ClCG01G006940 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAACGCGTACGATGAACTGTTGATTGATGTTGCTGTTCTTGCTCCCTGCTTCGAATATGGTGGAAATTGGAATGCGATCTTCAACCCTAGACGTTTCTATATCGGTTCGTGATGCGCCGCTGTAATGTTTATGATCTCTGCTTCTAATTCTTACGTTTCCGCCATGTTTAGTTACTCCTCCTCCTCCCGTACCCTTCACATTCTTCTCCTCTTCACTGCCATTTCCCTCTCTTGCCTTGTTATTCTCAGAGAACTCAACTCCCTTCGCTACTTCCCTCTTTTCTCCTTCTCTACTTTTTCCGGTTCTCCTCCTGTTTCCCCTTTCGTCCCCTCCCTCGATGATGACGACGAGTCTTTTCCGGTGAGTTACCTCGGTTTTCTTATTTGTCTTCCGTTCATGTTTTTTTTTTCCCCATTTTGGTTGATTAATTGATTGCTTTTCGTTCTTTTAGTTTGGGTTGTCGATTAATCTACCTTCCTTAATCGTCTTTCTTGCTTCTCGTTCGTTTCCAATTGTGAGTTTGAATATCATTGATGAATTGGCCTTGATGATGAGGGATGGATATCTAATGATGATTCGTTTTGGTAGTGTATTTAAAATACAGGACGGCTATGACTTCTCTTTCTTGCTGAAATTCTTTAGCAACCTTTTGATGTTTAATAGACTATCTTTTCTTTACTTAGCTTGCATGGTTGCGCTCAGTGTGCCTCTTCTATTCCCCATTTCTATCTCTCTGTTTTTCATATGTGAGCGCAGAGTAGATTTTGTTTTTGCCTTTCAATTTGAACCTTCAAATCTTTGCCCCATTCTGCTTATTTGCTTTCCTTTGGGTCTGTTAGGGATAGTGAAAATGCCTTTAGGAAGGACAATTCTCGGTTTTCGGTTCCCGAATTGTGATCCATTTTCTTACGAAAAAACAAGAGATGAGTGATTCATTTTCCATGTAGCCAAATGGATAATTTTGTGTTGTGAATCTCTGAGTAGAAAGTGTACTGTTGTTTTGGAAGATGAATTTACCTGCTAGTATAACAATCATATTACTCACGGTGTAGCTGATATGTACAATGCATGGGAATGTAGCAAGACTTCTTTACTTATTATTTTTCTAGTTTATTCACAAGTTGCTTAACAACTCTTATGCTTGAGTATTGAACTGATTTGGATTGGATTTATCTTTTATGCTTATAGTTGTACTTTTATTTGCTTTTGATTTTTGCCTCTTTCGGCTGTGATTGTAGGATGTTGATGAGTATGGACTGGACAAGGTCTTAATGGATGCTGCAACAGATGACAAAACTGTTATTTTAACTACTTTAAATGAAGCATGGGCATCTCCAAATTCAGTCATTGATCTCTTTCTACAAAGCTTTAGAATTGGAAATCGAACTCACCAACTATTAGACCATTTGGTTATTATTGCATTGGACAAAAAGGCATTTGTTCGTTGCTTGGATATCCATGTCCATTGCTTTGCTCTTGCTACTGAAGGAGTTGATTTTCATTCTGAGGCACATTTTATGTCACCTGACTACTTGAAGATGATGTGGAGAAGGATTGATTTTTTGCGAATTGTTCTTGAGATGGGGTACAATTTTGTATTCACGGTATCATACTCTCTCCTTTTCCTTTGAGATGGTTGCTTCCTCAGTTTTCATTTACGTCAATAATTCTTTTATTTATTTATTTTTGTTTCCTTTTGAAGGTTGAGATATGTAATATAGTTTAATGTAATGCTCAGGAAGGTTGGATAAACAGCACGTAGGAAACTGATAATGGGTGGACAATCAATCTATGTTCAGTGAATTTTGGTATTACTAGGAAAGAAATTTAGAGTTTTCCTTGTGTAGAAGTTTTCTTGGAATTTATTATTTATCAATGTATATGGTAGACCATAAAGAACCACATAGATAAACAATACGTCTAGAATGTGGTAGGGTCACCTCTTTTGAAGTATGTTTTTGTACACGAATATATTAAGGACGTGTCTGAAACTAATTTTAAAATTTGAAATTTCAGTGAAAACGATTTTAGGAATCTGTGATTTCCTTTATGATTTATAGGAAGTGATTTTCACATAATCATCTTATGTTTCATTTTACACTTTTAAATGCTATTTCCATAGATCCAAATTGATTTTTGATAAAACCATGTTTGAGAGTGATTTTAAACACAACAAAAGTGATTTTAATAGTTTCAAAATCACTTTCAAACATGCCCTAAATCTTTTTGTGCTCAAGAGTTTCTATGGAAAATTTTGATATTTGCATTTAAAATTTAAATGAAATGAGTGACAAGACTAAGGTTGCCTGCAAGGAAGTTGGAGATGTCAATAATTTATAAGTGTTACACGTGTATCATGGTTTCTTTCCATTTCATACTCTAATTTGTGTATCCAACATGTATGGGTCTTAAGTCTTCATTTGGGAATCCAACATATATTAGGGTGTCTGGAGTCTCAAGTGTATGGACAGCATACACAATATCAGAAACCAGTTGTTTGTGCTTCACAAATACTTTACATGGAGAATAGGGAATCAAACTGGATGTCAATGCATCTTTTTTTGGTTTGGAATTACTTAAGAAGTCTATTTCCCAATGGATGAACCTATTCTCTAGGAACCCAAGATTTCCTCATATAGTTAAGGGAGAGGCTTCTGGGAAAGGAAAAATTCCTTTATTAATTAAACCTCACCTCTGCTCGACTTGTTCATTCTGAATTAGGAATCTAAGGCCACTCCAGTGACCACTTGGATGTCTTTCTCCTCCACTGTTTGAACATGCTTGGGTGGTTTCTTCAGGGGAAGATTTTTTTGGAGAGGGGTTCAATCAATTGTCACCTCTACTCCCCCTAGCTTGATTTAAGATAAGGAATTAGGGTCAATCCATTGCCTATTTGGTTGTCGTTCTCTTCCTCCACTATCAGCAGTAATTTCCATATTAGGTCTCCCTTGCCTTTTGTTTCAATAGTCAAACATTTGTGTACGATAGCATGACATGCCTTGCTTAAACTTTTGTCGTTTGGGATCTGTTATTTAGCTGTTCAATGTCTCTTATACATTCACCACTTGGCCGTTTACCAATTACTTCCATTAGGATATATCAGTTTTTATTTTCATGTATGTTGAAGGATGGAAATTTGCATGCGCCTCTCATGTCTTTATCAAACACTAGATCCGTGTATAATTTTTTCAAGTTTTCCTTTTGTATTTCTTTTAATTCCCATACTTTTGTTTCTTCCTTCAGGATGCTGATGTTATGTGGTTCAGGGATCCGTTCCCTTTCTTTGATATCAATGCAGATTTCCAAATTGCTTGTGATCAATACCTGGGCATCCCTGATGATTTAGATAACAGACCAAATGGAGGGTTTAACTATGTAAAATCCAATAATCGGTCAATTGAGTTCTACAAATATTGGTACTCAGCTCGGGAAACTTATCCAGGATACCATGATCAGGACGTTCTAAATAGGATCAAATACGATTTTTTCATCGATGAAATTGGACTAAAGATTAGATTCTTGGATACTGCTTACTTTGGTGGGTTCTGTGAACCCAGCAAAGATTTGAATCGTGTACTAACCATGCATGCAAACTGCTGTATTGGAATGGACAGTAAACTTCATGATCTCAGAATTATGCTCGAGGATTGGAAACATTACATGTCGATGCCGCCATATCGTAAGACATCATCAGCGTTGTCTTGGAGGGTTCCTCAGAACTGCAGGTATGGAACCATTTCTATGTCTTAGACAATTTTGCGCTATAATTAGGTACGTTTCTATTTCTTTATTCTTGAATTGCATTTTTTATATTCGAATCTTTTTCTCCTCCCGTTCCAGTGTCTGATCTTCTAATCTCCAAACAAAGAATTGATGAATCCTACCAAACTTGGAGTGATGCACTTTGAGCAATCATTTTTGCATTGCACATTTCGAGTTTTGTGAACCAAAGATATTTCTGCACTACAGCTTATACCAAAGTGAATGTTAGAAGAGTATTGTGGCCGTAGTCTTTATTTGCCAGTTTGTGTAAATTTATACCCAAATAAATTTCGAGGTCCCGCAATTGTACATCGCCAAATTAGAAAGCCTAACCATCATTAGGTAGTTCGTTTGCTAGAAATTTTGGTAAAACGATCAAATTCAGGTTTAGGTATACCTTTAGTTTTCAGATATAAGGAAATTTTCTCTTGCATTTTAATGCAACTATTAAGTCCACTTTTATGTACAACTCTATTACGCCGTAGCCACGATCCCCTATTATATAAAATGATCAAGCTTATAACCACATAAGATAGAATAAACTACACTTTCTCTCGTGGCCTATAAAAGGCTGATATTGTTTATGGGTAAGATATGTGTTT AGAACGCGTACGATGAACTGTTGATTGATGTTGCTGTTCTTGCTCCCTGCTTCGAATATGGTGGAAATTGGAATGCGATCTTCAACCCTAGACGTTTCTATATCGGTTCGTGATGCGCCGCTGTAATGTTTATGATCTCTGCTTCTAATTCTTACGTTTCCGCCATGTTTAGTTACTCCTCCTCCTCCCGTACCCTTCACATTCTTCTCCTCTTCACTGCCATTTCCCTCTCTTGCCTTGTTATTCTCAGAGAACTCAACTCCCTTCGCTACTTCCCTCTTTTCTCCTTCTCTACTTTTTCCGGTTCTCCTCCTGTTTCCCCTTTCGTCCCCTCCCTCGATGATGACGACGAGTCTTTTCCGTTTGGGTTGTCGATTAATCTACCTTCCTTAATCGTCTTTCTTGCTTCTCGTTCGTTTCCAATTGATGTTGATGAGTATGGACTGGACAAGGTCTTAATGGATGCTGCAACAGATGACAAAACTGTTATTTTAACTACTTTAAATGAAGCATGGGCATCTCCAAATTCAGTCATTGATCTCTTTCTACAAAGCTTTAGAATTGGAAATCGAACTCACCAACTATTAGACCATTTGGTTATTATTGCATTGGACAAAAAGGCATTTGTTCGTTGCTTGGATATCCATGTCCATTGCTTTGCTCTTGCTACTGAAGGAGTTGATTTTCATTCTGAGGCACATTTTATGTCACCTGACTACTTGAAGATGATGTGGAGAAGGATTGATTTTTTGCGAATTGTTCTTGAGATGGGGTACAATTTTGTATTCACGGATGCTGATGTTATGTGGTTCAGGGATCCGTTCCCTTTCTTTGATATCAATGCAGATTTCCAAATTGCTTGTGATCAATACCTGGGCATCCCTGATGATTTAGATAACAGACCAAATGGAGGGTTTAACTATGTAAAATCCAATAATCGGTCAATTGAGTTCTACAAATATTGGTACTCAGCTCGGGAAACTTATCCAGGATACCATGATCAGGACGTTCTAAATAGGATCAAATACGATTTTTTCATCGATGAAATTGGACTAAAGATTAGATTCTTGGATACTGCTTACTTTGGTGGGTTCTGTGAACCCAGCAAAGATTTGAATCGTGTACTAACCATGCATGCAAACTGCTGTATTGGAATGGACAGTAAACTTCATGATCTCAGAATTATGCTCGAGGATTGGAAACATTACATGTCGATGCCGCCATATCGTAAGACATCATCAGCGTTGTCTTGGAGGGTTCCTCAGAACTGCAGGTATGGAACCATTTCTATGTCTTAGACAATTTTGCGCTATAATTAGGTACGTTTCTATTTCTTTATTCTTGAATTGCATTTTTTATATTCGAATCTTTTTCTCCTCCCGTTCCAGTGTCTGATCTTCTAATCTCCAAACAAAGAATTGATGAATCCTACCAAACTTGGAGTGATGCACTTTGAGCAATCATTTTTGCATTGCACATTTCGAGTTTTGTGAACCAAAGATATTTCTGCACTACAGCTTATACCAAAGTGAATGTTAGAAGAGTATTGTGGCCGTAGTCTTTATTTGCCAGTTTGTGTAAATTTATACCCAAATAAATTTCGAGGTCCCGCAATTGTACATCGCCAAATTAGAAAGCCTAACCATCATTAGGTAGTTCGTTTGCTAGAAATTTTGGTAAAACGATCAAATTCAGGTTTAGGTATACCTTTAGTTTTCAGATATAAGGAAATTTTCTCTTGCATTTTAATGCAACTATTAAGTCCACTTTTATGTACAACTCTATTACGCCGTAGCCACGATCCCCTATTATATAAAATGATCAAGCTTATAACCACATAAGATAGAATAAACTACACTTTCTCTCGTGGCCTATAAAAGGCTGATATTGTTTATGGGTAAGATATGTGTTT ATGTTTATGATCTCTGCTTCTAATTCTTACGTTTCCGCCATGTTTAGTTACTCCTCCTCCTCCCGTACCCTTCACATTCTTCTCCTCTTCACTGCCATTTCCCTCTCTTGCCTTGTTATTCTCAGAGAACTCAACTCCCTTCGCTACTTCCCTCTTTTCTCCTTCTCTACTTTTTCCGGTTCTCCTCCTGTTTCCCCTTTCGTCCCCTCCCTCGATGATGACGACGAGTCTTTTCCGTTTGGGTTGTCGATTAATCTACCTTCCTTAATCGTCTTTCTTGCTTCTCGTTCGTTTCCAATTGATGTTGATGAGTATGGACTGGACAAGGTCTTAATGGATGCTGCAACAGATGACAAAACTGTTATTTTAACTACTTTAAATGAAGCATGGGCATCTCCAAATTCAGTCATTGATCTCTTTCTACAAAGCTTTAGAATTGGAAATCGAACTCACCAACTATTAGACCATTTGGTTATTATTGCATTGGACAAAAAGGCATTTGTTCGTTGCTTGGATATCCATGTCCATTGCTTTGCTCTTGCTACTGAAGGAGTTGATTTTCATTCTGAGGCACATTTTATGTCACCTGACTACTTGAAGATGATGTGGAGAAGGATTGATTTTTTGCGAATTGTTCTTGAGATGGGGTACAATTTTGTATTCACGGATGCTGATGTTATGTGGTTCAGGGATCCGTTCCCTTTCTTTGATATCAATGCAGATTTCCAAATTGCTTGTGATCAATACCTGGGCATCCCTGATGATTTAGATAACAGACCAAATGGAGGGTTTAACTATGTAAAATCCAATAATCGGTCAATTGAGTTCTACAAATATTGGTACTCAGCTCGGGAAACTTATCCAGGATACCATGATCAGGACGTTCTAAATAGGATCAAATACGATTTTTTCATCGATGAAATTGGACTAAAGATTAGATTCTTGGATACTGCTTACTTTGGTGGGTTCTGTGAACCCAGCAAAGATTTGAATCGTGTACTAACCATGCATGCAAACTGCTGTATTGGAATGGACAGTAAACTTCATGATCTCAGAATTATGCTCGAGGATTGGAAACATTACATGTCGATGCCGCCATATCGTAAGACATCATCAGCGTTGTCTTGGAGGGTTCCTCAGAACTGCAGGTATGGAACCATTTCTATGTCTTAG MFMISASNSYVSAMFSYSSSSRTLHILLLFTAISLSCLVILRELNSLRYFPLFSFSTFSGSPPVSPFVPSLDDDDESFPFGLSINLPSLIVFLASRSFPIDVDEYGLDKVLMDAATDDKTVILTTLNEAWASPNSVIDLFLQSFRIGNRTHQLLDHLVIIALDKKAFVRCLDIHVHCFALATEGVDFHSEAHFMSPDYLKMMWRRIDFLRIVLEMGYNFVFTDADVMWFRDPFPFFDINADFQIACDQYLGIPDDLDNRPNGGFNYVKSNNRSIEFYKYWYSARETYPGYHDQDVLNRIKYDFFIDEIGLKIRFLDTAYFGGFCEPSKDLNRVLTMHANCCIGMDSKLHDLRIMLEDWKHYMSMPPYRKTSSALSWRVPQNCRYGTISMS
BLAST of ClCG01G006940 vs. Swiss-Prot
Match: Y4597_ARATH (Uncharacterized protein At4g15970 OS=Arabidopsis thaliana GN=At4g15970 PE=2 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 8.3e-85 Identity = 149/279 (53.41%), Postives = 199/279 (71.33%), Query Frame = 1
BLAST of ClCG01G006940 vs. Swiss-Prot
Match: Y1869_ARATH (Uncharacterized protein At1g28695 OS=Arabidopsis thaliana GN=At1g28695 PE=2 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 6.5e-53 Identity = 111/282 (39.36%), Postives = 167/282 (59.22%), Query Frame = 1
BLAST of ClCG01G006940 vs. TrEMBL
Match: A0A0A0KPV2_CUCSA (Glycosyltransferase OS=Cucumis sativus GN=Csa_5G107050 PE=3 SV=1) HSP 1 Score: 641.0 bits (1652), Expect = 9.7e-181 Identity = 312/369 (84.55%), Postives = 324/369 (87.80%), Query Frame = 1
BLAST of ClCG01G006940 vs. TrEMBL
Match: A0A072VSD7_MEDTR (Glycosyltransferase OS=Medicago truncatula GN=MTR_1g112300 PE=3 SV=1) HSP 1 Score: 473.8 bits (1218), Expect = 2.0e-130 Identity = 234/368 (63.59%), Postives = 275/368 (74.73%), Query Frame = 1
BLAST of ClCG01G006940 vs. TrEMBL
Match: A0A067KPV4_JATCU (Glycosyltransferase OS=Jatropha curcas GN=JCGZ_04849 PE=3 SV=1) HSP 1 Score: 471.9 bits (1213), Expect = 7.8e-130 Identity = 223/372 (59.95%), Postives = 280/372 (75.27%), Query Frame = 1
BLAST of ClCG01G006940 vs. TrEMBL
Match: A0A0B2RYA6_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_013623 PE=4 SV=1) HSP 1 Score: 468.8 bits (1205), Expect = 6.6e-129 Identity = 234/371 (63.07%), Postives = 277/371 (74.66%), Query Frame = 1
BLAST of ClCG01G006940 vs. TrEMBL
Match: K7LLW7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G280600 PE=4 SV=1) HSP 1 Score: 468.8 bits (1205), Expect = 6.6e-129 Identity = 234/371 (63.07%), Postives = 277/371 (74.66%), Query Frame = 1
BLAST of ClCG01G006940 vs. TAIR10
Match: AT1G14590.1 (AT1G14590.1 Nucleotide-diphospho-sugar transferase family protein) HSP 1 Score: 427.9 bits (1099), Expect = 6.5e-120 Identity = 199/283 (70.32%), Postives = 233/283 (82.33%), Query Frame = 1
BLAST of ClCG01G006940 vs. TAIR10
Match: AT2G02061.1 (AT2G02061.1 Nucleotide-diphospho-sugar transferase family protein) HSP 1 Score: 400.2 bits (1027), Expect = 1.5e-111 Identity = 201/337 (59.64%), Postives = 239/337 (70.92%), Query Frame = 1
BLAST of ClCG01G006940 vs. TAIR10
Match: AT5G44820.1 (AT5G44820.1 Nucleotide-diphospho-sugar transferase family protein) HSP 1 Score: 365.5 bits (937), Expect = 4.0e-101 Identity = 178/358 (49.72%), Postives = 236/358 (65.92%), Query Frame = 1
BLAST of ClCG01G006940 vs. TAIR10
Match: AT4G19970.1 (AT4G19970.1 Nucleotide-diphospho-sugar transferase, predicted (InterPro:IPR005069)) HSP 1 Score: 357.5 bits (916), Expect = 1.1e-98 Identity = 160/275 (58.18%), Postives = 207/275 (75.27%), Query Frame = 1
HSP 2 Score: 326.6 bits (836), Expect = 2.0e-89 Identity = 144/274 (52.55%), Postives = 196/274 (71.53%), Query Frame = 1
BLAST of ClCG01G006940 vs. TAIR10
Match: AT4G15970.1 (AT4G15970.1 Nucleotide-diphospho-sugar transferase family protein) HSP 1 Score: 316.2 bits (809), Expect = 2.8e-86 Identity = 149/279 (53.41%), Postives = 199/279 (71.33%), Query Frame = 1
BLAST of ClCG01G006940 vs. NCBI nr
Match: gi|449463499|ref|XP_004149471.1| (PREDICTED: uncharacterized protein At4g15970 [Cucumis sativus]) HSP 1 Score: 641.0 bits (1652), Expect = 1.4e-180 Identity = 312/369 (84.55%), Postives = 324/369 (87.80%), Query Frame = 1
BLAST of ClCG01G006940 vs. NCBI nr
Match: gi|659072690|ref|XP_008466761.1| (PREDICTED: uncharacterized protein At4g15970 [Cucumis melo]) HSP 1 Score: 640.6 bits (1651), Expect = 1.8e-180 Identity = 315/369 (85.37%), Postives = 326/369 (88.35%), Query Frame = 1
BLAST of ClCG01G006940 vs. NCBI nr
Match: gi|1009152804|ref|XP_015894295.1| (PREDICTED: uncharacterized protein At4g15970 [Ziziphus jujuba]) HSP 1 Score: 480.3 bits (1235), Expect = 3.1e-132 Identity = 238/365 (65.21%), Postives = 278/365 (76.16%), Query Frame = 1
BLAST of ClCG01G006940 vs. NCBI nr
Match: gi|502121038|ref|XP_004497167.1| (PREDICTED: uncharacterized protein At4g15970 [Cicer arietinum]) HSP 1 Score: 478.8 bits (1231), Expect = 9.1e-132 Identity = 233/361 (64.54%), Postives = 275/361 (76.18%), Query Frame = 1
BLAST of ClCG01G006940 vs. NCBI nr
Match: gi|802597746|ref|XP_012072412.1| (PREDICTED: uncharacterized protein At4g15970 isoform X2 [Jatropha curcas]) HSP 1 Score: 474.9 bits (1221), Expect = 1.3e-130 Identity = 224/374 (59.89%), Postives = 282/374 (75.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|