ClCG01G003570 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G003570
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	ATP-dependent Clp protease proteolytic subunit
Location	CG_Chr01 : 3744446 .. 3747698 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAGAATCGGACCCGAAACGGGTGTAGCTCTTTCGCATTGGGTGTTCTGTAATCGACTGGGAATGGCACTCTCTTCTACTCCCTGTCTTCAACCCCAAATTAAAGTTTCTCAGCCTCCTCTCAGGTTCTCCCTCTCTCTCTTTCGATTATTAGTTAAAATTTACGCTATTCGCGTCGCTTACCTGATTTCGTTTCGATTTTCTGAATTTTGCAAGCTTTACGACCAAGGTTTACTCGGGACTGAAGCCTCAATCTGCTAGTGAGCTTGGATTCCCGTCCTTCTCATGATGTCACTCATCTGTTTCACTGTTCGTTATTTACCTATCGCTTCTGTTTGTTTTTCAAATTTTAAGGTCCATTCGGAGGAGCAAAACCTAATCTTACTGCTGAATTCTATGGAAAAGTTCATAAAAGTTTACAAGCCAGGTAATTGTAGCTCTTGCTAAGCCCGTATCCTATTTTCCATTTATTTTCTGTGTTGGAATTTGGAAGCATATCCTTTAAAAGTAAACATCCTATTAAATTCTCGTGATATTAATCAATTGGAATTCTTGGACTTTCATGACATTCTATGCTTCTCAATGATGTAGGAGCGGAAGTATACCCTTGTAGTTAACTTATTTTTAAGTCCTGGTTCTTGCCAAAATGTATTGTTTGCTGCTAAAATTGCTTCCTTCATTACTCAATGTACGGAGTAACAGTCGGGAGAGATTGACTTGAAATCCCTTCTTATACCGTAGTGTGCAGAAACTATTATTGATGTTACGCCTGTTCTACTGAATATGGGAATTGCTCTACTTCTCTTGGCCCTTTTGAATATCTTTTATTTTCCTTCAGTTACTGAATTTGAGTGCTTGGAGAGCCGTGGATGTGTACTCAAATTTATGAGAACATGGTCACTAGCATTTTTTTAATTTTCAAAAACTTGTTTTTTAGTGAAATTTCAAAAAGAGTATCAAGTTTTTGAAACACTACATTTTTTTAATTTCCAAAAACTTGTTTTTGTTTTTGGAATTTGATTACTAATTCAAATGTTGCTTTGAAAAATGTGAAAACCGTACTAAAGAAATAGTGAGTAGACCTGCATAAATTTCAATAACAAAAAATGAAAAGGTATCAAACGGTCCCTGTTATTTCCTGTATTTTCCATTCAAACCTTGGTGTATAAAGGTGATTTCAATTCACTTATTGGTGCTTGCTGTGTCAATAACATCTGTAAGGACAACAAAGCTGAAGAGAAATGAAAAGAGAAGGCGTTCAGTTGCATCCTACCCTAAGTGCATTTGTCTGGCAGTTAATGTATTTCTTCTAATTCATTGCTTTACATGCAGGACACATAACAAAAAGGCTGCTCGTGCACAATTTCAGATGATGCCTATAGGGACACCAAAGGTGCCTTACAGAACTCCTGGCGAGGGAACTTGGCAATGGGTTGATTTGTGGAATGCCCTGGTAAGTTATAGATCTAGTTATGTAATTTTTGCTCCAACTGAGGCTGAGCAAATTTTAGTTTGACATTATGAGACTCACCAGCCAGGACACATGAGTAGTTTAAAATGGCTACAATTAAGTCACCACAAAATTTACTATTAGCTTCAGTTAAAACTCTTCACAGTAGAAAGATGCTGCTGCAGGTTTTATCATTTTGTTACATTATTTCCTTTTCCTTTCCGGTCCAATTATACCAAAGTAAACTTCTCTTGGCTAGAAGCTCTGAATATAAAATCCAACTTTTTTTAAAAAATAAATATATAGTTCACTGAACTTTTATAATCTCGGCATTCTTCTTGTGCAGTATCGAGAGCGACTTATCTTCATTGGGCAAAACATTGATGAAGAGTTCAGCAATCAAGTTTTGGCCACAATGCTATATCTTGACAGCATTGAAAATTCCAAGAAACTCTATATGTACATAAATGGCCCAGGTGGAGATGTGAGTTATATCTTTTATTGGGATCTAGTCCATCATAATTATCTGTTATATTTTCCTTTTCTCTTGGTTATATTCTAATGGTTCGTTTAAGCATTAATTTTCTGATGAAACCATCCATCTTTGCAGCTAACTCCAAGTATGGCCATCTACGATACAATGCAGAGCTTAAATAGTCCTGTAGCTACCCATTGCGTGGGTTATGCCTATAATCTGGCAGCCTTTCTTCTAGCAGCTGGAGAAAAGGTAAATACAGATGTAATTATTGTCAAACAGAAGTTGGAATTTGTAGGGAGTTCTTCAGTATGGTAAACGTGACCGCTATTTTTTCAGCCAGTTAAATCATTAATGTCCATCCAAACATATCTTATGTGACTTGATAAATAGATCTCAACCCTTTTATTAGCATTGAATAAAATTGGAAATGCTCATTGCTTTTATTTAACTGTCCCCAACCCATGCTTTATGAAATCTGTTTCTCCTTGCTTGTTGGCCTCCTTTTATCTCTTTTAAATCTTACCACCCCTTTCCATGTCAAGGGTAACCGCTTTTCTATGCCTCTATCAAGAATTGCTTTGCAATCCCCAGCTGGATCTGCTCGTGGCCAGGTATCATTAATTTGTTTTATCATGTCATGCTAATTGATTGTATATTGCCCTTTTACGTTCTAAACATTTTGTTCGGTCACATTTTTGTCAAAAATCCTTTGGACAGGCTGATGATATTCAAAATGAAGCAAACGAGCTCTTGAGAATCAGGGATTATCTTTATGATGAGCTTTCTAAGAAAACAGGCCAGCCTGTTGAAAAGGTCAGTTCGTTAGCACCATAGCATATAATAATATCTTCATTCATAATGAAACTTGCTATTGGTGGGATAACCAACATGACTTTTTGGTTTATGAACCTTTGAGCTTTTACAAACTTGCAATGACTCGCGCATGCGAATTTTGAGTCTTACCTTGTATTGATTTTGAAATGTTTTTGAGGAATCCAATCTTAACTTAGAGACCTTATAAATCCAAATGCAGATTACCAAGGACTTGAGTCGAATGAAGCGATTTAGTGCTCAGGAAGCTATTGATTATGGACTTATTGACCGTATAGTTAGGCCACCTCGCATTAAGGCTGATGCACCTCGCAAGGATGCTGGAACAGGACTTGGTTAGAGTTAAATCAATCATTCATTTGTATGTTTTTAGGCTCACATGGACCGCACAACGAACTAACTATAATTTATGTATGAAAGTTCGTATTTTGTTTTGATTGATTATATTTAAAAAGCAGTTTTTTGGAAATATAGCGTTTATTGTTCTTTTTTCC

mRNA sequence

TTCAGAATCGGACCCGAAACGGGTGTAGCTCTTTCGCATTGGGTGTTCTGTAATCGACTGGGAATGGCACTCTCTTCTACTCCCTGTCTTCAACCCCAAATTAAAGTTTCTCAGCCTCCTCTCAGCTTTACGACCAAGGTTTACTCGGGACTGAAGCCTCAATCTGCTAGTCCATTCGGAGGAGCAAAACCTAATCTTACTGCTGAATTCTATGGAAAAGTTCATAAAAGTTTACAAGCCAGGACACATAACAAAAAGGCTGCTCGTGCACAATTTCAGATGATGCCTATAGGGACACCAAAGGTGCCTTACAGAACTCCTGGCGAGGGAACTTGGCAATGGGTTGATTTGTGGAATGCCCTGTATCGAGAGCGACTTATCTTCATTGGGCAAAACATTGATGAAGAGTTCAGCAATCAAGTTTTGGCCACAATGCTATATCTTGACAGCATTGAAAATTCCAAGAAACTCTATATGTACATAAATGGCCCAGGTGGAGATCTAACTCCAAGTATGGCCATCTACGATACAATGCAGAGCTTAAATAGTCCTGTAGCTACCCATTGCGTGGGTTATGCCTATAATCTGGCAGCCTTTCTTCTAGCAGCTGGAGAAAAGGGTAACCGCTTTTCTATGCCTCTATCAAGAATTGCTTTGCAATCCCCAGCTGGATCTGCTCGTGGCCAGGCTGATGATATTCAAAATGAAGCAAACGAGCTCTTGAGAATCAGGGATTATCTTTATGATGAGCTTTCTAAGAAAACAGGCCAGCCTGTTGAAAAGATTACCAAGGACTTGAGTCGAATGAAGCGATTTAGTGCTCAGGAAGCTATTGATTATGGACTTATTGACCGTATAGTTAGGCCACCTCGCATTAAGGCTGATGCACCTCGCAAGGATGCTGGAACAGGACTTGGTTAGAGTTAAATCAATCATTCATTTGTATGTTTTTAGGCTCACATGGACCGCACAACGAACTAACTATAATTTATGTATGAAAGTTCGTATTTTGTTTTGATTGATTATATTTAAAAAGCAGTTTTTTGGAAATATAGCGTTTATTGTTCTTTTTTCC

Coding sequence (CDS)

TTCAGAATCGGACCCGAAACGGGTGTAGCTCTTTCGCATTGGGTGTTCTGTAATCGACTGGGAATGGCACTCTCTTCTACTCCCTGTCTTCAACCCCAAATTAAAGTTTCTCAGCCTCCTCTCAGCTTTACGACCAAGGTTTACTCGGGACTGAAGCCTCAATCTGCTAGTCCATTCGGAGGAGCAAAACCTAATCTTACTGCTGAATTCTATGGAAAAGTTCATAAAAGTTTACAAGCCAGGACACATAACAAAAAGGCTGCTCGTGCACAATTTCAGATGATGCCTATAGGGACACCAAAGGTGCCTTACAGAACTCCTGGCGAGGGAACTTGGCAATGGGTTGATTTGTGGAATGCCCTGTATCGAGAGCGACTTATCTTCATTGGGCAAAACATTGATGAAGAGTTCAGCAATCAAGTTTTGGCCACAATGCTATATCTTGACAGCATTGAAAATTCCAAGAAACTCTATATGTACATAAATGGCCCAGGTGGAGATCTAACTCCAAGTATGGCCATCTACGATACAATGCAGAGCTTAAATAGTCCTGTAGCTACCCATTGCGTGGGTTATGCCTATAATCTGGCAGCCTTTCTTCTAGCAGCTGGAGAAAAGGGTAACCGCTTTTCTATGCCTCTATCAAGAATTGCTTTGCAATCCCCAGCTGGATCTGCTCGTGGCCAGGCTGATGATATTCAAAATGAAGCAAACGAGCTCTTGAGAATCAGGGATTATCTTTATGATGAGCTTTCTAAGAAAACAGGCCAGCCTGTTGAAAAGATTACCAAGGACTTGAGTCGAATGAAGCGATTTAGTGCTCAGGAAGCTATTGATTATGGACTTATTGACCGTATAGTTAGGCCACCTCGCATTAAGGCTGATGCACCTCGCAAGGATGCTGGAACAGGACTTGGTTAG

Protein sequence

FRIGPETGVALSHWVFCNRLGMALSSTPCLQPQIKVSQPPLSFTTKVYSGLKPQSASPFGGAKPNLTAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQVLATMLYLDSIENSKKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLLAAGEKGNRFSMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKITKDLSRMKRFSAQEAIDYGLIDRIVRPPRIKADAPRKDAGTGLG

Homology

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BLAST of ClCG01G003570 vs. Swiss-Prot
Match: CLPR2_ARATH (ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic OS=Arabidopsis thaliana GN=CLPR2 PE=1 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 9.7e-113
Identity = 199/271 (73.43%), Postives = 234/271 (86.35%), Query Frame = 1


Query: 38  QPPLS--FTTKVYSGLKPQSASPFGGAKPNLTAEFYGKVHKSLQARTHNKKAARAQFQMM 97
           QP LS   + K+YSGLKPQSAS       NL  EFYG+V+KSLQ+ T   KA+R++ +MM
Sbjct: 11  QPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSGTG--KASRSRVKMM 70

Query: 98  PIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQVLATMLYLDSIENSK 157
           PIGTP+VPYR   EGTWQWVD+WNALYRER+IFIGQNIDEEFSNQ+LATMLYLD++++S+
Sbjct: 71  PIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSR 130

Query: 158 KLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLLAAGEKGNRFSMPLS 217
           ++YMY+NGPGGDLTPS+AIYDTM+SL SPV THCVG AYNLA FLLAAGEKG+RF+MPLS
Sbjct: 131 RIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLS 190

Query: 218 RIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKITKDLSRMKRFSAQ 277
           RIALQSPAG+ARGQADDIQNEA EL RIRDYL++EL+K TGQP E++ KDLSR+KRF+A+
Sbjct: 191 RIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAE 250

Query: 278 EAIDYGLIDRIVRPPRIKADAPRKDAGTGLG 307
           EAI+YGLID+IVRPPRIK DAPR+D   GLG
Sbjct: 251 EAIEYGLIDKIVRPPRIKEDAPRQDESAGLG 279

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BLAST of ClCG01G003570 vs. Swiss-Prot
Match: CLPP2_THEEB (ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 4.4e-57
Identity = 106/193 (54.92%), Postives = 139/193 (72.02%), Query Frame = 1


Query: 95  MPIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQVLATMLYLDSIENS 154
           MPIG PKVPYR PGE   QW+D++N LYRER+IF+G+ +D+E +NQ++A MLYLDS +  
Sbjct: 1   MPIGVPKVPYRLPGEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPG 60

Query: 155 KKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLLAAGEKGNRFSMPL 214
           K + +YIN PGG +T  MAIYDTMQ + S V T CVG A ++ +FLLAAG KG R ++P 
Sbjct: 61  KDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120

Query: 215 SRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKITKDLSRMKRFSA 274
           SRI +  P+G  RGQA DI+ EA E+LR+R  L +  +  TGQP+EKI +D+ R    SA
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRVRRQLNELYAYHTGQPLEKIERDMDRDFFMSA 180

Query: 275 QEAIDYGLIDRIV 288
           +EA +YGLIDR++
Sbjct: 181 EEAKNYGLIDRVI 193

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BLAST of ClCG01G003570 vs. Swiss-Prot
Match: CLPP3_NOSS1 (Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=clpP3 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 4.1e-55
Identity = 103/193 (53.37%), Postives = 136/193 (70.47%), Query Frame = 1


Query: 95  MPIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQVLATMLYLDSIENS 154
           MPIG PKVPYR PG     W+ +++ LYRER+IF+G+++D+E +NQ++A MLYLDS +  
Sbjct: 1   MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60

Query: 155 KKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLLAAGEKGNRFSMPL 214
           K +Y+YIN PGG +T  +AIYDTMQ + S V T CVG A ++ +FLLAAG KG R ++P 
Sbjct: 61  KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120

Query: 215 SRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKITKDLSRMKRFSA 274
           SRI +  P+G  RGQA DI+ EA E+LRIR  L    +  T QP+ KI KD+ R    SA
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTSQPLAKIEKDMDRDFFMSA 180

Query: 275 QEAIDYGLIDRIV 288
           QEA++YGLIDR++
Sbjct: 181 QEAMEYGLIDRVI 193

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BLAST of ClCG01G003570 vs. Swiss-Prot
Match: CLPP2_ANAVT (ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=clpP2 PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 1.2e-54
Identity = 103/193 (53.37%), Postives = 135/193 (69.95%), Query Frame = 1


Query: 95  MPIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQVLATMLYLDSIENS 154
           MPIG PKVPYR PG     W+ +++ LYRER+IF+G+++D+E +NQ++A MLYLDS +  
Sbjct: 1   MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60

Query: 155 KKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLLAAGEKGNRFSMPL 214
           K +Y+YIN PGG +T  +AIYDTMQ + S V T CVG A ++ +FLLAAG KG R ++P 
Sbjct: 61  KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120

Query: 215 SRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKITKDLSRMKRFSA 274
           SRI +  P+G  RGQA DI+ EA E+LRIR  L    +  T QP+ KI KD+ R    SA
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTNQPLAKIEKDMDRDFFMSA 180

Query: 275 QEAIDYGLIDRIV 288
           QEA +YGLIDR++
Sbjct: 181 QEAKEYGLIDRVI 193

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BLAST of ClCG01G003570 vs. Swiss-Prot
Match: CLPP_OLTVI (ATP-dependent Clp protease proteolytic subunit OS=Oltmannsiellopsis viridis GN=clpP PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.6e-52
Identity = 94/192 (48.96%), Postives = 141/192 (73.44%), Query Frame = 1


Query: 95  MPIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQVLATMLYLDSIENS 154
           MPIG PKVP+R PGE + QWVDL+N LYRER++F+ Q++D+E +NQ++  MLYL++ E S
Sbjct: 1   MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEKS 60

Query: 155 KKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLLAAGEKGNRFSMPL 214
           K LY+YIN PGG +T  +A+YDTM  + + V T CVG A ++A+F+LA G +G R ++P 
Sbjct: 61  KDLYIYINSPGGSVTCGIAVYDTMNYIKADVTTICVGTAASMASFVLAGGTQGKRIALPH 120

Query: 215 SRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKITKDLSRMKRFSA 274
           SRI +  P G +RGQA ++ +E+ E++RIR  +    +++TGQP+ +I++DL R +  SA
Sbjct: 121 SRIMIHQPEGGSRGQASEVLSESEEVMRIRRQVGKIYAQRTGQPLRRISRDLDRDQFLSA 180

Query: 275 QEAIDYGLIDRI 287
           +EA DYG++D++
Sbjct: 181 REAKDYGIVDQV 192

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BLAST of ClCG01G003570 vs. TrEMBL
Match: A0A0A0KKQ7_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_5G157950 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 2.1e-138
Identity = 240/285 (84.21%), Postives = 267/285 (93.68%), Query Frame = 1


Query: 22  MALSSTPCLQPQIKVSQPPLSFTTKVYSGLKPQSASPFGGAKPNLTAEFYGKVHKSLQAR 81
           MA++S PCLQPQIKVSQP LS  TKVY+GLKPQSASPFGGAKPN+TAEFYGKVHKSLQ R
Sbjct: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60

Query: 82  THNKKAARAQFQMMPIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQV 141
           T+NKKAARAQFQMMPIGTP+VPY+TPGEG WQWVDLWNALYRER+IFIG  +DEEFSNQ+
Sbjct: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120

Query: 142 LATMLYLDSIENSKKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLL 201
           LATMLYLDS+E SKKLY+YINGPGGDLTP++A+YDTMQSL SP+ATHC+G AYN+AAFLL
Sbjct: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180

Query: 202 AAGEKGNRFSMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEK 261
           AAGEKGNR +MPLSRIALQSPAGSARG+ADDIQNEAN+LL+IRDYL+DELSKKTGQPVEK
Sbjct: 181 AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK 240

Query: 262 ITKDLSRMKRFSAQEAIDYGLIDRIVRPPRIKADAPRKDAGTGLG 307
           I KDLS  KRF+AQ+A++YGLIDRI RP RIKADAPRKD GTGLG
Sbjct: 241 IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 285

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BLAST of ClCG01G003570 vs. TrEMBL
Match: M5WMW8_PRUPE (ATP-dependent Clp protease proteolytic subunit OS=Prunus persica GN=PRUPE_ppa009510mg PE=3 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 2.9e-132
Identity = 233/282 (82.62%), Postives = 258/282 (91.49%), Query Frame = 1


Query: 25  SSTPCLQPQIKVSQPPLSFTTKVYSGLKPQSASPFGGAKPNLTAEFYGKVHKSLQARTHN 84
           +STP  QPQ +++ PPLS  TK YSGLK QS   FG   PNLT EFYGKV+KSLQ+RT N
Sbjct: 9   TSTPSFQPQARLA-PPLSCATKHYSGLKLQSLGTFGAKNPNLTVEFYGKVNKSLQSRTRN 68

Query: 85  KKAARAQFQMMPIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQVLAT 144
           ++ +RA+  MMPIGTPKVPYRTPGEGTWQWVDLWNALYRER+IFIGQNIDEEFSNQ+LAT
Sbjct: 69  QRPSRARIGMMPIGTPKVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILAT 128

Query: 145 MLYLDSIENSKKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLLAAG 204
           MLYLD+I++SK+LYMYINGPGGDLTPSMAIYDTMQSLNSPV THCVGYAYNLAAFLLAAG
Sbjct: 129 MLYLDTIDSSKRLYMYINGPGGDLTPSMAIYDTMQSLNSPVGTHCVGYAYNLAAFLLAAG 188

Query: 205 EKGNRFSMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKITK 264
           EKGNRF+MPLSRIALQSPAG+ARGQADDIQNEANELLRI+DYLY+EL+K TGQPVEKI K
Sbjct: 189 EKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIKDYLYNELAKNTGQPVEKINK 248

Query: 265 DLSRMKRFSAQEAIDYGLIDRIVRPPRIKADAPRKDAGTGLG 307
           DL RMKRF+AQEA++YGLIDR+VRPPRIKADAP KDAGTGLG
Sbjct: 249 DLGRMKRFNAQEALEYGLIDRVVRPPRIKADAPPKDAGTGLG 289

[Close]

BLAST of ClCG01G003570 vs. TrEMBL
Match: W9RYR6_9ROSA (ATP-dependent Clp protease proteolytic subunit OS=Morus notabilis GN=L484_023199 PE=3 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 5.5e-131
Identity = 230/282 (81.56%), Postives = 258/282 (91.49%), Query Frame = 1


Query: 25  SSTPCLQPQIKVSQPPLSFTTKVYSGLKPQSASPFGGAKPNLTAEFYGKVHKSLQARTHN 84
           +S+P + PQ ++S PP S  TK+YSGLK QS+  FG  KPNLTAEFY KVHKSLQ RT N
Sbjct: 9   ASSPTIHPQPRLSHPPPSCATKLYSGLKLQSSGVFGAGKPNLTAEFYRKVHKSLQPRTRN 68

Query: 85  KKAARAQFQMMPIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQVLAT 144
            KA RAQ  MMPIGTP+VPYRTPGEG+WQWVDLWNALYRER+IF+GQNIDEEFSNQ+LAT
Sbjct: 69  HKATRAQVGMMPIGTPRVPYRTPGEGSWQWVDLWNALYRERVIFLGQNIDEEFSNQILAT 128

Query: 145 MLYLDSIENSKKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLLAAG 204
           MLYLDS++N K+LY+YINGPGGDLTPSMAIYDTMQSL SPV THCVGYAYNLAAFLLAAG
Sbjct: 129 MLYLDSVDN-KRLYLYINGPGGDLTPSMAIYDTMQSLKSPVCTHCVGYAYNLAAFLLAAG 188

Query: 205 EKGNRFSMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKITK 264
           EK NR++MPLSRI+LQSPAG+ARGQADDIQNEANELLRI+DYL++EL+KKTGQPVEKI K
Sbjct: 189 EKANRYAMPLSRISLQSPAGAARGQADDIQNEANELLRIKDYLFNELAKKTGQPVEKINK 248

Query: 265 DLSRMKRFSAQEAIDYGLIDRIVRPPRIKADAPRKDAGTGLG 307
           DLSR+KRF+AQEA++YGLIDRIVRPPRIKADAPRKDAGTGLG
Sbjct: 249 DLSRVKRFNAQEALEYGLIDRIVRPPRIKADAPRKDAGTGLG 289

[Close]

BLAST of ClCG01G003570 vs. TrEMBL
Match: I1K0I6_SOYBN (ATP-dependent Clp protease proteolytic subunit OS=Glycine max GN=GLYMA_05G053600 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 5.7e-128
Identity = 229/289 (79.24%), Postives = 255/289 (88.24%), Query Frame = 1


Query: 20  LGMALSSTPCLQPQIKVSQPPL--SFTTKVYSGLKPQSASPFGGAKPNLTAEFYGKVHKS 79
           L  +++  P       +  PP   S  TK+YSGLK Q+ASPFG AKPN+TAEFYGKVH +
Sbjct: 24  LHFSMAVVPYTTGSAPLLSPPSTSSVATKLYSGLKLQAASPFGAAKPNVTAEFYGKVHNT 83

Query: 80  LQARTHNKKAARAQFQMMPIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEF 139
           L  R  N   + A+ +MMPIGTPKVPYRTPGEGTWQWVD+WNALYRER+IFIGQ IDEEF
Sbjct: 84  LHCRYANHNTSMARIRMMPIGTPKVPYRTPGEGTWQWVDVWNALYRERVIFIGQEIDEEF 143

Query: 140 SNQVLATMLYLDSIENSKKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLA 199
           SNQ+LATMLYLDSIENSKKLYMYINGPGGDLTPSMAIYDTMQSL SPVATHCVGYAY+LA
Sbjct: 144 SNQILATMLYLDSIENSKKLYMYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYSLA 203

Query: 200 AFLLAAGEKGNRFSMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQ 259
           AFLLAAGEKGNR +MPLSR+AL SPAG+ARGQADDIQNEANELLRIRDYL++EL++KTGQ
Sbjct: 204 AFLLAAGEKGNRSAMPLSRVALTSPAGAARGQADDIQNEANELLRIRDYLFNELAQKTGQ 263

Query: 260 PVEKITKDLSRMKRFSAQEAIDYGLIDRIVRPPRIKADAPRKDAGTGLG 307
           PVEKITKDLSRMKRF+AQEA++YGLIDRIVRPPRIKADAPRK+AGTGLG
Sbjct: 264 PVEKITKDLSRMKRFNAQEALEYGLIDRIVRPPRIKADAPRKEAGTGLG 312

[Close]

BLAST of ClCG01G003570 vs. TrEMBL
Match: A0A0B2P4X4_GLYSO (ATP-dependent Clp protease proteolytic subunit OS=Glycine soja GN=glysoja_030905 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 7.4e-128
Identity = 225/265 (84.91%), Postives = 247/265 (93.21%), Query Frame = 1


Query: 42  SFTTKVYSGLKPQSASPFGGAKPNLTAEFYGKVHKSLQARTHNKKAARAQFQMMPIGTPK 101
           S  TK+YSGLK Q+ASPFG AKPN+TAEFYGKVH +L  R  N   + A+ +MMPIGTPK
Sbjct: 21  SVATKLYSGLKLQAASPFGAAKPNVTAEFYGKVHNTLHCRYANHNTSMARIRMMPIGTPK 80

Query: 102 VPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQVLATMLYLDSIENSKKLYMYI 161
           VPYRTPGEGTWQWVD+WNALYRER+IFIGQ IDEEFSNQ+LATMLYLDSIENSKKLYMYI
Sbjct: 81  VPYRTPGEGTWQWVDVWNALYRERVIFIGQEIDEEFSNQILATMLYLDSIENSKKLYMYI 140

Query: 162 NGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLLAAGEKGNRFSMPLSRIALQS 221
           NGPGGDLTPSMAIYDTMQSL SPVATHCVGYAY+LAAFLLAAGEKGNR +MPLSR+AL S
Sbjct: 141 NGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYSLAAFLLAAGEKGNRSAMPLSRVALTS 200

Query: 222 PAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKITKDLSRMKRFSAQEAIDYG 281
           PAG+ARGQADDIQNEANELLRIRDYL++EL++KTGQPVEKITKDLSRMKRF+AQEA++YG
Sbjct: 201 PAGAARGQADDIQNEANELLRIRDYLFNELAQKTGQPVEKITKDLSRMKRFNAQEALEYG 260

Query: 282 LIDRIVRPPRIKADAPRKDAGTGLG 307
           LIDRIVRPPRIKADAPRK+AGTGLG
Sbjct: 261 LIDRIVRPPRIKADAPRKEAGTGLG 285

[Close]

BLAST of ClCG01G003570 vs. TAIR10
Match: AT1G12410.1 (AT1G12410.1 CLP protease proteolytic subunit 2)

HSP 1 Score: 407.9 bits (1047), Expect = 5.5e-114
Identity = 199/271 (73.43%), Postives = 234/271 (86.35%), Query Frame = 1


Query: 38  QPPLS--FTTKVYSGLKPQSASPFGGAKPNLTAEFYGKVHKSLQARTHNKKAARAQFQMM 97
           QP LS   + K+YSGLKPQSAS       NL  EFYG+V+KSLQ+ T   KA+R++ +MM
Sbjct: 11  QPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSGTG--KASRSRVKMM 70

Query: 98  PIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQVLATMLYLDSIENSK 157
           PIGTP+VPYR   EGTWQWVD+WNALYRER+IFIGQNIDEEFSNQ+LATMLYLD++++S+
Sbjct: 71  PIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDSR 130

Query: 158 KLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLLAAGEKGNRFSMPLS 217
           ++YMY+NGPGGDLTPS+AIYDTM+SL SPV THCVG AYNLA FLLAAGEKG+RF+MPLS
Sbjct: 131 RIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPLS 190

Query: 218 RIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKITKDLSRMKRFSAQ 277
           RIALQSPAG+ARGQADDIQNEA EL RIRDYL++EL+K TGQP E++ KDLSR+KRF+A+
Sbjct: 191 RIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFNAE 250

Query: 278 EAIDYGLIDRIVRPPRIKADAPRKDAGTGLG 307
           EAI+YGLID+IVRPPRIK DAPR+D   GLG
Sbjct: 251 EAIEYGLIDKIVRPPRIKEDAPRQDESAGLG 279

[Close]

BLAST of ClCG01G003570 vs. TAIR10
Match: ATCG00670.1 (ATCG00670.1 plastid-encoded CLP P)

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-42
Identity = 84/193 (43.52%), Postives = 124/193 (64.25%), Query Frame = 1


Query: 95  MPIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQVLATMLYLDSIENS 154
           MPIG PKVP+R+PGEG   WVD++N LYRERL F+GQ +D E SNQ+++ M+YL   +++
Sbjct: 1   MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60

Query: 155 KKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLLAAGEKGNRFSMPL 214
           K LY++IN PGG +   MAIYDTMQ +   V T C+G A ++A+F+L  G    R + P 
Sbjct: 61  KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120

Query: 215 SRIALQSPAGS-ARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKITKDLSRMKRFS 274
           +R+ +  PA S    Q  +   EA ELL++R+ +     ++TG+P+  I++D+ R    S
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMS 180

Query: 275 AQEAIDYGLIDRI 287
           A EA  +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193

[Close]

BLAST of ClCG01G003570 vs. TAIR10
Match: AT1G02560.1 (AT1G02560.1 nuclear encoded CLP protease 5)

HSP 1 Score: 151.4 bits (381), Expect = 9.2e-37
Identity = 83/204 (40.69%), Postives = 124/204 (60.78%), Query Frame = 1


Query: 99  TPKVPYRTPGEGTWQWVD-----LWNALYRERLIFIGQNIDEEFSNQVLATMLYLDSIEN 158
           +P  P    G+G    V      + + L++ R+I  G  +D++ +N ++A +LYLD+++ 
Sbjct: 92  SPYFPAYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDP 151

Query: 159 SKKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLLAAGEKGNRFSMP 218
           +K + MY+N PGG +T  MAI+DTM+ +   V+T CVG A ++ AFLL+AG KG R+S+P
Sbjct: 152 TKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLP 211

Query: 219 LSRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKITKDLSRMKRFS 278
            SRI +  P G A+G   DI  +ANE+L  +  L   L+  TGQ +EKI +D  R    S
Sbjct: 212 NSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMS 271

Query: 279 AQEAIDYGLIDRIVRPPRIKADAP 298
           A+EA +YGLID ++  P +KA  P
Sbjct: 272 AKEAKEYGLIDGVIMNP-LKALQP 294

[Close]

BLAST of ClCG01G003570 vs. TAIR10
Match: AT5G23140.1 (AT5G23140.1 nuclear-encoded CLP protease P7)

HSP 1 Score: 143.7 bits (361), Expect = 1.9e-34
Identity = 76/210 (36.19%), Postives = 128/210 (60.95%), Query Frame = 1


Query: 89  RAQFQMMPIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQVLATMLYL 148
           R  + ++P+    + + + GE  +   D+++ L +ER+I I   I+++ S+ V+A +LYL
Sbjct: 27  RRSYSLIPM---VIEHSSRGERAY---DIFSRLLKERIICINGPINDDTSHVVVAQLLYL 86

Query: 149 DSIENSKKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLLAAGEKGN 208
           +S   SK ++MY+N PGG +T  +AIYDTMQ + SP++T C+G A ++A+ LLAAG KG 
Sbjct: 87  ESENPSKPIHMYLNSPGGHVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQ 146

Query: 209 RFSMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKITKDLSR 268
           R S+P + + +  P+G   GQA DI     +++R+ D L +   K TGQP++ +  ++ R
Sbjct: 147 RRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYVKHTGQPLDVVANNMDR 206

Query: 269 MKRFSAQEAIDYGLIDRIV--RPPRIKADA 297
               + +EA  +G+ID ++  RP  +  DA
Sbjct: 207 DHFMTPEEAKAFGIIDEVIDERPLELVKDA 230

[Close]

BLAST of ClCG01G003570 vs. TAIR10
Match: AT5G45390.1 (AT5G45390.1 CLP protease P4)

HSP 1 Score: 133.7 bits (335), Expect = 2.0e-31
Identity = 63/172 (36.63%), Postives = 110/172 (63.95%), Query Frame = 1


Query: 116 DLWNALYRERLIFIGQNIDEEFSNQVLATMLYLDSIENSKKLYMYINGPGGDLTPSMAIY 175
           D+   L RER++F+G +ID+  ++ +++ +L LD+ +  K + ++IN PGG L+ +MAIY
Sbjct: 79  DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIY 138

Query: 176 DTMQSLNSPVATHCVGYAYNLAAFLLAAGEKGNRFSMPLSRIALQSPAGSARGQADDIQN 235
           D +Q + + V+T  +G A + A+ +L AG KG RF+MP +RI +  P G A GQA D++ 
Sbjct: 139 DVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEI 198

Query: 236 EANELLRIRDYLYDELSKKTGQPVEKITKDLSRMKRFSAQEAIDYGLIDRIV 288
           +A E++  ++ +   ++  T +  E++ KD+ R +  S  EA++YGLID ++
Sbjct: 199 QAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVI 250

[Close]

BLAST of ClCG01G003570 vs. NCBI nr
Match: gi|659073620|ref|XP_008437161.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucumis melo])

HSP 1 Score: 541.6 bits (1394), Expect = 9.0e-151
Identity = 261/285 (91.58%), Postives = 277/285 (97.19%), Query Frame = 1


Query: 22  MALSSTPCLQPQIKVSQPPLSFTTKVYSGLKPQSASPFGGAKPNLTAEFYGKVHKSLQAR 81
           MA+SSTPC QPQIKVSQP LSFTTKVYSGLKPQSASPFGG KPN+TAEFYGKVHKSLQAR
Sbjct: 1   MAVSSTPCFQPQIKVSQPSLSFTTKVYSGLKPQSASPFGGVKPNITAEFYGKVHKSLQAR 60

Query: 82  THNKKAARAQFQMMPIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQV 141
           THNKKAARAQFQMMPIGTP+VPYR PGEGTWQWVDLWNALYRER+IFIGQNIDEEFSNQ+
Sbjct: 61  THNKKAARAQFQMMPIGTPRVPYRNPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQI 120

Query: 142 LATMLYLDSIENSKKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLL 201
           LATMLYLDSIE S+K YMYINGPGGDLTP+MA+YDTMQSLNSPVATHCVGYAYN+AAFLL
Sbjct: 121 LATMLYLDSIETSRKFYMYINGPGGDLTPTMALYDTMQSLNSPVATHCVGYAYNMAAFLL 180

Query: 202 AAGEKGNRFSMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEK 261
           AAGEKGNRF+MPLSRIALQSPAGSARGQADDIQNEANELLRIRDYL++ELSKKTGQPVEK
Sbjct: 181 AAGEKGNRFAMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLFEELSKKTGQPVEK 240

Query: 262 ITKDLSRMKRFSAQEAIDYGLIDRIVRPPRIKADAPRKDAGTGLG 307
           I+KDLSR+K F+AQEA+DYGLIDRI RPPRIKADAPRKDAGTGLG
Sbjct: 241 ISKDLSRLKPFNAQEALDYGLIDRIARPPRIKADAPRKDAGTGLG 285

[Close]

BLAST of ClCG01G003570 vs. NCBI nr
Match: gi|449459668|ref|XP_004147568.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Cucumis sativus])

HSP 1 Score: 500.0 bits (1286), Expect = 3.0e-138
Identity = 240/285 (84.21%), Postives = 267/285 (93.68%), Query Frame = 1


Query: 22  MALSSTPCLQPQIKVSQPPLSFTTKVYSGLKPQSASPFGGAKPNLTAEFYGKVHKSLQAR 81
           MA++S PCLQPQIKVSQP LS  TKVY+GLKPQSASPFGGAKPN+TAEFYGKVHKSLQ R
Sbjct: 1   MAVTSIPCLQPQIKVSQPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTR 60

Query: 82  THNKKAARAQFQMMPIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQV 141
           T+NKKAARAQFQMMPIGTP+VPY+TPGEG WQWVDLWNALYRER+IFIG  +DEEFSNQ+
Sbjct: 61  TNNKKAARAQFQMMPIGTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQI 120

Query: 142 LATMLYLDSIENSKKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLL 201
           LATMLYLDS+E SKKLY+YINGPGGDLTP++A+YDTMQSL SP+ATHC+G AYN+AAFLL
Sbjct: 121 LATMLYLDSVEASKKLYIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLL 180

Query: 202 AAGEKGNRFSMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEK 261
           AAGEKGNR +MPLSRIALQSPAGSARG+ADDIQNEAN+LL+IRDYL+DELSKKTGQPVEK
Sbjct: 181 AAGEKGNRSAMPLSRIALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEK 240

Query: 262 ITKDLSRMKRFSAQEAIDYGLIDRIVRPPRIKADAPRKDAGTGLG 307
           I KDLS  KRF+AQ+A++YGLIDRI RP RIKADAPRKD GTGLG
Sbjct: 241 IHKDLSGTKRFNAQQALEYGLIDRIARPARIKADAPRKDDGTGLG 285

[Close]

BLAST of ClCG01G003570 vs. NCBI nr
Match: gi|1009175662|ref|XP_015869008.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 484.6 bits (1246), Expect = 1.3e-133
Identity = 236/282 (83.69%), Postives = 258/282 (91.49%), Query Frame = 1


Query: 25  SSTPCLQPQIKVSQPPLSFTTKVYSGLKPQSASPFGGAKPNLTAEFYGKVHKSLQARTHN 84
           +STP L  Q     PP S  TK+YSGLK QSA PFG  KPNLT EFYGKV+KSLQ R HN
Sbjct: 9   TSTPSLHAQAGHFHPPPSLGTKLYSGLKLQSAGPFGAGKPNLTIEFYGKVNKSLQPRLHN 68

Query: 85  KKAARAQFQMMPIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQVLAT 144
            K +RAQF MMPIGTP+VPYRTPGEGTWQWVDLWNALYRER+IFIGQ+IDEEFSNQ+LAT
Sbjct: 69  HKPSRAQFGMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQHIDEEFSNQILAT 128

Query: 145 MLYLDSIENSKKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLLAAG 204
           MLYLDSI++SKKLYMYINGPGGDLTPSMAIYDTMQSL SPV THCVGYAYNLAAFL+AAG
Sbjct: 129 MLYLDSIDDSKKLYMYINGPGGDLTPSMAIYDTMQSLKSPVGTHCVGYAYNLAAFLVAAG 188

Query: 205 EKGNRFSMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKITK 264
           EKGNRF+MPLSRIALQSPAG+ARGQADDIQNEANELLRIRDYL+++L++KTGQPVEKI K
Sbjct: 189 EKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDYLFNQLAEKTGQPVEKIYK 248

Query: 265 DLSRMKRFSAQEAIDYGLIDRIVRPPRIKADAPRKDAGTGLG 307
           DLSRMKRF+AQEA++YGLIDR+VRPPRIKADAPRKDAGTGLG
Sbjct: 249 DLSRMKRFNAQEALEYGLIDRVVRPPRIKADAPRKDAGTGLG 290

[Close]

BLAST of ClCG01G003570 vs. NCBI nr
Match: gi|595847944|ref|XP_007209429.1| (hypothetical protein PRUPE_ppa009510mg [Prunus persica])

HSP 1 Score: 479.6 bits (1233), Expect = 4.2e-132
Identity = 233/282 (82.62%), Postives = 258/282 (91.49%), Query Frame = 1


Query: 25  SSTPCLQPQIKVSQPPLSFTTKVYSGLKPQSASPFGGAKPNLTAEFYGKVHKSLQARTHN 84
           +STP  QPQ +++ PPLS  TK YSGLK QS   FG   PNLT EFYGKV+KSLQ+RT N
Sbjct: 9   TSTPSFQPQARLA-PPLSCATKHYSGLKLQSLGTFGAKNPNLTVEFYGKVNKSLQSRTRN 68

Query: 85  KKAARAQFQMMPIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQVLAT 144
           ++ +RA+  MMPIGTPKVPYRTPGEGTWQWVDLWNALYRER+IFIGQNIDEEFSNQ+LAT
Sbjct: 69  QRPSRARIGMMPIGTPKVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILAT 128

Query: 145 MLYLDSIENSKKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLLAAG 204
           MLYLD+I++SK+LYMYINGPGGDLTPSMAIYDTMQSLNSPV THCVGYAYNLAAFLLAAG
Sbjct: 129 MLYLDTIDSSKRLYMYINGPGGDLTPSMAIYDTMQSLNSPVGTHCVGYAYNLAAFLLAAG 188

Query: 205 EKGNRFSMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKITK 264
           EKGNRF+MPLSRIALQSPAG+ARGQADDIQNEANELLRI+DYLY+EL+K TGQPVEKI K
Sbjct: 189 EKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIKDYLYNELAKNTGQPVEKINK 248

Query: 265 DLSRMKRFSAQEAIDYGLIDRIVRPPRIKADAPRKDAGTGLG 307
           DL RMKRF+AQEA++YGLIDR+VRPPRIKADAP KDAGTGLG
Sbjct: 249 DLGRMKRFNAQEALEYGLIDRVVRPPRIKADAPPKDAGTGLG 289

[Close]

BLAST of ClCG01G003570 vs. NCBI nr
Match: gi|703143826|ref|XP_010108111.1| (ATP-dependent Clp protease proteolytic subunit-related protein 2 [Morus notabilis])

HSP 1 Score: 475.3 bits (1222), Expect = 7.9e-131
Identity = 230/282 (81.56%), Postives = 258/282 (91.49%), Query Frame = 1


Query: 25  SSTPCLQPQIKVSQPPLSFTTKVYSGLKPQSASPFGGAKPNLTAEFYGKVHKSLQARTHN 84
           +S+P + PQ ++S PP S  TK+YSGLK QS+  FG  KPNLTAEFY KVHKSLQ RT N
Sbjct: 9   ASSPTIHPQPRLSHPPPSCATKLYSGLKLQSSGVFGAGKPNLTAEFYRKVHKSLQPRTRN 68

Query: 85  KKAARAQFQMMPIGTPKVPYRTPGEGTWQWVDLWNALYRERLIFIGQNIDEEFSNQVLAT 144
            KA RAQ  MMPIGTP+VPYRTPGEG+WQWVDLWNALYRER+IF+GQNIDEEFSNQ+LAT
Sbjct: 69  HKATRAQVGMMPIGTPRVPYRTPGEGSWQWVDLWNALYRERVIFLGQNIDEEFSNQILAT 128

Query: 145 MLYLDSIENSKKLYMYINGPGGDLTPSMAIYDTMQSLNSPVATHCVGYAYNLAAFLLAAG 204
           MLYLDS++N K+LY+YINGPGGDLTPSMAIYDTMQSL SPV THCVGYAYNLAAFLLAAG
Sbjct: 129 MLYLDSVDN-KRLYLYINGPGGDLTPSMAIYDTMQSLKSPVCTHCVGYAYNLAAFLLAAG 188

Query: 205 EKGNRFSMPLSRIALQSPAGSARGQADDIQNEANELLRIRDYLYDELSKKTGQPVEKITK 264
           EK NR++MPLSRI+LQSPAG+ARGQADDIQNEANELLRI+DYL++EL+KKTGQPVEKI K
Sbjct: 189 EKANRYAMPLSRISLQSPAGAARGQADDIQNEANELLRIKDYLFNELAKKTGQPVEKINK 248

Query: 265 DLSRMKRFSAQEAIDYGLIDRIVRPPRIKADAPRKDAGTGLG 307
           DLSR+KRF+AQEA++YGLIDRIVRPPRIKADAPRKDAGTGLG
Sbjct: 249 DLSRVKRFNAQEALEYGLIDRIVRPPRIKADAPRKDAGTGLG 289

The following BLAST results are available for this feature:

BLAST of ClCG01G003570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CLPR2_ARATH	9.7e-113	73.43	ATP-dependent Clp protease proteolytic subunit-related protein 2, chloroplastic ...	[more]
CLPP2_THEEB	4.4e-57	54.92	ATP-dependent Clp protease proteolytic subunit 2 OS=Thermosynechococcus elongatu...	[more]
CLPP3_NOSS1	4.1e-55	53.37	Probable ATP-dependent Clp protease proteolytic subunit 3 OS=Nostoc sp. (strain ...	[more]
CLPP2_ANAVT	1.2e-54	53.37	ATP-dependent Clp protease proteolytic subunit 2 OS=Anabaena variabilis (strain ...	[more]
CLPP_OLTVI	5.6e-52	48.96	ATP-dependent Clp protease proteolytic subunit OS=Oltmannsiellopsis viridis GN=c...	[more]

BLAST of ClCG01G003570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KKQ7_CUCSA	2.1e-138	84.21	ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_5G15795...	[more]
M5WMW8_PRUPE	2.9e-132	82.62	ATP-dependent Clp protease proteolytic subunit OS=Prunus persica GN=PRUPE_ppa009...	[more]
W9RYR6_9ROSA	5.5e-131	81.56	ATP-dependent Clp protease proteolytic subunit OS=Morus notabilis GN=L484_023199...	[more]
I1K0I6_SOYBN	5.7e-128	79.24	ATP-dependent Clp protease proteolytic subunit OS=Glycine max GN=GLYMA_05G053600...	[more]
A0A0B2P4X4_GLYSO	7.4e-128	84.91	ATP-dependent Clp protease proteolytic subunit OS=Glycine soja GN=glysoja_030905...	[more]

BLAST of ClCG01G003570 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12410.1	5.5e-114	73.43	CLP protease proteolytic subunit 2	[more]
ATCG00670.1	1.1e-42	43.52	ATCG00670.1 plastid-encoded CLP P	[more]
AT1G02560.1	9.2e-37	40.69	nuclear encoded CLP protease 5	[more]
AT5G23140.1	1.9e-34	36.19	nuclear-encoded CLP protease P7	[more]
AT5G45390.1	2.0e-31	36.63	CLP protease P4	[more]

BLAST of ClCG01G003570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659073620\|ref\|XP_008437161.1\|	9.0e-151	91.58	PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chl...	[more]
gi\|449459668\|ref\|XP_004147568.1\|	3.0e-138	84.21	PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chl...	[more]
gi\|1009175662\|ref\|XP_015869008.1\|	1.3e-133	83.69	PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 2, chl...	[more]
gi\|595847944\|ref\|XP_007209429.1\|	4.2e-132	82.62	hypothetical protein PRUPE_ppa009510mg [Prunus persica]	[more]
gi\|703143826\|ref\|XP_010108111.1\|	7.9e-131	81.56	ATP-dependent Clp protease proteolytic subunit-related protein 2 [Morus notabili...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001907	ClpP
IPR023562	ClpP/TepA

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0035556	intracellular signal transduction
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006508	proteolysis
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0006364	rRNA processing
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0042793	transcription from plastid promoter
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0016020	membrane
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G003570.1	ClCG01G003570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001907	ATP-dependent Clp protease proteolytic subunit	PRINTS	PR00127	CLPPROTEASEP	coord: 208..227 score: 6.5E-33coord: 116..131 score: 6.5E-33coord: 265..284 score: 6.5E-33coord: 156..176 score: 6.5E-33coord: 187..204 score: 6.5
IPR001907	ATP-dependent Clp protease proteolytic subunit	HAMAP	MF_00444	ClpP	coord: 98..290 score: 33
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PANTHER	PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	coord: 41..300 score: 3.1E
IPR023562	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	PFAM	PF00574	CLP_protease	coord: 113..288 score: 2.1
None	No IPR available	PANTHER	PTHR10381:SF15	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT-RELATED PROTEIN 2, CHLOROPLASTIC	coord: 41..300 score: 3.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G003570	MELO3C005589	Melon (DHL92) v3.5.1	mewcgB018
ClCG01G003570	Cla011533	Watermelon (97103) v1	wcgwmB142
ClCG01G003570	Cla97C01G003670	Watermelon (97103) v2	wcgwmbB089
ClCG01G003570	Bhi12G000341	Wax gourd	wcgwgoB193
ClCG01G003570	CmaCh02G015090	Cucurbita maxima (Rimu)	cmawcgB518
ClCG01G003570	CmoCh02G015500	Cucurbita moschata (Rifu)	cmowcgB523
ClCG01G003570	CmoCh15G012330	Cucurbita moschata (Rifu)	cmowcgB247
ClCG01G003570	Lsi09G003700	Bottle gourd (USVL1VR-Ls)	lsiwcgB008
ClCG01G003570	Carg02477	Silver-seed gourd	carwcgB0896

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G003570	Cucumber (Chinese Long) v3	cucwcgB209
ClCG01G003570	Cucumber (Chinese Long) v3	cucwcgB211
ClCG01G003570	Cucumber (Chinese Long) v3	cucwcgB212
ClCG01G003570	Cucumber (Chinese Long) v3	cucwcgB385
ClCG01G003570	Watermelon (97103) v2	wcgwmbB094
ClCG01G003570	Watermelon (97103) v2	wcgwmbB109
ClCG01G003570	Wax gourd	wcgwgoB206
ClCG01G003570	Watermelon (Charleston Gray)	wcgwcgB041
ClCG01G003570	Watermelon (Charleston Gray)	wcgwcgB101
ClCG01G003570	Cucumber (Gy14) v1	cgywcgB445
ClCG01G003570	Cucumber (Gy14) v1	cgywcgB520
ClCG01G003570	Cucumber (Gy14) v1	cgywcgB557
ClCG01G003570	Cucurbita maxima (Rimu)	cmawcgB259
ClCG01G003570	Cucurbita maxima (Rimu)	cmawcgB525
ClCG01G003570	Cucurbita maxima (Rimu)	cmawcgB733
ClCG01G003570	Cucurbita moschata (Rifu)	cmowcgB283
ClCG01G003570	Cucurbita moschata (Rifu)	cmowcgB516
ClCG01G003570	Cucurbita moschata (Rifu)	cmowcgB737
ClCG01G003570	Wild cucumber (PI 183967)	cpiwcgB210
ClCG01G003570	Wild cucumber (PI 183967)	cpiwcgB211
ClCG01G003570	Wild cucumber (PI 183967)	cpiwcgB379
ClCG01G003570	Cucumber (Chinese Long) v2	cuwcgB207
ClCG01G003570	Cucumber (Chinese Long) v2	cuwcgB208
ClCG01G003570	Cucumber (Chinese Long) v2	cuwcgB364
ClCG01G003570	Melon (DHL92) v3.5.1	mewcgB418
ClCG01G003570	Melon (DHL92) v3.5.1	mewcgB422
ClCG01G003570	Watermelon (97103) v1	wcgwmB137
ClCG01G003570	Watermelon (97103) v1	wcgwmB119
ClCG01G003570	Watermelon (97103) v1	wcgwmB134
ClCG01G003570	Cucurbita pepo (Zucchini)	cpewcgB165
ClCG01G003570	Cucurbita pepo (Zucchini)	cpewcgB200
ClCG01G003570	Cucurbita pepo (Zucchini)	cpewcgB638
ClCG01G003570	Cucurbita pepo (Zucchini)	cpewcgB639
ClCG01G003570	Cucurbita pepo (Zucchini)	cpewcgB780
ClCG01G003570	Bottle gourd (USVL1VR-Ls)	lsiwcgB322
ClCG01G003570	Bottle gourd (USVL1VR-Ls)	lsiwcgB327
ClCG01G003570	Bottle gourd (USVL1VR-Ls)	lsiwcgB394
ClCG01G003570	Cucumber (Gy14) v2	cgybwcgB192
ClCG01G003570	Cucumber (Gy14) v2	cgybwcgB191
ClCG01G003570	Cucumber (Gy14) v2	cgybwcgB332
ClCG01G003570	Melon (DHL92) v3.6.1	medwcgB016
ClCG01G003570	Melon (DHL92) v3.6.1	medwcgB408
ClCG01G003570	Melon (DHL92) v3.6.1	medwcgB409
ClCG01G003570	Silver-seed gourd	carwcgB0471
ClCG01G003570	Silver-seed gourd	carwcgB0837
ClCG01G003570	Silver-seed gourd	carwcgB0843
ClCG01G003570	Silver-seed gourd	carwcgB0899
ClCG01G003570	Silver-seed gourd	carwcgB0912