ClCG01G003950 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G003950
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein LENGTH=149
Location	CG_Chr01 : 4316927 .. 4317412 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTCAAGATCACTTCTTTCTCTCATCTTGCTTGCTTCTTCTTTCTCAATCTTCTCTTCTTTACATTTGTGAATTCTACTTGTAAATGCCCTATTCAATCCACCACTTGCTCATGTCCTTCTCAACCAGCTAGTTCAAAGTCAAGTAATTACAATTATGGGAACCCTAAACCTATTCCTCCTCCTCTAACCCCATATCAACCCATCAATAATGATGAAAAATGTCCAAGAGATGCATTAAAGATAGGCATTTGTGCAAAGTTGCTCAATAATGGTTTACTTGAAGCAATTCTTGGGAAACCACCTATAACTGCATGTTGCTCTCTAGTTGAAGGCCTTGCTGATCTTGAAGTTGCTGTTTGCCTTTGTACTGTTCTTAAGGCAACTGTCTTAGGGATTGACCCTCACAATATACCAATTTCACTCAATTTGCTTTCTGGTAATTGTGGTAGAGAAATTCCAATAAGCTTCCAATGTTCTTAG

mRNA sequence

ATGGCTTTCAAGATCACTTCTTTCTCTCATCTTGCTTGCTTCTTCTTTCTCAATCTTCTCTTCTTTACATTTGTGAATTCTACTTGTAAATGCCCTATTCAATCCACCACTTGCTCATGTCCTTCTCAACCAGCTAGTTCAAAGTCAAGTAATTACAATTATGGGAACCCTAAACCTATTCCTCCTCCTCTAACCCCATATCAACCCATCAATAATGATGAAAAATGTCCAAGAGATGCATTAAAGATAGGCATTTGTGCAAAGTTGCTCAATAATGGTTTACTTGAAGCAATTCTTGGGAAACCACCTATAACTGCATGTTGCTCTCTAGTTGAAGGCCTTGCTGATCTTGAAGTTGCTGTTTGCCTTTGTACTGTTCTTAAGGCAACTGTCTTAGGGATTGACCCTCACAATATACCAATTTCACTCAATTTGCTTTCTGGTAATTGTGGTAGAGAAATTCCAATAAGCTTCCAATGTTCTTAG

Coding sequence (CDS)

ATGGCTTTCAAGATCACTTCTTTCTCTCATCTTGCTTGCTTCTTCTTTCTCAATCTTCTCTTCTTTACATTTGTGAATTCTACTTGTAAATGCCCTATTCAATCCACCACTTGCTCATGTCCTTCTCAACCAGCTAGTTCAAAGTCAAGTAATTACAATTATGGGAACCCTAAACCTATTCCTCCTCCTCTAACCCCATATCAACCCATCAATAATGATGAAAAATGTCCAAGAGATGCATTAAAGATAGGCATTTGTGCAAAGTTGCTCAATAATGGTTTACTTGAAGCAATTCTTGGGAAACCACCTATAACTGCATGTTGCTCTCTAGTTGAAGGCCTTGCTGATCTTGAAGTTGCTGTTTGCCTTTGTACTGTTCTTAAGGCAACTGTCTTAGGGATTGACCCTCACAATATACCAATTTCACTCAATTTGCTTTCTGGTAATTGTGGTAGAGAAATTCCAATAAGCTTCCAATGTTCTTAG

Protein sequence

MAFKITSFSHLACFFFLNLLFFTFVNSTCKCPIQSTTCSCPSQPASSKSSNYNYGNPKPIPPPLTPYQPINNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLVEGLADLEVAVCLCTVLKATVLGIDPHNIPISLNLLSGNCGREIPISFQCS

Homology

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BLAST of ClCG01G003950 vs. Swiss-Prot
Match: 14KD_DAUCA (14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-28
Identity = 70/152 (46.05%), Postives = 92/152 (60.53%), Query Frame = 1


Query: 11  LACFFFLNLLFFTFVNSTCKCPIQSTTCSCPSQPASSKSSNYNYGNPKPIPPPL-TPYQP 70
           +A FF LN+LFF  V+ST KCP        P +P            PKP P P  TPY  
Sbjct: 9   VALFFTLNILFFALVSSTEKCPD-------PYKP-----------KPKPTPKPTPTPYPS 68

Query: 71  INNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLVEGLADLEVAVCLCTVLKA 130
                KCPRDALK+G+CA +LN  +   ++G PP   CCSL+EGL +LE AVCLCT +KA
Sbjct: 69  AG---KCPRDALKLGVCADVLNL-VHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKA 128

Query: 131 TVLGIDPHNIPISLNLLSGNCGREIPISFQCS 162
            +LG +  N+PI+L+L+  NCG+++P  F+C+
Sbjct: 129 NILGKN-LNLPIALSLVLNNCGKQVPNGFECT 137

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BLAST of ClCG01G003950 vs. Swiss-Prot
Match: ERLL1_ARATH (pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.9e-28
Identity = 73/162 (45.06%), Postives = 96/162 (59.26%), Query Frame = 1


Query: 11  LACFFFLNLLFFTFVNST-CKC-------PIQSTT---CSCPSQPASSKSSNYNYGNPKP 70
           LA FF LN+LFFT   +T C C       P+ S       CP  P  S  S     NP+P
Sbjct: 9   LALFFALNILFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVPSP----NPRP 68

Query: 71  IPPPLTPYQPINNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLVEGLADLEV 130
           + PP TP    N+   CP DALK+G+CA +L++ LL   LG+P    CCSL++GL D++ 
Sbjct: 69  VTPPRTPGSSGNS---CPIDALKLGVCANVLSS-LLNIQLGQPSSQQCCSLIQGLVDVDA 128

Query: 131 AVCLCTVLKATVLGIDPHNIPISLNLLSGNCGREIPISFQCS 162
           A+CLCT L+A VLGI+  N+PISL++L   C R++P  FQC+
Sbjct: 129 AICLCTALRANVLGIN-LNVPISLSVLLNVCNRKLPSGFQCA 161

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BLAST of ClCG01G003950 vs. Swiss-Prot
Match: ERLL3_ARATH (pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana GN=At4g12500 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 3.3e-27
Identity = 69/171 (40.35%), Postives = 93/171 (54.39%), Query Frame = 1


Query: 11  LACFFFLNLLFFTFVNST-CKCPIQSTTCSCPSQ-------------------PASSKSS 70
           LA FF LN+LFFT   +T C+C +     + PS                    P+    S
Sbjct: 9   LALFFALNILFFTLTTATDCRCNLSPKPRTVPSPKVPSPKYPSPSIPSPSVPTPSVPTPS 68

Query: 71  NYNYGNPKPIPPPLTPYQPINNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSL 130
                 P P P P+TP +   +   CP DAL++G+CA +L+ GLL   LG+P    CCSL
Sbjct: 69  VPTPSVPSPNPTPVTPPRTPGSSGNCPIDALRLGVCANVLS-GLLNVQLGQPSAQPCCSL 128

Query: 131 VEGLADLEVAVCLCTVLKATVLGIDPHNIPISLNLLSGNCGREIPISFQCS 162
           ++GL DL+ A+CLCT L+A VLGI+  N+PISL++L   C R +P  FQC+
Sbjct: 129 IQGLVDLDAAICLCTALRANVLGIN-LNVPISLSVLLNVCNRRLPSDFQCA 177

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BLAST of ClCG01G003950 vs. Swiss-Prot
Match: ERLL2_ARATH (pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana GN=At4g12490 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 9.5e-27
Identity = 71/176 (40.34%), Postives = 94/176 (53.41%), Query Frame = 1


Query: 11  LACFFFLNLLFFTFVNST-CKC-------PIQSTTCSCPSQPASSKSSNY---------- 70
           LA FF LN+LFFT    T C+C       P+ +     P  P  S  S Y          
Sbjct: 9   LALFFALNILFFTLTAGTNCRCNPSPKPRPLPNPKVPSPKVPTPSVPSPYVPTPSVPSPS 68

Query: 71  -------NYGNPKPIPPPLTPYQPINNDEKCPRDALKIGICAKLLNNGLLEAILGKPPIT 130
                  +   P P P P+ P +   +   CP DAL++G+CA +L+ GLL   LG+P   
Sbjct: 69  VPTPSVPSPSVPSPNPTPVIPPRTPGSSGNCPIDALRLGVCANVLS-GLLNVQLGQPSPQ 128

Query: 131 ACCSLVEGLADLEVAVCLCTVLKATVLGIDPHNIPISLNLLSGNCGREIPISFQCS 162
            CCSL++GL DL+ AVCLCT L+A VLGI+  N+PISL++L   C R +P +FQC+
Sbjct: 129 PCCSLIQGLVDLDAAVCLCTALRANVLGIN-LNVPISLSVLLNVCNRRLPSNFQCA 182

[Close]

BLAST of ClCG01G003950 vs. Swiss-Prot
Match: ERLI1_ARATH (Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.6e-26
Identity = 70/170 (41.18%), Postives = 96/170 (56.47%), Query Frame = 1


Query: 11  LACFFFLNLLFFTFVNST-CKC-------PIQSTT-----------CSCPSQPASSKSSN 70
           +A FF LN++FFT   +T C C       P+ S                PS P+ S  S 
Sbjct: 9   IALFFALNIIFFTLTAATDCGCNPSPKHKPVPSPKPKPVPSPKPKPVPSPSVPSPSVPSP 68

Query: 71  YNYGNPKPIPPPLTPYQPINNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLV 130
               NP+P+ PP TP     +   CP DAL++G+CA +L++ LL   LG+P    CCSL+
Sbjct: 69  ----NPRPVTPPRTP----GSSGNCPIDALRLGVCANVLSS-LLNIQLGQPSAQPCCSLI 128

Query: 131 EGLADLEVAVCLCTVLKATVLGIDPHNIPISLNLLSGNCGREIPISFQCS 162
           +GL DL+ A+CLCT L+A VLGI+  N+PISL++L   C R++P  FQC+
Sbjct: 129 QGLVDLDAAICLCTALRANVLGIN-LNVPISLSVLLNVCNRKVPSGFQCA 168

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BLAST of ClCG01G003950 vs. TrEMBL
Match: V4KH25_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10023747mg PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 2.0e-31
Identity = 77/150 (51.33%), Postives = 94/150 (62.67%), Query Frame = 1


Query: 11  LACFFFLNLLFFTFVNSTCKCPIQSTTCSCPSQPASSKSSNYNYGNPKPIPPPLTPYQPI 70
           LA F  LN+LFFT + S C        C CPS     K S+    NPKP P P     P 
Sbjct: 9   LALFLILNILFFTTI-SACG------NCGCPSPKPKHKPSHKPKPNPKPKPTPSP--SPT 68

Query: 71  NNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLVEGLADLEVAVCLCTVLKAT 130
              EKCPRDALK+G+CA +LN GLL   LGKPP+  CC+L++GLADLE A CLCT LK  
Sbjct: 69  PTTEKCPRDALKLGVCANVLN-GLLNITLGKPPVEPCCNLIKGLADLEAAACLCTALKGN 128

Query: 131 VLGIDPHNIPISLNLLSGNCGREIPISFQC 161
           +LGI+  NIP+SL+LL   C +++P  FQC
Sbjct: 129 ILGIN-LNIPLSLSLLLNVCSKKVPPGFQC 147

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BLAST of ClCG01G003950 vs. TrEMBL
Match: A0A087G7Q7_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G178400 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.3e-30
Identity = 78/155 (50.32%), Postives = 95/155 (61.29%), Query Frame = 1


Query: 9   SHLACFFFLNLLFFTFVNSTCKC---PIQSTTCSCPSQPASSKSSNYNYGNPKPIPPPLT 68
           S LA F  LNLLFFT +++  KC   P +      P    S   S     NPKP P P  
Sbjct: 7   SSLALFLILNLLFFTTISAGSKCGCPPSKPKPNPSPKPKPSPSHSPTPKPNPKPKPSPSP 66

Query: 69  PYQPINNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLVEGLADLEVAVCLCT 128
              P     KCPRDALK+G+CA +LN GLL   LGKPP+  CC+L++GLADLE A CLCT
Sbjct: 67  SPTPAT--AKCPRDALKLGVCANVLN-GLLNITLGKPPVEPCCTLIQGLADLEAAACLCT 126

Query: 129 VLKATVLGIDPHNIPISLNLLSGNCGREIPISFQC 161
            LKA +LGI+  NIPISL+LL   C +++P  FQC
Sbjct: 127 ALKANILGIN-LNIPISLSLLLNVCSKKVPPGFQC 157

[Close]

BLAST of ClCG01G003950 vs. TrEMBL
Match: Q9SXE6_ARATH (At1g62510 OS=Arabidopsis thaliana GN=At1g62510 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 4.9e-30
Identity = 75/150 (50.00%), Postives = 90/150 (60.00%), Query Frame = 1


Query: 11  LACFFFLNLLFFTFVNSTCKCPIQSTTCSCPSQPASSKSSNYNYGNPKPIPPPLTPYQPI 70
           LA F  LN LFFT + S C        C CPS     K S      P P P P     P 
Sbjct: 9   LALFLILNFLFFTTI-SACG------NCGCPSPKPKHKPSPSPKPKPNPKPKPTPHPSPS 68

Query: 71  NNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLVEGLADLEVAVCLCTVLKAT 130
               KCPRDALK+G+CA +LN GLL   LGKPP+  CC+L++GLADLE A CLCT LKA 
Sbjct: 69  PAIAKCPRDALKLGVCANVLN-GLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKAN 128

Query: 131 VLGIDPHNIPISLNLLSGNCGREIPISFQC 161
           +LGI+  NIP+SL+LL   C +++P  FQC
Sbjct: 129 ILGIN-LNIPLSLSLLLNVCSKKVPRGFQC 149

[Close]

BLAST of ClCG01G003950 vs. TrEMBL
Match: A0A0K9Q5V3_ZOSMR (14 kDa proline-rich protein DC2.15 OS=Zostera marina GN=ZOSMA_109G00450 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.4e-30
Identity = 73/152 (48.03%), Postives = 93/152 (61.18%), Query Frame = 1


Query: 9   SHLACFFFLNLLFFTFVNSTCKCPIQSTTCSCPSQPASSKSSNYNYGNPKPIPPPLTPYQ 68
           S +A F  LNLLF + V S   CP        P  P   ++       PK  PPP T   
Sbjct: 5   SRVALFLALNLLFLSLVTSCSYCPK-------PKPPPKKRT-------PKACPPPYTYTP 64

Query: 69  PINNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLVEGLADLEVAVCLCTVLK 128
           P     KCP DALK+G+CA +LN GL+  ++G PP T CC+L++GLADLE AVCLCT +K
Sbjct: 65  PTGTGGKCPIDALKLGVCANILN-GLINVVIGTPPKTPCCNLIDGLADLEAAVCLCTAIK 124

Query: 129 ATVLGIDPHNIPISLNLLSGNCGREIPISFQC 161
           A VLGI+  N+P+SL+LL   CG++IP  FQC
Sbjct: 125 ANVLGIN-LNLPVSLSLLVNYCGKKIPSGFQC 140

[Close]

BLAST of ClCG01G003950 vs. TrEMBL
Match: P93512_BRANA (Proline-rich SAC51 protein OS=Brassica napus GN=proline-rich SAC51 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.4e-30
Identity = 77/160 (48.12%), Postives = 98/160 (61.25%), Query Frame = 1


Query: 1   MAFKITSFSHLACFFFLNLLFFTFVNSTCKCPIQSTTCSCPSQPASSKSSNYNYGNPKPI 60
           MA +  SF  LA F  LN+LF T +++          C CPS       S+    NPKP 
Sbjct: 1   MASRTKSF--LAIFLILNILFCTTISAY-------GNCGCPSPKPKPDPSHKPKPNPKPK 60

Query: 61  PPPLTPYQPINNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLVEGLADLEVA 120
           P P     P+    KCPRDALK+G+CA +L+ GLL   LGKPP+  CC+L++GLADLE A
Sbjct: 61  PTPTPTPSPVT--AKCPRDALKLGVCANVLS-GLLNITLGKPPVKPCCTLIKGLADLEAA 120

Query: 121 VCLCTVLKATVLGIDPHNIPISLNLLSGNCGREIPISFQC 161
            CLCT LKA +LGI+  NIPISL+LL   C +++P  FQC
Sbjct: 121 ACLCTALKANILGIN-LNIPISLSLLLNVCSKKVPPGFQC 147

[Close]

BLAST of ClCG01G003950 vs. TAIR10
Match: AT1G62510.1 (AT1G62510.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 139.0 bits (349), Expect = 2.5e-33
Identity = 75/150 (50.00%), Postives = 88/150 (58.67%), Query Frame = 1


Query: 11  LACFFFLNLLFFTFVNSTCKCPIQSTTCSCPSQPASSKSSNYNYGNPKPIPPPLTPYQPI 70
           LA F  LN LFFT + S C        C CPS     K S      P P P P     P 
Sbjct: 9   LALFLILNFLFFTTI-SACG------NCGCPSPKPKHKPSPSPKPKPNPKPKPTPHPSPS 68

Query: 71  NNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLVEGLADLEVAVCLCTVLKAT 130
               KCPRDALK+G+CA +LN GLL   LGKPP+  CC+L++GLADLE A CLCT LKA 
Sbjct: 69  PAIAKCPRDALKLGVCANVLN-GLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKAN 128

Query: 131 VLGIDPHNIPISLNLLSGNCGREIPISFQC 161
           +LGI+  NIP+SL+LL   C +++P  FQC
Sbjct: 129 ILGIN-LNIPLSLSLLLNVCSKKVPRGFQC 149

[Close]

BLAST of ClCG01G003950 vs. TAIR10
Match: AT1G12090.1 (AT1G12090.1 extensin-like protein)

HSP 1 Score: 137.9 bits (346), Expect = 5.5e-33
Identity = 74/154 (48.05%), Postives = 93/154 (60.39%), Query Frame = 1


Query: 9   SHLACFFFLNLLFFTFVNSTCKCPIQSTTCS--CPSQPASSKSSNYNYGNPKPIPPPLTP 68
           S +A F  LNLLFFT +++   C    T C   CPS              PKP P P   
Sbjct: 4   SSIALFLALNLLFFTTISACGSC----TPCGGGCPS--------------PKPKPTPKPT 63

Query: 69  YQPINNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLVEGLADLEVAVCLCTV 128
             P +   KCP+D LK+G+CA +LN GLL+  LGKPP+  CCSL++GLAD+E AVCLCT 
Sbjct: 64  PSPSSGSSKCPKDTLKLGVCANVLN-GLLDLTLGKPPVEPCCSLIQGLADVEAAVCLCTA 123

Query: 129 LKATVLGIDPHNIPISLNLLSGNCGREIPISFQC 161
           LKA +LGI+  N+PISL+LL   C +++P  FQC
Sbjct: 124 LKANILGIN-LNLPISLSLLLNVCSKQLPPGFQC 137

[Close]

BLAST of ClCG01G003950 vs. TAIR10
Match: AT4G12470.1 (AT4G12470.1 azelaic acid induced 1)

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-29
Identity = 73/162 (45.06%), Postives = 96/162 (59.26%), Query Frame = 1


Query: 11  LACFFFLNLLFFTFVNST-CKC-------PIQSTT---CSCPSQPASSKSSNYNYGNPKP 70
           LA FF LN+LFFT   +T C C       P+ S       CP  P  S  S     NP+P
Sbjct: 9   LALFFALNILFFTLTVATNCNCKPSPKPKPVPSPKPKPVQCPPPPRPSVPSP----NPRP 68

Query: 71  IPPPLTPYQPINNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLVEGLADLEV 130
           + PP TP    N+   CP DALK+G+CA +L++ LL   LG+P    CCSL++GL D++ 
Sbjct: 69  VTPPRTPGSSGNS---CPIDALKLGVCANVLSS-LLNIQLGQPSSQQCCSLIQGLVDVDA 128

Query: 131 AVCLCTVLKATVLGIDPHNIPISLNLLSGNCGREIPISFQCS 162
           A+CLCT L+A VLGI+  N+PISL++L   C R++P  FQC+
Sbjct: 129 AICLCTALRANVLGIN-LNVPISLSVLLNVCNRKLPSGFQCA 161

[Close]

BLAST of ClCG01G003950 vs. TAIR10
Match: AT2G45180.1 (AT2G45180.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-28
Identity = 73/150 (48.67%), Postives = 87/150 (58.00%), Query Frame = 1


Query: 12  ACFFFLNLLFFTFVNSTCKCPIQSTTCSCPSQPASSKSSNYNYGNPKPIPPPLTPYQPIN 71
           A    LNLLFFTFV ST KCP   TT   P  P S K +           P + P     
Sbjct: 10  ALLITLNLLFFTFVTST-KCP--PTTPKPPKTPKSPKKA-----------PAVKP----- 69

Query: 72  NDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLVEGLADLEVAVCLCTVLKATV 131
               CP D LK+G+CA LL  GL+  ++G PP T CC+L++GLA+LE AVCLCT LKA V
Sbjct: 70  ---TCPTDTLKLGVCADLL--GLVNVVVGSPPKTPCCTLLQGLANLEAAVCLCTALKANV 129

Query: 132 LGIDPHNIPISLNLLSGNCGREIPISFQCS 162
           LGI+  N+PI L LL   CG+++P  FQCS
Sbjct: 130 LGIN-LNVPIDLTLLLNYCGKKVPHGFQCS 134

[Close]

BLAST of ClCG01G003950 vs. TAIR10
Match: AT4G12500.1 (AT4G12500.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein)

HSP 1 Score: 122.9 bits (307), Expect = 1.8e-28
Identity = 69/171 (40.35%), Postives = 93/171 (54.39%), Query Frame = 1


Query: 11  LACFFFLNLLFFTFVNST-CKCPIQSTTCSCPSQ-------------------PASSKSS 70
           LA FF LN+LFFT   +T C+C +     + PS                    P+    S
Sbjct: 9   LALFFALNILFFTLTTATDCRCNLSPKPRTVPSPKVPSPKYPSPSIPSPSVPTPSVPTPS 68

Query: 71  NYNYGNPKPIPPPLTPYQPINNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSL 130
                 P P P P+TP +   +   CP DAL++G+CA +L+ GLL   LG+P    CCSL
Sbjct: 69  VPTPSVPSPNPTPVTPPRTPGSSGNCPIDALRLGVCANVLS-GLLNVQLGQPSAQPCCSL 128

Query: 131 VEGLADLEVAVCLCTVLKATVLGIDPHNIPISLNLLSGNCGREIPISFQCS 162
           ++GL DL+ A+CLCT L+A VLGI+  N+PISL++L   C R +P  FQC+
Sbjct: 129 IQGLVDLDAAICLCTALRANVLGIN-LNVPISLSVLLNVCNRRLPSDFQCA 177

[Close]

BLAST of ClCG01G003950 vs. NCBI nr
Match: gi|567127722|ref|XP_006391856.1| (hypothetical protein EUTSA_v10023747mg [Eutrema salsugineum])

HSP 1 Score: 143.7 bits (361), Expect = 2.9e-31
Identity = 77/150 (51.33%), Postives = 94/150 (62.67%), Query Frame = 1


Query: 11  LACFFFLNLLFFTFVNSTCKCPIQSTTCSCPSQPASSKSSNYNYGNPKPIPPPLTPYQPI 70
           LA F  LN+LFFT + S C        C CPS     K S+    NPKP P P     P 
Sbjct: 9   LALFLILNILFFTTI-SACG------NCGCPSPKPKHKPSHKPKPNPKPKPTPSP--SPT 68

Query: 71  NNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLVEGLADLEVAVCLCTVLKAT 130
              EKCPRDALK+G+CA +LN GLL   LGKPP+  CC+L++GLADLE A CLCT LK  
Sbjct: 69  PTTEKCPRDALKLGVCANVLN-GLLNITLGKPPVEPCCNLIKGLADLEAAACLCTALKGN 128

Query: 131 VLGIDPHNIPISLNLLSGNCGREIPISFQC 161
           +LGI+  NIP+SL+LL   C +++P  FQC
Sbjct: 129 ILGIN-LNIPLSLSLLLNVCSKKVPPGFQC 147

[Close]

BLAST of ClCG01G003950 vs. NCBI nr
Match: gi|1021470327|ref|XP_016188706.1| (PREDICTED: lipid transfer protein EARLI 1-like [Arachis ipaensis])

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-30
Identity = 81/178 (45.51%), Postives = 105/178 (58.99%), Query Frame = 1


Query: 1   MAFKITSFSHLACFFFLNLLFFTFVNST-CKCPIQS----------------TTCSCPSQ 60
           MAFK  S +++A FF LNLLFF  V+    KCP                      + P+ 
Sbjct: 1   MAFKPCSSNNIALFFTLNLLFFALVSGCGYKCPNPKPKPNPNPNPNNPNPNPNNPNNPNP 60

Query: 61  PASSKSSNYNYGNPKPIPPPLTPYQPINNDEKCPRDALKIGICAKLLNNGLLEAILGKPP 120
             ++ + N N  NP P P P  P    NN+  CPRDALK+GICA +L+ GLL   LG+PP
Sbjct: 61  NPNNPNPNPNPNNPNPNPNPNNP----NNNMTCPRDALKLGICANVLS-GLLNITLGQPP 120

Query: 121 ITACCSLVEGLADLEVAVCLCTVLKATVLGIDPHNIPISLNLLSGNCGREIPISFQCS 162
           +T CCSL+ GL DLE A+CLCT L+  +LGI+  N+PISL+LL   C R++P  FQCS
Sbjct: 121 VTPCCSLLSGLVDLEAAICLCTALRGNILGIN-INLPISLSLLLNVCSRQVPRGFQCS 172

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BLAST of ClCG01G003950 vs. NCBI nr
Match: gi|674233144|gb|KFK25909.1| (hypothetical protein AALP_AA8G178400 [Arabis alpina])

HSP 1 Score: 141.0 bits (354), Expect = 1.9e-30
Identity = 78/155 (50.32%), Postives = 95/155 (61.29%), Query Frame = 1


Query: 9   SHLACFFFLNLLFFTFVNSTCKC---PIQSTTCSCPSQPASSKSSNYNYGNPKPIPPPLT 68
           S LA F  LNLLFFT +++  KC   P +      P    S   S     NPKP P P  
Sbjct: 7   SSLALFLILNLLFFTTISAGSKCGCPPSKPKPNPSPKPKPSPSHSPTPKPNPKPKPSPSP 66

Query: 69  PYQPINNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLVEGLADLEVAVCLCT 128
              P     KCPRDALK+G+CA +LN GLL   LGKPP+  CC+L++GLADLE A CLCT
Sbjct: 67  SPTPAT--AKCPRDALKLGVCANVLN-GLLNITLGKPPVEPCCTLIQGLADLEAAACLCT 126

Query: 129 VLKATVLGIDPHNIPISLNLLSGNCGREIPISFQC 161
            LKA +LGI+  NIPISL+LL   C +++P  FQC
Sbjct: 127 ALKANILGIN-LNIPISLSLLLNVCSKKVPPGFQC 157

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BLAST of ClCG01G003950 vs. NCBI nr
Match: gi|15221484|ref|NP_176440.1| (bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein [Arabidopsis thaliana])

HSP 1 Score: 139.0 bits (349), Expect = 7.1e-30
Identity = 75/150 (50.00%), Postives = 90/150 (60.00%), Query Frame = 1


Query: 11  LACFFFLNLLFFTFVNSTCKCPIQSTTCSCPSQPASSKSSNYNYGNPKPIPPPLTPYQPI 70
           LA F  LN LFFT + S C        C CPS     K S      P P P P     P 
Sbjct: 9   LALFLILNFLFFTTI-SACG------NCGCPSPKPKHKPSPSPKPKPNPKPKPTPHPSPS 68

Query: 71  NNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLVEGLADLEVAVCLCTVLKAT 130
               KCPRDALK+G+CA +LN GLL   LGKPP+  CC+L++GLADLE A CLCT LKA 
Sbjct: 69  PAIAKCPRDALKLGVCANVLN-GLLNVTLGKPPVEPCCTLIQGLADLEAAACLCTALKAN 128

Query: 131 VLGIDPHNIPISLNLLSGNCGREIPISFQC 161
           +LGI+  NIP+SL+LL   C +++P  FQC
Sbjct: 129 ILGIN-LNIPLSLSLLLNVCSKKVPRGFQC 149

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BLAST of ClCG01G003950 vs. NCBI nr
Match: gi|727508356|ref|XP_010430305.1| (PREDICTED: lipid transfer protein EARLI 1 [Camelina sativa])

HSP 1 Score: 139.0 bits (349), Expect = 7.1e-30
Identity = 73/150 (48.67%), Postives = 90/150 (60.00%), Query Frame = 1


Query: 11  LACFFFLNLLFFTFVNSTCKCPIQSTTCSCPSQPASSKSSNYNYGNPKPIPPPLTPYQPI 70
           LA F  LN LFFT +++       S  C CPS       S      P P P P     P 
Sbjct: 9   LALFLILNFLFFTTISA-------SGNCGCPSPKPKPNPSPSPKPKPNPKPNPTPNPSPS 68

Query: 71  NNDEKCPRDALKIGICAKLLNNGLLEAILGKPPITACCSLVEGLADLEVAVCLCTVLKAT 130
               KCP+DALK+G+CA +LN GLL   LGKPP+  CC+L++GLADLE A CLCT LKA 
Sbjct: 69  PTTAKCPKDALKLGVCANVLN-GLLNITLGKPPVEPCCTLIQGLADLEAAACLCTALKAN 128

Query: 131 VLGIDPHNIPISLNLLSGNCGREIPISFQC 161
           +LGI+  NIPISL+LL   C +++P  FQC
Sbjct: 129 ILGIN-LNIPISLSLLLNVCSKKVPPGFQC 149

The following BLAST results are available for this feature:

BLAST of ClCG01G003950 vs. Swiss-Prot


Match Name	E-value	Identity	Description
14KD_DAUCA	1.3e-28	46.05	14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1	[more]
ERLL1_ARATH	3.9e-28	45.06	pEARLI1-like lipid transfer protein 1 OS=Arabidopsis thaliana GN=AZI1 PE=1 SV=1	[more]
ERLL3_ARATH	3.3e-27	40.35	pEARLI1-like lipid transfer protein 3 OS=Arabidopsis thaliana GN=At4g12500 PE=2 ...	[more]
ERLL2_ARATH	9.5e-27	40.34	pEARLI1-like lipid transfer protein 2 OS=Arabidopsis thaliana GN=At4g12490 PE=2 ...	[more]
ERLI1_ARATH	3.6e-26	41.18	Lipid transfer protein EARLI 1 OS=Arabidopsis thaliana GN=EARLI1 PE=1 SV=1	[more]

BLAST of ClCG01G003950 vs. TrEMBL


Match Name	E-value	Identity	Description
V4KH25_EUTSA	2.0e-31	51.33	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10023747mg PE=4 SV=1	[more]
A0A087G7Q7_ARAAL	1.3e-30	50.32	Uncharacterized protein OS=Arabis alpina GN=AALP_AA8G178400 PE=4 SV=1	[more]
Q9SXE6_ARATH	4.9e-30	50.00	At1g62510 OS=Arabidopsis thaliana GN=At1g62510 PE=2 SV=1	[more]
A0A0K9Q5V3_ZOSMR	6.4e-30	48.03	14 kDa proline-rich protein DC2.15 OS=Zostera marina GN=ZOSMA_109G00450 PE=4 SV=...	[more]
P93512_BRANA	6.4e-30	48.13	Proline-rich SAC51 protein OS=Brassica napus GN=proline-rich SAC51 PE=2 SV=1	[more]

BLAST of ClCG01G003950 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G62510.1	2.5e-33	50.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT1G12090.1	5.5e-33	48.05	extensin-like protein	[more]
AT4G12470.1	2.2e-29	45.06	azelaic acid induced 1	[more]
AT2G45180.1	1.1e-28	48.67	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]
AT4G12500.1	1.8e-28	40.35	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumi...	[more]

BLAST of ClCG01G003950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|567127722\|ref\|XP_006391856.1\|	2.9e-31	51.33	hypothetical protein EUTSA_v10023747mg [Eutrema salsugineum]	[more]
gi\|1021470327\|ref\|XP_016188706.1\|	1.4e-30	45.51	PREDICTED: lipid transfer protein EARLI 1-like [Arachis ipaensis]	[more]
gi\|674233144\|gb\|KFK25909.1\|	1.9e-30	50.32	hypothetical protein AALP_AA8G178400 [Arabis alpina]	[more]
gi\|15221484\|ref\|NP_176440.1\|	7.1e-30	50.00	bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like prote...	[more]
gi\|727508356\|ref\|XP_010430305.1\|	7.1e-30	48.67	PREDICTED: lipid transfer protein EARLI 1 [Camelina sativa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016140	Bifunc_inhib/LTP/seed_store
IPR027923	Hydrophob_seed

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G003950.1	ClCG01G003950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 76..160 score: 1.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 78..160 score: 9.96
IPR027923	Hydrophobic seed protein	PFAM	PF14547	Hydrophob_seed	coord: 75..161 score: 2.3
None	No IPR available	GENE3D	G3DSA:1.10.110.10		coord: 74..160 score: 1.4
None	No IPR available	PANTHER	PTHR31731	FAMILY NOT NAMED	coord: 51..161 score: 6.0E-42coord: 1..33 score: 6.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G003950	Csa3G021150	Cucumber (Chinese Long) v2	cuwcgB207
ClCG01G003950	Csa5G161300	Cucumber (Chinese Long) v2	cuwcgB364
ClCG01G003950	MELO3C013958	Melon (DHL92) v3.5.1	mewcgB418
ClCG01G003950	MELO3C005540	Melon (DHL92) v3.5.1	mewcgB018
ClCG01G003950	Cla011569	Watermelon (97103) v1	wcgwmB142
ClCG01G003950	Cla005657	Watermelon (97103) v1	wcgwmB119
ClCG01G003950	Cla97C01G004080	Watermelon (97103) v2	wcgwmbB089
ClCG01G003950	Cla97C10G187370	Watermelon (97103) v2	wcgwmbB094
ClCG01G003950	Bhi12G000405	Wax gourd	wcgwgoB193
ClCG01G003950	CSPI05G06670	Wild cucumber (PI 183967)	cpiwcgB379
ClCG01G003950	CSPI03G02910	Wild cucumber (PI 183967)	cpiwcgB211
ClCG01G003950	Cucsa.301920	Cucumber (Gy14) v1	cgywcgB520
ClCG01G003950	Cucsa.320710	Cucumber (Gy14) v1	cgywcgB557
ClCG01G003950	CmaCh15G011360	Cucurbita maxima (Rimu)	cmawcgB259
ClCG01G003950	CmaCh02G015460	Cucurbita maxima (Rimu)	cmawcgB524
ClCG01G003950	CmoCh15G011880	Cucurbita moschata (Rifu)	cmowcgB247
ClCG01G003950	CmoCh02G015880	Cucurbita moschata (Rifu)	cmowcgB522
ClCG01G003950	Lsi09G004120	Bottle gourd (USVL1VR-Ls)	lsiwcgB008
ClCG01G003950	Lsi07G013170	Bottle gourd (USVL1VR-Ls)	lsiwcgB394
ClCG01G003950	CsGy3G002830	Cucumber (Gy14) v2	cgybwcgB192
ClCG01G003950	CsGy5G004030	Cucumber (Gy14) v2	cgybwcgB332
ClCG01G003950	MELO3C005540.2	Melon (DHL92) v3.6.1	medwcgB016
ClCG01G003950	CsaV3_5G004100	Cucumber (Chinese Long) v3	cucwcgB385
ClCG01G003950	CsaV3_3G002880	Cucumber (Chinese Long) v3	cucwcgB211

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
ClCG01G003950	ClCG10G002840	Watermelon (Charleston Gray)	wcgwcgB041

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G003950	Cucurbita maxima (Rimu)	cmawcgB518
ClCG01G003950	Cucurbita maxima (Rimu)	cmawcgB733
ClCG01G003950	Cucurbita moschata (Rifu)	cmowcgB516
ClCG01G003950	Cucurbita moschata (Rifu)	cmowcgB737
ClCG01G003950	Cucurbita pepo (Zucchini)	cpewcgB165
ClCG01G003950	Cucurbita pepo (Zucchini)	cpewcgB637
ClCG01G003950	Cucurbita pepo (Zucchini)	cpewcgB780
ClCG01G003950	Silver-seed gourd	carwcgB0897
ClCG01G003950	Silver-seed gourd	carwcgB0899