATH7.9e-0835.00Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana GN... [more]
PP120_ARATH2.3e-0753.33Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th... [more]
BLAST of ClCG01G008110 vs. TrEMBL
Match NameE-valueIdentityDescription
M5VNT7_PRUPE1.4e-1643.09Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003905mg PE=4 SV=1[more]
M5VNT7_PRUPE4.1e-0335.59Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003905mg PE=4 SV=1[more]
W9S0N2_9ROSA1.1e-0324.68Uncharacterized protein OS=Morus notabilis GN=L484_005753 PE=4 SV=1[more]
A0A0A0K7C1_CUCSA1.1e-0333.75Uncharacterized protein OS=Cucumis sativus GN=Csa_7G230920 PE=4 SV=1[more]
D7SQM4_VITVI1.5e-0531.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0141g00780 PE=4 SV=... [more]
BLAST of ClCG01G008110 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G12700.15.2e-1035.24 ATP binding;nucleic acid binding;helicases[more]
AT5G46100.11.5e-0939.02 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G09900.12.6e-0937.35 Pentatricopeptide repeat (PPR-like) superfamily protein[more]
AT4G20090.14.4e-0935.00 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G74580.11.3e-0853.33 Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of ClCG01G008110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659100702|ref|XP_008451225.1|1.3e-2352.46PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-... [more]
gi|659100702|ref|XP_008451225.1|1.1e-0430.77PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-... [more]
gi|778727380|ref|XP_011659251.1|1.5e-0334.52PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-... [more]
gi|700189560|gb|KGN44793.1|1.4e-0930.00hypothetical protein Csa_7G387770 [Cucumis sativus][more]
gi|778727377|ref|XP_011659250.1|6.7e-0731.90PREDICTED: pentatricopeptide repeat-containing protein At3g22470, mitochondrial-... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G008110.1ClCG01G008110.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 62..103
score: 7.0
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 65..99
score: 2.6
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 63..97
score: 12.77coord: 28..62
score: 6
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 42..103
score: 5.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG01G008110Cla97C01G008460Watermelon (97103) v2wcgwmbB089
ClCG01G008110Bhi12G001013Wax gourdwcgwgoB194
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG01G008110Cucumber (Gy14) v1cgywcgB378
ClCG01G008110Cucurbita maxima (Rimu)cmawcgB260
ClCG01G008110Cucurbita maxima (Rimu)cmawcgB634
ClCG01G008110Cucurbita moschata (Rifu)cmowcgB248
ClCG01G008110Cucurbita moschata (Rifu)cmowcgB636
ClCG01G008110Wild cucumber (PI 183967)cpiwcgB394
ClCG01G008110Cucumber (Chinese Long) v2cuwcgB377
ClCG01G008110Melon (DHL92) v3.5.1mewcgB019
ClCG01G008110Watermelon (97103) v1wcgwmB144
ClCG01G008110Cucurbita pepo (Zucchini)cpewcgB166
ClCG01G008110Cucurbita pepo (Zucchini)cpewcgB370
ClCG01G008110Bottle gourd (USVL1VR-Ls)lsiwcgB008
ClCG01G008110Cucumber (Gy14) v2cgybwcgB341
ClCG01G008110Melon (DHL92) v3.6.1medwcgB018
ClCG01G008110Silver-seed gourdcarwcgB0462
ClCG01G008110Silver-seed gourdcarwcgB0800
ClCG01G008110Cucumber (Chinese Long) v3cucwcgB395