ClCG01G004060 (gene) Watermelon (Charleston Gray)

NameClCG01G004060
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
DescriptionPentatricopeptide repeat-containing family protein
LocationCG_Chr01 : 4394172 .. 4395911 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAAGGAAAAAGCCATTATCACTCTCTTGCAAGGCTGCAACAACCTCAACAAGCTTCGCAAAATCCACGCACATGTTATTGTAAGCGGCCTCCGCGATCATGTCGCCATTGGCAACAAGCTTTTGAACTTCTGTGCCATCTCTGTTTCAGGTTCCCTTGCTTATGCCCAGCTTCTCTTCCATCAAATGGCGTGCCCACAAACCGAAGCCTGGAACTCCATCATCAGAGGTTTTGCCCAGAGCTCATCTCCCATTGAGGCTATTGTTTTCTACAATCGAATGATTTCGGCCTCTTTTTCTTCCCCTGACACTTTCACTTTCTCATTTGTGCTCAAAGCCTGTGAAAGAATCAAGGCTGAGCGTAAGTGTAAAGAAGTTCATGGCTCTGTAATCCGTTGCGGTTATGATGGGGATGTGATTGTCTGCACCAATCTTGTCAAATGCTATTCGGTGATGGGGTCCGTTTGTAGTGCCCAACAGGTGTTTGACGAAATGCCTGCAAGAGACTTGGTGGCTTGGAATGCTATGATTTCCTGCTTTTCTCAACAGGGTTTGCACCTGGAGTCACTGGAGACATACAATCAGATGAGAAGTGAAAATGTGGATGTAGATGGTTTTACACTCGTTGGGTTGATTTCGTCTTGTGCCCATCTTGGAGCTTTGAATATTGGGGTTCAGATGCATAGATTTGCTCGTGAAAAGGGTCTTGTGCAGAGTCTTTATGTTGGAAATGCGTTGATAGATATGTATGCTAAATGTGGCAGTTTAGATCAGGCCATTCTTATCTTTGATAGAATGCAGAAGAAGGACATTTTCACTTGGAACTCGATGATTGTTGGGTATGGAGTTCATGGTCGAGGTAGTGAAGCTATATATTGCTTTCAACAGATGTTAGAAGCAAGAATGCAACCGAACTCTATCACATTTTTGGGTTTACTTTGTGGATGTAGTCATCAAGGCTTGGTTCAAGAAGGTGTTAAATACTTCCATTTGATGAGCTCTGAGTTTAGGCTAAGACCTGAGGTTAAACACTATGGATGCCTTGTGGATTTATATGGTCGAGCTGGGAAGCTTGAGAAGGCACTTGAAATTGTATCAAATTCATCACAGAATGATCCAGTTTTGTGGCGAATCTTACTTGGCTCTTGCAAGATTCACAAAAATGTGACAATAGGAGAAATTGCCATGAACAGTCTGTGTGAGCTTGGAGCTACAAATGCAGGGGATTGTATATTGTTGGCTACAATCTATGCGGGAAAAAATGATACAGCTGGTGTTGCAAGAATGAGAAAAATGATAAAGAGGCAAGGGATAAAGACTACCCCAGGTTGGAGTTGGATTGAAATTGAGGATCAAGTTCATAAATTTGTGGTTGATGACAAGTCCCATCGTTATTCCATTGAAGTTTATGAGAAGTTGAGGGAAGTTATTCATCAAGCTTCCTTGTTTGGATATGTAGGAGATGAGTCTATTTCATCACTGGATGTGCTTTCTACCACAGAGACCTTAAAGACTTCATGTACATATCATAGTGAGAAACTTGCAATTGCATTTGGATTGGCAAGAATTTCAGATGGGACACAGATACGCATTGTTAAAAACCTTAGAGTTTGTAGAGATTGTCATTCATTCATAAAAGCTGTCTCGGCGGCATTCAACCGAGAAATAATTGTTAGAGATCGGGTTAGATTCCACCATTTCAATGGTGGTCAATGTTCCTGCAATGACTACTGGTGA

mRNA sequence

ATGTCGAAGGAAAAAGCCATTATCACTCTCTTGCAAGGCTGCAACAACCTCAACAAGCTTCGCAAAATCCACGCACATGTTATTGTAAGCGGCCTCCGCGATCATGTCGCCATTGGCAACAAGCTTTTGAACTTCTGTGCCATCTCTGTTTCAGGTTCCCTTGCTTATGCCCAGCTTCTCTTCCATCAAATGGCGTGCCCACAAACCGAAGCCTGGAACTCCATCATCAGAGGTTTTGCCCAGAGCTCATCTCCCATTGAGGCTATTGTTTTCTACAATCGAATGATTTCGGCCTCTTTTTCTTCCCCTGACACTTTCACTTTCTCATTTGTGCTCAAAGCCTGTGAAAGAATCAAGGCTGAGCGTAAGTGTAAAGAAGTTCATGGCTCTGTAATCCGTTGCGGTTATGATGGGGATGTGATTGTCTGCACCAATCTTGTCAAATGCTATTCGGTGATGGGGTCCGTTTGTAGTGCCCAACAGGTGTTTGACGAAATGCCTGCAAGAGACTTGGTGGCTTGGAATGCTATGATTTCCTGCTTTTCTCAACAGGGTTTGCACCTGGAGTCACTGGAGACATACAATCAGATGAGAAGTGAAAATGTGGATGTAGATGGTTTTACACTCGTTGGGTTGATTTCGTCTTGTGCCCATCTTGGAGCTTTGAATATTGGGGTTCAGATGCATAGATTTGCTCGTGAAAAGGGTCTTGTGCAGAGTCTTTATGTTGGAAATGCGTTGATAGATATGTATGCTAAATGTGGCAGTTTAGATCAGGCCATTCTTATCTTTGATAGAATGCAGAAGAAGGACATTTTCACTTGGAACTCGATGATTGTTGGGTATGGAGTTCATGGTCGAGGTAGTGAAGCTATATATTGCTTTCAACAGATGTTAGAAGCAAGAATGCAACCGAACTCTATCACATTTTTGGGTTTACTTTGTGGATGTAGTCATCAAGGCTTGGTTCAAGAAGGTGTTAAATACTTCCATTTGATGAGCTCTGAGTTTAGGCTAAGACCTGAGGTTAAACACTATGGATGCCTTGTGGATTTATATGGTCGAGCTGGGAAGCTTGAGAAGGCACTTGAAATTGTATCAAATTCATCACAGAATGATCCAGTTTTGTGGCGAATCTTACTTGGCTCTTGCAAGATTCACAAAAATGTGACAATAGGAGAAATTGCCATGAACAGTCTGTGTGAGCTTGGAGCTACAAATGCAGGGGATTGTATATTGTTGGCTACAATCTATGCGGGAAAAAATGATACAGCTGGTGTTGCAAGAATGAGAAAAATGATAAAGAGGCAAGGGATAAAGACTACCCCAGGTTGGAGTTGGATTGAAATTGAGGATCAAGTTCATAAATTTGTGGTTGATGACAAGTCCCATCGTTATTCCATTGAAGTTTATGAGAAGTTGAGGGAAGTTATTCATCAAGCTTCCTTGTTTGGATATGTAGGAGATGAGTCTATTTCATCACTGGATGTGCTTTCTACCACAGAGACCTTAAAGACTTCATGTACATATCATAGTGAGAAACTTGCAATTGCATTTGGATTGGCAAGAATTTCAGATGGGACACAGATACGCATTGTTAAAAACCTTAGAGTTTGTAGAGATTGTCATTCATTCATAAAAGCTGTCTCGGCGGCATTCAACCGAGAAATAATTGTTAGAGATCGGGTTAGATTCCACCATTTCAATGGTGGTCAATGTTCCTGCAATGACTACTGGTGA

Coding sequence (CDS)

ATGTCGAAGGAAAAAGCCATTATCACTCTCTTGCAAGGCTGCAACAACCTCAACAAGCTTCGCAAAATCCACGCACATGTTATTGTAAGCGGCCTCCGCGATCATGTCGCCATTGGCAACAAGCTTTTGAACTTCTGTGCCATCTCTGTTTCAGGTTCCCTTGCTTATGCCCAGCTTCTCTTCCATCAAATGGCGTGCCCACAAACCGAAGCCTGGAACTCCATCATCAGAGGTTTTGCCCAGAGCTCATCTCCCATTGAGGCTATTGTTTTCTACAATCGAATGATTTCGGCCTCTTTTTCTTCCCCTGACACTTTCACTTTCTCATTTGTGCTCAAAGCCTGTGAAAGAATCAAGGCTGAGCGTAAGTGTAAAGAAGTTCATGGCTCTGTAATCCGTTGCGGTTATGATGGGGATGTGATTGTCTGCACCAATCTTGTCAAATGCTATTCGGTGATGGGGTCCGTTTGTAGTGCCCAACAGGTGTTTGACGAAATGCCTGCAAGAGACTTGGTGGCTTGGAATGCTATGATTTCCTGCTTTTCTCAACAGGGTTTGCACCTGGAGTCACTGGAGACATACAATCAGATGAGAAGTGAAAATGTGGATGTAGATGGTTTTACACTCGTTGGGTTGATTTCGTCTTGTGCCCATCTTGGAGCTTTGAATATTGGGGTTCAGATGCATAGATTTGCTCGTGAAAAGGGTCTTGTGCAGAGTCTTTATGTTGGAAATGCGTTGATAGATATGTATGCTAAATGTGGCAGTTTAGATCAGGCCATTCTTATCTTTGATAGAATGCAGAAGAAGGACATTTTCACTTGGAACTCGATGATTGTTGGGTATGGAGTTCATGGTCGAGGTAGTGAAGCTATATATTGCTTTCAACAGATGTTAGAAGCAAGAATGCAACCGAACTCTATCACATTTTTGGGTTTACTTTGTGGATGTAGTCATCAAGGCTTGGTTCAAGAAGGTGTTAAATACTTCCATTTGATGAGCTCTGAGTTTAGGCTAAGACCTGAGGTTAAACACTATGGATGCCTTGTGGATTTATATGGTCGAGCTGGGAAGCTTGAGAAGGCACTTGAAATTGTATCAAATTCATCACAGAATGATCCAGTTTTGTGGCGAATCTTACTTGGCTCTTGCAAGATTCACAAAAATGTGACAATAGGAGAAATTGCCATGAACAGTCTGTGTGAGCTTGGAGCTACAAATGCAGGGGATTGTATATTGTTGGCTACAATCTATGCGGGAAAAAATGATACAGCTGGTGTTGCAAGAATGAGAAAAATGATAAAGAGGCAAGGGATAAAGACTACCCCAGGTTGGAGTTGGATTGAAATTGAGGATCAAGTTCATAAATTTGTGGTTGATGACAAGTCCCATCGTTATTCCATTGAAGTTTATGAGAAGTTGAGGGAAGTTATTCATCAAGCTTCCTTGTTTGGATATGTAGGAGATGAGTCTATTTCATCACTGGATGTGCTTTCTACCACAGAGACCTTAAAGACTTCATGTACATATCATAGTGAGAAACTTGCAATTGCATTTGGATTGGCAAGAATTTCAGATGGGACACAGATACGCATTGTTAAAAACCTTAGAGTTTGTAGAGATTGTCATTCATTCATAAAAGCTGTCTCGGCGGCATTCAACCGAGAAATAATTGTTAGAGATCGGGTTAGATTCCACCATTTCAATGGTGGTCAATGTTCCTGCAATGACTACTGGTGA

Protein sequence

MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW
BLAST of ClCG01G004060 vs. Swiss-Prot
Match: PP284_ARATH (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1)

HSP 1 Score: 709.5 bits (1830), Expect = 2.9e-203
Identity = 347/579 (59.93%), Postives = 439/579 (75.82%), Query Frame = 1

Query: 3   KEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF- 62
           K + I+ +LQGCN++ KLRKIH+HVI++GL+ H +I N LL FCA+SV+GSL++AQLLF 
Sbjct: 4   KARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFD 63

Query: 63  HQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAE 122
           H  + P T  WN +IRGF+ SSSP+ +I+FYNRM+ +S S PD FTF+F LK+CERIK+ 
Sbjct: 64  HFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSI 123

Query: 123 RKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCF 182
            KC E+HGSVIR G+  D IV T+LV+CYS  GSV  A +VFDEMP RDLV+WN MI CF
Sbjct: 124 PKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCF 183

Query: 183 SQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSL 242
           S  GLH ++L  Y +M +E V  D +TLV L+SSCAH+ ALN+GV +HR A +      +
Sbjct: 184 SHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCV 243

Query: 243 YVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEA 302
           +V NALIDMYAKCGSL+ AI +F+ M+K+D+ TWNSMI+GYGVHG G EAI  F++M+ +
Sbjct: 244 FVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS 303

Query: 303 RMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEK 362
            ++PN+ITFLGLL GCSHQGLV+EGV++F +MSS+F L P VKHYGC+VDLYGRAG+LE 
Sbjct: 304 GVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLEN 363

Query: 363 ALEIV-SNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 422
           +LE++ ++S   DPVLWR LLGSCKIH+N+ +GE+AM  L +L A NAGD +L+ +IY+ 
Sbjct: 364 SLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSA 423

Query: 423 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 482
            ND    A MRK+I+   ++T PGWSWIEI DQVHKFVVDDK H  S  +Y +L EVI++
Sbjct: 424 ANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINR 483

Query: 483 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 542
           A L GY  ++S  +   LS    L ++ T HSEKLAIA+GL R + GT +RI KNLRVCR
Sbjct: 484 AILAGYKPEDSNRTAPTLS-DRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCR 543

Query: 543 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
           DCHSF K VS AFNREIIVRDRVRFHHF  G CSCNDYW
Sbjct: 544 DCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581

BLAST of ClCG01G004060 vs. Swiss-Prot
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 447.6 bits (1150), Expect = 2.1e-124
Identity = 237/579 (40.93%), Postives = 356/579 (61.49%), Query Frame = 1

Query: 8   ITLLQ--GCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGS--LAYAQLLFHQ 67
           I LLQ  G +++ KLR+IHA  I  G+    A   K L F  +S+     ++YA  +F +
Sbjct: 19  INLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSK 78

Query: 68  MACP-QTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAER 127
           +  P     WN++IRG+A+  + I A   Y  M  +    PDT T+ F++KA   +   R
Sbjct: 79  IEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138

Query: 128 KCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFS 187
             + +H  VIR G+   + V  +L+  Y+  G V SA +VFD+MP +DLVAWN++I+ F+
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198

Query: 188 QQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLY 247
           + G   E+L  Y +M S+ +  DGFT+V L+S+CA +GAL +G ++H +  + GL ++L+
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 258

Query: 248 VGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEAR 307
             N L+D+YA+CG +++A  +FD M  K+  +W S+IVG  V+G G EAI  F+ M    
Sbjct: 259 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318

Query: 308 -MQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEK 367
            + P  ITF+G+L  CSH G+V+EG +YF  M  E+++ P ++H+GC+VDL  RAG+++K
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378

Query: 368 ALE-IVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 427
           A E I S   Q + V+WR LLG+C +H +  + E A   + +L   ++GD +LL+ +YA 
Sbjct: 379 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYAS 438

Query: 428 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 487
           +   + V ++RK + R G+K  PG S +E+ ++VH+F++ DKSH  S  +Y KL+E+  +
Sbjct: 439 EQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGR 498

Query: 488 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 547
               GYV    IS++ V    E  + +  YHSEK+AIAF L    + + I +VKNLRVC 
Sbjct: 499 LRSEGYV--PQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 558

Query: 548 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
           DCH  IK VS  +NREI+VRDR RFHHF  G CSC DYW
Sbjct: 559 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

BLAST of ClCG01G004060 vs. Swiss-Prot
Match: PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2)

HSP 1 Score: 420.6 bits (1080), Expect = 2.7e-116
Identity = 223/574 (38.85%), Postives = 344/574 (59.93%), Query Frame = 1

Query: 8   ITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAIS-VSGSLAYAQLLFHQMAC 67
           I L+  CN+L +L +I A+ I S + D V+   KL+NFC  S    S++YA+ LF  M+ 
Sbjct: 33  ILLISKCNSLRELMQIQAYAIKSHIED-VSFVAKLINFCTESPTESSMSYARHLFEAMSE 92

Query: 68  PQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAERKCKE 127
           P    +NS+ RG+++ ++P+E    +  ++      PD +TF  +LKAC   KA  + ++
Sbjct: 93  PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGIL-PDNYTFPSLLKACAVAKALEEGRQ 152

Query: 128 VHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGL 187
           +H   ++ G D +V VC  L+  Y+    V SA+ VFD +    +V +NAMI+ ++++  
Sbjct: 153 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 212

Query: 188 HLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNA 247
             E+L  + +M+ + +  +  TL+ ++SSCA LG+L++G  +H++A++    + + V  A
Sbjct: 213 PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTA 272

Query: 248 LIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPN 307
           LIDM+AKCGSLD A+ IF++M+ KD   W++MIV Y  HG+  +++  F++M    +QP+
Sbjct: 273 LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPD 332

Query: 308 SITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIV 367
            ITFLGLL  CSH G V+EG KYF  M S+F + P +KHYG +VDL  RAG LE A E +
Sbjct: 333 EITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFI 392

Query: 368 SN-SSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAGKNDTA 427
                   P+LWRILL +C  H N+ + E     + EL  ++ GD ++L+ +YA      
Sbjct: 393 DKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWE 452

Query: 428 GVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFG 487
            V  +RK++K +     PG S IE+ + VH+F   D     + +++  L E++ +  L G
Sbjct: 453 YVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSG 512

Query: 488 YVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSF 547
           YV D S+     ++  E  + +  YHSEKLAI FGL     GT IR+VKNLRVCRDCH+ 
Sbjct: 513 YVPDTSMVVHANMNDQEK-EITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNA 572

Query: 548 IKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
            K +S  F R++++RD  RFHHF  G+CSC D+W
Sbjct: 573 AKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603

BLAST of ClCG01G004060 vs. Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 416.0 bits (1068), Expect = 6.7e-115
Identity = 229/630 (36.35%), Postives = 362/630 (57.46%), Query Frame = 1

Query: 2   SKEKAIITLLQGCNNLNKLRKIHAHVIVSG-LRDHVAIGNKLLNFCAISV--SGSLAYAQ 61
           S   ++   +  C  +  L +IHA  I SG +RD +A   ++L FCA S      L YA 
Sbjct: 21  SHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAA-EILRFCATSDLHHRDLDYAH 80

Query: 62  LLFHQMACPQTEAWNSIIRGFAQSSSP--IEAIVFYNRMISASFSSPDTFTFSFVLKACE 121
            +F+QM      +WN+IIRGF++S     + AI  +  M+S  F  P+ FTF  VLKAC 
Sbjct: 81  KIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACA 140

Query: 122 RIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVC------------------- 181
           +    ++ K++HG  ++ G+ GD  V +NLV+ Y + G +                    
Sbjct: 141 KTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMT 200

Query: 182 --------------------------SAQQVFDEMPARDLVAWNAMISCFSQQGLHLESL 241
                                     +A+ +FD+M  R +V+WN MIS +S  G   +++
Sbjct: 201 DRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAV 260

Query: 242 ETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMY 301
           E + +M+  ++  +  TLV ++ + + LG+L +G  +H +A + G+     +G+ALIDMY
Sbjct: 261 EVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMY 320

Query: 302 AKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPNSITFL 361
           +KCG +++AI +F+R+ ++++ TW++MI G+ +HG+  +AI CF +M +A ++P+ + ++
Sbjct: 321 SKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYI 380

Query: 362 GLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSS- 421
            LL  CSH GLV+EG +YF  M S   L P ++HYGC+VDL GR+G L++A E + N   
Sbjct: 381 NLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPI 440

Query: 422 QNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAGKNDTAGVARM 481
           + D V+W+ LLG+C++  NV +G+   N L ++   ++G  + L+ +YA + + + V+ M
Sbjct: 441 KPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEM 500

Query: 482 RKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDE 541
           R  +K + I+  PG S I+I+  +H+FVV+D SH  + E+   L E+  +  L GY    
Sbjct: 501 RLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY---R 560

Query: 542 SISSLDVLSTTETLKTSCT-YHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAV 580
            I++  +L+  E  K +   YHSEK+A AFGL   S G  IRIVKNLR+C DCHS IK +
Sbjct: 561 PITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLI 620

BLAST of ClCG01G004060 vs. Swiss-Prot
Match: PPR71_ARATH (Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2)

HSP 1 Score: 412.9 bits (1060), Expect = 5.7e-114
Identity = 217/582 (37.29%), Postives = 339/582 (58.25%), Query Frame = 1

Query: 9   TLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQ 68
           T++Q C + ++++++ +H + +G      + ++LL  CAIS  G L++A  +F  +  P 
Sbjct: 8   TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67

Query: 69  TEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSP-----DTFTFSFVLKACERIKAERK 128
           T  WN+IIRGFA SS P  A  +Y  M+  S SS      D  T SF LKAC R      
Sbjct: 68  TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127

Query: 129 CKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQ 188
             ++H  + R G   D ++CT L+  YS  G + SA ++FDEMP RD+ +WNA+I+    
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187

Query: 189 QGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQM-HRFAREKGLVQSLY 248
                E++E Y +M +E +     T+V  + +C+HLG +  G  + H ++ +     ++ 
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSND-----NVI 247

Query: 249 VGNALIDMYAKCGSLDQAILIFDRMQ-KKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEA 308
           V NA IDMY+KCG +D+A  +F++   KK + TWN+MI G+ VHG    A+  F ++ + 
Sbjct: 248 VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDN 307

Query: 309 RMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEK 368
            ++P+ +++L  L  C H GLV+ G+  F+ M+ +  +   +KHYGC+VDL  RAG+L +
Sbjct: 308 GIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLRE 367

Query: 369 ALEIVSNSSQ-NDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 428
           A +I+ + S   DPVLW+ LLG+ +I+ +V + EIA   + E+G  N GD +LL+ +YA 
Sbjct: 368 AHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAA 427

Query: 429 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 488
           +     V R+R  ++ + +K  PG S+IE +  +H+F   DKSH    E+YEK+ E+  +
Sbjct: 428 QGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFK 487

Query: 489 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARI---SDGTQIRIVKNLR 548
               GYV    +   D+    E  + +  YHSEKLA+A+GL  +    + + +R++ NLR
Sbjct: 488 IREDGYVAQTGLVLHDI--GEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLR 547

Query: 549 VCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
           +C DCH   K +S  + REIIVRDRVRFH F  G CSC D+W
Sbjct: 548 ICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581

BLAST of ClCG01G004060 vs. TrEMBL
Match: A0A0A0LH20_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074120 PE=4 SV=1)

HSP 1 Score: 1069.7 bits (2765), Expect = 1.3e-309
Identity = 522/579 (90.16%), Postives = 547/579 (94.47%), Query Frame = 1

Query: 1   MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLL 60
           MS EKAI+ LLQGCN+L +LRKIHAHVIVSGL  HV I NKLLNFCAISVSGSLAYAQLL
Sbjct: 1   MSNEKAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLL 60

Query: 61  FHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKA 120
           FHQM CPQTEAWNSIIRGFAQSSSPI+AIVFYN+M+  SFS PDTFTFSFVLKACERIKA
Sbjct: 61  FHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKA 120

Query: 121 ERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISC 180
           ERKCKEVHGSVIRCGYD DVIVCTNLVKCYS MGSVC A+QVFD+MPARDLVAWNAMISC
Sbjct: 121 ERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISC 180

Query: 181 FSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQS 240
           FSQQGLH E+L+TYNQMRSENVD+DGFTLVGLISSCAHLGALNIGVQMHRFARE GL QS
Sbjct: 181 FSQQGLHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQS 240

Query: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300
           LYVGNALIDMYAKCGSLDQAILIFDRMQ+KDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
Sbjct: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300

Query: 301 ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLE 360
           AR+QPN +TFLGLLCGCSHQGLVQEGVKYF+LMSS+FRL+PEVKHYGCLVDLYGRAGKL+
Sbjct: 301 ARIQPNPVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLD 360

Query: 361 KALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 420
           KALEIVSNSS ND VLWRILLGSCKIHKNVTIGEIAMN L ELGAT+AGDCILLATIYAG
Sbjct: 361 KALEIVSNSSHNDSVLWRILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAG 420

Query: 421 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 480
           + D AGVARMRKMIK QG KTTPGWSWIEI +QVHKFVVDDKSHRYS+EVYEKLREVIHQ
Sbjct: 421 EKDKAGVARMRKMIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQ 480

Query: 481 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 540
           AS FGYVGDESISSLD+LST ETLKTSCTYHSEKLAIAFGLAR +DGTQIRIVKNLRVCR
Sbjct: 481 ASFFGYVGDESISSLDMLSTMETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVCR 540

Query: 541 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
           DCHSFIKAVS AFNREIIVRDRVRFHHF GG+CSCNDYW
Sbjct: 541 DCHSFIKAVSVAFNREIIVRDRVRFHHFKGGECSCNDYW 579

BLAST of ClCG01G004060 vs. TrEMBL
Match: B9IHK4_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0016s02930g PE=4 SV=2)

HSP 1 Score: 837.0 bits (2161), Expect = 1.4e-239
Identity = 402/579 (69.43%), Postives = 481/579 (83.07%), Query Frame = 1

Query: 2   SKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF 61
           SK  AI+T+LQGCNNL +L+KI AHVIV+GL++H AI N +LNFCA+S+SGSL YAQ LF
Sbjct: 7   SKANAILTVLQGCNNLTRLKKIQAHVIVNGLQNHPAISNSILNFCAVSISGSLPYAQHLF 66

Query: 62  HQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAE 121
             +  PQT+AWNSIIRGFAQS SP++AI +YNRM+  S S PDTFTFSF LKACERIKA 
Sbjct: 67  RHILNPQTQAWNSIIRGFAQSPSPVQAIFYYNRMLFDSVSGPDTFTFSFTLKACERIKAL 126

Query: 122 RKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCF 181
           +KC+EVHGS+IR GY+ DV+VCT LV+CY   G V  A+ VFD MP RDLVAWNAMISC+
Sbjct: 127 KKCEEVHGSIIRTGYERDVVVCTGLVRCYGRNGCVEIARMVFDNMPERDLVAWNAMISCY 186

Query: 182 SQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSL 241
           SQ G H E+L  Y+ MR+ENV VDGFTLVGL+SSC+H+GALN+GV++HR A EKGL++++
Sbjct: 187 SQAGYHQEALRVYDYMRNENVGVDGFTLVGLLSSCSHVGALNMGVKLHRIASEKGLLRNV 246

Query: 242 YVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEA 301
           +VGNALIDMYAKCGSLD A+ +F+ M  +D+FTWNSMIVG+GVHG G EAIY F QMLEA
Sbjct: 247 FVGNALIDMYAKCGSLDGALEVFNGM-PRDVFTWNSMIVGFGVHGFGDEAIYFFNQMLEA 306

Query: 302 RMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEK 361
            ++PNSI FLGLLCGCSHQGLV+EGV++FH MSS+F ++P +KHYGC+VD+YGRAGKLEK
Sbjct: 307 GVRPNSIAFLGLLCGCSHQGLVEEGVEFFHQMSSKFNVKPGIKHYGCMVDMYGRAGKLEK 366

Query: 362 ALEIVSNSS-QNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 421
           ALEI+ +S  Q+DPVLWRILL S KIHKNV IGEIAM +L +LGA NAGDC+LLATIYAG
Sbjct: 367 ALEIIGDSPWQDDPVLWRILLSSSKIHKNVVIGEIAMRNLSQLGAVNAGDCVLLATIYAG 426

Query: 422 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 481
            ND  GVARMRK+IK+QGIKTTPGWSWIE+ DQVH+FVVDDKSH  S  +Y+KL EV H+
Sbjct: 427 ANDEQGVARMRKLIKKQGIKTTPGWSWIEVSDQVHRFVVDDKSHPDSGMIYQKLEEVTHK 486

Query: 482 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 541
           A++ GYV D+S        + E L++S TYHSEKLAIAFGLA+  +GT +RIVKNLRVCR
Sbjct: 487 ATMAGYVEDKSQFIFHGSCSEECLESSSTYHSEKLAIAFGLAKTPEGTSLRIVKNLRVCR 546

Query: 542 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
           DCH F K VS AFNR+IIVRDR+RFHHF GG CSC DYW
Sbjct: 547 DCHEFTKFVSRAFNRDIIVRDRLRFHHFKGGLCSCRDYW 584

BLAST of ClCG01G004060 vs. TrEMBL
Match: F6I4J1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00200 PE=4 SV=1)

HSP 1 Score: 804.7 bits (2077), Expect = 7.5e-230
Identity = 386/584 (66.10%), Postives = 481/584 (82.36%), Query Frame = 1

Query: 1   MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLL 60
           M+  +AI++LLQGCN++ KL KIHAH++++G + + +I  KLLNFCA+SVSGSLAYAQL+
Sbjct: 1   MANARAILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLV 60

Query: 61  FHQMACPQTEAWNSIIRGFAQSSSPIE--AIVFYNRMISASFSSPDTFTFSFVLKACERI 120
           FH++  PQT AWNS+IRGF+QS SP++  AIVFYN M+SAS + PDT+TFSF+LKACE  
Sbjct: 61  FHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEA 120

Query: 121 KAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMI 180
           K E KC+EVHG +IR GYD DV++CTNL++ Y+  G + +A +VF+EMPARDLV+WN+MI
Sbjct: 121 KEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMI 180

Query: 181 SCFSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLV 240
           SC+ Q GLH E+L+ Y+QMR  NV  DGFTLV L+SSCAH+GAL++GVQMHRFA E+ LV
Sbjct: 181 SCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLV 240

Query: 241 QSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQM 300
           ++++VGNALIDMYAKCGSL  A+ IF+ M K+D+FTWNSMIVGYGVHGRG EAI  F  M
Sbjct: 241 ENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSM 300

Query: 301 LEARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGK 360
           L A ++PNSITFLGLLCGCSHQGLV+EGV+YFH+MSSEF L+P +KHYGC+VDL+GRAGK
Sbjct: 301 LMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGK 360

Query: 361 LEKALEIV-SNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATI 420
           L++ALE++ S+ SQ+DPVLWR LLGSCKIH+NV IGE+AM +L +LG+  AGDC+LL+ I
Sbjct: 361 LKEALEVIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGI 420

Query: 421 YAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREV 480
           YA   D  GVARMRK+I+ +GIKTTPGWSWIE+ DQVH+FVVDDKSH  S E+Y KL EV
Sbjct: 421 YAEAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEV 480

Query: 481 IHQASLFGYVGDESISSLDVLSTTETL--KTSCTYHSEKLAIAFGLARISDGTQIRIVKN 540
           IH+ASL GY  +ES       S T+    +TS +YHSEKLAIA+GLAR  +GT + IVKN
Sbjct: 481 IHRASLVGYAMEESSLVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKN 540

Query: 541 LRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
           LRVCRDCH+F K VS AF+REIIVRDRVRFHHF GG CSC ++W
Sbjct: 541 LRVCRDCHNFTKFVSMAFDREIIVRDRVRFHHFKGGHCSCKEFW 584

BLAST of ClCG01G004060 vs. TrEMBL
Match: M5WNK1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017094mg PE=4 SV=1)

HSP 1 Score: 803.9 bits (2075), Expect = 1.3e-229
Identity = 394/583 (67.58%), Postives = 480/583 (82.33%), Query Frame = 1

Query: 2   SKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF 61
           SK KAI+ LLQGCN+L +L+KIHA+VI +GL+   AI NKLLNFCA+SVSG LAYAQLLF
Sbjct: 19  SKAKAILALLQGCNSLIRLKKIHAYVITNGLQHQTAISNKLLNFCAVSVSGCLAYAQLLF 78

Query: 62  HQ-MACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMIS-ASFSSPDTFTFSFVLKACERIK 121
           H  +  PQT+ WNS+IRGF+QS SP++AI +YN M+S AS S PDTFTFSFVLKACE++K
Sbjct: 79  HHHIQNPQTQDWNSMIRGFSQSPSPLQAIFYYNHMLSSASDSCPDTFTFSFVLKACEKVK 138

Query: 122 AERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMIS 181
           A+ KCKE            DV+VCTNL++ YS  GS+ +AQ+VFD M  RDLV+WN+MIS
Sbjct: 139 AQTKCKE-----------NDVVVCTNLIRSYSCNGSIDTAQRVFDNMLERDLVSWNSMIS 198

Query: 182 CFSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQ 241
           C+SQ+G H E+L TYN MR ENV +DGFTLVGL+SSCAHLGALN GV +HR AREKGL+ 
Sbjct: 199 CYSQRGFHHEALSTYNLMRKENVGLDGFTLVGLLSSCAHLGALNTGVTVHRIAREKGLLG 258

Query: 242 SLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQML 301
           ++YVGNALIDMYAKCG+LD A+ +F+RMQ +D+FTWNSMIVGYGVHGRG E+I  F QML
Sbjct: 259 NVYVGNALIDMYAKCGNLDSALSVFERMQNRDVFTWNSMIVGYGVHGRGDESISFFGQML 318

Query: 302 EARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKL 361
            A ++PNSITFLGLLCGCSHQGLV++GV+YF++MS +F ++P +KHYGCLVDL+GRAG L
Sbjct: 319 MAGVRPNSITFLGLLCGCSHQGLVEKGVEYFNVMSFKFNIKPGIKHYGCLVDLFGRAGML 378

Query: 362 EKALEIVSNS-SQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIY 421
           +KAL+++  S +Q+DPVLWR LLGSCKIHKNV IGEIAM +L +LG++NAGD +LLATIY
Sbjct: 379 KKALQVIRTSRAQDDPVLWRTLLGSCKIHKNVEIGEIAMRNLIQLGSSNAGDYVLLATIY 438

Query: 422 AGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVI 481
             + D  GVARMRK+IK QG+KTTPGWSWIEI DQVHKFVVDDKSH  + E+Y+KLR V+
Sbjct: 439 FREKDADGVARMRKLIKTQGVKTTPGWSWIEIGDQVHKFVVDDKSHPDANEIYQKLRVVV 498

Query: 482 HQASLFGYVGDESISSLDVLSTTET--LKTSCTYHSEKLAIAFGLARISDGTQIRIVKNL 541
           HQA+L GYV + S+ ++   ++T+T  L+TS + H EKLAIAFGLAR  +GT +RIVKNL
Sbjct: 499 HQAALHGYVQEGSLITVSEFNSTDTDCLETSGSCHGEKLAIAFGLARTPEGTCLRIVKNL 558

Query: 542 RVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
           RVCRDCHSF K VS AFNREI+VRDRVRFHHF GG CSC DYW
Sbjct: 559 RVCRDCHSFTKFVSQAFNREIVVRDRVRFHHFKGGLCSCKDYW 590

BLAST of ClCG01G004060 vs. TrEMBL
Match: W9QXM0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022672 PE=4 SV=1)

HSP 1 Score: 782.7 bits (2020), Expect = 3.1e-223
Identity = 383/584 (65.58%), Postives = 468/584 (80.14%), Query Frame = 1

Query: 2   SKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF 61
           SK K I+ LLQGCN+L KLRKIHA VI +GL+ H AI  KLL+FCA+SVSGSL YA LLF
Sbjct: 12  SKAKTILKLLQGCNSLKKLRKIHAFVITNGLQHHPAISTKLLHFCAVSVSGSLPYAVLLF 71

Query: 62  -HQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSS----PDTFTFSFVLKACE 121
            H +  PQT+ WNSIIRGF+QS +P++AI +YN M+ A+  +    PD++TFSF+L+A E
Sbjct: 72  RHHILNPQTDDWNSIIRGFSQSPNPLKAIFYYNDMVLAADKNFDCRPDSYTFSFLLRASE 131

Query: 122 RIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNA 181
           R KAERKC+EVHGS+IR GY+ DV+VCTNLVK Y   G V +A++VFDEMP +DLV+WN+
Sbjct: 132 RTKAERKCREVHGSIIRRGYEADVVVCTNLVKSYCGNGLVETARKVFDEMPVKDLVSWNS 191

Query: 182 MISCFSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKG 241
           MI C+SQ G H E+L TY+ MR+ENV VDGFTLVGL+SSCAH+GA NIGV+MHR A ++ 
Sbjct: 192 MILCYSQAGFHHEALRTYDLMRNENVGVDGFTLVGLLSSCAHVGAQNIGVEMHRMACKRE 251

Query: 242 LVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQ 301
            +++++VGNALI+MYAKCG+LD A  +FD M K+D+ TWNSM+VGYG HG G EAI  F+
Sbjct: 252 FLRNVFVGNALINMYAKCGNLDAARSVFDSMIKRDVLTWNSMVVGYGGHGLGKEAIEFFE 311

Query: 302 QMLEARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRA 361
           +ML A   PNSITFLGLLCGC+HQGLV+EGV+YFH M+S++ ++P +KHYGCLVDL+GRA
Sbjct: 312 KMLMAGFHPNSITFLGLLCGCNHQGLVEEGVEYFHRMTSKYNIKPGIKHYGCLVDLFGRA 371

Query: 362 GKLEKALEIVSN-SSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLA 421
           GKLEKALE++ N  SQ+DPVLWR LL SCKIHKNV +GEIAM SL ++GA+NAGDCILLA
Sbjct: 372 GKLEKALEVIKNCPSQHDPVLWRTLLSSCKIHKNVEMGEIAMRSLVQVGASNAGDCILLA 431

Query: 422 TIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLR 481
           +IY G N+  GVARMRKMIK  GI+TTPGWSWIE+ DQVHKFVVDDKSH ++ E+Y KLR
Sbjct: 432 SIYQGVNNVDGVARMRKMIKSWGIRTTPGWSWIEVADQVHKFVVDDKSHPHTNEIYNKLR 491

Query: 482 EVIHQASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKN 541
           EVIH  S  GYV +    +           ++ +YHSEKLAIAFG+AR  +GT +RIVKN
Sbjct: 492 EVIHVLSQLGYVEEGFWGT-----------STSSYHSEKLAIAFGIARTPEGTCLRIVKN 551

Query: 542 LRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
           LRVC DCHSF K VS AFNREI+VRDRVRFHHF GG CSCNDYW
Sbjct: 552 LRVCGDCHSFTKFVSKAFNREIVVRDRVRFHHFKGGLCSCNDYW 584

BLAST of ClCG01G004060 vs. TAIR10
Match: AT3G56550.1 (AT3G56550.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 709.5 bits (1830), Expect = 1.7e-204
Identity = 347/579 (59.93%), Postives = 439/579 (75.82%), Query Frame = 1

Query: 3   KEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF- 62
           K + I+ +LQGCN++ KLRKIH+HVI++GL+ H +I N LL FCA+SV+GSL++AQLLF 
Sbjct: 4   KARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFD 63

Query: 63  HQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAE 122
           H  + P T  WN +IRGF+ SSSP+ +I+FYNRM+ +S S PD FTF+F LK+CERIK+ 
Sbjct: 64  HFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSI 123

Query: 123 RKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCF 182
            KC E+HGSVIR G+  D IV T+LV+CYS  GSV  A +VFDEMP RDLV+WN MI CF
Sbjct: 124 PKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCF 183

Query: 183 SQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSL 242
           S  GLH ++L  Y +M +E V  D +TLV L+SSCAH+ ALN+GV +HR A +      +
Sbjct: 184 SHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCV 243

Query: 243 YVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEA 302
           +V NALIDMYAKCGSL+ AI +F+ M+K+D+ TWNSMI+GYGVHG G EAI  F++M+ +
Sbjct: 244 FVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS 303

Query: 303 RMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEK 362
            ++PN+ITFLGLL GCSHQGLV+EGV++F +MSS+F L P VKHYGC+VDLYGRAG+LE 
Sbjct: 304 GVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLEN 363

Query: 363 ALEIV-SNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 422
           +LE++ ++S   DPVLWR LLGSCKIH+N+ +GE+AM  L +L A NAGD +L+ +IY+ 
Sbjct: 364 SLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSA 423

Query: 423 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 482
            ND    A MRK+I+   ++T PGWSWIEI DQVHKFVVDDK H  S  +Y +L EVI++
Sbjct: 424 ANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINR 483

Query: 483 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 542
           A L GY  ++S  +   LS    L ++ T HSEKLAIA+GL R + GT +RI KNLRVCR
Sbjct: 484 AILAGYKPEDSNRTAPTLS-DRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCR 543

Query: 543 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
           DCHSF K VS AFNREIIVRDRVRFHHF  G CSCNDYW
Sbjct: 544 DCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581

BLAST of ClCG01G004060 vs. TAIR10
Match: AT4G21065.1 (AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 447.6 bits (1150), Expect = 1.2e-125
Identity = 237/579 (40.93%), Postives = 356/579 (61.49%), Query Frame = 1

Query: 8   ITLLQ--GCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGS--LAYAQLLFHQ 67
           I LLQ  G +++ KLR+IHA  I  G+    A   K L F  +S+     ++YA  +F +
Sbjct: 19  INLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSK 78

Query: 68  MACP-QTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAER 127
           +  P     WN++IRG+A+  + I A   Y  M  +    PDT T+ F++KA   +   R
Sbjct: 79  IEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138

Query: 128 KCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFS 187
             + +H  VIR G+   + V  +L+  Y+  G V SA +VFD+MP +DLVAWN++I+ F+
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198

Query: 188 QQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLY 247
           + G   E+L  Y +M S+ +  DGFT+V L+S+CA +GAL +G ++H +  + GL ++L+
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 258

Query: 248 VGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEAR 307
             N L+D+YA+CG +++A  +FD M  K+  +W S+IVG  V+G G EAI  F+ M    
Sbjct: 259 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318

Query: 308 -MQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEK 367
            + P  ITF+G+L  CSH G+V+EG +YF  M  E+++ P ++H+GC+VDL  RAG+++K
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378

Query: 368 ALE-IVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 427
           A E I S   Q + V+WR LLG+C +H +  + E A   + +L   ++GD +LL+ +YA 
Sbjct: 379 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYAS 438

Query: 428 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 487
           +   + V ++RK + R G+K  PG S +E+ ++VH+F++ DKSH  S  +Y KL+E+  +
Sbjct: 439 EQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGR 498

Query: 488 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 547
               GYV    IS++ V    E  + +  YHSEK+AIAF L    + + I +VKNLRVC 
Sbjct: 499 LRSEGYV--PQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 558

Query: 548 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
           DCH  IK VS  +NREI+VRDR RFHHF  G CSC DYW
Sbjct: 559 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

BLAST of ClCG01G004060 vs. TAIR10
Match: AT2G02980.1 (AT2G02980.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 420.6 bits (1080), Expect = 1.5e-117
Identity = 223/574 (38.85%), Postives = 344/574 (59.93%), Query Frame = 1

Query: 8   ITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAIS-VSGSLAYAQLLFHQMAC 67
           I L+  CN+L +L +I A+ I S + D V+   KL+NFC  S    S++YA+ LF  M+ 
Sbjct: 33  ILLISKCNSLRELMQIQAYAIKSHIED-VSFVAKLINFCTESPTESSMSYARHLFEAMSE 92

Query: 68  PQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAERKCKE 127
           P    +NS+ RG+++ ++P+E    +  ++      PD +TF  +LKAC   KA  + ++
Sbjct: 93  PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGIL-PDNYTFPSLLKACAVAKALEEGRQ 152

Query: 128 VHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGL 187
           +H   ++ G D +V VC  L+  Y+    V SA+ VFD +    +V +NAMI+ ++++  
Sbjct: 153 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 212

Query: 188 HLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNA 247
             E+L  + +M+ + +  +  TL+ ++SSCA LG+L++G  +H++A++    + + V  A
Sbjct: 213 PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTA 272

Query: 248 LIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPN 307
           LIDM+AKCGSLD A+ IF++M+ KD   W++MIV Y  HG+  +++  F++M    +QP+
Sbjct: 273 LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPD 332

Query: 308 SITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIV 367
            ITFLGLL  CSH G V+EG KYF  M S+F + P +KHYG +VDL  RAG LE A E +
Sbjct: 333 EITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFI 392

Query: 368 SN-SSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAGKNDTA 427
                   P+LWRILL +C  H N+ + E     + EL  ++ GD ++L+ +YA      
Sbjct: 393 DKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWE 452

Query: 428 GVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFG 487
            V  +RK++K +     PG S IE+ + VH+F   D     + +++  L E++ +  L G
Sbjct: 453 YVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSG 512

Query: 488 YVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSF 547
           YV D S+     ++  E  + +  YHSEKLAI FGL     GT IR+VKNLRVCRDCH+ 
Sbjct: 513 YVPDTSMVVHANMNDQEK-EITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNA 572

Query: 548 IKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
            K +S  F R++++RD  RFHHF  G+CSC D+W
Sbjct: 573 AKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603

BLAST of ClCG01G004060 vs. TAIR10
Match: AT5G48910.1 (AT5G48910.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 416.0 bits (1068), Expect = 3.8e-116
Identity = 229/630 (36.35%), Postives = 362/630 (57.46%), Query Frame = 1

Query: 2   SKEKAIITLLQGCNNLNKLRKIHAHVIVSG-LRDHVAIGNKLLNFCAISV--SGSLAYAQ 61
           S   ++   +  C  +  L +IHA  I SG +RD +A   ++L FCA S      L YA 
Sbjct: 21  SHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAA-EILRFCATSDLHHRDLDYAH 80

Query: 62  LLFHQMACPQTEAWNSIIRGFAQSSSP--IEAIVFYNRMISASFSSPDTFTFSFVLKACE 121
            +F+QM      +WN+IIRGF++S     + AI  +  M+S  F  P+ FTF  VLKAC 
Sbjct: 81  KIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACA 140

Query: 122 RIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVC------------------- 181
           +    ++ K++HG  ++ G+ GD  V +NLV+ Y + G +                    
Sbjct: 141 KTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMT 200

Query: 182 --------------------------SAQQVFDEMPARDLVAWNAMISCFSQQGLHLESL 241
                                     +A+ +FD+M  R +V+WN MIS +S  G   +++
Sbjct: 201 DRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAV 260

Query: 242 ETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMY 301
           E + +M+  ++  +  TLV ++ + + LG+L +G  +H +A + G+     +G+ALIDMY
Sbjct: 261 EVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMY 320

Query: 302 AKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPNSITFL 361
           +KCG +++AI +F+R+ ++++ TW++MI G+ +HG+  +AI CF +M +A ++P+ + ++
Sbjct: 321 SKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYI 380

Query: 362 GLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSS- 421
            LL  CSH GLV+EG +YF  M S   L P ++HYGC+VDL GR+G L++A E + N   
Sbjct: 381 NLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPI 440

Query: 422 QNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAGKNDTAGVARM 481
           + D V+W+ LLG+C++  NV +G+   N L ++   ++G  + L+ +YA + + + V+ M
Sbjct: 441 KPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEM 500

Query: 482 RKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDE 541
           R  +K + I+  PG S I+I+  +H+FVV+D SH  + E+   L E+  +  L GY    
Sbjct: 501 RLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY---R 560

Query: 542 SISSLDVLSTTETLKTSCT-YHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAV 580
            I++  +L+  E  K +   YHSEK+A AFGL   S G  IRIVKNLR+C DCHS IK +
Sbjct: 561 PITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLI 620

BLAST of ClCG01G004060 vs. TAIR10
Match: AT1G34160.1 (AT1G34160.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 412.9 bits (1060), Expect = 3.2e-115
Identity = 217/582 (37.29%), Postives = 339/582 (58.25%), Query Frame = 1

Query: 9   TLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQ 68
           T++Q C + ++++++ +H + +G      + ++LL  CAIS  G L++A  +F  +  P 
Sbjct: 8   TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67

Query: 69  TEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSP-----DTFTFSFVLKACERIKAERK 128
           T  WN+IIRGFA SS P  A  +Y  M+  S SS      D  T SF LKAC R      
Sbjct: 68  TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127

Query: 129 CKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQ 188
             ++H  + R G   D ++CT L+  YS  G + SA ++FDEMP RD+ +WNA+I+    
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187

Query: 189 QGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQM-HRFAREKGLVQSLY 248
                E++E Y +M +E +     T+V  + +C+HLG +  G  + H ++ +     ++ 
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSND-----NVI 247

Query: 249 VGNALIDMYAKCGSLDQAILIFDRMQ-KKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEA 308
           V NA IDMY+KCG +D+A  +F++   KK + TWN+MI G+ VHG    A+  F ++ + 
Sbjct: 248 VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDN 307

Query: 309 RMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEK 368
            ++P+ +++L  L  C H GLV+ G+  F+ M+ +  +   +KHYGC+VDL  RAG+L +
Sbjct: 308 GIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLRE 367

Query: 369 ALEIVSNSSQ-NDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 428
           A +I+ + S   DPVLW+ LLG+ +I+ +V + EIA   + E+G  N GD +LL+ +YA 
Sbjct: 368 AHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAA 427

Query: 429 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 488
           +     V R+R  ++ + +K  PG S+IE +  +H+F   DKSH    E+YEK+ E+  +
Sbjct: 428 QGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFK 487

Query: 489 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARI---SDGTQIRIVKNLR 548
               GYV    +   D+    E  + +  YHSEKLA+A+GL  +    + + +R++ NLR
Sbjct: 488 IREDGYVAQTGLVLHDI--GEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLR 547

Query: 549 VCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
           +C DCH   K +S  + REIIVRDRVRFH F  G CSC D+W
Sbjct: 548 ICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581

BLAST of ClCG01G004060 vs. NCBI nr
Match: gi|449470352|ref|XP_004152881.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Cucumis sativus])

HSP 1 Score: 1069.7 bits (2765), Expect = 1.8e-309
Identity = 522/579 (90.16%), Postives = 547/579 (94.47%), Query Frame = 1

Query: 1   MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLL 60
           MS EKAI+ LLQGCN+L +LRKIHAHVIVSGL  HV I NKLLNFCAISVSGSLAYAQLL
Sbjct: 1   MSNEKAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLL 60

Query: 61  FHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKA 120
           FHQM CPQTEAWNSIIRGFAQSSSPI+AIVFYN+M+  SFS PDTFTFSFVLKACERIKA
Sbjct: 61  FHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKA 120

Query: 121 ERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISC 180
           ERKCKEVHGSVIRCGYD DVIVCTNLVKCYS MGSVC A+QVFD+MPARDLVAWNAMISC
Sbjct: 121 ERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISC 180

Query: 181 FSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQS 240
           FSQQGLH E+L+TYNQMRSENVD+DGFTLVGLISSCAHLGALNIGVQMHRFARE GL QS
Sbjct: 181 FSQQGLHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQS 240

Query: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300
           LYVGNALIDMYAKCGSLDQAILIFDRMQ+KDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
Sbjct: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300

Query: 301 ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLE 360
           AR+QPN +TFLGLLCGCSHQGLVQEGVKYF+LMSS+FRL+PEVKHYGCLVDLYGRAGKL+
Sbjct: 301 ARIQPNPVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLD 360

Query: 361 KALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 420
           KALEIVSNSS ND VLWRILLGSCKIHKNVTIGEIAMN L ELGAT+AGDCILLATIYAG
Sbjct: 361 KALEIVSNSSHNDSVLWRILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAG 420

Query: 421 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 480
           + D AGVARMRKMIK QG KTTPGWSWIEI +QVHKFVVDDKSHRYS+EVYEKLREVIHQ
Sbjct: 421 EKDKAGVARMRKMIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQ 480

Query: 481 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 540
           AS FGYVGDESISSLD+LST ETLKTSCTYHSEKLAIAFGLAR +DGTQIRIVKNLRVCR
Sbjct: 481 ASFFGYVGDESISSLDMLSTMETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVCR 540

Query: 541 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
           DCHSFIKAVS AFNREIIVRDRVRFHHF GG+CSCNDYW
Sbjct: 541 DCHSFIKAVSVAFNREIIVRDRVRFHHFKGGECSCNDYW 579

BLAST of ClCG01G004060 vs. NCBI nr
Match: gi|700206131|gb|KGN61250.1| (hypothetical protein Csa_2G074120 [Cucumis sativus])

HSP 1 Score: 1069.7 bits (2765), Expect = 1.8e-309
Identity = 522/579 (90.16%), Postives = 547/579 (94.47%), Query Frame = 1

Query: 1   MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLL 60
           MS EKAI+ LLQGCN+L +LRKIHAHVIVSGL  HV I NKLLNFCAISVSGSLAYAQLL
Sbjct: 1   MSNEKAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLL 60

Query: 61  FHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKA 120
           FHQM CPQTEAWNSIIRGFAQSSSPI+AIVFYN+M+  SFS PDTFTFSFVLKACERIKA
Sbjct: 61  FHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKA 120

Query: 121 ERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISC 180
           ERKCKEVHGSVIRCGYD DVIVCTNLVKCYS MGSVC A+QVFD+MPARDLVAWNAMISC
Sbjct: 121 ERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISC 180

Query: 181 FSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQS 240
           FSQQGLH E+L+TYNQMRSENVD+DGFTLVGLISSCAHLGALNIGVQMHRFARE GL QS
Sbjct: 181 FSQQGLHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQS 240

Query: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300
           LYVGNALIDMYAKCGSLDQAILIFDRMQ+KDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
Sbjct: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300

Query: 301 ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLE 360
           AR+QPN +TFLGLLCGCSHQGLVQEGVKYF+LMSS+FRL+PEVKHYGCLVDLYGRAGKL+
Sbjct: 301 ARIQPNPVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLD 360

Query: 361 KALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 420
           KALEIVSNSS ND VLWRILLGSCKIHKNVTIGEIAMN L ELGAT+AGDCILLATIYAG
Sbjct: 361 KALEIVSNSSHNDSVLWRILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAG 420

Query: 421 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 480
           + D AGVARMRKMIK QG KTTPGWSWIEI +QVHKFVVDDKSHRYS+EVYEKLREVIHQ
Sbjct: 421 EKDKAGVARMRKMIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQ 480

Query: 481 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 540
           AS FGYVGDESISSLD+LST ETLKTSCTYHSEKLAIAFGLAR +DGTQIRIVKNLRVCR
Sbjct: 481 ASFFGYVGDESISSLDMLSTMETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVCR 540

Query: 541 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
           DCHSFIKAVS AFNREIIVRDRVRFHHF GG+CSCNDYW
Sbjct: 541 DCHSFIKAVSVAFNREIIVRDRVRFHHFKGGECSCNDYW 579

BLAST of ClCG01G004060 vs. NCBI nr
Match: gi|659082517|ref|XP_008441882.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Cucumis melo])

HSP 1 Score: 1061.6 bits (2744), Expect = 4.9e-307
Identity = 523/579 (90.33%), Postives = 548/579 (94.65%), Query Frame = 1

Query: 1   MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLL 60
           MSKEKAI+TLLQGCN+L +LRKIHAHVIVSGL  HVAI NKLLNFCAISVSGSLAYAQLL
Sbjct: 1   MSKEKAILTLLQGCNSLKRLRKIHAHVIVSGLHHHVAIANKLLNFCAISVSGSLAYAQLL 60

Query: 61  FHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKA 120
           FHQ   PQTEAWNSIIRGFAQSSSPI+AIVFYN+M+  SFS  DTFTFSFVLKACERIKA
Sbjct: 61  FHQTEFPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVWDSFSMRDTFTFSFVLKACERIKA 120

Query: 121 ERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISC 180
           ERKCKEVHG+VIRCGYD DVIVCTNLVKCYS MGSV  A+QVFD+MPARDLVAWNAMISC
Sbjct: 121 ERKCKEVHGTVIRCGYDADVIVCTNLVKCYSAMGSVYIARQVFDKMPARDLVAWNAMISC 180

Query: 181 FSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQS 240
           FSQQGLH E+L+TYNQMRSENVD+DGFTLVGLISSCAHLGALNIGVQMHRFARE GL QS
Sbjct: 181 FSQQGLHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQS 240

Query: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300
           LYVGNALIDMYAKCGSLDQAILIFDRMQ+KDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
Sbjct: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300

Query: 301 ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLE 360
           AR+QPNSITFLGLLCGCSHQGLVQEGVKYF+LMSS+FRLRPEVKHYGCLVDLYGRAGKLE
Sbjct: 301 ARIQPNSITFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLRPEVKHYGCLVDLYGRAGKLE 360

Query: 361 KALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 420
           KALEIVSNSS ND VLWR LLGSCKIHKNVTIGEIAMN L ELGAT+AGDCILLATIYAG
Sbjct: 361 KALEIVSNSSHNDSVLWRTLLGSCKIHKNVTIGEIAMNRLFELGATSAGDCILLATIYAG 420

Query: 421 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 480
           +ND AGV+RMRKMIK QGIKTTPGWSWIEI +QVHKFVVDDKS+RYSIEVYEKLREVI+Q
Sbjct: 421 ENDKAGVSRMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSNRYSIEVYEKLREVIYQ 480

Query: 481 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 540
           AS FGYVGDES+SSLDVLST ETLKTSCTYHSEKLAIAFGLAR +DGTQIRIVKNLRVCR
Sbjct: 481 ASFFGYVGDESVSSLDVLSTIETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVCR 540

Query: 541 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
           DCHSFIKAVS AFNREIIVRDRVRFHHF GG+CSCNDYW
Sbjct: 541 DCHSFIKAVSVAFNREIIVRDRVRFHHFKGGKCSCNDYW 579

BLAST of ClCG01G004060 vs. NCBI nr
Match: gi|645221906|ref|XP_008246339.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Prunus mume])

HSP 1 Score: 840.5 bits (2170), Expect = 1.8e-240
Identity = 403/583 (69.13%), Postives = 493/583 (84.56%), Query Frame = 1

Query: 2   SKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF 61
           SK KAI+ LLQGCN+L KL+KIHAHVI +GL+   AI NKLLNFCA+SVSG LAYAQLLF
Sbjct: 19  SKTKAILALLQGCNSLIKLKKIHAHVITNGLQHQPAISNKLLNFCAVSVSGCLAYAQLLF 78

Query: 62  HQ-MACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMIS-ASFSSPDTFTFSFVLKACERIK 121
           H  +  PQT+ WNS+IRGF+QS SP++AI +YN M+S AS S PDTFTFSFVLKAC ++K
Sbjct: 79  HHHIQNPQTQDWNSMIRGFSQSPSPLQAIFYYNHMLSSASDSCPDTFTFSFVLKACVKVK 138

Query: 122 AERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMIS 181
           A+ KCKEVHG+++R GY+ D+++CTNL++ Y+  GS+ +AQ+VFD MP RDLV+WN+MIS
Sbjct: 139 AQTKCKEVHGAMVRYGYENDIVICTNLIRSYACNGSIDTAQRVFDNMPERDLVSWNSMIS 198

Query: 182 CFSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQ 241
           C+SQ+GLH E+L TYN MR ENV +DGFTLVGL+SSCAHLGALN GV +HR AREKGLV 
Sbjct: 199 CYSQKGLHHEALRTYNLMRKENVGLDGFTLVGLLSSCAHLGALNTGVTVHRIAREKGLVG 258

Query: 242 SLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQML 301
           ++YVGNALIDMYAKCG+LD A+ +F+RMQ +D+FTWNSMIVGYGVHGRG E+I  F QML
Sbjct: 259 NVYVGNALIDMYAKCGNLDSALSVFERMQNRDVFTWNSMIVGYGVHGRGDESISFFGQML 318

Query: 302 EARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKL 361
            A +QPNSITFLGLLCGCSHQGLV++GV+YF++MSS+F ++P +KHYGCLVDL+GRAG L
Sbjct: 319 MAGVQPNSITFLGLLCGCSHQGLVEKGVEYFNVMSSKFNIKPGIKHYGCLVDLFGRAGML 378

Query: 362 EKALEIVSNS-SQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIY 421
           EKAL+++  S +Q+DPVLWR LLGSCKIHKNV +GEIAM +L +LG++NAGD +LLATIY
Sbjct: 379 EKALQVIKTSRAQDDPVLWRTLLGSCKIHKNVEMGEIAMRNLIQLGSSNAGDYVLLATIY 438

Query: 422 AGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVI 481
             + D  GVARMRK+IK QG+KTTPGWSWIE+ DQVHKFVVDDKSH  + E+Y+KLR V+
Sbjct: 439 FREKDADGVARMRKLIKTQGVKTTPGWSWIEVGDQVHKFVVDDKSHPDANEIYQKLRVVV 498

Query: 482 HQASLFGYVGDESISSLDVLSTTET--LKTSCTYHSEKLAIAFGLARISDGTQIRIVKNL 541
           HQA+L GYV + S+ ++   ++T+T  L+TS + HSEKLAIAFGLAR  +GT +RIVKNL
Sbjct: 499 HQAALHGYVQEGSLITVSEFTSTDTDCLETSSSCHSEKLAIAFGLARTPEGTSLRIVKNL 558

Query: 542 RVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
           RVCRDCHSF K VS AFNREI+VRDRVRFHHF GG CSC DYW
Sbjct: 559 RVCRDCHSFTKFVSPAFNREIVVRDRVRFHHFKGGLCSCKDYW 601

BLAST of ClCG01G004060 vs. NCBI nr
Match: gi|566208377|ref|XP_002323212.2| (pentatricopeptide repeat-containing family protein [Populus trichocarpa])

HSP 1 Score: 837.0 bits (2161), Expect = 2.0e-239
Identity = 402/579 (69.43%), Postives = 481/579 (83.07%), Query Frame = 1

Query: 2   SKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF 61
           SK  AI+T+LQGCNNL +L+KI AHVIV+GL++H AI N +LNFCA+S+SGSL YAQ LF
Sbjct: 7   SKANAILTVLQGCNNLTRLKKIQAHVIVNGLQNHPAISNSILNFCAVSISGSLPYAQHLF 66

Query: 62  HQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAE 121
             +  PQT+AWNSIIRGFAQS SP++AI +YNRM+  S S PDTFTFSF LKACERIKA 
Sbjct: 67  RHILNPQTQAWNSIIRGFAQSPSPVQAIFYYNRMLFDSVSGPDTFTFSFTLKACERIKAL 126

Query: 122 RKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCF 181
           +KC+EVHGS+IR GY+ DV+VCT LV+CY   G V  A+ VFD MP RDLVAWNAMISC+
Sbjct: 127 KKCEEVHGSIIRTGYERDVVVCTGLVRCYGRNGCVEIARMVFDNMPERDLVAWNAMISCY 186

Query: 182 SQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSL 241
           SQ G H E+L  Y+ MR+ENV VDGFTLVGL+SSC+H+GALN+GV++HR A EKGL++++
Sbjct: 187 SQAGYHQEALRVYDYMRNENVGVDGFTLVGLLSSCSHVGALNMGVKLHRIASEKGLLRNV 246

Query: 242 YVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEA 301
           +VGNALIDMYAKCGSLD A+ +F+ M  +D+FTWNSMIVG+GVHG G EAIY F QMLEA
Sbjct: 247 FVGNALIDMYAKCGSLDGALEVFNGM-PRDVFTWNSMIVGFGVHGFGDEAIYFFNQMLEA 306

Query: 302 RMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEK 361
            ++PNSI FLGLLCGCSHQGLV+EGV++FH MSS+F ++P +KHYGC+VD+YGRAGKLEK
Sbjct: 307 GVRPNSIAFLGLLCGCSHQGLVEEGVEFFHQMSSKFNVKPGIKHYGCMVDMYGRAGKLEK 366

Query: 362 ALEIVSNSS-QNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 421
           ALEI+ +S  Q+DPVLWRILL S KIHKNV IGEIAM +L +LGA NAGDC+LLATIYAG
Sbjct: 367 ALEIIGDSPWQDDPVLWRILLSSSKIHKNVVIGEIAMRNLSQLGAVNAGDCVLLATIYAG 426

Query: 422 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 481
            ND  GVARMRK+IK+QGIKTTPGWSWIE+ DQVH+FVVDDKSH  S  +Y+KL EV H+
Sbjct: 427 ANDEQGVARMRKLIKKQGIKTTPGWSWIEVSDQVHRFVVDDKSHPDSGMIYQKLEEVTHK 486

Query: 482 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 541
           A++ GYV D+S        + E L++S TYHSEKLAIAFGLA+  +GT +RIVKNLRVCR
Sbjct: 487 ATMAGYVEDKSQFIFHGSCSEECLESSSTYHSEKLAIAFGLAKTPEGTSLRIVKNLRVCR 546

Query: 542 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
           DCH F K VS AFNR+IIVRDR+RFHHF GG CSC DYW
Sbjct: 547 DCHEFTKFVSRAFNRDIIVRDRLRFHHFKGGLCSCRDYW 584

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP284_ARATH2.9e-20359.93Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN... [more]
PP330_ARATH2.1e-12440.93Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN... [more]
PP145_ARATH2.7e-11638.85Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop... [more]
PP425_ARATH6.7e-11536.35Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN... [more]
PPR71_ARATH5.7e-11437.29Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana GN... [more]
Match NameE-valueIdentityDescription
A0A0A0LH20_CUCSA1.3e-30990.16Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074120 PE=4 SV=1[more]
B9IHK4_POPTR1.4e-23969.43Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... [more]
F6I4J1_VITVI7.5e-23066.10Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00200 PE=4 SV=... [more]
M5WNK1_PRUPE1.3e-22967.58Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017094mg PE=4 SV=1[more]
W9QXM0_9ROSA3.1e-22365.58Uncharacterized protein OS=Morus notabilis GN=L484_022672 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G56550.11.7e-20459.93 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G21065.11.2e-12540.93 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G02980.11.5e-11738.85 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT5G48910.13.8e-11636.35 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G34160.13.2e-11537.29 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
Match NameE-valueIdentityDescription
gi|449470352|ref|XP_004152881.1|1.8e-30990.16PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Cucumis sativu... [more]
gi|700206131|gb|KGN61250.1|1.8e-30990.16hypothetical protein Csa_2G074120 [Cucumis sativus][more]
gi|659082517|ref|XP_008441882.1|4.9e-30790.33PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Cucumis melo][more]
gi|645221906|ref|XP_008246339.1|1.8e-24069.13PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Prunus mume][more]
gi|566208377|ref|XP_002323212.2|2.0e-23969.43pentatricopeptide repeat-containing family protein [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006284 base-excision repair
biological_process GO:0006308 DNA catabolic process
biological_process GO:0043137 DNA replication, removal of RNA primer
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005730 nucleolus
cellular_component GO:0005654 nucleoplasm
molecular_function GO:0008409 5'-3' exonuclease activity
molecular_function GO:0017108 5'-flap endonuclease activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0000287 magnesium ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G004060.1ClCG01G004060.1mRNA


Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 71..98
score: 0.0011coord: 172..202
score: 7.6E-6coord: 346..365
score: 0
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 270..318
score: 3.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 245..272
score: 7.1E-5coord: 273..306
score: 9.4E-8coord: 71..104
score: 3.5E-4coord: 172..205
score: 1.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 342..376
score: 7.333coord: 68..102
score: 8.484coord: 306..336
score: 7.081coord: 139..169
score: 7.552coord: 170..204
score: 10.227coord: 205..239
score: 6.588coord: 104..138
score: 6.007coord: 271..305
score: 11.301coord: 240..270
score: 8
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 139..314
score: 1.3E-8coord: 350..374
score: 1.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 19..448
score:
NoneNo IPR availablePANTHERPTHR24015:SF712SUBFAMILY NOT NAMEDcoord: 19..448
score:
NoneNo IPR availableunknownSSF81901HCP-likecoord: 242..374
score: 9.1

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG01G004060Cla011587Watermelon (97103) v1wcgwmB142
ClCG01G004060Cla97C01G004240Watermelon (97103) v2wcgwmbB089
The following gene(s) are paralogous to this gene:

None