BLAST of ClCG01G004060 vs. Swiss-Prot
Match:
PP284_ARATH (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1)
HSP 1 Score: 709.5 bits (1830), Expect = 2.9e-203
Identity = 347/579 (59.93%), Postives = 439/579 (75.82%), Query Frame = 1
Query: 3 KEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF- 62
K + I+ +LQGCN++ KLRKIH+HVI++GL+ H +I N LL FCA+SV+GSL++AQLLF
Sbjct: 4 KARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFD 63
Query: 63 HQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAE 122
H + P T WN +IRGF+ SSSP+ +I+FYNRM+ +S S PD FTF+F LK+CERIK+
Sbjct: 64 HFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSI 123
Query: 123 RKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCF 182
KC E+HGSVIR G+ D IV T+LV+CYS GSV A +VFDEMP RDLV+WN MI CF
Sbjct: 124 PKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCF 183
Query: 183 SQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSL 242
S GLH ++L Y +M +E V D +TLV L+SSCAH+ ALN+GV +HR A + +
Sbjct: 184 SHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCV 243
Query: 243 YVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEA 302
+V NALIDMYAKCGSL+ AI +F+ M+K+D+ TWNSMI+GYGVHG G EAI F++M+ +
Sbjct: 244 FVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS 303
Query: 303 RMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEK 362
++PN+ITFLGLL GCSHQGLV+EGV++F +MSS+F L P VKHYGC+VDLYGRAG+LE
Sbjct: 304 GVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLEN 363
Query: 363 ALEIV-SNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 422
+LE++ ++S DPVLWR LLGSCKIH+N+ +GE+AM L +L A NAGD +L+ +IY+
Sbjct: 364 SLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSA 423
Query: 423 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 482
ND A MRK+I+ ++T PGWSWIEI DQVHKFVVDDK H S +Y +L EVI++
Sbjct: 424 ANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINR 483
Query: 483 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 542
A L GY ++S + LS L ++ T HSEKLAIA+GL R + GT +RI KNLRVCR
Sbjct: 484 AILAGYKPEDSNRTAPTLS-DRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCR 543
Query: 543 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
DCHSF K VS AFNREIIVRDRVRFHHF G CSCNDYW
Sbjct: 544 DCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
BLAST of ClCG01G004060 vs. Swiss-Prot
Match:
PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2)
HSP 1 Score: 447.6 bits (1150), Expect = 2.1e-124
Identity = 237/579 (40.93%), Postives = 356/579 (61.49%), Query Frame = 1
Query: 8 ITLLQ--GCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGS--LAYAQLLFHQ 67
I LLQ G +++ KLR+IHA I G+ A K L F +S+ ++YA +F +
Sbjct: 19 INLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSK 78
Query: 68 MACP-QTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAER 127
+ P WN++IRG+A+ + I A Y M + PDT T+ F++KA + R
Sbjct: 79 IEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138
Query: 128 KCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFS 187
+ +H VIR G+ + V +L+ Y+ G V SA +VFD+MP +DLVAWN++I+ F+
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 188 QQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLY 247
+ G E+L Y +M S+ + DGFT+V L+S+CA +GAL +G ++H + + GL ++L+
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 258
Query: 248 VGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEAR 307
N L+D+YA+CG +++A +FD M K+ +W S+IVG V+G G EAI F+ M
Sbjct: 259 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318
Query: 308 -MQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEK 367
+ P ITF+G+L CSH G+V+EG +YF M E+++ P ++H+GC+VDL RAG+++K
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378
Query: 368 ALE-IVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 427
A E I S Q + V+WR LLG+C +H + + E A + +L ++GD +LL+ +YA
Sbjct: 379 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYAS 438
Query: 428 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 487
+ + V ++RK + R G+K PG S +E+ ++VH+F++ DKSH S +Y KL+E+ +
Sbjct: 439 EQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGR 498
Query: 488 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 547
GYV IS++ V E + + YHSEK+AIAF L + + I +VKNLRVC
Sbjct: 499 LRSEGYV--PQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 558
Query: 548 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
DCH IK VS +NREI+VRDR RFHHF G CSC DYW
Sbjct: 559 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of ClCG01G004060 vs. Swiss-Prot
Match:
PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2)
HSP 1 Score: 420.6 bits (1080), Expect = 2.7e-116
Identity = 223/574 (38.85%), Postives = 344/574 (59.93%), Query Frame = 1
Query: 8 ITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAIS-VSGSLAYAQLLFHQMAC 67
I L+ CN+L +L +I A+ I S + D V+ KL+NFC S S++YA+ LF M+
Sbjct: 33 ILLISKCNSLRELMQIQAYAIKSHIED-VSFVAKLINFCTESPTESSMSYARHLFEAMSE 92
Query: 68 PQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAERKCKE 127
P +NS+ RG+++ ++P+E + ++ PD +TF +LKAC KA + ++
Sbjct: 93 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGIL-PDNYTFPSLLKACAVAKALEEGRQ 152
Query: 128 VHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGL 187
+H ++ G D +V VC L+ Y+ V SA+ VFD + +V +NAMI+ ++++
Sbjct: 153 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 212
Query: 188 HLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNA 247
E+L + +M+ + + + TL+ ++SSCA LG+L++G +H++A++ + + V A
Sbjct: 213 PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTA 272
Query: 248 LIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPN 307
LIDM+AKCGSLD A+ IF++M+ KD W++MIV Y HG+ +++ F++M +QP+
Sbjct: 273 LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPD 332
Query: 308 SITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIV 367
ITFLGLL CSH G V+EG KYF M S+F + P +KHYG +VDL RAG LE A E +
Sbjct: 333 EITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFI 392
Query: 368 SN-SSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAGKNDTA 427
P+LWRILL +C H N+ + E + EL ++ GD ++L+ +YA
Sbjct: 393 DKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWE 452
Query: 428 GVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFG 487
V +RK++K + PG S IE+ + VH+F D + +++ L E++ + L G
Sbjct: 453 YVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSG 512
Query: 488 YVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSF 547
YV D S+ ++ E + + YHSEKLAI FGL GT IR+VKNLRVCRDCH+
Sbjct: 513 YVPDTSMVVHANMNDQEK-EITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNA 572
Query: 548 IKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
K +S F R++++RD RFHHF G+CSC D+W
Sbjct: 573 AKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
BLAST of ClCG01G004060 vs. Swiss-Prot
Match:
PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1)
HSP 1 Score: 416.0 bits (1068), Expect = 6.7e-115
Identity = 229/630 (36.35%), Postives = 362/630 (57.46%), Query Frame = 1
Query: 2 SKEKAIITLLQGCNNLNKLRKIHAHVIVSG-LRDHVAIGNKLLNFCAISV--SGSLAYAQ 61
S ++ + C + L +IHA I SG +RD +A ++L FCA S L YA
Sbjct: 21 SHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAA-EILRFCATSDLHHRDLDYAH 80
Query: 62 LLFHQMACPQTEAWNSIIRGFAQSSSP--IEAIVFYNRMISASFSSPDTFTFSFVLKACE 121
+F+QM +WN+IIRGF++S + AI + M+S F P+ FTF VLKAC
Sbjct: 81 KIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACA 140
Query: 122 RIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVC------------------- 181
+ ++ K++HG ++ G+ GD V +NLV+ Y + G +
Sbjct: 141 KTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMT 200
Query: 182 --------------------------SAQQVFDEMPARDLVAWNAMISCFSQQGLHLESL 241
+A+ +FD+M R +V+WN MIS +S G +++
Sbjct: 201 DRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAV 260
Query: 242 ETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMY 301
E + +M+ ++ + TLV ++ + + LG+L +G +H +A + G+ +G+ALIDMY
Sbjct: 261 EVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMY 320
Query: 302 AKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPNSITFL 361
+KCG +++AI +F+R+ ++++ TW++MI G+ +HG+ +AI CF +M +A ++P+ + ++
Sbjct: 321 SKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYI 380
Query: 362 GLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSS- 421
LL CSH GLV+EG +YF M S L P ++HYGC+VDL GR+G L++A E + N
Sbjct: 381 NLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPI 440
Query: 422 QNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAGKNDTAGVARM 481
+ D V+W+ LLG+C++ NV +G+ N L ++ ++G + L+ +YA + + + V+ M
Sbjct: 441 KPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEM 500
Query: 482 RKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDE 541
R +K + I+ PG S I+I+ +H+FVV+D SH + E+ L E+ + L GY
Sbjct: 501 RLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY---R 560
Query: 542 SISSLDVLSTTETLKTSCT-YHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAV 580
I++ +L+ E K + YHSEK+A AFGL S G IRIVKNLR+C DCHS IK +
Sbjct: 561 PITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLI 620
BLAST of ClCG01G004060 vs. Swiss-Prot
Match:
PPR71_ARATH (Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana GN=PCMP-H68 PE=2 SV=2)
HSP 1 Score: 412.9 bits (1060), Expect = 5.7e-114
Identity = 217/582 (37.29%), Postives = 339/582 (58.25%), Query Frame = 1
Query: 9 TLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQ 68
T++Q C + ++++++ +H + +G + ++LL CAIS G L++A +F + P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 69 TEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSP-----DTFTFSFVLKACERIKAERK 128
T WN+IIRGFA SS P A +Y M+ S SS D T SF LKAC R
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 129 CKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQ 188
++H + R G D ++CT L+ YS G + SA ++FDEMP RD+ +WNA+I+
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187
Query: 189 QGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQM-HRFAREKGLVQSLY 248
E++E Y +M +E + T+V + +C+HLG + G + H ++ + ++
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSND-----NVI 247
Query: 249 VGNALIDMYAKCGSLDQAILIFDRMQ-KKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEA 308
V NA IDMY+KCG +D+A +F++ KK + TWN+MI G+ VHG A+ F ++ +
Sbjct: 248 VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDN 307
Query: 309 RMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEK 368
++P+ +++L L C H GLV+ G+ F+ M+ + + +KHYGC+VDL RAG+L +
Sbjct: 308 GIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLRE 367
Query: 369 ALEIVSNSSQ-NDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 428
A +I+ + S DPVLW+ LLG+ +I+ +V + EIA + E+G N GD +LL+ +YA
Sbjct: 368 AHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAA 427
Query: 429 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 488
+ V R+R ++ + +K PG S+IE + +H+F DKSH E+YEK+ E+ +
Sbjct: 428 QGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFK 487
Query: 489 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARI---SDGTQIRIVKNLR 548
GYV + D+ E + + YHSEKLA+A+GL + + + +R++ NLR
Sbjct: 488 IREDGYVAQTGLVLHDI--GEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLR 547
Query: 549 VCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
+C DCH K +S + REIIVRDRVRFH F G CSC D+W
Sbjct: 548 ICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
BLAST of ClCG01G004060 vs. TrEMBL
Match:
A0A0A0LH20_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074120 PE=4 SV=1)
HSP 1 Score: 1069.7 bits (2765), Expect = 1.3e-309
Identity = 522/579 (90.16%), Postives = 547/579 (94.47%), Query Frame = 1
Query: 1 MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLL 60
MS EKAI+ LLQGCN+L +LRKIHAHVIVSGL HV I NKLLNFCAISVSGSLAYAQLL
Sbjct: 1 MSNEKAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLL 60
Query: 61 FHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKA 120
FHQM CPQTEAWNSIIRGFAQSSSPI+AIVFYN+M+ SFS PDTFTFSFVLKACERIKA
Sbjct: 61 FHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKA 120
Query: 121 ERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISC 180
ERKCKEVHGSVIRCGYD DVIVCTNLVKCYS MGSVC A+QVFD+MPARDLVAWNAMISC
Sbjct: 121 ERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISC 180
Query: 181 FSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQS 240
FSQQGLH E+L+TYNQMRSENVD+DGFTLVGLISSCAHLGALNIGVQMHRFARE GL QS
Sbjct: 181 FSQQGLHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQS 240
Query: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300
LYVGNALIDMYAKCGSLDQAILIFDRMQ+KDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
Sbjct: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300
Query: 301 ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLE 360
AR+QPN +TFLGLLCGCSHQGLVQEGVKYF+LMSS+FRL+PEVKHYGCLVDLYGRAGKL+
Sbjct: 301 ARIQPNPVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLD 360
Query: 361 KALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 420
KALEIVSNSS ND VLWRILLGSCKIHKNVTIGEIAMN L ELGAT+AGDCILLATIYAG
Sbjct: 361 KALEIVSNSSHNDSVLWRILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAG 420
Query: 421 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 480
+ D AGVARMRKMIK QG KTTPGWSWIEI +QVHKFVVDDKSHRYS+EVYEKLREVIHQ
Sbjct: 421 EKDKAGVARMRKMIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQ 480
Query: 481 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 540
AS FGYVGDESISSLD+LST ETLKTSCTYHSEKLAIAFGLAR +DGTQIRIVKNLRVCR
Sbjct: 481 ASFFGYVGDESISSLDMLSTMETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVCR 540
Query: 541 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
DCHSFIKAVS AFNREIIVRDRVRFHHF GG+CSCNDYW
Sbjct: 541 DCHSFIKAVSVAFNREIIVRDRVRFHHFKGGECSCNDYW 579
BLAST of ClCG01G004060 vs. TrEMBL
Match:
B9IHK4_POPTR (Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POPTR_0016s02930g PE=4 SV=2)
HSP 1 Score: 837.0 bits (2161), Expect = 1.4e-239
Identity = 402/579 (69.43%), Postives = 481/579 (83.07%), Query Frame = 1
Query: 2 SKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF 61
SK AI+T+LQGCNNL +L+KI AHVIV+GL++H AI N +LNFCA+S+SGSL YAQ LF
Sbjct: 7 SKANAILTVLQGCNNLTRLKKIQAHVIVNGLQNHPAISNSILNFCAVSISGSLPYAQHLF 66
Query: 62 HQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAE 121
+ PQT+AWNSIIRGFAQS SP++AI +YNRM+ S S PDTFTFSF LKACERIKA
Sbjct: 67 RHILNPQTQAWNSIIRGFAQSPSPVQAIFYYNRMLFDSVSGPDTFTFSFTLKACERIKAL 126
Query: 122 RKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCF 181
+KC+EVHGS+IR GY+ DV+VCT LV+CY G V A+ VFD MP RDLVAWNAMISC+
Sbjct: 127 KKCEEVHGSIIRTGYERDVVVCTGLVRCYGRNGCVEIARMVFDNMPERDLVAWNAMISCY 186
Query: 182 SQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSL 241
SQ G H E+L Y+ MR+ENV VDGFTLVGL+SSC+H+GALN+GV++HR A EKGL++++
Sbjct: 187 SQAGYHQEALRVYDYMRNENVGVDGFTLVGLLSSCSHVGALNMGVKLHRIASEKGLLRNV 246
Query: 242 YVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEA 301
+VGNALIDMYAKCGSLD A+ +F+ M +D+FTWNSMIVG+GVHG G EAIY F QMLEA
Sbjct: 247 FVGNALIDMYAKCGSLDGALEVFNGM-PRDVFTWNSMIVGFGVHGFGDEAIYFFNQMLEA 306
Query: 302 RMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEK 361
++PNSI FLGLLCGCSHQGLV+EGV++FH MSS+F ++P +KHYGC+VD+YGRAGKLEK
Sbjct: 307 GVRPNSIAFLGLLCGCSHQGLVEEGVEFFHQMSSKFNVKPGIKHYGCMVDMYGRAGKLEK 366
Query: 362 ALEIVSNSS-QNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 421
ALEI+ +S Q+DPVLWRILL S KIHKNV IGEIAM +L +LGA NAGDC+LLATIYAG
Sbjct: 367 ALEIIGDSPWQDDPVLWRILLSSSKIHKNVVIGEIAMRNLSQLGAVNAGDCVLLATIYAG 426
Query: 422 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 481
ND GVARMRK+IK+QGIKTTPGWSWIE+ DQVH+FVVDDKSH S +Y+KL EV H+
Sbjct: 427 ANDEQGVARMRKLIKKQGIKTTPGWSWIEVSDQVHRFVVDDKSHPDSGMIYQKLEEVTHK 486
Query: 482 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 541
A++ GYV D+S + E L++S TYHSEKLAIAFGLA+ +GT +RIVKNLRVCR
Sbjct: 487 ATMAGYVEDKSQFIFHGSCSEECLESSSTYHSEKLAIAFGLAKTPEGTSLRIVKNLRVCR 546
Query: 542 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
DCH F K VS AFNR+IIVRDR+RFHHF GG CSC DYW
Sbjct: 547 DCHEFTKFVSRAFNRDIIVRDRLRFHHFKGGLCSCRDYW 584
BLAST of ClCG01G004060 vs. TrEMBL
Match:
F6I4J1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00200 PE=4 SV=1)
HSP 1 Score: 804.7 bits (2077), Expect = 7.5e-230
Identity = 386/584 (66.10%), Postives = 481/584 (82.36%), Query Frame = 1
Query: 1 MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLL 60
M+ +AI++LLQGCN++ KL KIHAH++++G + + +I KLLNFCA+SVSGSLAYAQL+
Sbjct: 1 MANARAILSLLQGCNSMRKLHKIHAHILINGYQHNPSISEKLLNFCAVSVSGSLAYAQLV 60
Query: 61 FHQMACPQTEAWNSIIRGFAQSSSPIE--AIVFYNRMISASFSSPDTFTFSFVLKACERI 120
FH++ PQT AWNS+IRGF+QS SP++ AIVFYN M+SAS + PDT+TFSF+LKACE
Sbjct: 61 FHRIHNPQTPAWNSMIRGFSQSPSPLQLQAIVFYNHMLSASHARPDTYTFSFLLKACEEA 120
Query: 121 KAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMI 180
K E KC+EVHG +IR GYD DV++CTNL++ Y+ G + +A +VF+EMPARDLV+WN+MI
Sbjct: 121 KEEGKCREVHGFIIRFGYDQDVVLCTNLIRSYAGNGLIETAHKVFEEMPARDLVSWNSMI 180
Query: 181 SCFSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLV 240
SC+ Q GLH E+L+ Y+QMR NV DGFTLV L+SSCAH+GAL++GVQMHRFA E+ LV
Sbjct: 181 SCYCQTGLHEEALKMYDQMRISNVGFDGFTLVSLLSSCAHVGALHMGVQMHRFAGERRLV 240
Query: 241 QSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQM 300
++++VGNALIDMYAKCGSL A+ IF+ M K+D+FTWNSMIVGYGVHGRG EAI F M
Sbjct: 241 ENIFVGNALIDMYAKCGSLASALSIFNSMPKRDVFTWNSMIVGYGVHGRGDEAITFFGSM 300
Query: 301 LEARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGK 360
L A ++PNSITFLGLLCGCSHQGLV+EGV+YFH+MSSEF L+P +KHYGC+VDL+GRAGK
Sbjct: 301 LMAGVRPNSITFLGLLCGCSHQGLVKEGVQYFHMMSSEFNLKPGIKHYGCMVDLFGRAGK 360
Query: 361 LEKALEIV-SNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATI 420
L++ALE++ S+ SQ+DPVLWR LLGSCKIH+NV IGE+AM +L +LG+ AGDC+LL+ I
Sbjct: 361 LKEALEVIRSSPSQHDPVLWRTLLGSCKIHRNVEIGEMAMRNLVQLGSLGAGDCVLLSGI 420
Query: 421 YAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREV 480
YA D GVARMRK+I+ +GIKTTPGWSWIE+ DQVH+FVVDDKSH S E+Y KL EV
Sbjct: 421 YAEAKDLQGVARMRKLIQSRGIKTTPGWSWIEVGDQVHRFVVDDKSHPDSREIYRKLEEV 480
Query: 481 IHQASLFGYVGDESISSLDVLSTTETL--KTSCTYHSEKLAIAFGLARISDGTQIRIVKN 540
IH+ASL GY +ES S T+ +TS +YHSEKLAIA+GLAR +GT + IVKN
Sbjct: 481 IHRASLVGYAMEESSLVAAPESNTQEYCWETSTSYHSEKLAIAYGLARTPEGTSLLIVKN 540
Query: 541 LRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
LRVCRDCH+F K VS AF+REIIVRDRVRFHHF GG CSC ++W
Sbjct: 541 LRVCRDCHNFTKFVSMAFDREIIVRDRVRFHHFKGGHCSCKEFW 584
BLAST of ClCG01G004060 vs. TrEMBL
Match:
M5WNK1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017094mg PE=4 SV=1)
HSP 1 Score: 803.9 bits (2075), Expect = 1.3e-229
Identity = 394/583 (67.58%), Postives = 480/583 (82.33%), Query Frame = 1
Query: 2 SKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF 61
SK KAI+ LLQGCN+L +L+KIHA+VI +GL+ AI NKLLNFCA+SVSG LAYAQLLF
Sbjct: 19 SKAKAILALLQGCNSLIRLKKIHAYVITNGLQHQTAISNKLLNFCAVSVSGCLAYAQLLF 78
Query: 62 HQ-MACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMIS-ASFSSPDTFTFSFVLKACERIK 121
H + PQT+ WNS+IRGF+QS SP++AI +YN M+S AS S PDTFTFSFVLKACE++K
Sbjct: 79 HHHIQNPQTQDWNSMIRGFSQSPSPLQAIFYYNHMLSSASDSCPDTFTFSFVLKACEKVK 138
Query: 122 AERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMIS 181
A+ KCKE DV+VCTNL++ YS GS+ +AQ+VFD M RDLV+WN+MIS
Sbjct: 139 AQTKCKE-----------NDVVVCTNLIRSYSCNGSIDTAQRVFDNMLERDLVSWNSMIS 198
Query: 182 CFSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQ 241
C+SQ+G H E+L TYN MR ENV +DGFTLVGL+SSCAHLGALN GV +HR AREKGL+
Sbjct: 199 CYSQRGFHHEALSTYNLMRKENVGLDGFTLVGLLSSCAHLGALNTGVTVHRIAREKGLLG 258
Query: 242 SLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQML 301
++YVGNALIDMYAKCG+LD A+ +F+RMQ +D+FTWNSMIVGYGVHGRG E+I F QML
Sbjct: 259 NVYVGNALIDMYAKCGNLDSALSVFERMQNRDVFTWNSMIVGYGVHGRGDESISFFGQML 318
Query: 302 EARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKL 361
A ++PNSITFLGLLCGCSHQGLV++GV+YF++MS +F ++P +KHYGCLVDL+GRAG L
Sbjct: 319 MAGVRPNSITFLGLLCGCSHQGLVEKGVEYFNVMSFKFNIKPGIKHYGCLVDLFGRAGML 378
Query: 362 EKALEIVSNS-SQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIY 421
+KAL+++ S +Q+DPVLWR LLGSCKIHKNV IGEIAM +L +LG++NAGD +LLATIY
Sbjct: 379 KKALQVIRTSRAQDDPVLWRTLLGSCKIHKNVEIGEIAMRNLIQLGSSNAGDYVLLATIY 438
Query: 422 AGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVI 481
+ D GVARMRK+IK QG+KTTPGWSWIEI DQVHKFVVDDKSH + E+Y+KLR V+
Sbjct: 439 FREKDADGVARMRKLIKTQGVKTTPGWSWIEIGDQVHKFVVDDKSHPDANEIYQKLRVVV 498
Query: 482 HQASLFGYVGDESISSLDVLSTTET--LKTSCTYHSEKLAIAFGLARISDGTQIRIVKNL 541
HQA+L GYV + S+ ++ ++T+T L+TS + H EKLAIAFGLAR +GT +RIVKNL
Sbjct: 499 HQAALHGYVQEGSLITVSEFNSTDTDCLETSGSCHGEKLAIAFGLARTPEGTCLRIVKNL 558
Query: 542 RVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
RVCRDCHSF K VS AFNREI+VRDRVRFHHF GG CSC DYW
Sbjct: 559 RVCRDCHSFTKFVSQAFNREIVVRDRVRFHHFKGGLCSCKDYW 590
BLAST of ClCG01G004060 vs. TrEMBL
Match:
W9QXM0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022672 PE=4 SV=1)
HSP 1 Score: 782.7 bits (2020), Expect = 3.1e-223
Identity = 383/584 (65.58%), Postives = 468/584 (80.14%), Query Frame = 1
Query: 2 SKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF 61
SK K I+ LLQGCN+L KLRKIHA VI +GL+ H AI KLL+FCA+SVSGSL YA LLF
Sbjct: 12 SKAKTILKLLQGCNSLKKLRKIHAFVITNGLQHHPAISTKLLHFCAVSVSGSLPYAVLLF 71
Query: 62 -HQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSS----PDTFTFSFVLKACE 121
H + PQT+ WNSIIRGF+QS +P++AI +YN M+ A+ + PD++TFSF+L+A E
Sbjct: 72 RHHILNPQTDDWNSIIRGFSQSPNPLKAIFYYNDMVLAADKNFDCRPDSYTFSFLLRASE 131
Query: 122 RIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNA 181
R KAERKC+EVHGS+IR GY+ DV+VCTNLVK Y G V +A++VFDEMP +DLV+WN+
Sbjct: 132 RTKAERKCREVHGSIIRRGYEADVVVCTNLVKSYCGNGLVETARKVFDEMPVKDLVSWNS 191
Query: 182 MISCFSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKG 241
MI C+SQ G H E+L TY+ MR+ENV VDGFTLVGL+SSCAH+GA NIGV+MHR A ++
Sbjct: 192 MILCYSQAGFHHEALRTYDLMRNENVGVDGFTLVGLLSSCAHVGAQNIGVEMHRMACKRE 251
Query: 242 LVQSLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQ 301
+++++VGNALI+MYAKCG+LD A +FD M K+D+ TWNSM+VGYG HG G EAI F+
Sbjct: 252 FLRNVFVGNALINMYAKCGNLDAARSVFDSMIKRDVLTWNSMVVGYGGHGLGKEAIEFFE 311
Query: 302 QMLEARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRA 361
+ML A PNSITFLGLLCGC+HQGLV+EGV+YFH M+S++ ++P +KHYGCLVDL+GRA
Sbjct: 312 KMLMAGFHPNSITFLGLLCGCNHQGLVEEGVEYFHRMTSKYNIKPGIKHYGCLVDLFGRA 371
Query: 362 GKLEKALEIVSN-SSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLA 421
GKLEKALE++ N SQ+DPVLWR LL SCKIHKNV +GEIAM SL ++GA+NAGDCILLA
Sbjct: 372 GKLEKALEVIKNCPSQHDPVLWRTLLSSCKIHKNVEMGEIAMRSLVQVGASNAGDCILLA 431
Query: 422 TIYAGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLR 481
+IY G N+ GVARMRKMIK GI+TTPGWSWIE+ DQVHKFVVDDKSH ++ E+Y KLR
Sbjct: 432 SIYQGVNNVDGVARMRKMIKSWGIRTTPGWSWIEVADQVHKFVVDDKSHPHTNEIYNKLR 491
Query: 482 EVIHQASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKN 541
EVIH S GYV + + ++ +YHSEKLAIAFG+AR +GT +RIVKN
Sbjct: 492 EVIHVLSQLGYVEEGFWGT-----------STSSYHSEKLAIAFGIARTPEGTCLRIVKN 551
Query: 542 LRVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
LRVC DCHSF K VS AFNREI+VRDRVRFHHF GG CSCNDYW
Sbjct: 552 LRVCGDCHSFTKFVSKAFNREIVVRDRVRFHHFKGGLCSCNDYW 584
BLAST of ClCG01G004060 vs. TAIR10
Match:
AT3G56550.1 (AT3G56550.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 709.5 bits (1830), Expect = 1.7e-204
Identity = 347/579 (59.93%), Postives = 439/579 (75.82%), Query Frame = 1
Query: 3 KEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF- 62
K + I+ +LQGCN++ KLRKIH+HVI++GL+ H +I N LL FCA+SV+GSL++AQLLF
Sbjct: 4 KARVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFD 63
Query: 63 HQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAE 122
H + P T WN +IRGF+ SSSP+ +I+FYNRM+ +S S PD FTF+F LK+CERIK+
Sbjct: 64 HFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSI 123
Query: 123 RKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCF 182
KC E+HGSVIR G+ D IV T+LV+CYS GSV A +VFDEMP RDLV+WN MI CF
Sbjct: 124 PKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCF 183
Query: 183 SQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSL 242
S GLH ++L Y +M +E V D +TLV L+SSCAH+ ALN+GV +HR A + +
Sbjct: 184 SHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCV 243
Query: 243 YVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEA 302
+V NALIDMYAKCGSL+ AI +F+ M+K+D+ TWNSMI+GYGVHG G EAI F++M+ +
Sbjct: 244 FVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS 303
Query: 303 RMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEK 362
++PN+ITFLGLL GCSHQGLV+EGV++F +MSS+F L P VKHYGC+VDLYGRAG+LE
Sbjct: 304 GVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLEN 363
Query: 363 ALEIV-SNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 422
+LE++ ++S DPVLWR LLGSCKIH+N+ +GE+AM L +L A NAGD +L+ +IY+
Sbjct: 364 SLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSA 423
Query: 423 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 482
ND A MRK+I+ ++T PGWSWIEI DQVHKFVVDDK H S +Y +L EVI++
Sbjct: 424 ANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINR 483
Query: 483 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 542
A L GY ++S + LS L ++ T HSEKLAIA+GL R + GT +RI KNLRVCR
Sbjct: 484 AILAGYKPEDSNRTAPTLS-DRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCR 543
Query: 543 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
DCHSF K VS AFNREIIVRDRVRFHHF G CSCNDYW
Sbjct: 544 DCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
BLAST of ClCG01G004060 vs. TAIR10
Match:
AT4G21065.1 (AT4G21065.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 447.6 bits (1150), Expect = 1.2e-125
Identity = 237/579 (40.93%), Postives = 356/579 (61.49%), Query Frame = 1
Query: 8 ITLLQ--GCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGS--LAYAQLLFHQ 67
I LLQ G +++ KLR+IHA I G+ A K L F +S+ ++YA +F +
Sbjct: 19 INLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSK 78
Query: 68 MACP-QTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAER 127
+ P WN++IRG+A+ + I A Y M + PDT T+ F++KA + R
Sbjct: 79 IEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVR 138
Query: 128 KCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFS 187
+ +H VIR G+ + V +L+ Y+ G V SA +VFD+MP +DLVAWN++I+ F+
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 188 QQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLY 247
+ G E+L Y +M S+ + DGFT+V L+S+CA +GAL +G ++H + + GL ++L+
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 258
Query: 248 VGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEAR 307
N L+D+YA+CG +++A +FD M K+ +W S+IVG V+G G EAI F+ M
Sbjct: 259 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318
Query: 308 -MQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEK 367
+ P ITF+G+L CSH G+V+EG +YF M E+++ P ++H+GC+VDL RAG+++K
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKK 378
Query: 368 ALE-IVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 427
A E I S Q + V+WR LLG+C +H + + E A + +L ++GD +LL+ +YA
Sbjct: 379 AYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYAS 438
Query: 428 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 487
+ + V ++RK + R G+K PG S +E+ ++VH+F++ DKSH S +Y KL+E+ +
Sbjct: 439 EQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGR 498
Query: 488 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 547
GYV IS++ V E + + YHSEK+AIAF L + + I +VKNLRVC
Sbjct: 499 LRSEGYV--PQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCA 558
Query: 548 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
DCH IK VS +NREI+VRDR RFHHF G CSC DYW
Sbjct: 559 DCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
BLAST of ClCG01G004060 vs. TAIR10
Match:
AT2G02980.1 (AT2G02980.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 420.6 bits (1080), Expect = 1.5e-117
Identity = 223/574 (38.85%), Postives = 344/574 (59.93%), Query Frame = 1
Query: 8 ITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAIS-VSGSLAYAQLLFHQMAC 67
I L+ CN+L +L +I A+ I S + D V+ KL+NFC S S++YA+ LF M+
Sbjct: 33 ILLISKCNSLRELMQIQAYAIKSHIED-VSFVAKLINFCTESPTESSMSYARHLFEAMSE 92
Query: 68 PQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAERKCKE 127
P +NS+ RG+++ ++P+E + ++ PD +TF +LKAC KA + ++
Sbjct: 93 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGIL-PDNYTFPSLLKACAVAKALEEGRQ 152
Query: 128 VHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQQGL 187
+H ++ G D +V VC L+ Y+ V SA+ VFD + +V +NAMI+ ++++
Sbjct: 153 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 212
Query: 188 HLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNA 247
E+L + +M+ + + + TL+ ++SSCA LG+L++G +H++A++ + + V A
Sbjct: 213 PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTA 272
Query: 248 LIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPN 307
LIDM+AKCGSLD A+ IF++M+ KD W++MIV Y HG+ +++ F++M +QP+
Sbjct: 273 LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPD 332
Query: 308 SITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIV 367
ITFLGLL CSH G V+EG KYF M S+F + P +KHYG +VDL RAG LE A E +
Sbjct: 333 EITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFI 392
Query: 368 SN-SSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAGKNDTA 427
P+LWRILL +C H N+ + E + EL ++ GD ++L+ +YA
Sbjct: 393 DKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWE 452
Query: 428 GVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFG 487
V +RK++K + PG S IE+ + VH+F D + +++ L E++ + L G
Sbjct: 453 YVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSG 512
Query: 488 YVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSF 547
YV D S+ ++ E + + YHSEKLAI FGL GT IR+VKNLRVCRDCH+
Sbjct: 513 YVPDTSMVVHANMNDQEK-EITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNA 572
Query: 548 IKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
K +S F R++++RD RFHHF G+CSC D+W
Sbjct: 573 AKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
BLAST of ClCG01G004060 vs. TAIR10
Match:
AT5G48910.1 (AT5G48910.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 416.0 bits (1068), Expect = 3.8e-116
Identity = 229/630 (36.35%), Postives = 362/630 (57.46%), Query Frame = 1
Query: 2 SKEKAIITLLQGCNNLNKLRKIHAHVIVSG-LRDHVAIGNKLLNFCAISV--SGSLAYAQ 61
S ++ + C + L +IHA I SG +RD +A ++L FCA S L YA
Sbjct: 21 SHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAA-EILRFCATSDLHHRDLDYAH 80
Query: 62 LLFHQMACPQTEAWNSIIRGFAQSSSP--IEAIVFYNRMISASFSSPDTFTFSFVLKACE 121
+F+QM +WN+IIRGF++S + AI + M+S F P+ FTF VLKAC
Sbjct: 81 KIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACA 140
Query: 122 RIKAERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVC------------------- 181
+ ++ K++HG ++ G+ GD V +NLV+ Y + G +
Sbjct: 141 KTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMT 200
Query: 182 --------------------------SAQQVFDEMPARDLVAWNAMISCFSQQGLHLESL 241
+A+ +FD+M R +V+WN MIS +S G +++
Sbjct: 201 DRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAV 260
Query: 242 ETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSLYVGNALIDMY 301
E + +M+ ++ + TLV ++ + + LG+L +G +H +A + G+ +G+ALIDMY
Sbjct: 261 EVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMY 320
Query: 302 AKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEARMQPNSITFL 361
+KCG +++AI +F+R+ ++++ TW++MI G+ +HG+ +AI CF +M +A ++P+ + ++
Sbjct: 321 SKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYI 380
Query: 362 GLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEKALEIVSNSS- 421
LL CSH GLV+EG +YF M S L P ++HYGC+VDL GR+G L++A E + N
Sbjct: 381 NLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPI 440
Query: 422 QNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAGKNDTAGVARM 481
+ D V+W+ LLG+C++ NV +G+ N L ++ ++G + L+ +YA + + + V+ M
Sbjct: 441 KPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEM 500
Query: 482 RKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQASLFGYVGDE 541
R +K + I+ PG S I+I+ +H+FVV+D SH + E+ L E+ + L GY
Sbjct: 501 RLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY---R 560
Query: 542 SISSLDVLSTTETLKTSCT-YHSEKLAIAFGLARISDGTQIRIVKNLRVCRDCHSFIKAV 580
I++ +L+ E K + YHSEK+A AFGL S G IRIVKNLR+C DCHS IK +
Sbjct: 561 PITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLI 620
BLAST of ClCG01G004060 vs. TAIR10
Match:
AT1G34160.1 (AT1G34160.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 412.9 bits (1060), Expect = 3.2e-115
Identity = 217/582 (37.29%), Postives = 339/582 (58.25%), Query Frame = 1
Query: 9 TLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLFHQMACPQ 68
T++Q C + ++++++ +H + +G + ++LL CAIS G L++A +F + P
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPL 67
Query: 69 TEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSP-----DTFTFSFVLKACERIKAERK 128
T WN+IIRGFA SS P A +Y M+ S SS D T SF LKAC R
Sbjct: 68 TNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSA 127
Query: 129 CKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCFSQ 188
++H + R G D ++CT L+ YS G + SA ++FDEMP RD+ +WNA+I+
Sbjct: 128 MDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVS 187
Query: 189 QGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQM-HRFAREKGLVQSLY 248
E++E Y +M +E + T+V + +C+HLG + G + H ++ + ++
Sbjct: 188 GNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSND-----NVI 247
Query: 249 VGNALIDMYAKCGSLDQAILIFDRMQ-KKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEA 308
V NA IDMY+KCG +D+A +F++ KK + TWN+MI G+ VHG A+ F ++ +
Sbjct: 248 VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDN 307
Query: 309 RMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEK 368
++P+ +++L L C H GLV+ G+ F+ M+ + + +KHYGC+VDL RAG+L +
Sbjct: 308 GIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLRE 367
Query: 369 ALEIVSNSSQ-NDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 428
A +I+ + S DPVLW+ LLG+ +I+ +V + EIA + E+G N GD +LL+ +YA
Sbjct: 368 AHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAA 427
Query: 429 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 488
+ V R+R ++ + +K PG S+IE + +H+F DKSH E+YEK+ E+ +
Sbjct: 428 QGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFK 487
Query: 489 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARI---SDGTQIRIVKNLR 548
GYV + D+ E + + YHSEKLA+A+GL + + + +R++ NLR
Sbjct: 488 IREDGYVAQTGLVLHDI--GEEEKENALCYHSEKLAVAYGLMMMDGADEESPVRVINNLR 547
Query: 549 VCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
+C DCH K +S + REIIVRDRVRFH F G CSC D+W
Sbjct: 548 ICGDCHVVFKHISKIYKREIIVRDRVRFHRFKDGSCSCRDFW 581
BLAST of ClCG01G004060 vs. NCBI nr
Match:
gi|449470352|ref|XP_004152881.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Cucumis sativus])
HSP 1 Score: 1069.7 bits (2765), Expect = 1.8e-309
Identity = 522/579 (90.16%), Postives = 547/579 (94.47%), Query Frame = 1
Query: 1 MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLL 60
MS EKAI+ LLQGCN+L +LRKIHAHVIVSGL HV I NKLLNFCAISVSGSLAYAQLL
Sbjct: 1 MSNEKAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLL 60
Query: 61 FHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKA 120
FHQM CPQTEAWNSIIRGFAQSSSPI+AIVFYN+M+ SFS PDTFTFSFVLKACERIKA
Sbjct: 61 FHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKA 120
Query: 121 ERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISC 180
ERKCKEVHGSVIRCGYD DVIVCTNLVKCYS MGSVC A+QVFD+MPARDLVAWNAMISC
Sbjct: 121 ERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISC 180
Query: 181 FSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQS 240
FSQQGLH E+L+TYNQMRSENVD+DGFTLVGLISSCAHLGALNIGVQMHRFARE GL QS
Sbjct: 181 FSQQGLHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQS 240
Query: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300
LYVGNALIDMYAKCGSLDQAILIFDRMQ+KDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
Sbjct: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300
Query: 301 ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLE 360
AR+QPN +TFLGLLCGCSHQGLVQEGVKYF+LMSS+FRL+PEVKHYGCLVDLYGRAGKL+
Sbjct: 301 ARIQPNPVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLD 360
Query: 361 KALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 420
KALEIVSNSS ND VLWRILLGSCKIHKNVTIGEIAMN L ELGAT+AGDCILLATIYAG
Sbjct: 361 KALEIVSNSSHNDSVLWRILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAG 420
Query: 421 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 480
+ D AGVARMRKMIK QG KTTPGWSWIEI +QVHKFVVDDKSHRYS+EVYEKLREVIHQ
Sbjct: 421 EKDKAGVARMRKMIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQ 480
Query: 481 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 540
AS FGYVGDESISSLD+LST ETLKTSCTYHSEKLAIAFGLAR +DGTQIRIVKNLRVCR
Sbjct: 481 ASFFGYVGDESISSLDMLSTMETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVCR 540
Query: 541 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
DCHSFIKAVS AFNREIIVRDRVRFHHF GG+CSCNDYW
Sbjct: 541 DCHSFIKAVSVAFNREIIVRDRVRFHHFKGGECSCNDYW 579
BLAST of ClCG01G004060 vs. NCBI nr
Match:
gi|700206131|gb|KGN61250.1| (hypothetical protein Csa_2G074120 [Cucumis sativus])
HSP 1 Score: 1069.7 bits (2765), Expect = 1.8e-309
Identity = 522/579 (90.16%), Postives = 547/579 (94.47%), Query Frame = 1
Query: 1 MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLL 60
MS EKAI+ LLQGCN+L +LRKIHAHVIVSGL HV I NKLLNFCAISVSGSLAYAQLL
Sbjct: 1 MSNEKAILALLQGCNSLKRLRKIHAHVIVSGLHHHVPIANKLLNFCAISVSGSLAYAQLL 60
Query: 61 FHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKA 120
FHQM CPQTEAWNSIIRGFAQSSSPI+AIVFYN+M+ SFS PDTFTFSFVLKACERIKA
Sbjct: 61 FHQMECPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVCDSFSIPDTFTFSFVLKACERIKA 120
Query: 121 ERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISC 180
ERKCKEVHGSVIRCGYD DVIVCTNLVKCYS MGSVC A+QVFD+MPARDLVAWNAMISC
Sbjct: 121 ERKCKEVHGSVIRCGYDADVIVCTNLVKCYSAMGSVCIARQVFDKMPARDLVAWNAMISC 180
Query: 181 FSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQS 240
FSQQGLH E+L+TYNQMRSENVD+DGFTLVGLISSCAHLGALNIGVQMHRFARE GL QS
Sbjct: 181 FSQQGLHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQS 240
Query: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300
LYVGNALIDMYAKCGSLDQAILIFDRMQ+KDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
Sbjct: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300
Query: 301 ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLE 360
AR+QPN +TFLGLLCGCSHQGLVQEGVKYF+LMSS+FRL+PEVKHYGCLVDLYGRAGKL+
Sbjct: 301 ARIQPNPVTFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLKPEVKHYGCLVDLYGRAGKLD 360
Query: 361 KALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 420
KALEIVSNSS ND VLWRILLGSCKIHKNVTIGEIAMN L ELGAT+AGDCILLATIYAG
Sbjct: 361 KALEIVSNSSHNDSVLWRILLGSCKIHKNVTIGEIAMNRLSELGATSAGDCILLATIYAG 420
Query: 421 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 480
+ D AGVARMRKMIK QG KTTPGWSWIEI +QVHKFVVDDKSHRYS+EVYEKLREVIHQ
Sbjct: 421 EKDKAGVARMRKMIKSQGKKTTPGWSWIEIGEQVHKFVVDDKSHRYSVEVYEKLREVIHQ 480
Query: 481 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 540
AS FGYVGDESISSLD+LST ETLKTSCTYHSEKLAIAFGLAR +DGTQIRIVKNLRVCR
Sbjct: 481 ASFFGYVGDESISSLDMLSTMETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVCR 540
Query: 541 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
DCHSFIKAVS AFNREIIVRDRVRFHHF GG+CSCNDYW
Sbjct: 541 DCHSFIKAVSVAFNREIIVRDRVRFHHFKGGECSCNDYW 579
BLAST of ClCG01G004060 vs. NCBI nr
Match:
gi|659082517|ref|XP_008441882.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Cucumis melo])
HSP 1 Score: 1061.6 bits (2744), Expect = 4.9e-307
Identity = 523/579 (90.33%), Postives = 548/579 (94.65%), Query Frame = 1
Query: 1 MSKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLL 60
MSKEKAI+TLLQGCN+L +LRKIHAHVIVSGL HVAI NKLLNFCAISVSGSLAYAQLL
Sbjct: 1 MSKEKAILTLLQGCNSLKRLRKIHAHVIVSGLHHHVAIANKLLNFCAISVSGSLAYAQLL 60
Query: 61 FHQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKA 120
FHQ PQTEAWNSIIRGFAQSSSPI+AIVFYN+M+ SFS DTFTFSFVLKACERIKA
Sbjct: 61 FHQTEFPQTEAWNSIIRGFAQSSSPIDAIVFYNQMVWDSFSMRDTFTFSFVLKACERIKA 120
Query: 121 ERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISC 180
ERKCKEVHG+VIRCGYD DVIVCTNLVKCYS MGSV A+QVFD+MPARDLVAWNAMISC
Sbjct: 121 ERKCKEVHGTVIRCGYDADVIVCTNLVKCYSAMGSVYIARQVFDKMPARDLVAWNAMISC 180
Query: 181 FSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQS 240
FSQQGLH E+L+TYNQMRSENVD+DGFTLVGLISSCAHLGALNIGVQMHRFARE GL QS
Sbjct: 181 FSQQGLHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLGALNIGVQMHRFARENGLDQS 240
Query: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300
LYVGNALIDMYAKCGSLDQAILIFDRMQ+KDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE
Sbjct: 241 LYVGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLE 300
Query: 301 ARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLE 360
AR+QPNSITFLGLLCGCSHQGLVQEGVKYF+LMSS+FRLRPEVKHYGCLVDLYGRAGKLE
Sbjct: 301 ARIQPNSITFLGLLCGCSHQGLVQEGVKYFNLMSSKFRLRPEVKHYGCLVDLYGRAGKLE 360
Query: 361 KALEIVSNSSQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 420
KALEIVSNSS ND VLWR LLGSCKIHKNVTIGEIAMN L ELGAT+AGDCILLATIYAG
Sbjct: 361 KALEIVSNSSHNDSVLWRTLLGSCKIHKNVTIGEIAMNRLFELGATSAGDCILLATIYAG 420
Query: 421 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 480
+ND AGV+RMRKMIK QGIKTTPGWSWIEI +QVHKFVVDDKS+RYSIEVYEKLREVI+Q
Sbjct: 421 ENDKAGVSRMRKMIKSQGIKTTPGWSWIEIGEQVHKFVVDDKSNRYSIEVYEKLREVIYQ 480
Query: 481 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 540
AS FGYVGDES+SSLDVLST ETLKTSCTYHSEKLAIAFGLAR +DGTQIRIVKNLRVCR
Sbjct: 481 ASFFGYVGDESVSSLDVLSTIETLKTSCTYHSEKLAIAFGLARTADGTQIRIVKNLRVCR 540
Query: 541 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
DCHSFIKAVS AFNREIIVRDRVRFHHF GG+CSCNDYW
Sbjct: 541 DCHSFIKAVSVAFNREIIVRDRVRFHHFKGGKCSCNDYW 579
BLAST of ClCG01G004060 vs. NCBI nr
Match:
gi|645221906|ref|XP_008246339.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Prunus mume])
HSP 1 Score: 840.5 bits (2170), Expect = 1.8e-240
Identity = 403/583 (69.13%), Postives = 493/583 (84.56%), Query Frame = 1
Query: 2 SKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF 61
SK KAI+ LLQGCN+L KL+KIHAHVI +GL+ AI NKLLNFCA+SVSG LAYAQLLF
Sbjct: 19 SKTKAILALLQGCNSLIKLKKIHAHVITNGLQHQPAISNKLLNFCAVSVSGCLAYAQLLF 78
Query: 62 HQ-MACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMIS-ASFSSPDTFTFSFVLKACERIK 121
H + PQT+ WNS+IRGF+QS SP++AI +YN M+S AS S PDTFTFSFVLKAC ++K
Sbjct: 79 HHHIQNPQTQDWNSMIRGFSQSPSPLQAIFYYNHMLSSASDSCPDTFTFSFVLKACVKVK 138
Query: 122 AERKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMIS 181
A+ KCKEVHG+++R GY+ D+++CTNL++ Y+ GS+ +AQ+VFD MP RDLV+WN+MIS
Sbjct: 139 AQTKCKEVHGAMVRYGYENDIVICTNLIRSYACNGSIDTAQRVFDNMPERDLVSWNSMIS 198
Query: 182 CFSQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQ 241
C+SQ+GLH E+L TYN MR ENV +DGFTLVGL+SSCAHLGALN GV +HR AREKGLV
Sbjct: 199 CYSQKGLHHEALRTYNLMRKENVGLDGFTLVGLLSSCAHLGALNTGVTVHRIAREKGLVG 258
Query: 242 SLYVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQML 301
++YVGNALIDMYAKCG+LD A+ +F+RMQ +D+FTWNSMIVGYGVHGRG E+I F QML
Sbjct: 259 NVYVGNALIDMYAKCGNLDSALSVFERMQNRDVFTWNSMIVGYGVHGRGDESISFFGQML 318
Query: 302 EARMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKL 361
A +QPNSITFLGLLCGCSHQGLV++GV+YF++MSS+F ++P +KHYGCLVDL+GRAG L
Sbjct: 319 MAGVQPNSITFLGLLCGCSHQGLVEKGVEYFNVMSSKFNIKPGIKHYGCLVDLFGRAGML 378
Query: 362 EKALEIVSNS-SQNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIY 421
EKAL+++ S +Q+DPVLWR LLGSCKIHKNV +GEIAM +L +LG++NAGD +LLATIY
Sbjct: 379 EKALQVIKTSRAQDDPVLWRTLLGSCKIHKNVEMGEIAMRNLIQLGSSNAGDYVLLATIY 438
Query: 422 AGKNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVI 481
+ D GVARMRK+IK QG+KTTPGWSWIE+ DQVHKFVVDDKSH + E+Y+KLR V+
Sbjct: 439 FREKDADGVARMRKLIKTQGVKTTPGWSWIEVGDQVHKFVVDDKSHPDANEIYQKLRVVV 498
Query: 482 HQASLFGYVGDESISSLDVLSTTET--LKTSCTYHSEKLAIAFGLARISDGTQIRIVKNL 541
HQA+L GYV + S+ ++ ++T+T L+TS + HSEKLAIAFGLAR +GT +RIVKNL
Sbjct: 499 HQAALHGYVQEGSLITVSEFTSTDTDCLETSSSCHSEKLAIAFGLARTPEGTSLRIVKNL 558
Query: 542 RVCRDCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
RVCRDCHSF K VS AFNREI+VRDRVRFHHF GG CSC DYW
Sbjct: 559 RVCRDCHSFTKFVSPAFNREIVVRDRVRFHHFKGGLCSCKDYW 601
BLAST of ClCG01G004060 vs. NCBI nr
Match:
gi|566208377|ref|XP_002323212.2| (pentatricopeptide repeat-containing family protein [Populus trichocarpa])
HSP 1 Score: 837.0 bits (2161), Expect = 2.0e-239
Identity = 402/579 (69.43%), Postives = 481/579 (83.07%), Query Frame = 1
Query: 2 SKEKAIITLLQGCNNLNKLRKIHAHVIVSGLRDHVAIGNKLLNFCAISVSGSLAYAQLLF 61
SK AI+T+LQGCNNL +L+KI AHVIV+GL++H AI N +LNFCA+S+SGSL YAQ LF
Sbjct: 7 SKANAILTVLQGCNNLTRLKKIQAHVIVNGLQNHPAISNSILNFCAVSISGSLPYAQHLF 66
Query: 62 HQMACPQTEAWNSIIRGFAQSSSPIEAIVFYNRMISASFSSPDTFTFSFVLKACERIKAE 121
+ PQT+AWNSIIRGFAQS SP++AI +YNRM+ S S PDTFTFSF LKACERIKA
Sbjct: 67 RHILNPQTQAWNSIIRGFAQSPSPVQAIFYYNRMLFDSVSGPDTFTFSFTLKACERIKAL 126
Query: 122 RKCKEVHGSVIRCGYDGDVIVCTNLVKCYSVMGSVCSAQQVFDEMPARDLVAWNAMISCF 181
+KC+EVHGS+IR GY+ DV+VCT LV+CY G V A+ VFD MP RDLVAWNAMISC+
Sbjct: 127 KKCEEVHGSIIRTGYERDVVVCTGLVRCYGRNGCVEIARMVFDNMPERDLVAWNAMISCY 186
Query: 182 SQQGLHLESLETYNQMRSENVDVDGFTLVGLISSCAHLGALNIGVQMHRFAREKGLVQSL 241
SQ G H E+L Y+ MR+ENV VDGFTLVGL+SSC+H+GALN+GV++HR A EKGL++++
Sbjct: 187 SQAGYHQEALRVYDYMRNENVGVDGFTLVGLLSSCSHVGALNMGVKLHRIASEKGLLRNV 246
Query: 242 YVGNALIDMYAKCGSLDQAILIFDRMQKKDIFTWNSMIVGYGVHGRGSEAIYCFQQMLEA 301
+VGNALIDMYAKCGSLD A+ +F+ M +D+FTWNSMIVG+GVHG G EAIY F QMLEA
Sbjct: 247 FVGNALIDMYAKCGSLDGALEVFNGM-PRDVFTWNSMIVGFGVHGFGDEAIYFFNQMLEA 306
Query: 302 RMQPNSITFLGLLCGCSHQGLVQEGVKYFHLMSSEFRLRPEVKHYGCLVDLYGRAGKLEK 361
++PNSI FLGLLCGCSHQGLV+EGV++FH MSS+F ++P +KHYGC+VD+YGRAGKLEK
Sbjct: 307 GVRPNSIAFLGLLCGCSHQGLVEEGVEFFHQMSSKFNVKPGIKHYGCMVDMYGRAGKLEK 366
Query: 362 ALEIVSNSS-QNDPVLWRILLGSCKIHKNVTIGEIAMNSLCELGATNAGDCILLATIYAG 421
ALEI+ +S Q+DPVLWRILL S KIHKNV IGEIAM +L +LGA NAGDC+LLATIYAG
Sbjct: 367 ALEIIGDSPWQDDPVLWRILLSSSKIHKNVVIGEIAMRNLSQLGAVNAGDCVLLATIYAG 426
Query: 422 KNDTAGVARMRKMIKRQGIKTTPGWSWIEIEDQVHKFVVDDKSHRYSIEVYEKLREVIHQ 481
ND GVARMRK+IK+QGIKTTPGWSWIE+ DQVH+FVVDDKSH S +Y+KL EV H+
Sbjct: 427 ANDEQGVARMRKLIKKQGIKTTPGWSWIEVSDQVHRFVVDDKSHPDSGMIYQKLEEVTHK 486
Query: 482 ASLFGYVGDESISSLDVLSTTETLKTSCTYHSEKLAIAFGLARISDGTQIRIVKNLRVCR 541
A++ GYV D+S + E L++S TYHSEKLAIAFGLA+ +GT +RIVKNLRVCR
Sbjct: 487 ATMAGYVEDKSQFIFHGSCSEECLESSSTYHSEKLAIAFGLAKTPEGTSLRIVKNLRVCR 546
Query: 542 DCHSFIKAVSAAFNREIIVRDRVRFHHFNGGQCSCNDYW 580
DCH F K VS AFNR+IIVRDR+RFHHF GG CSC DYW
Sbjct: 547 DCHEFTKFVSRAFNRDIIVRDRLRFHHFKGGLCSCRDYW 584
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PP284_ARATH | 2.9e-203 | 59.93 | Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN... | [more] |
PP330_ARATH | 2.1e-124 | 40.93 | Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN... | [more] |
PP145_ARATH | 2.7e-116 | 38.85 | Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop... | [more] |
PP425_ARATH | 6.7e-115 | 36.35 | Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN... | [more] |
PPR71_ARATH | 5.7e-114 | 37.29 | Pentatricopeptide repeat-containing protein At1g34160 OS=Arabidopsis thaliana GN... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LH20_CUCSA | 1.3e-309 | 90.16 | Uncharacterized protein OS=Cucumis sativus GN=Csa_2G074120 PE=4 SV=1 | [more] |
B9IHK4_POPTR | 1.4e-239 | 69.43 | Pentatricopeptide repeat-containing family protein OS=Populus trichocarpa GN=POP... | [more] |
F6I4J1_VITVI | 7.5e-230 | 66.10 | Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0060g00200 PE=4 SV=... | [more] |
M5WNK1_PRUPE | 1.3e-229 | 67.58 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017094mg PE=4 SV=1 | [more] |
W9QXM0_9ROSA | 3.1e-223 | 65.58 | Uncharacterized protein OS=Morus notabilis GN=L484_022672 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G56550.1 | 1.7e-204 | 59.93 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G21065.1 | 1.2e-125 | 40.93 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G02980.1 | 1.5e-117 | 38.85 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G48910.1 | 3.8e-116 | 36.35 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G34160.1 | 3.2e-115 | 37.29 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |