ClCG01G003370 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G003370
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	basic helix-loop-helix (bHLH) DNA-binding superfamily protein LENGTH=230
Location	CG_Chr01 : 3523461 .. 3525070 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATTAGAATGTATTGAATTTCCATTCCCATTTGATCAAGCAGATGAATTATTTCCACTTCCTTCCCTTACCCCTATAGACCTCTCTGTTTCTCAGCCTCCATTGATCTGTTCCAAGAACAAGAATGACAAAAATGCCTCCGAAAAGCCCAAAAATAATCGTCGGCGAAAGTCTCCGAACACTTCCGATGATATCGAAGACGAGAACCCGAACGAACACAAAAAAAAGAAGATCATCCACAGAGATGTTGAACGCCAAAGAAGGCAAGAAATGTCCACTCTTTACTCCACTCTTCGTTCACTTCTCCCGCTTGAATATCTTAAGGTAACACTCATAAAGCATCAATTTTTTTCCTTCATAAAACAATTTGTCTTTGAAGTATTTTTTTAAAAAGCCGAATTATGTTCAAATTAACTTTAAAACGTATATTTGAGCTCATCATTTTTTGTTTTATAAAAATAAGAAATATGATCTTTTTCGCCATTGAGTTCCAAGCATTAGGTATTTGTTTAGCAAGATGTCAAAATGAATTCTTTTAGTTTCTAAATTTTAAAAATAGGTTGAACAAGTTTTTCAGTAATTTTTTATTGCTATTTTAATTATTGGCACGCCATTTTAAATTAAAAATAATCATTAAATAAGAGGATGGAAGGAGAGAGAGAAAATGTAAGTTTTCTTAATTATTATTTTTTTAAAATTTAAAATAATAAAATAATTACTACCTAATTCTAAACTTATTCTAAAAAAATTGGAAGATTACAATGGTAAATTTTGACACCTTATGTACCTACGGATGAAAATTGAAAGACTTAAAAGGGTCAGTCTATCTCAAGGCCATCGTAACACTCTTAGAGCATCAAATGTATTTTTGGGATTGAATGTATAATTGAGCTCATAAATCCTTTTAAAGAAAAATAACAAATATGATTCCAAGATACTATAGAATTGTGAGATCAATAAATGCACTAACATATCTTAACTAGTTGATACATCCATAGATTTAAAGTAATAAAATTAAATAGGATTGTTTTTAGTCATTGAGTTTCCAATATTGGATACATTCAGTCTCTAACATTTGAATAAAAATTCTTTTTTAATTTCAGAACCTTAAAATTCAAAGACTTAAGAGAGGTGATTTGATCAAATGTATAAATCATTTTTTAATTTAAATTTTGTTAATGAAATGACAGGGGAAGCGATCAATATGTGATCACATGCATGAAACAGTGAAGTACATACAACATATGCAAAGCAAGATTCAAAAGCTAACGAACAAGAGAGATGAGCTGAAAAAAGACATTGAGGATGATTCAAACATTAGTACAATCGAAACATTAAACTCCTCAAAAAGGGATTGTGTGGTAGTAAAGCCAAGATCGGGAGGATTTCAAATTCTTCTAGACACAGCCACTCAACATAGGCTCCCACTTTCAAATCTTCTAAAATTTCTACTTACTGAAAGGCTTGAAATCATTAGTTGCCATTCCACCAAGATAAATGACAGGTTCCTCCACACTATTGAATCTGAAGCTATCGATATTGGAACCATCGATGTGTCGGAACTCCAACATAAATTGACCAATTTAGAATATTTTCCATTAGATTAA

mRNA sequence

ATGGAATTAGAATGTATTGAATTTCCATTCCCATTTGATCAAGCAGATGAATTATTTCCACTTCCTTCCCTTACCCCTATAGACCTCTCTGTTTCTCAGCCTCCATTGATCTGTTCCAAGAACAAGAATGACAAAAATGCCTCCGAAAAGCCCAAAAATAATCGTCGGCGAAAGTCTCCGAACACTTCCGATGATATCGAAGACGAGAACCCGAACGAACACAAAAAAAAGAAGATCATCCACAGAGATGTTGAACGCCAAAGAAGGCAAGAAATGTCCACTCTTTACTCCACTCTTCGTTCACTTCTCCCGCTTGAATATCTTAAGGGGAAGCGATCAATATGTGATCACATGCATGAAACAGTGAAGTACATACAACATATGCAAAGCAAGATTCAAAAGCTAACGAACAAGAGAGATGAGCTGAAAAAAGACATTGAGGATGATTCAAACATTAGTACAATCGAAACATTAAACTCCTCAAAAAGGGATTGTGTGGTAGTAAAGCCAAGATCGGGAGGATTTCAAATTCTTCTAGACACAGCCACTCAACATAGGCTCCCACTTTCAAATCTTCTAAAATTTCTACTTACTGAAAGGCTTGAAATCATTAGTTGCCATTCCACCAAGATAAATGACAGGTTCCTCCACACTATTGAATCTGAAGCTATCGATATTGGAACCATCGATGTGTCGGAACTCCAACATAAATTGACCAATTTAGAATATTTTCCATTAGATTAA

Coding sequence (CDS)

ATGGAATTAGAATGTATTGAATTTCCATTCCCATTTGATCAAGCAGATGAATTATTTCCACTTCCTTCCCTTACCCCTATAGACCTCTCTGTTTCTCAGCCTCCATTGATCTGTTCCAAGAACAAGAATGACAAAAATGCCTCCGAAAAGCCCAAAAATAATCGTCGGCGAAAGTCTCCGAACACTTCCGATGATATCGAAGACGAGAACCCGAACGAACACAAAAAAAAGAAGATCATCCACAGAGATGTTGAACGCCAAAGAAGGCAAGAAATGTCCACTCTTTACTCCACTCTTCGTTCACTTCTCCCGCTTGAATATCTTAAGGGGAAGCGATCAATATGTGATCACATGCATGAAACAGTGAAGTACATACAACATATGCAAAGCAAGATTCAAAAGCTAACGAACAAGAGAGATGAGCTGAAAAAAGACATTGAGGATGATTCAAACATTAGTACAATCGAAACATTAAACTCCTCAAAAAGGGATTGTGTGGTAGTAAAGCCAAGATCGGGAGGATTTCAAATTCTTCTAGACACAGCCACTCAACATAGGCTCCCACTTTCAAATCTTCTAAAATTTCTACTTACTGAAAGGCTTGAAATCATTAGTTGCCATTCCACCAAGATAAATGACAGGTTCCTCCACACTATTGAATCTGAAGCTATCGATATTGGAACCATCGATGTGTCGGAACTCCAACATAAATTGACCAATTTAGAATATTTTCCATTAGATTAA

Protein sequence

MELECIEFPFPFDQADELFPLPSLTPIDLSVSQPPLICSKNKNDKNASEKPKNNRRRKSPNTSDDIEDENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYIQHMQSKIQKLTNKRDELKKDIEDDSNISTIETLNSSKRDCVVVKPRSGGFQILLDTATQHRLPLSNLLKFLLTERLEIISCHSTKINDRFLHTIESEAIDIGTIDVSELQHKLTNLEYFPLD

Homology

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BLAST of ClCG01G003370 vs. Swiss-Prot
Match: BH126_ARATH (Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.5e-31
Identity = 73/207 (35.27%), Postives = 125/207 (60.39%), Query Frame = 1


Query: 40  KNKNDKNAS-EKPKNNRRRKSPNTSDDIEDENPNEHKKKKIIHRDVERQRRQEMSTLYST 99
           KN N K    ++P ++      +       E  +  KKKK++HRD+ERQRRQEM+TL++T
Sbjct: 5   KNLNPKGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFAT 64

Query: 100 LRSLLPLEYLKGKRSICDHMHETVKYIQHMQSKIQKLTNKRDELKKDI-----EDDSNIS 159
           LR+ LPL+Y+KGKR++ DH++  V +I+  +++I++L+ +RDEL ++       +     
Sbjct: 65  LRTHLPLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGK 124

Query: 160 TIETLNSSKRDCVVVKPRSGGFQILL--DTATQHRLPLSNLLKFLLTERLEIISCHSTKI 219
           T   +  S+   V+V+P   G ++++  +++    LPLS +L+ +  + LE++S  +T++
Sbjct: 125 TGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRV 184

Query: 220 NDRFLHTIESEAIDIGTIDVSELQHKL 239
           NDR +HTI+ E    G ID+  LQ KL
Sbjct: 185 NDRLMHTIQVEVNSFGCIDLLWLQQKL 211

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BLAST of ClCG01G003370 vs. Swiss-Prot
Match: BH120_ARATH (Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.8e-29
Identity = 71/198 (35.86%), Postives = 121/198 (61.11%), Query Frame = 1


Query: 46  NASEKPKNNRRRKSPNTSDDIEDENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPL 105
           N S  PK  R +        +  E     K+KK++HR++ERQRRQEM+ L+++LRS LPL
Sbjct: 2   NPSNNPKKTRHQSH------MPQERDETKKEKKLLHRNIERQRRQEMAILFASLRSQLPL 61

Query: 106 EYLKGKRSICDHMHETVKYIQHMQSKIQKLTNKRDELKKDIEDDSNISTIETLNSSKRD- 165
           +Y+KGKR++ DH++  V +I+  Q++I+ L+ +RDELK++I D ++++   + + S R  
Sbjct: 62  KYIKGKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSE 121

Query: 166 --CVVVKPRSGGFQILLDTATQ--HRLPLSNLLKFLLTERLEIISCHSTKINDRFLHTIE 225
              V+V+P   GF++++ +        PLS +L+ L  + LE+IS  + ++N+R ++TI+
Sbjct: 122 PASVMVQPCVSGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQ 181

Query: 226 SEAIDIGTIDVSELQHKL 239
            E       D++ LQ KL
Sbjct: 182 VEVNSFDCFDLAWLQQKL 193

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BLAST of ClCG01G003370 vs. Swiss-Prot
Match: BH055_ARATH (Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 5.0e-27
Identity = 71/180 (39.44%), Postives = 109/180 (60.56%), Query Frame = 1


Query: 72  NEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYIQHMQSK 131
           +E K K+  H+++ERQRRQE ++L+  LR LLP +Y+KGKRS  DH+ E V YI+ +Q K
Sbjct: 70  DEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKK 129

Query: 132 IQKLTNKRDELKKDIEDDSNIS--TIETLNSSKRDC-------VVVKPRSGGFQILLDTA 191
           I++++ KRD +K+ I   S+    +I +L SS   C       VVV+P   G +I++   
Sbjct: 130 IKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSCC 189

Query: 192 TQHRLPLSNLLKFLLTER-LEIISCHSTKINDRFLHTIESEAIDIGTIDVSELQHKLTNL 242
            +H   LS++L+ L  E+   I+SC ST+++  F+HTI SE  +   +  SELQ K+  +
Sbjct: 190 NRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEVEEGIEVYFSELQEKIIKI 249

[Close]

BLAST of ClCG01G003370 vs. Swiss-Prot
Match: BH125_ARATH (Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.6e-25
Identity = 73/195 (37.44%), Postives = 116/195 (59.49%), Query Frame = 1


Query: 68  DENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYIQH 127
           ++N ++ + KK+ HRD+ERQRRQE+S+L+  LR+LLP +Y++GKRS  DH+ + V YI+ 
Sbjct: 65  NKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYIKD 124

Query: 128 MQSKIQKLTNKRDELKKDI-----------EDDSNIST--IETLNSS------KRDCVVV 187
           +Q KI++L  KR+ +KK I           E  S++S+    TL+SS      K   VVV
Sbjct: 125 LQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLSSSCSCVGDKHITVVV 184

Query: 188 KPRSGGFQILLDTAT-QHRLPLSNLLKFLLTE-RLEIISCHSTKINDRFLHTIESEAIDI 242
            P   G +I++     +++  LS++L+ L  E R  ++SC S +   RF+HTI S+  D 
Sbjct: 185 TPCLVGVEIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSARRQQRFMHTIVSQVEDG 244

[Close]

BLAST of ClCG01G003370 vs. Swiss-Prot
Match: BH118_ARATH (Transcription factor bHLH118 OS=Arabidopsis thaliana GN=BHLH118 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.8e-23
Identity = 58/163 (35.58%), Postives = 103/163 (63.19%), Query Frame = 1


Query: 77  KKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYIQHMQSKIQKLT 136
           +K++H+++E++RRQEM++LY++LRSLLPLE+++GKRS  D +   V YI ++Q  I+ + 
Sbjct: 2   EKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDIN 61

Query: 137 NKRDELKKDIEDDSNISTIETLNSSKRDCVVVKPRSGGFQILLDTATQHRLPLSNLLKFL 196
           +KRD+L   +   S  S+ E   +   + VV++P   G +I+L      + P S++L+ L
Sbjct: 62  SKRDDLVL-LSGRSFRSSNEQEWNEISNHVVIRPCLVGIEIVLSIL---QTPFSSVLQVL 121

Query: 197 LTERLEIISCHSTKINDRFLHTIESEAIDIGTIDVSELQHKLT 240
               L ++    + +NDR +HT+++E  D+  ID+++L+  LT
Sbjct: 122 REHGLYVLGYICSSVNDRLIHTLQAEVNDLALIDLADLKDTLT 160

[Close]

BLAST of ClCG01G003370 vs. TrEMBL
Match: A0A0A0KMQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 7.1e-105
Identity = 201/255 (78.82%), Postives = 223/255 (87.45%), Query Frame = 1


Query: 1   MELECIEFPFPFDQADELFPLPSLTPIDLSVSQ-PPLICSKNKNDKNASEKPKNNRRRKS 60
           M+L+CI+ PFPFDQ DELFPLPSL+PI LSV+  PPLI S N  ++N SEKPK  RRRKS
Sbjct: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60

Query: 61  PNTSDDIEDENP--NEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDH 120
           PNTS DIEDENP  NEHKKKKIIHRDVERQRRQEMSTLY+ LRSLLP+EYLKGKRSICDH
Sbjct: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120

Query: 121 MHETVKYIQHMQSKIQKLTNKRDELKKDI---EDDSNISTIETLNSSKRDCVVVKPRS-G 180
           MHETVKYIQHMQ+KIQ L NKRDELKK+I   ED  NI+TIETLNSSKRD V+V PRS G
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG 180

Query: 181 GFQILLDTATQHRLPLSNLLKFLLTERLEIISCHSTKINDRFLHTIESE-AIDIGTIDVS 240
           G QILLDTAT HRLPLSNL+KFL+T+ L+IISCHST+ NDRFLHTIESE A+D+ TID+S
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMS 240

Query: 241 ELQHKLTNLEYFPLD 248
           ELQ+KLTNLEYFPLD
Sbjct: 241 ELQNKLTNLEYFPLD 255

[Close]

BLAST of ClCG01G003370 vs. TrEMBL
Match: A0A097IYP0_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.2e-104
Identity = 200/255 (78.43%), Postives = 223/255 (87.45%), Query Frame = 1


Query: 1   MELECIEFPFPFDQADELFPLPSLTPIDLSVSQ-PPLICSKNKNDKNASEKPKNNRRRKS 60
           M+L+CI+ PFPFDQ DELFPLPSL+PI LSV+  PPLI S N  ++N SEKPK  RRRKS
Sbjct: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60

Query: 61  PNTSDDIEDENP--NEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDH 120
           PNTS DIEDENP  NEHKKKKIIHRDVERQRRQEMSTLY+ LRSLLP+EYLKGKRSICDH
Sbjct: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120

Query: 121 MHETVKYIQHMQSKIQKLTNKRDELKKDI---EDDSNISTIETLNSSKRDCVVVKPRS-G 180
           MHETVKYIQHMQ+KIQ L NKRDELKK+I   ED  NI+TIETLNSSKRD V+V PRS G
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG 180

Query: 181 GFQILLDTATQHRLPLSNLLKFLLTERLEIISCHSTKINDRFLHTIESE-AIDIGTIDVS 240
           G QILLDTAT HRLPLSNL+KFL+T+ L+IISCHST+ NDRFLHTIE+E A+D+ TID+S
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMS 240

Query: 241 ELQHKLTNLEYFPLD 248
           ELQ+KLTNLEYFPLD
Sbjct: 241 ELQNKLTNLEYFPLD 255

[Close]

BLAST of ClCG01G003370 vs. TrEMBL
Match: A0A0A0KKN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 6.1e-72
Identity = 162/261 (62.07%), Postives = 195/261 (74.71%), Query Frame = 1


Query: 1   MELECIEFPFPFDQ-ADELFPLPSLTPID-LSVSQPPLICSKNKNDKNASEKPKNNRRRK 60
           M+L  +E PF FD   DEL PLPSL+ ID   V Q P I  +N N+   S   KN+RR+K
Sbjct: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSIL-ENNNNSTVSPTLKNSRRKK 60

Query: 61  S--PNTSDDIEDEN-PNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSIC 120
               NTSDD +DEN  NEHKKKKI+HRDVERQRRQEMS+LYSTLRSLLP+EYLKGKRSIC
Sbjct: 61  PVPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSIC 120

Query: 121 DHMHETVKYIQHMQSKIQKLTNKRDELKKDIEDDSNISTI--ETLNSSKRDCVVVKPR-- 180
           DHMHETVKYI++MQSKIQ+L +KRDELKK   ++ N   +  ETL S+KRD VVV+ R  
Sbjct: 121 DHMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARDG 180

Query: 181 SGGFQILLDTATQHRLPLSNLLKFLLTERLEIISCHSTKINDRFLHTIESE-AIDIGT-- 240
           SGG Q++LDT TQHRL LSN+L+ L+ +  EI+SC S K+NDRFLHTIES+ A+   T  
Sbjct: 181 SGGIQVILDTPTQHRLTLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNS 240

Query: 241 --IDVSELQHKLTNLEYFPLD 248
             ID+S+LQ+ L NLEY PLD
Sbjct: 241 PLIDISDLQYMLANLEYCPLD 260

[Close]

BLAST of ClCG01G003370 vs. TrEMBL
Match: A0A097IYN6_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 4.7e-64
Identity = 148/258 (57.36%), Postives = 186/258 (72.09%), Query Frame = 1


Query: 1   MELECIEFPFPFDQADELFPLPSLTPIDLSVSQPPLICSKNKNDKNASEKPKNNRRRKS- 60
           ME+   E PF FD  ++L PLPSL     SV  PPL    N+     S+KPKN RR+K  
Sbjct: 1   MEMFNAESPFSFDVGEDLVPLPSLP--SSSVISPPLDNYGNR----VSQKPKNGRRKKPL 60

Query: 61  PNT-SDDIEDENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHM 120
           PNT +DD  DEN +E KKKKIIHRDVERQRRQEMS+LY+TLRSLLPLEYLKGKRSI DHM
Sbjct: 61  PNTCNDDGGDENHDEQKKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHM 120

Query: 121 HETVKYIQHMQSKIQKLTNKRDELKKDIEDDSNIS---TIETLNSSKRDCVVVKPRSG-G 180
            ETV YIQHMQ +IQ+L +KR  L +++   + ++   T ETLNSS+R   VV+ + G G
Sbjct: 121 QETVSYIQHMQRRIQQLKDKRGTL-RELASQTTVAIAGTTETLNSSERASAVVRAKDGIG 180

Query: 181 FQILLDTATQHRLPLSNLLKFLLTERLEIISCHSTKINDRFLHTIESEAI--DIG---TI 240
            Q++LDTAT+ RLPLS  ++ L++E LEI++C S ++N+RF+HTIE + +  D G   TI
Sbjct: 181 IQVVLDTATKQRLPLSIFVQALVSEGLEILNCISNRLNERFIHTIECQPLLNDDGCYPTI 240

Query: 241 DVSELQHKLTNLEYFPLD 248
           DVS LQHKL NLEY+PLD
Sbjct: 241 DVSVLQHKLANLEYYPLD 251

[Close]

BLAST of ClCG01G003370 vs. TrEMBL
Match: B9GKR8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s08380g PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.3e-49
Identity = 106/234 (45.30%), Postives = 151/234 (64.53%), Query Frame = 1


Query: 8   FPFPFDQADELFPLPSLTPIDLSVSQPPLICSKNKND-KNASEKPKNNRRRKSPNTSDDI 67
           F   ++  D+L    S  P     +    +  +   D  + + K ++ RRRKSP     +
Sbjct: 8   FQIDYNSTDDLVQYFSSFPTQQQTTPKDKVPLRPYEDCHDLANKTQHGRRRKSPIALGSV 67

Query: 68  EDENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYIQ 127
           +DENPN++KKKKIIHRD+ERQRRQEM+ LY +LR LLPL+YLKGKRS  DH+H+TV YI+
Sbjct: 68  KDENPNDNKKKKIIHRDIERQRRQEMANLYGSLRCLLPLKYLKGKRSTSDHIHQTVYYIK 127

Query: 128 HMQSKIQKLTNKRDELKKDIEDDSNISTIETLNSSKRDCVVVKPRSGGFQILLDTATQHR 187
           H + KIQKL +K+DELK+ +   S  S +E L   +RD + V+ R  G ++ ++TA +  
Sbjct: 128 HQEEKIQKLIDKKDELKRYL---STSSALENLEGCERDTLTVRTRCVGVEVDINTALKKG 187

Query: 188 LPLSNLLKFLLTERLEIISCHSTKINDRFLHTIESEAIDIGTIDVSELQHKLTN 241
            PLS +L  L+ E   ++SC STK+N+R LH I SE  D  ++D+SELQ KLT+
Sbjct: 188 FPLSRVLAILIEEGFSVVSCISTKVNERMLHNIISEVTDGRSLDISELQQKLTS 238

[Close]

BLAST of ClCG01G003370 vs. TAIR10
Match: AT4G25410.1 (AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 135.6 bits (340), Expect = 4.2e-32
Identity = 73/207 (35.27%), Postives = 125/207 (60.39%), Query Frame = 1


Query: 40  KNKNDKNAS-EKPKNNRRRKSPNTSDDIEDENPNEHKKKKIIHRDVERQRRQEMSTLYST 99
           KN N K    ++P ++      +       E  +  KKKK++HRD+ERQRRQEM+TL++T
Sbjct: 5   KNLNPKGYQRQRPFSSAGESGGSGGSGTAHETDDNKKKKKLLHRDIERQRRQEMATLFAT 64

Query: 100 LRSLLPLEYLKGKRSICDHMHETVKYIQHMQSKIQKLTNKRDELKKDI-----EDDSNIS 159
           LR+ LPL+Y+KGKR++ DH++  V +I+  +++I++L+ +RDEL ++       +     
Sbjct: 65  LRTHLPLKYIKGKRAVSDHVNGAVNFIKDTEARIKELSARRDELSRETGQGYKSNPDPGK 124

Query: 160 TIETLNSSKRDCVVVKPRSGGFQILL--DTATQHRLPLSNLLKFLLTERLEIISCHSTKI 219
           T   +  S+   V+V+P   G ++++  +++    LPLS +L+ +  + LE++S  +T++
Sbjct: 125 TGSDVGKSEPATVMVQPHVSGLEVVVSSNSSGPEALPLSKVLETIQEKGLEVMSSFTTRV 184

Query: 220 NDRFLHTIESEAIDIGTIDVSELQHKL 239
           NDR +HTI+ E    G ID+  LQ KL
Sbjct: 185 NDRLMHTIQVEVNSFGCIDLLWLQQKL 211

[Close]

BLAST of ClCG01G003370 vs. TAIR10
Match: AT5G51790.1 (AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-30
Identity = 71/198 (35.86%), Postives = 121/198 (61.11%), Query Frame = 1


Query: 46  NASEKPKNNRRRKSPNTSDDIEDENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPL 105
           N S  PK  R +        +  E     K+KK++HR++ERQRRQEM+ L+++LRS LPL
Sbjct: 2   NPSNNPKKTRHQSH------MPQERDETKKEKKLLHRNIERQRRQEMAILFASLRSQLPL 61

Query: 106 EYLKGKRSICDHMHETVKYIQHMQSKIQKLTNKRDELKKDIEDDSNISTIETLNSSKRD- 165
           +Y+KGKR++ DH++  V +I+  Q++I+ L+ +RDELK++I D ++++   + + S R  
Sbjct: 62  KYIKGKRAMSDHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSE 121

Query: 166 --CVVVKPRSGGFQILLDTATQ--HRLPLSNLLKFLLTERLEIISCHSTKINDRFLHTIE 225
              V+V+P   GF++++ +        PLS +L+ L  + LE+IS  + ++N+R ++TI+
Sbjct: 122 PASVMVQPCVSGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLTARVNERLMYTIQ 181

Query: 226 SEAIDIGTIDVSELQHKL 239
            E       D++ LQ KL
Sbjct: 182 VEVNSFDCFDLAWLQQKL 193

[Close]

BLAST of ClCG01G003370 vs. TAIR10
Match: AT1G12540.1 (AT1G12540.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 122.9 bits (307), Expect = 2.8e-28
Identity = 71/180 (39.44%), Postives = 109/180 (60.56%), Query Frame = 1


Query: 72  NEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYIQHMQSK 131
           +E K K+  H+++ERQRRQE ++L+  LR LLP +Y+KGKRS  DH+ E V YI+ +Q K
Sbjct: 70  DEPKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKK 129

Query: 132 IQKLTNKRDELKKDIEDDSNIS--TIETLNSSKRDC-------VVVKPRSGGFQILLDTA 191
           I++++ KRD +K+ I   S+    +I +L SS   C       VVV+P   G +I++   
Sbjct: 130 IKEVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSCC 189

Query: 192 TQHRLPLSNLLKFLLTER-LEIISCHSTKINDRFLHTIESEAIDIGTIDVSELQHKLTNL 242
            +H   LS++L+ L  E+   I+SC ST+++  F+HTI SE  +   +  SELQ K+  +
Sbjct: 190 NRHESCLSSVLQLLAQEQCFNIVSCISTRLHQGFIHTIASEVEEGIEVYFSELQEKIIKI 249

[Close]

BLAST of ClCG01G003370 vs. TAIR10
Match: AT1G62975.1 (AT1G62975.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 116.7 bits (291), Expect = 2.0e-26
Identity = 73/195 (37.44%), Postives = 116/195 (59.49%), Query Frame = 1


Query: 68  DENPNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYIQH 127
           ++N ++ + KK+ HRD+ERQRRQE+S+L+  LR+LLP +Y++GKRS  DH+ + V YI+ 
Sbjct: 65  NKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQGKRSTSDHIVQAVNYIKD 124

Query: 128 MQSKIQKLTNKRDELKKDI-----------EDDSNIST--IETLNSS------KRDCVVV 187
           +Q KI++L  KR+ +KK I           E  S++S+    TL+SS      K   VVV
Sbjct: 125 LQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSSAASTLSSSCSCVGDKHITVVV 184

Query: 188 KPRSGGFQILLDTAT-QHRLPLSNLLKFLLTE-RLEIISCHSTKINDRFLHTIESEAIDI 242
            P   G +I++     +++  LS++L+ L  E R  ++SC S +   RF+HTI S+  D 
Sbjct: 185 TPCLVGVEIIISCCLGRNKSCLSSVLQMLAQEQRFSVVSCLSARRQQRFMHTIVSQVEDG 244

[Close]

BLAST of ClCG01G003370 vs. TAIR10
Match: AT4G25400.1 (AT4G25400.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 109.4 bits (272), Expect = 3.2e-24
Identity = 58/163 (35.58%), Postives = 103/163 (63.19%), Query Frame = 1


Query: 77  KKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDHMHETVKYIQHMQSKIQKLT 136
           +K++H+++E++RRQEM++LY++LRSLLPLE+++GKRS  D +   V YI ++Q  I+ + 
Sbjct: 2   EKLVHKEIEKRRRQEMASLYASLRSLLPLEFIQGKRSTSDQVKGAVNYIDYLQRNIKDIN 61

Query: 137 NKRDELKKDIEDDSNISTIETLNSSKRDCVVVKPRSGGFQILLDTATQHRLPLSNLLKFL 196
           +KRD+L   +   S  S+ E   +   + VV++P   G +I+L      + P S++L+ L
Sbjct: 62  SKRDDLVL-LSGRSFRSSNEQEWNEISNHVVIRPCLVGIEIVLSIL---QTPFSSVLQVL 121

Query: 197 LTERLEIISCHSTKINDRFLHTIESEAIDIGTIDVSELQHKLT 240
               L ++    + +NDR +HT+++E  D+  ID+++L+  LT
Sbjct: 122 REHGLYVLGYICSSVNDRLIHTLQAEVNDLALIDLADLKDTLT 160

[Close]

BLAST of ClCG01G003370 vs. NCBI nr
Match: gi|700194987|gb|KGN50164.1| (hypothetical protein Csa_5G157230 [Cucumis sativus])

HSP 1 Score: 388.3 bits (996), Expect = 1.0e-104
Identity = 201/255 (78.82%), Postives = 223/255 (87.45%), Query Frame = 1


Query: 1   MELECIEFPFPFDQADELFPLPSLTPIDLSVSQ-PPLICSKNKNDKNASEKPKNNRRRKS 60
           M+L+CI+ PFPFDQ DELFPLPSL+PI LSV+  PPLI S N  ++N SEKPK  RRRKS
Sbjct: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60

Query: 61  PNTSDDIEDENP--NEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDH 120
           PNTS DIEDENP  NEHKKKKIIHRDVERQRRQEMSTLY+ LRSLLP+EYLKGKRSICDH
Sbjct: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120

Query: 121 MHETVKYIQHMQSKIQKLTNKRDELKKDI---EDDSNISTIETLNSSKRDCVVVKPRS-G 180
           MHETVKYIQHMQ+KIQ L NKRDELKK+I   ED  NI+TIETLNSSKRD V+V PRS G
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCG 180

Query: 181 GFQILLDTATQHRLPLSNLLKFLLTERLEIISCHSTKINDRFLHTIESE-AIDIGTIDVS 240
           G QILLDTAT HRLPLSNL+KFL+T+ L+IISCHST+ NDRFLHTIESE A+D+ TID+S
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIESEAAVDVETIDMS 240

Query: 241 ELQHKLTNLEYFPLD 248
           ELQ+KLTNLEYFPLD
Sbjct: 241 ELQNKLTNLEYFPLD 255

[Close]

BLAST of ClCG01G003370 vs. NCBI nr
Match: gi|821595271|ref|NP_001295841.1| (transcription factor bHLH118-like [Cucumis sativus])

HSP 1 Score: 387.5 bits (994), Expect = 1.7e-104
Identity = 200/255 (78.43%), Postives = 223/255 (87.45%), Query Frame = 1


Query: 1   MELECIEFPFPFDQADELFPLPSLTPIDLSVSQ-PPLICSKNKNDKNASEKPKNNRRRKS 60
           M+L+CI+ PFPFDQ DELFPLPSL+PI LSV+  PPLI S N  ++N SEKPK  RRRKS
Sbjct: 1   MDLDCIQSPFPFDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKS 60

Query: 61  PNTSDDIEDENP--NEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICDH 120
           PNTS DIEDENP  NEHKKKKIIHRDVERQRRQEMSTLY+ LRSLLP+EYLKGKRSICDH
Sbjct: 61  PNTSADIEDENPNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDH 120

Query: 121 MHETVKYIQHMQSKIQKLTNKRDELKKDI---EDDSNISTIETLNSSKRDCVVVKPRS-G 180
           MHETVKYIQHMQ+KIQ L NKRDELKK+I   ED  NI+TIETLNSSKRD V+V PRS G
Sbjct: 121 MHETVKYIQHMQTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCG 180

Query: 181 GFQILLDTATQHRLPLSNLLKFLLTERLEIISCHSTKINDRFLHTIESE-AIDIGTIDVS 240
           G QILLDTAT HRLPLSNL+KFL+T+ L+IISCHST+ NDRFLHTIE+E A+D+ TID+S
Sbjct: 181 GVQILLDTATHHRLPLSNLIKFLITQNLQIISCHSTRKNDRFLHTIETEAAVDVETIDMS 240

Query: 241 ELQHKLTNLEYFPLD 248
           ELQ+KLTNLEYFPLD
Sbjct: 241 ELQNKLTNLEYFPLD 255

[Close]

BLAST of ClCG01G003370 vs. NCBI nr
Match: gi|659073658|ref|XP_008437182.1| (PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo])

HSP 1 Score: 297.7 bits (761), Expect = 1.8e-77
Identity = 167/259 (64.48%), Postives = 196/259 (75.68%), Query Frame = 1


Query: 1   MELECIEFPFPFDQADELFPLPSLTPID-LSVSQPPLICSKNKNDK-NASEKPKNNRRRK 60
           M+L  +E PF FD  DEL PLPSL+ ID   V Q P I   N N+    S +PKN RR+K
Sbjct: 1   MDLNNVESPFSFDLGDELLPLPSLSCIDNCFVPQFPSILENNNNNSITVSPRPKNGRRKK 60

Query: 61  SP-NTSDDIEDEN-PNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICD 120
            P NTSDD +DEN  NEHKKKKI+HRDVERQRRQEMS+LYSTLRSLLP+EYLKGKRSICD
Sbjct: 61  PPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICD 120

Query: 121 HMHETVKYIQHMQSKIQKLTNKRDELKKDIEDDSNISTI--ETLNSSKRDCVVVKPR--S 180
           HMHETVKYI++MQSKIQ+L +KRDELKK   ++ N   +  ETL S+KRD VVV+ R  S
Sbjct: 121 HMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPDMVETETLKSTKRDKVVVRARDGS 180

Query: 181 GGFQILLDTATQHRLPLSNLLKFLLTERLEIISCHSTKINDRFLHTIESEAIDIGT---- 240
           GG Q++LDTAT+HRLPLSN+L  L  + LEI+SC S K+NDRFLHTIES+ +   T    
Sbjct: 181 GGIQVILDTATRHRLPLSNILVALTDQGLEILSCSSNKLNDRFLHTIESQPVFTSTNSPI 240

Query: 241 IDVSELQHKLTNLEYFPLD 248
           IDVS LQ+ LTNLEY PLD
Sbjct: 241 IDVSGLQYTLTNLEYCPLD 259

[Close]

BLAST of ClCG01G003370 vs. NCBI nr
Match: gi|659073660|ref|XP_008437183.1| (PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo])

HSP 1 Score: 280.0 bits (715), Expect = 3.9e-72
Identity = 158/258 (61.24%), Postives = 191/258 (74.03%), Query Frame = 1


Query: 1   MELECIEFPFPFDQADELFPLPSLTPID-LSVSQPPLICSKNKNDK-NASEKPKNNRRRK 60
           M+L  +E PF FD  DEL PLPSL+ ID   V Q P I   N N+    S +PKN RR+K
Sbjct: 1   MDLNNVESPFSFDLGDELLPLPSLSCIDNCFVPQFPSILENNNNNSITVSPRPKNGRRKK 60

Query: 61  SP-NTSDDIEDEN-PNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSICD 120
            P NTSDD +DEN  NEHKKKKI+HRDVERQRRQEMS+LYSTLRSLLP+EYLKGKRSI D
Sbjct: 61  PPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSISD 120

Query: 121 HMHETVKYIQHMQSKIQKLTNKRDELKKDIEDDS-NISTIETLNSSKRDCVVVKPRSG-G 180
           HM ETV YIQHMQ +IQ+L +KRD+L++        I T ETLNSS+RD VVV+ + G G
Sbjct: 121 HMQETVSYIQHMQRRIQQLKDKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIG 180

Query: 181 FQILLDTATQHRLPLSNLLKFLLTERLEIISCHSTKINDRFLHTIESEAI--DIG---TI 240
            Q++LDTAT+HRLPLS  ++ L+ E LEI++C S ++N+RF+HTIE + I  D G   TI
Sbjct: 181 IQVVLDTATKHRLPLSIFVQALVAEGLEILNCISNRLNERFIHTIECQTILKDDGCYPTI 240

Query: 241 DVSELQHKLTNLEYFPLD 248
           D S LQHKL NLEY+PLD
Sbjct: 241 DASMLQHKLANLEYYPLD 258

[Close]

BLAST of ClCG01G003370 vs. NCBI nr
Match: gi|449459720|ref|XP_004147594.1| (PREDICTED: transcription factor bHLH36-like [Cucumis sativus])

HSP 1 Score: 278.9 bits (712), Expect = 8.8e-72
Identity = 162/261 (62.07%), Postives = 195/261 (74.71%), Query Frame = 1


Query: 1   MELECIEFPFPFDQ-ADELFPLPSLTPID-LSVSQPPLICSKNKNDKNASEKPKNNRRRK 60
           M+L  +E PF FD   DEL PLPSL+ ID   V Q P I  +N N+   S   KN+RR+K
Sbjct: 1   MDLNNVESPFLFDDLGDELLPLPSLSCIDNCFVPQFPSIL-ENNNNSTVSPTLKNSRRKK 60

Query: 61  S--PNTSDDIEDEN-PNEHKKKKIIHRDVERQRRQEMSTLYSTLRSLLPLEYLKGKRSIC 120
               NTSDD +DEN  NEHKKKKI+HRDVERQRRQEMS+LYSTLRSLLP+EYLKGKRSIC
Sbjct: 61  PVPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSIC 120

Query: 121 DHMHETVKYIQHMQSKIQKLTNKRDELKKDIEDDSNISTI--ETLNSSKRDCVVVKPR-- 180
           DHMHETVKYI++MQSKIQ+L +KRDELKK   ++ N   +  ETL S+KRD VVV+ R  
Sbjct: 121 DHMHETVKYIRYMQSKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARDG 180

Query: 181 SGGFQILLDTATQHRLPLSNLLKFLLTERLEIISCHSTKINDRFLHTIESE-AIDIGT-- 240
           SGG Q++LDT TQHRL LSN+L+ L+ +  EI+SC S K+NDRFLHTIES+ A+   T  
Sbjct: 181 SGGIQVILDTPTQHRLTLSNILEALIDQGFEILSCSSNKLNDRFLHTIESQPAVFTDTNS 240

Query: 241 --IDVSELQHKLTNLEYFPLD 248
             ID+S+LQ+ L NLEY PLD
Sbjct: 241 PLIDISDLQYMLANLEYCPLD 260

The following BLAST results are available for this feature:

BLAST of ClCG01G003370 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH126_ARATH	7.5e-31	35.27	Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1	[more]
BH120_ARATH	1.8e-29	35.86	Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2	[more]
BH055_ARATH	5.0e-27	39.44	Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1	[more]
BH125_ARATH	3.6e-25	37.44	Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125 PE=2 SV=1	[more]
BH118_ARATH	5.8e-23	35.58	Transcription factor bHLH118 OS=Arabidopsis thaliana GN=BHLH118 PE=2 SV=1	[more]

BLAST of ClCG01G003370 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMQ4_CUCSA	7.1e-105	78.82	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1	[more]
A0A097IYP0_CUCSA	1.2e-104	78.43	BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1	[more]
A0A0A0KKN9_CUCSA	6.1e-72	62.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1	[more]
A0A097IYN6_CUCSA	4.7e-64	57.36	BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1	[more]
B9GKR8_POPTR	4.3e-49	45.30	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s08380g PE=4 SV=1	[more]

BLAST of ClCG01G003370 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25410.1	4.2e-32	35.27	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G51790.1	1.0e-30	35.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G12540.1	2.8e-28	39.44	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G62975.1	2.0e-26	37.44	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G25400.1	3.2e-24	35.58	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of ClCG01G003370 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700194987\|gb\|KGN50164.1\|	1.0e-104	78.82	hypothetical protein Csa_5G157230 [Cucumis sativus]	[more]
gi\|821595271\|ref\|NP_001295841.1\|	1.7e-104	78.43	transcription factor bHLH118-like [Cucumis sativus]	[more]
gi\|659073658\|ref\|XP_008437182.1\|	1.8e-77	64.48	PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo]	[more]
gi\|659073660\|ref\|XP_008437183.1\|	3.9e-72	61.24	PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo]	[more]
gi\|449459720\|ref\|XP_004147594.1\|	8.8e-72	62.07	PREDICTED: transcription factor bHLH36-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011598	bHLH_dom
IPR015660	MASH1/Ascl1a-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G003370.1	ClCG01G003370.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	GENE3D	G3DSA:4.10.280.10		coord: 80..147 score: 1.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 80..129 score: 1.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 82..134 score: 6.
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROFILE	PS50888	BHLH	coord: 76..128 score: 13
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	unknown	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 74..146 score: 1.7
IPR015660	Achaete-scute transcription factor-related	PANTHER	PTHR13935	ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED	coord: 39..240 score: 5.6
None	No IPR available	unknown	Coil	Coil	coord: 125..152 scor
None	No IPR available	PANTHER	PTHR13935:SF54	TRANSCRIPTION FACTOR BHLH118-RELATED	coord: 39..240 score: 5.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG01G003370	MELO3C034003.2	Melon (DHL92) v3.6.1	medwcgB016

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G003370	Bottle gourd (USVL1VR-Ls)	lsiwcgB008
ClCG01G003370	Bottle gourd (USVL1VR-Ls)	lsiwcgB322
ClCG01G003370	Bottle gourd (USVL1VR-Ls)	lsiwcgB394
ClCG01G003370	Cucumber (Gy14) v2	cgybwcgB192
ClCG01G003370	Cucumber (Gy14) v2	cgybwcgB191
ClCG01G003370	Cucumber (Gy14) v2	cgybwcgB332
ClCG01G003370	Melon (DHL92) v3.6.1	medwcgB408
ClCG01G003370	Melon (DHL92) v3.6.1	medwcgB409
ClCG01G003370	Silver-seed gourd	carwcgB0471
ClCG01G003370	Silver-seed gourd	carwcgB0843
ClCG01G003370	Silver-seed gourd	carwcgB0898
ClCG01G003370	Silver-seed gourd	carwcgB0912
ClCG01G003370	Cucumber (Chinese Long) v3	cucwcgB209
ClCG01G003370	Cucumber (Chinese Long) v3	cucwcgB211
ClCG01G003370	Cucumber (Chinese Long) v3	cucwcgB212
ClCG01G003370	Cucumber (Chinese Long) v3	cucwcgB385
ClCG01G003370	Watermelon (97103) v2	wcgwmbB089
ClCG01G003370	Watermelon (97103) v2	wcgwmbB094
ClCG01G003370	Watermelon (97103) v2	wcgwmbB109
ClCG01G003370	Wax gourd	wcgwgoB193
ClCG01G003370	Watermelon (Charleston Gray)	wcgwcgB041
ClCG01G003370	Watermelon (Charleston Gray)	wcgwcgB101
ClCG01G003370	Cucurbita moschata (Rifu)	cmowcgB247
ClCG01G003370	Cucumber (Gy14) v1	cgywcgB445
ClCG01G003370	Cucumber (Gy14) v1	cgywcgB520
ClCG01G003370	Cucumber (Gy14) v1	cgywcgB557
ClCG01G003370	Cucurbita maxima (Rimu)	cmawcgB259
ClCG01G003370	Cucurbita maxima (Rimu)	cmawcgB352
ClCG01G003370	Cucurbita maxima (Rimu)	cmawcgB518
ClCG01G003370	Cucurbita maxima (Rimu)	cmawcgB733
ClCG01G003370	Cucurbita moschata (Rifu)	cmowcgB348
ClCG01G003370	Cucurbita moschata (Rifu)	cmowcgB516
ClCG01G003370	Cucurbita moschata (Rifu)	cmowcgB737
ClCG01G003370	Wild cucumber (PI 183967)	cpiwcgB210
ClCG01G003370	Wild cucumber (PI 183967)	cpiwcgB211
ClCG01G003370	Wild cucumber (PI 183967)	cpiwcgB379
ClCG01G003370	Cucumber (Chinese Long) v2	cuwcgB207
ClCG01G003370	Cucumber (Chinese Long) v2	cuwcgB208
ClCG01G003370	Cucumber (Chinese Long) v2	cuwcgB364
ClCG01G003370	Melon (DHL92) v3.5.1	mewcgB018
ClCG01G003370	Melon (DHL92) v3.5.1	mewcgB418
ClCG01G003370	Melon (DHL92) v3.5.1	mewcgB422
ClCG01G003370	Watermelon (97103) v1	wcgwmB137
ClCG01G003370	Watermelon (97103) v1	wcgwmB142
ClCG01G003370	Cucurbita pepo (Zucchini)	cpewcgB023
ClCG01G003370	Cucurbita pepo (Zucchini)	cpewcgB165
ClCG01G003370	Cucurbita pepo (Zucchini)	cpewcgB639
ClCG01G003370	Cucurbita pepo (Zucchini)	cpewcgB780