ClCG01G004310 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTCGGACACCGCCGCCGCCGTGGACGACGGCCGGAACATGACAAACAGACTCCAACTCCAGGCGGCGCATCCTCTCCACCACCACGAAAACCACCCTCTAGCCTTCATAAACTCCCTCCACACTCTCCACCGCCACTTCATGATCTCTTTACAAGACTTCTCCGATCCCTCCATCACCGGCCTCCTCTTCCGCTCCACCGGCTTCTTCCACTGCGCCGCCTGCTCCACCGCCACCCCTGGAGGCCCCTCCTTCCACTGCCTTGCCTGCCCTTTCTCCCTCTCCGCCGCCTGTGCGGCCCTTCCCCTCATCACCGTCGACGACCACCCCCACCCCCTTCTCCTCCTGAACAGAAACTCCGATCACAAGCATTTGATTTGCGCTGTGTGTGACGAAGGAATCAGTTTCCCCAGTTTCGTCCGATGTGTTCATTGCGATGCCTTTCTTCATGTTCAATGTGCTCTTCCGCCCGTCATTAAAGCTCATAATCACCATCTTCATCAGATTGTGCTTTCCAGCTCTGAGATTGTTGCTGCTAATAATAATTATGATAATTTGTGTAGCGTTTGTGGAGAAGAAAGAGATGGAGTGTCATGGGTTTATTGCTGTGAGATTTGTCCCTTTCTTGCTCATGTTGGTTGTGTCATCTATGATCATCAGGTGCGCCATCTTTGTGTTTTTTTTCCTTTTTCAGTTTGGCGGAAGAACCGAAGTTGTGAAATAAGGTGAGTTGGTTAGTTGGGCCTCGAGGAGTTAGTAAAGAATCAAAGTGATTTATTTCCGTTGTGGAACTACAAACTCTTTAGTCAAATAAAGGGGGAAGTTAATAACTTCAATTCAATTCTTAGTAACTCCAACTCTTAATACCAAACATGCACTTCGAATTATTTACAAGTTTAGCTTTAAAAGACTTTTAATATTCGTAAAAGCCTCATTTAGTTATAATTTCATCTAAAAAAAATTGTGGATGGTTTTTATATTTCTTTAAAAAATGTTTGAATTTTGAAGCAAATTTTAAAAATGAATTTATAAGAGTAGTTTTGAAAATTTAACTTGAACTTTGAAAGTACTTTAAAATAGATTAAAAAAAAAAAAGTTTCAACTATAAAACGAAGTAAATAAATGTTTGGTAAATTGCAACTTATATATTGAAGATATTATAGAATATGAGTAAAATAGGAATTTTAATAGTTAGTCGGAAGAATATGAGATTTCTTAGAAAGTTAATCTCAAAAGCTATGCAACTTTAAACTATGCAAAATCAAATTCTTAATGTACCATTAGTTTTTTTTTTTTCGAAAAAAAAGTTAAAAATAAAAAACTAAGGCCTTAAATAACCATATTGGTTTTTAGTTTTTGATTTATGAAAATTATGCTGCCAAATCTCAAAAGAAAGAAAAGAAAAAGCATTTTTAAAATTTATGACCCTATTTGATTATCATGTAGTTTGAAATTTCTTGAAAATTGTGTTTGTGTTAAAGCGTTGATATAATTAAATTTATAATAATTCATCAGCTTAAGTCTTTAAGTCAATCGATAATTAACATGGTATCATAGATTATGTTCAAACCTTTTAATGTCATTTTCTGTTGGATCTCCTACAAGATTTCAAGTCAACAAGTAACGAGAGTGTTAAAGTGTTAATATAATCAAATTTATTAGAACCCATCAGCTTAAACTTTTGTAAGTCAATAAGGGATTTAACAATTTATTTTATCCAAATTACTTATTTATCGTAGTTTTTATCTTTGTTGTGTGTAAACATTTGAATTTGTAGTTAAATTACATTTGAGTATGTTATTAAATTGCACAAGCAATAACAAGCTCTTAAAAACCAAGATCCTTTGTTTTTAGTATTCAAATGACTTTTTTGTGTTTTTAAAACACAAACAGAACAAAGAGAATCAATAAGTTCAAATAGAATTTATAAGCTCAATTTTCAAAGACAAAAAATCAAATTGTTATTCAACGGTTCCAAATTATGTTTCATAAATTTAGATAATAATACAATATGATCTCTCATGCTCTGTTTTGAATCATTATCACACACTATAATTTTTCCCTACAGAACCCAAGTGAAAAAGAAGCAGAAGAAGGATCCATAACAACCCAACTTTGTAAATTGGCATTGGATAATGATGAACATAATTTGGATGAAGAAGGAAGCCATGAAAGCATACTAAAGCCTGGAGTAACCCTACAGCAGATCCTCGATTCTTTCTCCGAATCCGATGATGCCGAATATCAAACCCTTATCACTGCAATGATGAAGGCTGCCGGTGGTGATAGTGACGACGATGACGAACCCGAAAATGGAACCAATTCCGAAGACAAACATTTGTACCATTTTTGGAATCTTGAGAAACCCCTTTATGATCTCATAGAAAAACTCGAGCTCGAAGATGTTGATCCTTTTGAAGGTTTTGATAGAAACTCTCCAACGGTTCTTGTCGGCAATCGATACTTGGTCGTGGAGAAACTAGCAAGAACTTTCACTAAAATTTTTATGAAACATGGAGATATCTCAGGTGAGATTTTAAAATGTTATTAAAATGTCAATGTCGATGGAGGTTTATAAAAAATAAAATCACTCAAAATTTAGAAAAATTCATTTTTTTTACAACTTGTTTCAAGGAGTGCTATTATTTTTATTAATTGATTAAAAAAAAAAAATCCAATCTTATTTCAACTTTTATTCATATTGTGGTAATTCTACTTTCAACTTATATCTATATTAGTAATTTTTTTTATTTGTAATTTTTTTTTTTCATCACAATTGCAACATAAAACAAAGCTCTTATAGAAATTTTGTTAAGATATTTTACAAAAGCTGACATTTTGTAAAAGGTAGAGATGAAAAAGTAGAATTTTCAAATCTTAATATTTAGTTTAAAAATTAGAAGCATGGAGGTAAGAAATATAGATATGACAATGAATAAATGTGACATGTCAGAGAGGTCAAATATGGGCATGAAAGTGAAGACGATCGTTTGGAATTTGTTCTGCAATGTGATCGACGACATGTGGAGAATGGAGTTGGAGAAGATGAGGGGAGAGGATCTGGTTTCATGGATGATTGGGATTAGAACAATTGAACTGGCTGGTTTTGATGTGGAGTTTGCATTTGAAGGTTGGAAGAAGATAGCAATGGCTTTCTTTGGTGTTAGAGCAAAAGAAGTGGCTGAAGAGTTGGTTGAAGAAATGGAAGAGAAGATTAAACAACAGAGACTCAAATTGGAAAAGCTTTGTGAAGAACAAGAGAAGCTTTTGAGTTTAAGAGAAAAGTGTGTCATGGAAGCTCTGGCTATGGACAGCAAATTTGTAGGAGATGGATTGATCTAA ATGAGTTCGGACACCGCCGCCGCCGTGGACGACGGCCGGAACATGACAAACAGACTCCAACTCCAGGCGGCGCATCCTCTCCACCACCACGAAAACCACCCTCTAGCCTTCATAAACTCCCTCCACACTCTCCACCGCCACTTCATGATCTCTTTACAAGACTTCTCCGATCCCTCCATCACCGGCCTCCTCTTCCGCTCCACCGGCTTCTTCCACTGCGCCGCCTGCTCCACCGCCACCCCTGGAGGCCCCTCCTTCCACTGCCTTGCCTGCCCTTTCTCCCTCTCCGCCGCCTGTGCGGCCCTTCCCCTCATCACCGTCGACGACCACCCCCACCCCCTTCTCCTCCTGAACAGAAACTCCGATCACAAGCATTTGATTTGCGCTGTGTGTGACGAAGGAATCAGTTTCCCCAGTTTCGTCCGATGTGTTCATTGCGATGCCTTTCTTCATGTTCAATGTGCTCTTCCGCCCGTCATTAAAGCTCATAATCACCATCTTCATCAGATTGTGCTTTCCAGCTCTGAGATTGTTGCTGCTAATAATAATTATGATAATTTGTGTAGCGTTTGTGGAGAAGAAAGAGATGGAGTGTCATGGGTTTATTGCTGTGAGATTTGTCCCTTTCTTGCTCATGTTGGTTGTGTCATCTATGATCATCAGAACCCAAGTGAAAAAGAAGCAGAAGAAGGATCCATAACAACCCAACTTTGTAAATTGGCATTGGATAATGATGAACATAATTTGGATGAAGAAGGAAGCCATGAAAGCATACTAAAGCCTGGAGTAACCCTACAGCAGATCCTCGATTCTTTCTCCGAATCCGATGATGCCGAATATCAAACCCTTATCACTGCAATGATGAAGGCTGCCGGTGGTGATAGTGACGACGATGACGAACCCGAAAATGGAACCAATTCCGAAGACAAACATTTGTACCATTTTTGGAATCTTGAGAAACCCCTTTATGATCTCATAGAAAAACTCGAGCTCGAAGATGTTGATCCTTTTGAAGGTTTTGATAGAAACTCTCCAACGGTTCTTGTCGGCAATCGATACTTGGTCGTGGAGAAACTAGCAAGAACTTTCACTAAAATTTTTATGAAACATGGAGATATCTCAGAGAGGTCAAATATGGGCATGAAAGTGAAGACGATCGTTTGGAATTTGTTCTGCAATGTGATCGACGACATGTGGAGAATGGAGTTGGAGAAGATGAGGGGAGAGGATCTGGTTTCATGGATGATTGGGATTAGAACAATTGAACTGGCTGGTTTTGATGTGGAGTTTGCATTTGAAGGTTGGAAGAAGATAGCAATGGCTTTCTTTGGTGTTAGAGCAAAAGAAGTGGCTGAAGAGTTGGTTGAAGAAATGGAAGAGAAGATTAAACAACAGAGACTCAAATTGGAAAAGCTTTGTGAAGAACAAGAGAAGCTTTTGAGTTTAAGAGAAAAGTGTGTCATGGAAGCTCTGGCTATGGACAGCAAATTTGTAGGAGATGGATTGATCTAA ATGAGTTCGGACACCGCCGCCGCCGTGGACGACGGCCGGAACATGACAAACAGACTCCAACTCCAGGCGGCGCATCCTCTCCACCACCACGAAAACCACCCTCTAGCCTTCATAAACTCCCTCCACACTCTCCACCGCCACTTCATGATCTCTTTACAAGACTTCTCCGATCCCTCCATCACCGGCCTCCTCTTCCGCTCCACCGGCTTCTTCCACTGCGCCGCCTGCTCCACCGCCACCCCTGGAGGCCCCTCCTTCCACTGCCTTGCCTGCCCTTTCTCCCTCTCCGCCGCCTGTGCGGCCCTTCCCCTCATCACCGTCGACGACCACCCCCACCCCCTTCTCCTCCTGAACAGAAACTCCGATCACAAGCATTTGATTTGCGCTGTGTGTGACGAAGGAATCAGTTTCCCCAGTTTCGTCCGATGTGTTCATTGCGATGCCTTTCTTCATGTTCAATGTGCTCTTCCGCCCGTCATTAAAGCTCATAATCACCATCTTCATCAGATTGTGCTTTCCAGCTCTGAGATTGTTGCTGCTAATAATAATTATGATAATTTGTGTAGCGTTTGTGGAGAAGAAAGAGATGGAGTGTCATGGGTTTATTGCTGTGAGATTTGTCCCTTTCTTGCTCATGTTGGTTGTGTCATCTATGATCATCAGAACCCAAGTGAAAAAGAAGCAGAAGAAGGATCCATAACAACCCAACTTTGTAAATTGGCATTGGATAATGATGAACATAATTTGGATGAAGAAGGAAGCCATGAAAGCATACTAAAGCCTGGAGTAACCCTACAGCAGATCCTCGATTCTTTCTCCGAATCCGATGATGCCGAATATCAAACCCTTATCACTGCAATGATGAAGGCTGCCGGTGGTGATAGTGACGACGATGACGAACCCGAAAATGGAACCAATTCCGAAGACAAACATTTGTACCATTTTTGGAATCTTGAGAAACCCCTTTATGATCTCATAGAAAAACTCGAGCTCGAAGATGTTGATCCTTTTGAAGGTTTTGATAGAAACTCTCCAACGGTTCTTGTCGGCAATCGATACTTGGTCGTGGAGAAACTAGCAAGAACTTTCACTAAAATTTTTATGAAACATGGAGATATCTCAGAGAGGTCAAATATGGGCATGAAAGTGAAGACGATCGTTTGGAATTTGTTCTGCAATGTGATCGACGACATGTGGAGAATGGAGTTGGAGAAGATGAGGGGAGAGGATCTGGTTTCATGGATGATTGGGATTAGAACAATTGAACTGGCTGGTTTTGATGTGGAGTTTGCATTTGAAGGTTGGAAGAAGATAGCAATGGCTTTCTTTGGTGTTAGAGCAAAAGAAGTGGCTGAAGAGTTGGTTGAAGAAATGGAAGAGAAGATTAAACAACAGAGACTCAAATTGGAAAAGCTTTGTGAAGAACAAGAGAAGCTTTTGAGTTTAAGAGAAAAGTGTGTCATGGAAGCTCTGGCTATGGACAGCAAATTTGTAGGAGATGGATTGATCTAA MSSDTAAAVDDGRNMTNRLQLQAAHPLHHHENHPLAFINSLHTLHRHFMISLQDFSDPSITGLLFRSTGFFHCAACSTATPGGPSFHCLACPFSLSAACAALPLITVDDHPHPLLLLNRNSDHKHLICAVCDEGISFPSFVRCVHCDAFLHVQCALPPVIKAHNHHLHQIVLSSSEIVAANNNYDNLCSVCGEERDGVSWVYCCEICPFLAHVGCVIYDHQNPSEKEAEEGSITTQLCKLALDNDEHNLDEEGSHESILKPGVTLQQILDSFSESDDAEYQTLITAMMKAAGGDSDDDDEPENGTNSEDKHLYHFWNLEKPLYDLIEKLELEDVDPFEGFDRNSPTVLVGNRYLVVEKLARTFTKIFMKHGDISERSNMGMKVKTIVWNLFCNVIDDMWRMELEKMRGEDLVSWMIGIRTIELAGFDVEFAFEGWKKIAMAFFGVRAKEVAEELVEEMEEKIKQQRLKLEKLCEEQEKLLSLREKCVMEALAMDSKFVGDGLI
BLAST of ClCG01G004310 vs. TrEMBL
Match: A0A0A0KRD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G165270 PE=4 SV=1) HSP 1 Score: 758.1 bits (1956), Expect = 7.0e-216 Identity = 370/491 (75.36%), Postives = 417/491 (84.93%), Query Frame = 1
BLAST of ClCG01G004310 vs. TrEMBL
Match: A0A067L719_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03435 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 3.2e-27 Identity = 114/449 (25.39%), Postives = 197/449 (43.88%), Query Frame = 1
BLAST of ClCG01G004310 vs. TrEMBL
Match: A0A059C0H4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00393 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 3.2e-19 Identity = 115/450 (25.56%), Postives = 184/450 (40.89%), Query Frame = 1
BLAST of ClCG01G004310 vs. TrEMBL
Match: A0A067F1F0_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0459182mg PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 1.0e-17 Identity = 111/465 (23.87%), Postives = 193/465 (41.51%), Query Frame = 1
BLAST of ClCG01G004310 vs. TrEMBL
Match: V4UP81_9ROSI (Uncharacterized protein (Fragment) OS=Citrus clementina GN=CICLE_v10027597mg PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.8e-17 Identity = 111/465 (23.87%), Postives = 192/465 (41.29%), Query Frame = 1
BLAST of ClCG01G004310 vs. TAIR10
Match: AT2G23100.1 (AT2G23100.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 81.6 bits (200), Expect = 1.5e-15 Identity = 57/202 (28.22%), Postives = 89/202 (44.06%), Query Frame = 1
BLAST of ClCG01G004310 vs. TAIR10
Match: AT1G55390.1 (AT1G55390.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 79.0 bits (193), Expect = 9.6e-15 Identity = 53/179 (29.61%), Postives = 79/179 (44.13%), Query Frame = 1
BLAST of ClCG01G004310 vs. TAIR10
Match: AT1G55380.1 (AT1G55380.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 66.6 bits (161), Expect = 4.9e-11 Identity = 49/183 (26.78%), Postives = 70/183 (38.25%), Query Frame = 1
BLAST of ClCG01G004310 vs. TAIR10
Match: AT1G55420.1 (AT1G55420.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 63.9 bits (154), Expect = 3.2e-10 Identity = 54/199 (27.14%), Postives = 73/199 (36.68%), Query Frame = 1
BLAST of ClCG01G004310 vs. TAIR10
Match: AT2G13950.1 (AT2G13950.1 Cysteine/Histidine-rich C1 domain family protein) HSP 1 Score: 57.8 bits (138), Expect = 2.3e-08 Identity = 43/160 (26.88%), Postives = 64/160 (40.00%), Query Frame = 1
BLAST of ClCG01G004310 vs. NCBI nr
Match: gi|659073395|ref|XP_008437037.1| (PREDICTED: uncharacterized protein LOC103482586 [Cucumis melo]) HSP 1 Score: 780.8 bits (2015), Expect = 1.4e-222 Identity = 377/490 (76.94%), Postives = 420/490 (85.71%), Query Frame = 1
BLAST of ClCG01G004310 vs. NCBI nr
Match: gi|778700165|ref|XP_011654823.1| (PREDICTED: uncharacterized protein LOC105435447 [Cucumis sativus]) HSP 1 Score: 758.1 bits (1956), Expect = 1.0e-215 Identity = 370/491 (75.36%), Postives = 417/491 (84.93%), Query Frame = 1
BLAST of ClCG01G004310 vs. NCBI nr
Match: gi|802582167|ref|XP_012070036.1| (PREDICTED: uncharacterized protein LOC105632300 isoform X2 [Jatropha curcas]) HSP 1 Score: 131.3 bits (329), Expect = 4.6e-27 Identity = 114/449 (25.39%), Postives = 197/449 (43.88%), Query Frame = 1
BLAST of ClCG01G004310 vs. NCBI nr
Match: gi|802582140|ref|XP_012070035.1| (PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]) HSP 1 Score: 131.3 bits (329), Expect = 4.6e-27 Identity = 114/449 (25.39%), Postives = 197/449 (43.88%), Query Frame = 1
BLAST of ClCG01G004310 vs. NCBI nr
Match: gi|802582140|ref|XP_012070035.1| (PREDICTED: uncharacterized protein LOC105632300 isoform X1 [Jatropha curcas]) HSP 1 Score: 63.9 bits (154), Expect = 9.0e-07 Identity = 44/169 (26.04%), Postives = 74/169 (43.79%), Query Frame = 1
HSP 2 Score: 110.2 bits (274), Expect = 1.1e-20 Identity = 111/487 (22.79%), Postives = 198/487 (40.66%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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