ClCG01G006250 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G006250
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionB3 domain-containing protein
LocationCG_Chr01 : 6941236 .. 6941970 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATGGGGACAGCAGTTGAAGGCTTCAGAATGGGTCTTGATTTTCCTGATTTAAACGAAATTTACATACCTCGGAGAAGAAGGGGATCTTCCGGCACCGGAAAGAAAGAACAACCCAAAACTGAAACCAAACTCCCCTTGACTATGTTGGAGGCTGCGGCTATTCTAATAGAGATGGCGAACTCTGTTTCTGATTTTGAACCGAAAAAATTTAACAGCCACAAAAGAAAGAAGCCTCCGACGCCGACGAAGAAACAGAGGAAGAAGAAGGTAAAACAGAGTGAGTATCCGTCGATTCCTGAGATGCCGGCCGCAATGAGAGATCGGATTGTAGAGATGGGTGGGTATGAAATTAGATTGGTGATTCAAAAACAACTCCAAGACACGGATTTAAACAAGAACCATGGTCGTTTATCCCTACCGGCAAAGAAACTGTTGTTCGATTTTGCAACAGAGGAGGAGAGGAAGTTGCTGAGCGAACAAGAGAACAAGAACAAAAAGGGGATGAATGTAATGATTGTGGATGATGTTCTTCAAGAAAGAATGATTTGTTTGAAGAAGTGGAAGATTGGAAGTGGGGATGTATATTGTTTGATGACACAGTGGAATTCGTTTGTGGAAGAAACGGGATTGAAAAGTGGGCAACATATTCAACTTTGGTGCTTCAGAAAAAATGATGAACTCGAGGCATCTCGCCTATGCTTCGCTATGGTTAAGTTAGCACCTTGCTAA

mRNA sequence

ATGGGAATGGGGACAGCAGTTGAAGGCTTCAGAATGGGTCTTGATTTTCCTGATTTAAACGAAATTTACATACCTCGGAGAAGAAGGGGATCTTCCGGCACCGGAAAGAAAGAACAACCCAAAACTGAAACCAAACTCCCCTTGACTATGTTGGAGGCTGCGGCTATTCTAATAGAGATGGCGAACTCTGTTTCTGATTTTGAACCGAAAAAATTTAACAGCCACAAAAGAAAGAAGCCTCCGACGCCGACGAAGAAACAGAGGAAGAAGAAGGTAAAACAGAGTGAGTATCCGTCGATTCCTGAGATGCCGGCCGCAATGAGAGATCGGATTGTAGAGATGGGTGGGTATGAAATTAGATTGGTGATTCAAAAACAACTCCAAGACACGGATTTAAACAAGAACCATGGTCGTTTATCCCTACCGGCAAAGAAACTGTTGTTCGATTTTGCAACAGAGGAGGAGAGGAAGTTGCTGAGCGAACAAGAGAACAAGAACAAAAAGGGGATGAATGTAATGATTGTGGATGATGTTCTTCAAGAAAGAATGATTTGTTTGAAGAAGTGGAAGATTGGAAGTGGGGATGTATATTGTTTGATGACACAGTGGAATTCGTTTGTGGAAGAAACGGGATTGAAAAGTGGGCAACATATTCAACTTTGGTGCTTCAGAAAAAATGATGAACTCGAGGCATCTCGCCTATGCTTCGCTATGGTTAAGTTAGCACCTTGCTAA

Coding sequence (CDS)

ATGGGAATGGGGACAGCAGTTGAAGGCTTCAGAATGGGTCTTGATTTTCCTGATTTAAACGAAATTTACATACCTCGGAGAAGAAGGGGATCTTCCGGCACCGGAAAGAAAGAACAACCCAAAACTGAAACCAAACTCCCCTTGACTATGTTGGAGGCTGCGGCTATTCTAATAGAGATGGCGAACTCTGTTTCTGATTTTGAACCGAAAAAATTTAACAGCCACAAAAGAAAGAAGCCTCCGACGCCGACGAAGAAACAGAGGAAGAAGAAGGTAAAACAGAGTGAGTATCCGTCGATTCCTGAGATGCCGGCCGCAATGAGAGATCGGATTGTAGAGATGGGTGGGTATGAAATTAGATTGGTGATTCAAAAACAACTCCAAGACACGGATTTAAACAAGAACCATGGTCGTTTATCCCTACCGGCAAAGAAACTGTTGTTCGATTTTGCAACAGAGGAGGAGAGGAAGTTGCTGAGCGAACAAGAGAACAAGAACAAAAAGGGGATGAATGTAATGATTGTGGATGATGTTCTTCAAGAAAGAATGATTTGTTTGAAGAAGTGGAAGATTGGAAGTGGGGATGTATATTGTTTGATGACACAGTGGAATTCGTTTGTGGAAGAAACGGGATTGAAAAGTGGGCAACATATTCAACTTTGGTGCTTCAGAAAAAATGATGAACTCGAGGCATCTCGCCTATGCTTCGCTATGGTTAAGTTAGCACCTTGCTAA

Protein sequence

MGMGTAVEGFRMGLDFPDLNEIYIPRRRRGSSGTGKKEQPKTETKLPLTMLEAAAILIEMANSVSDFEPKKFNSHKRKKPPTPTKKQRKKKVKQSEYPSIPEMPAAMRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEERKLLSEQENKNKKGMNVMIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFAMVKLAPC
Homology
[Close]
BLAST of ClCG01G006250 vs. Swiss-Prot
Match: Y1592_ARATH (B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana GN=At1g05920 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 4.1e-13
Identity = 54/163 (33.13%), Postives = 80/163 (49.08%), Query Frame = 1 

Query: 88  RKKKVKQSEY--PSIPEMPAAMRDRIVEMGGY-EIRLVIQKQLQDTDLNKNHGRLSLPAK 147
           R+KK    E+  P  P+ P  +   +  M G  + +L+I+K L   D++    RLS+P  
Sbjct: 146 RRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNRLSIPIN 205

Query: 148 KLL-FDFATEEERKLLSEQE--NKNKKGMNVMIVDDVLQERMICLKKW--KIGSGDVY-- 207
            ++  DF T +E +L+ E E  N+   G+   +VD   ++  +  K+W     SG  Y  
Sbjct: 206 TVIQNDFLTLDESRLIDEDEITNEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDSGSSYWS 265

Query: 208 -CLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFAMV 240
             L  +W++ VE  GLK G  I LW FR ND      LCFA+V
Sbjct: 266 FVLRGEWSNVVETNGLKEGDKISLWSFRSND-----ILCFALV 303

[Close]
BLAST of ClCG01G006250 vs. Swiss-Prot
Match: Y3485_ARATH (Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana GN=At3g24850 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.1e-13
Identity = 58/177 (32.77%), Postives = 81/177 (45.76%), Query Frame = 1 

Query: 74  SHKRKKPPTPTKKQRKKKVKQSEYPSIPE-----MPAAMRDRIVEMGGYEIRLVIQKQLQ 133
           S KR+      +    KK K + +P         +   MRD        + +L+ +K L 
Sbjct: 179 SRKRRAVEERKRTGGFKKAKVAPFPGTARDTPKWLVKVMRDM---KEAKDAKLIFEKTLF 238

Query: 134 DTDLNKNHGRLSLPAKKLLF-DFATEEERKLLSEQENKNKK-GMNVMIVDDVLQERMICL 193
            TD+N    RLS+P   LL  DF T  E +++ E  N NKK G+  ++VD    +  + L
Sbjct: 239 VTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKEDINNNKKIGVGAILVDQRSVKWGVML 298

Query: 194 KKWKI----GSGD-VYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFAM 239
           K+W++    G G   Y L+  WN  VE  GLK G +I +W FR         LCFAM
Sbjct: 299 KRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRCR-----GVLCFAM 347

[Close]
BLAST of ClCG01G006250 vs. Swiss-Prot
Match: Y2142_ARATH (B3 domain-containing protein At2g31420 OS=Arabidopsis thaliana GN=At2g31420 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.5e-12
Identity = 51/171 (29.82%), Postives = 86/171 (50.29%), Query Frame = 1 

Query: 81  PTPTKKQRKKKVKQSEYPSIPEMPAAMRDRIVEM----GGYEIRLVIQKQ-LQDTDLNKN 140
           P+P+++ +   V      S     +++ D +V++     GY+ +L+I+++ L  TDL KN
Sbjct: 34  PSPSQQNKSDIVSLCPADSPETCNSSIPDWLVKVMRKENGYDPKLIIKRRVLCTTDLRKN 93

Query: 141 HGRLSLPAKKL-LFDFATEEERKLLSEQENK-NKKGMNVMIVDDVLQERMICLKKWKIGS 200
            G LS+   KL   DF TE+E + L E   K  + G+ V +VD    + ++ LKKW   +
Sbjct: 94  QGCLSMHLSKLEKSDFLTEDETRFLDEDFLKAKRDGLKVFLVDPESDKHVVYLKKWNGNT 153

Query: 201 GDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFAMVKLAPC 245
              Y L   WN+ +++   K    I++W FR      + +LCFA+     C
Sbjct: 154 VWKYVLSHGWNNVIDKKIFKVNDVIEIWSFRDG----SGKLCFALSSPTRC 200

[Close]
BLAST of ClCG01G006250 vs. Swiss-Prot
Match: Y2741_ARATH (Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana GN=At2g27410 PE=3 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 5.9e-12
Identity = 52/171 (30.41%), Postives = 80/171 (46.78%), Query Frame = 1 

Query: 76  KRKKPPTPTKKQRKKK--VKQSEYPSIPEMPAAMRDRIV--EMGGYEIRLVIQKQLQDTD 135
           K K+P    K+  KK+  +   E   I   P      ++  E  GY  +L+  +QL  TD
Sbjct: 39  KEKRPINVEKRSHKKRKIICPLEEEPIQTTPPEWLLNVMRREENGYNPKLISTRQLYKTD 98

Query: 136 LNKNHGRLSLPAKKLLF-DFATEEERKLLSEQENK-NKKGMNVMIVDDVLQERMICLKKW 195
           L K   RLS+P K++   DF TE+E +++ E   K    G+ V  VD  L + ++ L+KW
Sbjct: 99  LKKTEARLSVPFKQVKTPDFLTEDETRIIHENAMKIRDNGVPVNFVDPELNKHVLELRKW 158

Query: 196 KIGSGDVYCLMTQWNSFVE--ETGLKSGQHIQLWCFRKNDELEASRLCFAM 239
           K+    +Y  +  W + ++  +T  K      LW FR        +LCFA+
Sbjct: 159 KMKGNWIYVFVKGWKNVLDACKTLFKEDDVYPLWSFRSG----TGKLCFAL 205

[Close]
BLAST of ClCG01G006250 vs. Swiss-Prot
Match: Y2467_ARATH (B3 domain-containing protein At2g24670 OS=Arabidopsis thaliana GN=At2g24670 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.2e-10
Identity = 53/206 (25.73%), Postives = 104/206 (50.49%), Query Frame = 1 

Query: 47  PLTMLEAAAILIEMANSVSDFEPKKFNSHKRKKPPTPTKKQRK-KKVKQSEYPSIPEM-- 106
           P T++E+ + + +  +S+ +   ++  +     P +P  +QRK KK K+S   S  +   
Sbjct: 50  PSTVMESKSHIHD--HSLRESPTRRSRNRHDLPPMSPPMEQRKSKKAKRSTDASSSKTRE 109

Query: 107 --PAAMRDRIVEMGGYEI----RLVIQKQLQDTDLNKNHGRLSLPAKKLL-FDFATEEER 166
             P  +   +    G ++    + +I K+L  TD++ +  RLS+P  +++  +F   EE+
Sbjct: 110 PTPGWLISLMRSKNGGDVEDNSKKIIDKELFQTDVDPHQSRLSIPVSQIVELEFLNHEEK 169

Query: 167 KLLSEQENK-NKKGMNVMIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLKSG 226
           + + E  N+  K+G++ ++VD  L+E  + L+   +    +Y L+  WN  V +  L+  
Sbjct: 170 RAIEEDANRVRKEGVDAILVDSHLREFPVNLRLRDMRGILLYNLVAGWNQVVTDCLLEEN 229

Query: 227 QHIQLWCFRKNDELEASRLCFAMVKL 242
            +I+LW F  +D      L FA+V L
Sbjct: 230 TNIRLWSFHADD-----TLYFALVPL 248

[Close]
BLAST of ClCG01G006250 vs. TrEMBL
Match: A0A0A0KP87_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 3.3e-86
Identity = 176/268 (65.67%), Postives = 200/268 (74.63%), Query Frame = 1 

Query: 1   MGMGTAVE-GFRMGLDFPDLNEIYIPRRRRGSS-GTGKKEQPKTETKLPLTMLEAAAILI 60
           M M T+V  G R+ L  PDLN +Y+PR+RRGSS G GKKEQ  TET+LPL+M EAA+ILI
Sbjct: 1   MVMETSVRCGLRICLQLPDLNNVYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASILI 60

Query: 61  EMANSVSDFEPKKFN-SHKRKKPPTPT---------------------KKQRKKKVKQSE 120
           ++ANSV D  P+K N + KRK PPT T                     KKQRK  V QSE
Sbjct: 61  QLANSVPDVPPQKINKTRKRKNPPTQTEASTSRTKQQRKKNVASTSRTKKQRKMNVDQSE 120

Query: 121 YPSIPEMPAAMRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEER 180
            PS   MP AMRDRI+EMGGYEI LVIQKQL DTDLNKNHGRLS+  K+L FDFATEEE 
Sbjct: 121 RPS---MPVAMRDRILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEES 180

Query: 181 KLLSEQENKNKKGMNVMIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLKSGQ 240
           KLLSEQENKNK G+NVMI+DDVL+ERM+CLKKWKIGSG VYCLMT+WN  VEE GLKSG+
Sbjct: 181 KLLSEQENKNKMGINVMILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGE 240

Query: 241 HIQLWCFRKNDELEASRLCFAMVKLAPC 245
            IQ+W FRK+DE EA RLC A+VKLA C
Sbjct: 241 EIQVWSFRKDDEDEAHRLCLALVKLATC 265

[Close]
BLAST of ClCG01G006250 vs. TrEMBL
Match: A0A0A0KUX9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 5.3e-84
Identity = 170/248 (68.55%), Postives = 194/248 (78.23%), Query Frame = 1 

Query: 3   MGTAVE-GFRMGLDFPDLNEIYIPRRRRGSS-GTGKKEQPKTETKLPLTMLEAAAILIEM 62
           M T+V  G R+ L  PDLN +Y+PR+RRGSS G GKKEQ  TET+LPL+M EAA+ILI++
Sbjct: 1   METSVRCGLRICLQLPDLNNVYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASILIQL 60

Query: 63  ANSVSDFEPKKFN-SHKRKKPPTPT-------KKQRKKKVKQSEYPSIPEMPAAMRDRIV 122
           ANSV D   +K N + KRK PPT T       KKQRK  V QSE PS   MP AMRDRI+
Sbjct: 61  ANSVPDVPLQKINKTRKRKNPPTQTEASTSRTKKQRKMNVDQSERPS---MPVAMRDRIL 120

Query: 123 EMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEERKLLSEQENKNKKGMNV 182
           EMGGYEI LVIQKQL DTDLNKNHGRLS+  K+L FDFATEEE KLLSEQENKNK G+NV
Sbjct: 121 EMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGINV 180

Query: 183 MIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEAS 241
           M +DDVL+ERM+CLKKWKIGSG VYCLMT+WN  VEE GLKSG+ IQ+W FRK+DE EA 
Sbjct: 181 MTLDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDEDEAH 240

[Close]
BLAST of ClCG01G006250 vs. TrEMBL
Match: A0A0A0KSY8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.0e-79
Identity = 166/267 (62.17%), Postives = 194/267 (72.66%), Query Frame = 1 

Query: 1   MGMGTAVEG-FRMGLDFPDLNEIYIPRRRRGSS-GTGKKEQPKTETKLPLTMLEAAAILI 60
           M M T V G  R+      LN IYIPR+RRGSS G GK++Q  TET+LPL+M+EAA+ILI
Sbjct: 1   MTMDTTVHGGLRICHLHSHLNNIYIPRKRRGSSSGAGKEQQYITETELPLSMVEAASILI 60

Query: 61  EMANSVS--DFEPKKFN----------------SHKRKKPPTPT-------KKQRKKKVK 120
           E+ANSV   D + +KFN                +HKRK PP PT       KKQRKK V 
Sbjct: 61  ELANSVPVPDVQRQKFNKTANSVPDVERQKLNKTHKRKNPPIPTEASTSKTKKQRKKNVN 120

Query: 121 QSEYPSIPEMPAAMRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATE 180
           + E+P    MP  MRDRI+EMGGYEIRLVIQK+L DTDLNKNHGR S+  K L FDFATE
Sbjct: 121 KREHPP---MPVTMRDRILEMGGYEIRLVIQKELTDTDLNKNHGRFSMNTKLLSFDFATE 180

Query: 181 EERKLLSEQENKNKKGMNVMIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLK 240
           EE KLLSEQENKNKKG+NVMI+DD L+ER++CLKKWKIGSG+VYCLMTQWN  VE+ G K
Sbjct: 181 EESKLLSEQENKNKKGINVMILDDALEERILCLKKWKIGSGEVYCLMTQWNLMVEKRGFK 240

[Close]
BLAST of ClCG01G006250 vs. TrEMBL
Match: A0A0A0LRL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G365090 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.2e-53
Identity = 120/232 (51.72%), Postives = 156/232 (67.24%), Query Frame = 1 

Query: 22  IYIPRRRRGSSGTGKKEQPKTETKLPLTMLEAAAILIEMANSVSDFEPKKFNS--HKRKK 81
           +++PRR+R  S   KKE         ++M+EAA ILI MAN       KK +    + KK
Sbjct: 21  VHVPRRKRSGSVESKKEDDGAS----ISMVEAAKILIAMANDGFCKRKKKESPTVKQSKK 80

Query: 82  PPT-------PTKKQRKKKVKQSEYPSIPEMPAAMRDRIVEMGGYEIRLVIQKQLQDTDL 141
            PT       PT KQ+KK ++  E  S PEMPA+MRDR+V  GGYEI+LVIQKQL+++D+
Sbjct: 81  SPTAKKRKTSPTAKQKKKSMELEE--SFPEMPASMRDRVVGKGGYEIQLVIQKQLEESDV 140

Query: 142 NKNHGRLSLPAKKLLFDFATEEERKLLSEQ---ENKNKKGMNVMIVDDVLQERMICLKKW 201
           ++NHGRL LPAKK+  +F  EEER +L E+   + KNKKG+ V ++DD L+E  +CLKKW
Sbjct: 141 SRNHGRLCLPAKKVKTEFVREEERNILEEENDGKKKNKKGLEVGVMDDSLRESSMCLKKW 200

Query: 202 KIGSGDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFAMVKL 242
           KIGSG  YCLM  WN FVEE GL+SG +IQLW FR N    + +LCFA+VKL
Sbjct: 201 KIGSGKFYCLMKNWNCFVEENGLRSGDYIQLWSFRNN---ISDKLCFAIVKL 243

[Close]
BLAST of ClCG01G006250 vs. TrEMBL
Match: A0A0A0KPD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550750 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.4e-52
Identity = 102/133 (76.69%), Postives = 116/133 (87.22%), Query Frame = 1 

Query: 112 VEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEERKLLSEQENKNKKGMN 171
           +EM GYEI LVIQKQL DTDLNKNHGRLS+  K+L FDFATEEE KLLSEQENKNK G+N
Sbjct: 3   LEMCGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGIN 62

Query: 172 VMIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEA 231
           VM++DDVL+ERM+CLKKWKIGSG+VYCLMT+WN  VEE GLKSG+ IQ+W FRK+DE EA
Sbjct: 63  VMLLDDVLEERMLCLKKWKIGSGEVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDEDEA 122

Query: 232 SRLCFAMVKLAPC 245
            RLC A+VKLA C
Sbjct: 123 HRLCLALVKLATC 135

[Close]
BLAST of ClCG01G006250 vs. TAIR10
Match: AT1G05920.1 (AT1G05920.1 Domain of unknown function (DUF313) )

HSP 1 Score: 76.6 bits (187), Expect = 2.3e-14
Identity = 54/163 (33.13%), Postives = 80/163 (49.08%), Query Frame = 1 

Query: 88  RKKKVKQSEY--PSIPEMPAAMRDRIVEMGGY-EIRLVIQKQLQDTDLNKNHGRLSLPAK 147
           R+KK    E+  P  P+ P  +   +  M G  + +L+I+K L   D++    RLS+P  
Sbjct: 146 RRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQNRLSIPIN 205

Query: 148 KLL-FDFATEEERKLLSEQE--NKNKKGMNVMIVDDVLQERMICLKKW--KIGSGDVY-- 207
            ++  DF T +E +L+ E E  N+   G+   +VD   ++  +  K+W     SG  Y  
Sbjct: 206 TVIQNDFLTLDESRLIDEDEITNEGNMGVAAFLVDQRTKKWNMGFKQWFMTTDSGSSYWS 265

Query: 208 -CLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFAMV 240
             L  +W++ VE  GLK G  I LW FR ND      LCFA+V
Sbjct: 266 FVLRGEWSNVVETNGLKEGDKISLWSFRSND-----ILCFALV 303

[Close]
BLAST of ClCG01G006250 vs. TAIR10
Match: AT3G24850.1 (AT3G24850.1 Domain of unknown function (DUF313) )

HSP 1 Score: 75.5 bits (184), Expect = 5.1e-14
Identity = 58/177 (32.77%), Postives = 81/177 (45.76%), Query Frame = 1 

Query: 74  SHKRKKPPTPTKKQRKKKVKQSEYPSIPE-----MPAAMRDRIVEMGGYEIRLVIQKQLQ 133
           S KR+      +    KK K + +P         +   MRD        + +L+ +K L 
Sbjct: 179 SRKRRAVEERKRTGGFKKAKVAPFPGTARDTPKWLVKVMRDM---KEAKDAKLIFEKTLF 238

Query: 134 DTDLNKNHGRLSLPAKKLLF-DFATEEERKLLSEQENKNKK-GMNVMIVDDVLQERMICL 193
            TD+N    RLS+P   LL  DF T  E +++ E  N NKK G+  ++VD    +  + L
Sbjct: 239 VTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKEDINNNKKIGVGAILVDQRSVKWGVML 298

Query: 194 KKWKI----GSGD-VYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFAM 239
           K+W++    G G   Y L+  WN  VE  GLK G +I +W FR         LCFAM
Sbjct: 299 KRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRCR-----GVLCFAM 347

[Close]
BLAST of ClCG01G006250 vs. TAIR10
Match: AT2G31420.1 (AT2G31420.1 Domain of unknown function (DUF313) )

HSP 1 Score: 73.6 bits (179), Expect = 1.9e-13
Identity = 51/171 (29.82%), Postives = 86/171 (50.29%), Query Frame = 1 

Query: 81  PTPTKKQRKKKVKQSEYPSIPEMPAAMRDRIVEM----GGYEIRLVIQKQ-LQDTDLNKN 140
           P+P+++ +   V      S     +++ D +V++     GY+ +L+I+++ L  TDL KN
Sbjct: 34  PSPSQQNKSDIVSLCPADSPETCNSSIPDWLVKVMRKENGYDPKLIIKRRVLCTTDLRKN 93

Query: 141 HGRLSLPAKKL-LFDFATEEERKLLSEQENK-NKKGMNVMIVDDVLQERMICLKKWKIGS 200
            G LS+   KL   DF TE+E + L E   K  + G+ V +VD    + ++ LKKW   +
Sbjct: 94  QGCLSMHLSKLEKSDFLTEDETRFLDEDFLKAKRDGLKVFLVDPESDKHVVYLKKWNGNT 153

Query: 201 GDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFAMVKLAPC 245
              Y L   WN+ +++   K    I++W FR      + +LCFA+     C
Sbjct: 154 VWKYVLSHGWNNVIDKKIFKVNDVIEIWSFRDG----SGKLCFALSSPTRC 200

[Close]
BLAST of ClCG01G006250 vs. TAIR10
Match: AT2G27410.1 (AT2G27410.1 Domain of unknown function (DUF313) )

HSP 1 Score: 72.8 bits (177), Expect = 3.3e-13
Identity = 52/171 (30.41%), Postives = 80/171 (46.78%), Query Frame = 1 

Query: 76  KRKKPPTPTKKQRKKK--VKQSEYPSIPEMPAAMRDRIV--EMGGYEIRLVIQKQLQDTD 135
           K K+P    K+  KK+  +   E   I   P      ++  E  GY  +L+  +QL  TD
Sbjct: 39  KEKRPINVEKRSHKKRKIICPLEEEPIQTTPPEWLLNVMRREENGYNPKLISTRQLYKTD 98

Query: 136 LNKNHGRLSLPAKKLLF-DFATEEERKLLSEQENK-NKKGMNVMIVDDVLQERMICLKKW 195
           L K   RLS+P K++   DF TE+E +++ E   K    G+ V  VD  L + ++ L+KW
Sbjct: 99  LKKTEARLSVPFKQVKTPDFLTEDETRIIHENAMKIRDNGVPVNFVDPELNKHVLELRKW 158

Query: 196 KIGSGDVYCLMTQWNSFVE--ETGLKSGQHIQLWCFRKNDELEASRLCFAM 239
           K+    +Y  +  W + ++  +T  K      LW FR        +LCFA+
Sbjct: 159 KMKGNWIYVFVKGWKNVLDACKTLFKEDDVYPLWSFRSG----TGKLCFAL 205

[Close]
BLAST of ClCG01G006250 vs. TAIR10
Match: AT2G24670.1 (AT2G24670.1 Domain of unknown function (DUF313) )

HSP 1 Score: 65.9 bits (159), Expect = 4.1e-11
Identity = 53/206 (25.73%), Postives = 104/206 (50.49%), Query Frame = 1 

Query: 47  PLTMLEAAAILIEMANSVSDFEPKKFNSHKRKKPPTPTKKQRK-KKVKQSEYPSIPEM-- 106
           P T++E+ + + +  +S+ +   ++  +     P +P  +QRK KK K+S   S  +   
Sbjct: 50  PSTVMESKSHIHD--HSLRESPTRRSRNRHDLPPMSPPMEQRKSKKAKRSTDASSSKTRE 109

Query: 107 --PAAMRDRIVEMGGYEI----RLVIQKQLQDTDLNKNHGRLSLPAKKLL-FDFATEEER 166
             P  +   +    G ++    + +I K+L  TD++ +  RLS+P  +++  +F   EE+
Sbjct: 110 PTPGWLISLMRSKNGGDVEDNSKKIIDKELFQTDVDPHQSRLSIPVSQIVELEFLNHEEK 169

Query: 167 KLLSEQENK-NKKGMNVMIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLKSG 226
           + + E  N+  K+G++ ++VD  L+E  + L+   +    +Y L+  WN  V +  L+  
Sbjct: 170 RAIEEDANRVRKEGVDAILVDSHLREFPVNLRLRDMRGILLYNLVAGWNQVVTDCLLEEN 229

Query: 227 QHIQLWCFRKNDELEASRLCFAMVKL 242
            +I+LW F  +D      L FA+V L
Sbjct: 230 TNIRLWSFHADD-----TLYFALVPL 248

[Close]
BLAST of ClCG01G006250 vs. NCBI nr
Match: gi|778703844|ref|XP_011655441.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus])

HSP 1 Score: 326.2 bits (835), Expect = 4.7e-86
Identity = 176/268 (65.67%), Postives = 200/268 (74.63%), Query Frame = 1 

Query: 1   MGMGTAVE-GFRMGLDFPDLNEIYIPRRRRGSS-GTGKKEQPKTETKLPLTMLEAAAILI 60
           M M T+V  G R+ L  PDLN +Y+PR+RRGSS G GKKEQ  TET+LPL+M EAA+ILI
Sbjct: 1   MVMETSVRCGLRICLQLPDLNNVYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASILI 60

Query: 61  EMANSVSDFEPKKFN-SHKRKKPPTPT---------------------KKQRKKKVKQSE 120
           ++ANSV D  P+K N + KRK PPT T                     KKQRK  V QSE
Sbjct: 61  QLANSVPDVPPQKINKTRKRKNPPTQTEASTSRTKQQRKKNVASTSRTKKQRKMNVDQSE 120

Query: 121 YPSIPEMPAAMRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEER 180
            PS   MP AMRDRI+EMGGYEI LVIQKQL DTDLNKNHGRLS+  K+L FDFATEEE 
Sbjct: 121 RPS---MPVAMRDRILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEES 180

Query: 181 KLLSEQENKNKKGMNVMIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLKSGQ 240
           KLLSEQENKNK G+NVMI+DDVL+ERM+CLKKWKIGSG VYCLMT+WN  VEE GLKSG+
Sbjct: 181 KLLSEQENKNKMGINVMILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGE 240

Query: 241 HIQLWCFRKNDELEASRLCFAMVKLAPC 245
            IQ+W FRK+DE EA RLC A+VKLA C
Sbjct: 241 EIQVWSFRKDDEDEAHRLCLALVKLATC 265

[Close]
BLAST of ClCG01G006250 vs. NCBI nr
Match: gi|700196319|gb|KGN51496.1| (hypothetical protein Csa_5G570410 [Cucumis sativus])

HSP 1 Score: 318.9 bits (816), Expect = 7.5e-84
Identity = 170/248 (68.55%), Postives = 194/248 (78.23%), Query Frame = 1 

Query: 3   MGTAVE-GFRMGLDFPDLNEIYIPRRRRGSS-GTGKKEQPKTETKLPLTMLEAAAILIEM 62
           M T+V  G R+ L  PDLN +Y+PR+RRGSS G GKKEQ  TET+LPL+M EAA+ILI++
Sbjct: 1   METSVRCGLRICLQLPDLNNVYVPRKRRGSSSGVGKKEQSMTETELPLSMAEAASILIQL 60

Query: 63  ANSVSDFEPKKFN-SHKRKKPPTPT-------KKQRKKKVKQSEYPSIPEMPAAMRDRIV 122
           ANSV D   +K N + KRK PPT T       KKQRK  V QSE PS   MP AMRDRI+
Sbjct: 61  ANSVPDVPLQKINKTRKRKNPPTQTEASTSRTKKQRKMNVDQSERPS---MPVAMRDRIL 120

Query: 123 EMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEERKLLSEQENKNKKGMNV 182
           EMGGYEI LVIQKQL DTDLNKNHGRLS+  K+L FDFATEEE KLLSEQENKNK G+NV
Sbjct: 121 EMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMGINV 180

Query: 183 MIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEAS 241
           M +DDVL+ERM+CLKKWKIGSG VYCLMT+WN  VEE GLKSG+ IQ+W FRK+DE EA 
Sbjct: 181 MTLDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQVWSFRKDDEDEAH 240

[Close]
BLAST of ClCG01G006250 vs. NCBI nr
Match: gi|659072764|ref|XP_008467039.1| (PREDICTED: putative B3 domain-containing protein At2g27410 [Cucumis melo])

HSP 1 Score: 318.2 bits (814), Expect = 1.3e-83
Identity = 169/244 (69.26%), Postives = 196/244 (80.33%), Query Frame = 1 

Query: 6   AVEGFRMGLDFPDLNEIYIPRRRRGSSGTGKKEQPKTETKLPLTMLEAAAILIEMANSVS 65
           AVEGFRM +     N+ Y+P+RRR S     KEQ   +T LP++M EAA +LIEMANSV 
Sbjct: 6   AVEGFRMNVH--SFNQFYVPQRRR-SFRVEIKEQSNPQTHLPISMSEAADVLIEMANSVP 65

Query: 66  DFEPKKFN-SHKRKKPP---TPTKKQR-KKKVKQSEYPSIPEMPAAMRDRIVEMGGYEIR 125
           + EP++ N +HKRK PP   T  KKQR KKKV+QSEYPSIPEMP  MRDRI EMGGYEI 
Sbjct: 66  NVEPQQINKTHKRKNPPRTNTAIKKQRRKKKVEQSEYPSIPEMPTTMRDRIEEMGGYEIN 125

Query: 126 LVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATEEERKLLSEQENKNKKGMNVMIVDDVLQ 185
           LVIQKQL DTDLNKN GRLS+P KKL FDF TEEER LLS+QENKNKKG+NVMI++++++
Sbjct: 126 LVIQKQLTDTDLNKNEGRLSMPKKKLAFDFTTEEERNLLSQQENKNKKGINVMIMNNMVE 185

Query: 186 E-RMICLKKWKIGS--GDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFA 242
           + R ICLKKWKIGS  GDVYCLMTQWN+FVEETGLKSGQHIQLWCFRK+ E E  RLCFA
Sbjct: 186 DIRSICLKKWKIGSGNGDVYCLMTQWNAFVEETGLKSGQHIQLWCFRKDYEFEPPRLCFA 245

[Close]
BLAST of ClCG01G006250 vs. NCBI nr
Match: gi|700196320|gb|KGN51497.1| (hypothetical protein Csa_5G570420 [Cucumis sativus])

HSP 1 Score: 303.1 bits (775), Expect = 4.3e-79
Identity = 166/267 (62.17%), Postives = 194/267 (72.66%), Query Frame = 1 

Query: 1   MGMGTAVEG-FRMGLDFPDLNEIYIPRRRRGSS-GTGKKEQPKTETKLPLTMLEAAAILI 60
           M M T V G  R+      LN IYIPR+RRGSS G GK++Q  TET+LPL+M+EAA+ILI
Sbjct: 1   MTMDTTVHGGLRICHLHSHLNNIYIPRKRRGSSSGAGKEQQYITETELPLSMVEAASILI 60

Query: 61  EMANSVS--DFEPKKFN----------------SHKRKKPPTPT-------KKQRKKKVK 120
           E+ANSV   D + +KFN                +HKRK PP PT       KKQRKK V 
Sbjct: 61  ELANSVPVPDVQRQKFNKTANSVPDVERQKLNKTHKRKNPPIPTEASTSKTKKQRKKNVN 120

Query: 121 QSEYPSIPEMPAAMRDRIVEMGGYEIRLVIQKQLQDTDLNKNHGRLSLPAKKLLFDFATE 180
           + E+P    MP  MRDRI+EMGGYEIRLVIQK+L DTDLNKNHGR S+  K L FDFATE
Sbjct: 121 KREHPP---MPVTMRDRILEMGGYEIRLVIQKELTDTDLNKNHGRFSMNTKLLSFDFATE 180

Query: 181 EERKLLSEQENKNKKGMNVMIVDDVLQERMICLKKWKIGSGDVYCLMTQWNSFVEETGLK 240
           EE KLLSEQENKNKKG+NVMI+DD L+ER++CLKKWKIGSG+VYCLMTQWN  VE+ G K
Sbjct: 181 EESKLLSEQENKNKKGINVMILDDALEERILCLKKWKIGSGEVYCLMTQWNLMVEKRGFK 240

[Close]
BLAST of ClCG01G006250 vs. NCBI nr
Match: gi|659072862|ref|XP_008467133.1| (PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo])

HSP 1 Score: 255.8 bits (652), Expect = 7.8e-65
Identity = 126/173 (72.83%), Postives = 143/173 (82.66%), Query Frame = 1 

Query: 72  FNSHKRKKPPTPTKKQRKKKVKQSEYPSIPEMPAAMRDRIVEMGGYEIRLVIQKQLQDTD 131
           F   K     + TKKQRKK VKQ E+PS   MP AMRDRI+EMGGYEIRLVIQKQL DTD
Sbjct: 18  FLGEKNLASTSRTKKQRKKYVKQIEHPS---MPVAMRDRILEMGGYEIRLVIQKQLTDTD 77

Query: 132 LNKNHGRLSLPAKKLLFDFATEEERKLLSEQENKNKKGMNVMIVDDVLQERMICLKKWKI 191
           LNKNHGRLS+  K+L FDFATEEE KLLSEQENKNK+G+NVM++DDVL+ERM+CLKKWKI
Sbjct: 78  LNKNHGRLSMNTKQLSFDFATEEETKLLSEQENKNKRGINVMMLDDVLEERMLCLKKWKI 137

Query: 192 GSGDVYCLMTQWNSFVEETGLKSGQHIQLWCFRKNDELEASRLCFAMVKLAPC 245
           GSG+VYCLMT+WN  VEE G K G+ IQ+W FRK+DE EA RLCFA+VKLA C
Sbjct: 138 GSGEVYCLMTRWNLMVEERGFKGGEEIQVWSFRKDDEYEAHRLCFALVKLATC 187

The following BLAST results are available for this feature:
BLAST of ClCG01G006250 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y1592_ARATH4.1e-1333.13B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana GN=At1g05920 PE=2... [more]
Y3485_ARATH9.1e-1332.77Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana GN=At3g2... [more]
Y2142_ARATH3.5e-1229.82B3 domain-containing protein At2g31420 OS=Arabidopsis thaliana GN=At2g31420 PE=3... [more]
Y2741_ARATH5.9e-1230.41Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana GN=At2g2... [more]
Y2467_ARATH7.2e-1025.73B3 domain-containing protein At2g24670 OS=Arabidopsis thaliana GN=At2g24670 PE=2... [more]
BLAST of ClCG01G006250 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KP87_CUCSA3.3e-8665.67Uncharacterized protein OS=Cucumis sativus GN=Csa_5G544060 PE=4 SV=1[more]
A0A0A0KUX9_CUCSA5.3e-8468.55Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570410 PE=4 SV=1[more]
A0A0A0KSY8_CUCSA3.0e-7962.17Uncharacterized protein OS=Cucumis sativus GN=Csa_5G570420 PE=4 SV=1[more]
A0A0A0LRL4_CUCSA2.2e-5351.72Uncharacterized protein OS=Cucumis sativus GN=Csa_2G365090 PE=4 SV=1[more]
A0A0A0KPD7_CUCSA2.4e-5276.69Uncharacterized protein OS=Cucumis sativus GN=Csa_5G550750 PE=4 SV=1[more]
BLAST of ClCG01G006250 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G05920.12.3e-1433.13 Domain of unknown function (DUF313) [more]
AT3G24850.15.1e-1432.77 Domain of unknown function (DUF313) [more]
AT2G31420.11.9e-1329.82 Domain of unknown function (DUF313) [more]
AT2G27410.13.3e-1330.41 Domain of unknown function (DUF313) [more]
AT2G24670.14.1e-1125.73 Domain of unknown function (DUF313) [more]
BLAST of ClCG01G006250 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778703844|ref|XP_011655441.1|4.7e-8665.67PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis sativus][more]
gi|700196319|gb|KGN51496.1|7.5e-8468.55hypothetical protein Csa_5G570410 [Cucumis sativus][more]
gi|659072764|ref|XP_008467039.1|1.3e-8369.26PREDICTED: putative B3 domain-containing protein At2g27410 [Cucumis melo][more]
gi|700196320|gb|KGN51497.1|4.3e-7962.17hypothetical protein Csa_5G570420 [Cucumis sativus][more]
gi|659072862|ref|XP_008467133.1|7.8e-6572.83PREDICTED: B3 domain-containing protein At2g31420-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005508DUF313
IPR015300DNA-bd_pseudobarrel_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G006250.1ClCG01G006250.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005508B3 domain-containing proteinPFAMPF03754DUF313coord: 102..208
score: 3.1
IPR015300DNA-binding pseudobarrel domainGENE3DG3DSA:2.40.330.10coord: 120..227
score: 2.
IPR015300DNA-binding pseudobarrel domainunknownSSF101936DNA-binding pseudobarrel domaincoord: 122..226
score: 3.53
NoneNo IPR availablePANTHERPTHR31541FAMILY NOT NAMEDcoord: 68..243
score: 1.2
NoneNo IPR availablePANTHERPTHR31541:SF22SUBFAMILY NOT NAMEDcoord: 68..243
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG01G006250Cucurbita moschata (Rifu)cmowcgB245
ClCG01G006250Cucurbita moschata (Rifu)cmowcgB636
ClCG01G006250Cucurbita moschata (Rifu)cmowcgB640
ClCG01G006250Wild cucumber (PI 183967)cpiwcgB388
ClCG01G006250Cucumber (Chinese Long) v2cuwcgB372
ClCG01G006250Melon (DHL92) v3.5.1mewcgB019
ClCG01G006250Watermelon (97103) v1wcgwmB143
ClCG01G006250Cucurbita pepo (Zucchini)cpewcgB169
ClCG01G006250Cucurbita pepo (Zucchini)cpewcgB370
ClCG01G006250Cucurbita pepo (Zucchini)cpewcgB371
ClCG01G006250Cucurbita pepo (Zucchini)cpewcgB373
ClCG01G006250Bottle gourd (USVL1VR-Ls)lsiwcgB008
ClCG01G006250Cucumber (Gy14) v2cgybwcgB336
ClCG01G006250Cucumber (Gy14) v2cgybwcgB340
ClCG01G006250Melon (DHL92) v3.6.1medwcgB017
ClCG01G006250Silver-seed gourdcarwcgB0170
ClCG01G006250Silver-seed gourdcarwcgB0183
ClCG01G006250Silver-seed gourdcarwcgB0419
ClCG01G006250Silver-seed gourdcarwcgB0857
ClCG01G006250Cucumber (Chinese Long) v3cucwcgB389
ClCG01G006250Cucumber (Chinese Long) v3cucwcgB394
ClCG01G006250Watermelon (97103) v2wcgwmbB089
ClCG01G006250Watermelon (97103) v2wcgwmbB120
ClCG01G006250Wax gourdwcgwgoB191
ClCG01G006250Cucumber (Gy14) v1cgywcgB484
ClCG01G006250Cucurbita moschata (Rifu)cmowcgB638
ClCG01G006250Cucurbita maxima (Rimu)cmawcgB257
ClCG01G006250Cucurbita maxima (Rimu)cmawcgB634
ClCG01G006250Cucurbita maxima (Rimu)cmawcgB636
ClCG01G006250Cucurbita maxima (Rimu)cmawcgB638