ClCG01G003350 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G003350
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein LENGTH=204
LocationCG_Chr01 : 3469305 .. 3472572 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TATAGATAAAAAGAGAAACAAAAATAACACTACTCTCTCTCTCTCGTTTAAGGGCCTTCAAAAAATGGAATTCAATTCATTTGATTTTGGAGATGACCTATTCACTCTGCCTTCTCTTCCACCGTCCTCTATCTCTCCGCCCTTGGAAACCAATAACGTCCTGTCCCAAAAGAAAAGAAATGGCCGCCGGAAAAAGGCAGTACCCAACACTCAAAATAATGAAAATGGCGAAGAGATGCCGGACGAACGAAAAAAGAGGAAGTTAATACATAGAGATGTGGAGAGGCAAAGAAGACAAGAAATGTCTTCTCTTTATACCACTCTTCGCTCACTTCTCCCGTTTGAATGTCTCAAGGTATGATTTCATGGTTGGGTTAGATTTTCTTTCTTTTTTTTTTTAATAGAAAAATAATCAAAATTTACTCCAAATTGTATTGATTTTCACCTAAATTTTCAAATTCAATGTATCATAACTTATACACCCTAATTTATCCACTACTTTGGACAAGAAAGAAAGATGAAAAAAAAAAAAAGAAGAAGAAGAAGAAAAAAAAAACGTCATTTTTCCCCATTTTTCGTCCACTTTTGCTCCCATTTTTTCTTTATCAATTTCTTGATAATTCATTACAAAAACTGTGCCAAGTTTAATGAAAACCTATCAAATTTAGAGTACGATAGGATAAATATTGAAGGCTTAAAGTTAGGGGGCACTCTGAAAAAAAAAAAATACATTAATTAAGACTATAATTCATACGTTTGTTGTTTGCAAAAATGACAAAAATAAAGTCAACCCGCATATAAAATGCGGCAAATGCCCTGACTACTTATATACACTTGATACACTATTGTTACACACTTATATACTTGACACACTTAATAATAATGCACTTGAATGATATACTTGATGTATACTTGCAATCATGCACCTGTTTATACTGCTGATAAACTTGATACACTTGATTAATAGACTTGATATACTGGATAATGATGCACTTGACTAATAAACTACTGATAAATTTGTCTATCATTCAATTGTTTATACTGCTGATCAACTTGATACAATTAATTGATATACTTGATAATGATACACTTGGTTGATTAATACTAATAAACTTGATAATCATACACTCTTTTAAAATGCCGATACACTTAACTGATATACTGCTAATACCTTGATTGATATATCGTTGATAAATTTGATAAAGGTGTAGTTGACGGAGTTGAACGAGATATCGACTTCTAAACTCGAGGCATGATAATGATGCTATAGATATATCAACCTAGTTGAAATATCTTGGTGCATCTACTAGGGGTGTACATTAGTCGGTCGATGTCGGTTTTAGGCAAAAACCAACATTGAAAATAGACCATAAAAATTTGTTTATATTCAACCAACGGTCGGGCGGGCCGGTTGGTCGATTTCGTCAATTTATTATTATTTTTTTCTTTTACCTCATCTATTTAGAACTTACTTTCTCATGGGCTTGAGGATAAAAAATTTCCTTCTTTCATGGACTTGTCATTTGTGGATATGGAAAATAAATAACTAAATATATTTTTAAAAAAAAAAAAAAAGGAAAAAGGGAGGGAAAAAAAAATCATTGCATCTTATGGTTGCTCGGTCGAGGGTGTCGATTTTGAGTGGAAAAACCGCCCACCGACCAACCATAGCATATCCCCAACCGATCATGGTCAATTCAGTGTGAAATCCCTGTACATACTTATCTTTTATTTTAATATTAAATTTTGAACGATTTAATGAATATATGTTTAGAATGTTTTCATAAATAGAAAAACAATTAAAAATAATTATAAATATAACAAAATTTCACTTTTTATCTATCATAAACCCTAATAGACATCTATCACTTCACAAAATAGACACCGATAGAATTTAATTTGAGTCTATCGAGTTCTATCACAGATAGAAATTAAAATTTTGCTATATTTGTAAATAATTTAATATTTTTTCTATTTATAATAATTTTTGTATATATTTTTTCTTACCACTTTGGTACACTTAGAACTAGATATATTTGTTTCATTATCATACATTATGTATATCATTTGGATCACAAAATTTAAATTTTGCAATAGATATAAAAATTCTGTGTTATTTTATTTTTTAATTTTAAATTCTATAATATGTATACTTATATAGAAAAATTATTTTAAATAACAAAACAGTTGAAAATATTTACAAATTATAGCAAAATATTACAGTCTATCTGCAATAAATTGCGATAGACTACTATCTGTATCTATCTAGATAGATACAGATAGTCTATTGCAAATAGACAGTAAAATTTTGCTATATTAATAAATATTATGGTTCATTTTACTATATTTGAAAATAGCTCATACTTATATGTTATTTAACATTGAATTTTTCCATTCACAATATATTTATTTATGTATTATTTTAAATTTTAGAACAATTGGAAACAAATGTCTCAGATGAGAAATAATATAGACAATTTTTTTAATTAGTTCAATTTTATTCTTAGTTAAATTTGCATCGGAATTGATTCTATCAGATAATGTAAACTTTTCATAGTTTTTTAACACGTTTTAGTGCAAGTTATATAATTTTATTTAAACCATTAAATGAAGAAGGGGGGGTTATCAACAAGTTTCTAGTTTTTTTTTTTTTATTTAAGAAATAAGAATTCCGAAATAATTAATCATCAAACATATTCTAATTTTTAGTTAGTAGAAAACAAGAAATTAAAATAACAAATTAAAAAAAAATGAAAATGTTATCAAATGTTACCTAACTTTTTTTATTTTTATTTTTTCTTGAAAAGAGATACTTCATAGATAAAGGAGAGCCAGAGGGAAGCTCTCCATTGAGAAGATTTTCAAGTTAATCTTTCTCATTTTGTTTTGAATTTGATACATCCATCTTCTTCCACAAAATACTAACACGTTTTTTACCATTGCATTCCCATAGGGAAAACGGTCAATATCTGACCACATACAGGAGGCAGTTAATTACATTCAATATATGCAAAGAAAAATCCAACAACTATCTGATAAAAGAGATGAGTTGAGAAAACTCTTCGACGAAAATATGGCCTCCGTCGGTATAACGGAAATGCTTAATTCCTCAAAAAGAGATTCGGTGGTGGTGAGGTCGAAAAATGAATTAGAAATTCAAGATGTTTTAGACTCTGCCATAAAACACAGACTTCCTATCTCCAACATTCTTCATGTTTTACTTGGCGAAGGATTCGAAATCCTCAGCTGCATAACCAACCTATTGTAA

mRNA sequence

TATAGATAAAAAGAGAAACAAAAATAACACTACTCTCTCTCTCTCGTTTAAGGGCCTTCAAAAAATGGAATTCAATTCATTTGATTTTGGAGATGACCTATTCACTCTGCCTTCTCTTCCACCGTCCTCTATCTCTCCGCCCTTGGAAACCAATAACGTCCTGTCCCAAAAGAAAAGAAATGGCCGCCGGAAAAAGGCAGTACCCAACACTCAAAATAATGAAAATGGCGAAGAGATGCCGGACGAACGAAAAAAGAGGAAGTTAATACATAGAGATGTGGAGAGGCAAAGAAGACAAGAAATGTCTTCTCTTTATACCACTCTTCGCTCACTTCTCCCGTTTGAATGTCTCAAGGGAAAACGGTCAATATCTGACCACATACAGGAGGCAGTTAATTACATTCAATATATGCAAAGAAAAATCCAACAACTATCTGATAAAAGAGATGAGTTGAGAAAACTCTTCGACGAAAATATGGCCTCCGTCGGTATAACGGAAATGCTTAATTCCTCAAAAAGAGATTCGGTGGTGGTGAGGTCGAAAAATGAATTAGAAATTCAAGATGTTTTAGACTCTGCCATAAAACACAGACTTCCTATCTCCAACATTCTTCATGTTTTACTTGGCGAAGGATTCGAAATCCTCAGCTGCATAACCAACCTATTGTAA

Coding sequence (CDS)

ATGGAATTCAATTCATTTGATTTTGGAGATGACCTATTCACTCTGCCTTCTCTTCCACCGTCCTCTATCTCTCCGCCCTTGGAAACCAATAACGTCCTGTCCCAAAAGAAAAGAAATGGCCGCCGGAAAAAGGCAGTACCCAACACTCAAAATAATGAAAATGGCGAAGAGATGCCGGACGAACGAAAAAAGAGGAAGTTAATACATAGAGATGTGGAGAGGCAAAGAAGACAAGAAATGTCTTCTCTTTATACCACTCTTCGCTCACTTCTCCCGTTTGAATGTCTCAAGGGAAAACGGTCAATATCTGACCACATACAGGAGGCAGTTAATTACATTCAATATATGCAAAGAAAAATCCAACAACTATCTGATAAAAGAGATGAGTTGAGAAAACTCTTCGACGAAAATATGGCCTCCGTCGGTATAACGGAAATGCTTAATTCCTCAAAAAGAGATTCGGTGGTGGTGAGGTCGAAAAATGAATTAGAAATTCAAGATGTTTTAGACTCTGCCATAAAACACAGACTTCCTATCTCCAACATTCTTCATGTTTTACTTGGCGAAGGATTCGAAATCCTCAGCTGCATAACCAACCTATTGTAA

Protein sequence

MEFNSFDFGDDLFTLPSLPPSSISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHIQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELEIQDVLDSAIKHRLPISNILHVLLGEGFEILSCITNLL
Homology
[Close]
BLAST of ClCG01G003350 vs. Swiss-Prot
Match: BH120_ARATH (Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2)

HSP 1 Score: 105.1 bits (261), Expect = 8.8e-22
Identity = 59/158 (37.34%), Postives = 96/158 (60.76%), Query Frame = 1 

Query: 48  NTQNNENGEEMPDER----KKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSIS 107
           N +   +   MP ER    K++KL+HR++ERQRRQEM+ L+ +LRS LP + +KGKR++S
Sbjct: 6   NPKKTRHQSHMPQERDETKKEKKLLHRNIERQRRQEMAILFASLRSQLPLKYIKGKRAMS 65

Query: 108 DHIQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNEL 167
           DH+  AV++I+  Q +I+ LS +RDEL++   +  +  G      SS+ +   V  +  +
Sbjct: 66  DHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSEPASVMVQPCV 125

Query: 168 EIQDVLDSAIKHRL---PISNILHVLLGEGFEILSCIT 199
              +V+ S++   L   P+S +L VL G+G E++S +T
Sbjct: 126 SGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLT 163

[Close]
BLAST of ClCG01G003350 vs. Swiss-Prot
Match: BH126_ARATH (Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 7.5e-21
Identity = 58/147 (39.46%), Postives = 93/147 (63.27%), Query Frame = 1 

Query: 57  EMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHIQEAVNYIQYM 116
           E  D +KK+KL+HRD+ERQRRQEM++L+ TLR+ LP + +KGKR++SDH+  AVN+I+  
Sbjct: 35  ETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHLPLKYIKGKRAVSDHVNGAVNFIKDT 94

Query: 117 QRKIQQLSDKRDELRKLFDENMAS---VGIT-EMLNSSKRDSVVVRSK-NELEIQDVLDS 176
           + +I++LS +RDEL +   +   S    G T   +  S+  +V+V+   + LE+    +S
Sbjct: 95  EARIKELSARRDELSRETGQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNS 154

Query: 177 AIKHRLPISNILHVLLGEGFEILSCIT 199
           +    LP+S +L  +  +G E++S  T
Sbjct: 155 SGPEALPLSKVLETIQEKGLEVMSSFT 181

[Close]
BLAST of ClCG01G003350 vs. Swiss-Prot
Match: BH125_ARATH (Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.1e-19
Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 1 

Query: 39  NGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKG 98
           + +++     T       +  D+R+ +K+ HRD+ERQRRQE+SSL+  LR+LLPF+ ++G
Sbjct: 48  SNKKRSLCDITYGANEANKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQG 107

Query: 99  KRSISDHIQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDS 155
           KRS SDHI +AVNYI+ +Q KI++L++KR+ ++K+      +    E   SS   S
Sbjct: 108 KRSTSDHIVQAVNYIKDLQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSS 163

[Close]
BLAST of ClCG01G003350 vs. Swiss-Prot
Match: BH036_ARATH (Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.1e-19
Identity = 57/144 (39.58%), Postives = 86/144 (59.72%), Query Frame = 1 

Query: 66  KLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHIQEAVNYIQYMQRKIQQLSD 125
           K++HR+ ERQRRQEM+SLY +LRSLLP   +KGKRS SD + EAVNYI+Y+QRKI++LS 
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELSV 62

Query: 126 KRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELEIQDVL---DSAIKHRL----- 185
           +RD+L  L   ++    +       K D  ++  KN + ++  L   +  +  R      
Sbjct: 63  RRDDLMVLSRGSL----LGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQP 122

Query: 186 PISNILHVLLGEGFEILSCITNLL 202
             S++L VL   G  +L+ I++++
Sbjct: 123 RFSSVLQVLSEYGLCLLNSISSIV 142

[Close]
BLAST of ClCG01G003350 vs. Swiss-Prot
Match: BH055_ARATH (Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.7e-18
Identity = 64/208 (30.77%), Postives = 107/208 (51.44%), Query Frame = 1 

Query: 5   SFDFGDDLFTLPSLPPS---SISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDE 64
           +F + +DL     + PS   S   P   N V+         ++    T       +  DE
Sbjct: 12  NFAYENDLDFSSLITPSTRVSFQEPKPCNPVIHSAGIENDGRQNCETTMTLSEIMKGDDE 71

Query: 65  RKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHIQEAVNYIQYMQRKIQ 124
            K ++  H+++ERQRRQE +SL+  LR LLP + +KGKRS +DH+ EAVNYI+ +Q+KI+
Sbjct: 72  PKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKKIK 131

Query: 125 QLSDKRDELRK--LFDENMASVGITEMLNSS-----KRDSVVVRSKNELEIQDVLDSAIK 184
           ++S+KRD +++      +     I  + +S+       +  VV     + ++ V+    +
Sbjct: 132 EVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSCCNR 191

Query: 185 HRLPISNILHVLLGEG-FEILSCITNLL 202
           H   +S++L +L  E  F I+SCI+  L
Sbjct: 192 HESCLSSVLQLLAQEQCFNIVSCISTRL 219

[Close]
BLAST of ClCG01G003350 vs. TrEMBL
Match: A0A097IYN6_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 5.7e-60
Identity = 129/200 (64.50%), Postives = 157/200 (78.50%), Query Frame = 1 

Query: 5   SFDFGDDLFTLPSLPPSS-ISPPLET-NNVLSQKKRNGRRKKAVPNTQNNENGEEMPDER 64
           SFD G+DL  LPSLP SS ISPPL+   N +SQK +NGRRKK +PNT N++ G+E  DE+
Sbjct: 11  SFDVGEDLVPLPSLPSSSVISPPLDNYGNRVSQKPKNGRRKKPLPNTCNDDGGDENHDEQ 70

Query: 65  KKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHIQEAVNYIQYMQRKIQQ 124
           KK+K+IHRDVERQRRQEMSSLYTTLRSLLP E LKGKRSISDH+QE V+YIQ+MQR+IQQ
Sbjct: 71  KKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSYIQHMQRRIQQ 130

Query: 125 LSDKRDELRKLFDE-NMASVGITEMLNSSKRDSVVVRSKNELEIQDVLDSAIKHRLPISN 184
           L DKR  LR+L  +  +A  G TE LNSS+R S VVR+K+ + IQ VLD+A K RLP+S 
Sbjct: 131 LKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDTATKQRLPLSI 190

Query: 185 ILHVLLGEGFEILSCITNLL 202
            +  L+ EG EIL+CI+N L
Sbjct: 191 FVQALVSEGLEILNCISNRL 210

[Close]
BLAST of ClCG01G003350 vs. TrEMBL
Match: A0A0A0KKN9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 8.0e-46
Identity = 113/206 (54.85%), Postives = 142/206 (68.93%), Query Frame = 1 

Query: 7   DFGDDLFTLPSLP--PSSISPP----LETNN--VLSQKKRNGRRKKAVP-NTQNNENGEE 66
           D GD+L  LPSL    +   P     LE NN   +S   +N RRKK VP NT ++++ E 
Sbjct: 14  DLGDELLPLPSLSCIDNCFVPQFPSILENNNNSTVSPTLKNSRRKKPVPANTSDDKDDEN 73

Query: 67  MPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHIQEAVNYIQYMQ 126
             +E KK+K++HRDVERQRRQEMSSLY+TLRSLLP E LKGKRSI DH+ E V YI+YMQ
Sbjct: 74  NSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIRYMQ 133

Query: 127 RKIQQLSDKRDELRKLFDENM-ASVGITEMLNSSKRDSVVVRSKN-ELEIQDVLDSAIKH 186
            KIQ+L DKRDEL+KL   N    +  TE L S+KRD VVVR+++    IQ +LD+  +H
Sbjct: 134 SKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARDGSGGIQVILDTPTQH 193

Query: 187 RLPISNILHVLLGEGFEILSCITNLL 202
           RL +SNIL  L+ +GFEILSC +N L
Sbjct: 194 RLTLSNILEALIDQGFEILSCSSNKL 219

[Close]
BLAST of ClCG01G003350 vs. TrEMBL
Match: A0A0A0KMQ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 8.8e-45
Identity = 105/202 (51.98%), Postives = 138/202 (68.32%), Query Frame = 1 

Query: 6   FDFGDDLFTLPSLPPSSIS----PPL-----ETNNVLSQKKRNGRRKKAVPNTQNNENGE 65
           FD  D+LF LPSL P  +S    PPL      TN  +S+K + GRR+K+   + + E+  
Sbjct: 12  FDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKSPNTSADIEDEN 71

Query: 66  EMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHIQEAVNYIQYM 125
             P+E KK+K+IHRDVERQRRQEMS+LY  LRSLLP E LKGKRSI DH+ E V YIQ+M
Sbjct: 72  PNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDHMHETVKYIQHM 131

Query: 126 QRKIQQLSDKRDELRKLFDENMASVGIT--EMLNSSKRDSVVVRSKNELEIQDVLDSAIK 185
           Q KIQ L +KRDEL+K  ++   S  IT  E LNSSKRDSV+V  ++   +Q +LD+A  
Sbjct: 132 QTKIQMLRNKRDELKKNIEDGEDSRNITTIETLNSSKRDSVLVMPRSCGGVQILLDTATH 191

Query: 186 HRLPISNILHVLLGEGFEILSC 197
           HRLP+SN++  L+ +  +I+SC
Sbjct: 192 HRLPLSNLIKFLITQNLQIISC 213

[Close]
BLAST of ClCG01G003350 vs. TrEMBL
Match: A0A097IYP0_CUCSA (BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 8.8e-45
Identity = 105/202 (51.98%), Postives = 138/202 (68.32%), Query Frame = 1 

Query: 6   FDFGDDLFTLPSLPPSSIS----PPL-----ETNNVLSQKKRNGRRKKAVPNTQNNENGE 65
           FD  D+LF LPSL P  +S    PPL      TN  +S+K + GRR+K+   + + E+  
Sbjct: 12  FDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKSPNTSADIEDEN 71

Query: 66  EMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHIQEAVNYIQYM 125
             P+E KK+K+IHRDVERQRRQEMS+LY  LRSLLP E LKGKRSI DH+ E V YIQ+M
Sbjct: 72  PNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDHMHETVKYIQHM 131

Query: 126 QRKIQQLSDKRDELRKLFDENMASVGIT--EMLNSSKRDSVVVRSKNELEIQDVLDSAIK 185
           Q KIQ L +KRDEL+K  ++   S  IT  E LNSSKRDSV+V  ++   +Q +LD+A  
Sbjct: 132 QTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCGGVQILLDTATH 191

Query: 186 HRLPISNILHVLLGEGFEILSC 197
           HRLP+SN++  L+ +  +I+SC
Sbjct: 192 HRLPLSNLIKFLITQNLQIISC 213

[Close]
BLAST of ClCG01G003350 vs. TrEMBL
Match: B9GKR8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s08380g PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.0e-29
Identity = 74/173 (42.77%), Postives = 119/173 (68.79%), Query Frame = 1 

Query: 26  PLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYT 85
           P E  + L+ K ++GRR+K+ P    +   +E P++ KK+K+IHRD+ERQRRQEM++LY 
Sbjct: 41  PYEDCHDLANKTQHGRRRKS-PIALGSVK-DENPNDNKKKKIIHRDIERQRRQEMANLYG 100

Query: 86  TLRSLLPFECLKGKRSISDHIQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITE 145
           +LR LLP + LKGKRS SDHI + V YI++ + KIQ+L DK+DEL++    + A     E
Sbjct: 101 SLRCLLPLKYLKGKRSTSDHIHQTVYYIKHQEEKIQKLIDKKDELKRYLSTSSA----LE 160

Query: 146 MLNSSKRDSVVVRSKNELEIQDVLDSAIKHRLPISNILHVLLGEGFEILSCIT 199
            L   +RD++ VR++  + ++  +++A+K   P+S +L +L+ EGF ++SCI+
Sbjct: 161 NLEGCERDTLTVRTRC-VGVEVDINTALKKGFPLSRVLAILIEEGFSVVSCIS 206

[Close]
BLAST of ClCG01G003350 vs. TAIR10
Match: AT5G51790.1 (AT5G51790.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 5.0e-23
Identity = 59/158 (37.34%), Postives = 96/158 (60.76%), Query Frame = 1 

Query: 48  NTQNNENGEEMPDER----KKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSIS 107
           N +   +   MP ER    K++KL+HR++ERQRRQEM+ L+ +LRS LP + +KGKR++S
Sbjct: 6   NPKKTRHQSHMPQERDETKKEKKLLHRNIERQRRQEMAILFASLRSQLPLKYIKGKRAMS 65

Query: 108 DHIQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNEL 167
           DH+  AV++I+  Q +I+ LS +RDEL++   +  +  G      SS+ +   V  +  +
Sbjct: 66  DHVNGAVSFIKDTQTRIKDLSARRDELKREIGDPTSLTGSGSGSGSSRSEPASVMVQPCV 125

Query: 168 EIQDVLDSAIKHRL---PISNILHVLLGEGFEILSCIT 199
              +V+ S++   L   P+S +L VL G+G E++S +T
Sbjct: 126 SGFEVVVSSLASGLEAWPLSRVLEVLHGQGLEVISSLT 163

[Close]
BLAST of ClCG01G003350 vs. TAIR10
Match: AT4G25410.1 (AT4G25410.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 4.2e-22
Identity = 58/147 (39.46%), Postives = 93/147 (63.27%), Query Frame = 1 

Query: 57  EMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHIQEAVNYIQYM 116
           E  D +KK+KL+HRD+ERQRRQEM++L+ TLR+ LP + +KGKR++SDH+  AVN+I+  
Sbjct: 35  ETDDNKKKKKLLHRDIERQRRQEMATLFATLRTHLPLKYIKGKRAVSDHVNGAVNFIKDT 94

Query: 117 QRKIQQLSDKRDELRKLFDENMAS---VGIT-EMLNSSKRDSVVVRSK-NELEIQDVLDS 176
           + +I++LS +RDEL +   +   S    G T   +  S+  +V+V+   + LE+    +S
Sbjct: 95  EARIKELSARRDELSRETGQGYKSNPDPGKTGSDVGKSEPATVMVQPHVSGLEVVVSSNS 154

Query: 177 AIKHRLPISNILHVLLGEGFEILSCIT 199
           +    LP+S +L  +  +G E++S  T
Sbjct: 155 SGPEALPLSKVLETIQEKGLEVMSSFT 181

[Close]
BLAST of ClCG01G003350 vs. TAIR10
Match: AT1G62975.1 (AT1G62975.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 96.3 bits (238), Expect = 2.3e-20
Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 1 

Query: 39  NGRRKKAVPNTQNNENGEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKG 98
           + +++     T       +  D+R+ +K+ HRD+ERQRRQE+SSL+  LR+LLPF+ ++G
Sbjct: 48  SNKKRSLCDITYGANEANKNDDDRESKKMKHRDIERQRRQEVSSLFKRLRTLLPFQYIQG 107

Query: 99  KRSISDHIQEAVNYIQYMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDS 155
           KRS SDHI +AVNYI+ +Q KI++L++KR+ ++K+      +    E   SS   S
Sbjct: 108 KRSTSDHIVQAVNYIKDLQIKIKELNEKRNRVKKVISATTTTHSAIEECTSSLSSS 163

[Close]
BLAST of ClCG01G003350 vs. TAIR10
Match: AT5G51780.1 (AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 96.3 bits (238), Expect = 2.3e-20
Identity = 57/144 (39.58%), Postives = 86/144 (59.72%), Query Frame = 1 

Query: 66  KLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHIQEAVNYIQYMQRKIQQLSD 125
           K++HR+ ERQRRQEM+SLY +LRSLLP   +KGKRS SD + EAVNYI+Y+QRKI++LS 
Sbjct: 3   KMMHRETERQRRQEMASLYASLRSLLPLHFIKGKRSTSDQVNEAVNYIKYLQRKIKELSV 62

Query: 126 KRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELEIQDVL---DSAIKHRL----- 185
           +RD+L  L   ++    +       K D  ++  KN + ++  L   +  +  R      
Sbjct: 63  RRDDLMVLSRGSL----LGSSNGDFKEDVEMISGKNHVVVRQCLVGVEIMLSSRCCGGQP 122

Query: 186 PISNILHVLLGEGFEILSCITNLL 202
             S++L VL   G  +L+ I++++
Sbjct: 123 RFSSVLQVLSEYGLCLLNSISSIV 142

[Close]
BLAST of ClCG01G003350 vs. TAIR10
Match: AT1G12540.1 (AT1G12540.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 92.0 bits (227), Expect = 4.4e-19
Identity = 64/208 (30.77%), Postives = 107/208 (51.44%), Query Frame = 1 

Query: 5   SFDFGDDLFTLPSLPPS---SISPPLETNNVLSQKKRNGRRKKAVPNTQNNENGEEMPDE 64
           +F + +DL     + PS   S   P   N V+         ++    T       +  DE
Sbjct: 12  NFAYENDLDFSSLITPSTRVSFQEPKPCNPVIHSAGIENDGRQNCETTMTLSEIMKGDDE 71

Query: 65  RKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHIQEAVNYIQYMQRKIQ 124
            K ++  H+++ERQRRQE +SL+  LR LLP + +KGKRS +DH+ EAVNYI+ +Q+KI+
Sbjct: 72  PKNKRAKHKELERQRRQENTSLFKILRYLLPSQYIKGKRSSADHVLEAVNYIKDLQKKIK 131

Query: 125 QLSDKRDELRK--LFDENMASVGITEMLNSS-----KRDSVVVRSKNELEIQDVLDSAIK 184
           ++S+KRD +++      +     I  + +S+       +  VV     + ++ V+    +
Sbjct: 132 EVSEKRDRIKRSITHPSSRGEFSIRSLASSTCSCVGDTNIAVVVRPCLIGLEIVVSCCNR 191

Query: 185 HRLPISNILHVLLGEG-FEILSCITNLL 202
           H   +S++L +L  E  F I+SCI+  L
Sbjct: 192 HESCLSSVLQLLAQEQCFNIVSCISTRL 219

[Close]
BLAST of ClCG01G003350 vs. NCBI nr
Match: gi|821595469|ref|NP_001295816.1| (transcription factor bHLH118-like [Cucumis sativus])

HSP 1 Score: 238.8 bits (608), Expect = 8.2e-60
Identity = 129/200 (64.50%), Postives = 157/200 (78.50%), Query Frame = 1 

Query: 5   SFDFGDDLFTLPSLPPSS-ISPPLET-NNVLSQKKRNGRRKKAVPNTQNNENGEEMPDER 64
           SFD G+DL  LPSLP SS ISPPL+   N +SQK +NGRRKK +PNT N++ G+E  DE+
Sbjct: 11  SFDVGEDLVPLPSLPSSSVISPPLDNYGNRVSQKPKNGRRKKPLPNTCNDDGGDENHDEQ 70

Query: 65  KKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHIQEAVNYIQYMQRKIQQ 124
           KK+K+IHRDVERQRRQEMSSLYTTLRSLLP E LKGKRSISDH+QE V+YIQ+MQR+IQQ
Sbjct: 71  KKKKIIHRDVERQRRQEMSSLYTTLRSLLPLEYLKGKRSISDHMQETVSYIQHMQRRIQQ 130

Query: 125 LSDKRDELRKLFDE-NMASVGITEMLNSSKRDSVVVRSKNELEIQDVLDSAIKHRLPISN 184
           L DKR  LR+L  +  +A  G TE LNSS+R S VVR+K+ + IQ VLD+A K RLP+S 
Sbjct: 131 LKDKRGTLRELASQTTVAIAGTTETLNSSERASAVVRAKDGIGIQVVLDTATKQRLPLSI 190

Query: 185 ILHVLLGEGFEILSCITNLL 202
            +  L+ EG EIL+CI+N L
Sbjct: 191 FVQALVSEGLEILNCISNRL 210

[Close]
BLAST of ClCG01G003350 vs. NCBI nr
Match: gi|659073660|ref|XP_008437183.1| (PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo])

HSP 1 Score: 224.6 bits (571), Expect = 1.6e-55
Identity = 121/207 (58.45%), Postives = 154/207 (74.40%), Query Frame = 1 

Query: 5   SFDFGDDLFTLPSLP--PSSISPP----LETNN----VLSQKKRNGRRKKAVPNTQNNEN 64
           SFD GD+L  LPSL    +   P     LE NN     +S + +NGRRKK   NT ++++
Sbjct: 11  SFDLGDELLPLPSLSCIDNCFVPQFPSILENNNNNSITVSPRPKNGRRKKPPANTSDDKD 70

Query: 65  GEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHIQEAVNYIQ 124
            E   +E KK+K++HRDVERQRRQEMSSLY+TLRSLLP E LKGKRSISDH+QE V+YIQ
Sbjct: 71  DENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSISDHMQETVSYIQ 130

Query: 125 YMQRKIQQLSDKRDELRKLFDENMASVGITEMLNSSKRDSVVVRSKNELEIQDVLDSAIK 184
           +MQR+IQQL DKRD+LR+L ++ M  +G TE LNSS+RDSVVVR+K+ + IQ VLD+A K
Sbjct: 131 HMQRRIQQLKDKRDKLRELANQTMVIIGTTETLNSSERDSVVVRAKDGIGIQVVLDTATK 190

Query: 185 HRLPISNILHVLLGEGFEILSCITNLL 202
           HRLP+S  +  L+ EG EIL+CI+N L
Sbjct: 191 HRLPLSIFVQALVAEGLEILNCISNRL 217

[Close]
BLAST of ClCG01G003350 vs. NCBI nr
Match: gi|659073658|ref|XP_008437182.1| (PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo])

HSP 1 Score: 198.7 bits (504), Expect = 9.4e-48
Identity = 115/209 (55.02%), Postives = 144/209 (68.90%), Query Frame = 1 

Query: 5   SFDFGDDLFTLPSLP--PSSISPP----LETNN----VLSQKKRNGRRKKAVPNTQNNEN 64
           SFD GD+L  LPSL    +   P     LE NN     +S + +NGRRKK   NT ++++
Sbjct: 11  SFDLGDELLPLPSLSCIDNCFVPQFPSILENNNNNSITVSPRPKNGRRKKPPANTSDDKD 70

Query: 65  GEEMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHIQEAVNYIQ 124
            E   +E KK+K++HRDVERQRRQEMSSLY+TLRSLLP E LKGKRSI DH+ E V YI+
Sbjct: 71  DENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIR 130

Query: 125 YMQRKIQQLSDKRDELRKLFDENM-ASVGITEMLNSSKRDSVVVRSKN-ELEIQDVLDSA 184
           YMQ KIQ+L DKRDEL+KL   N    +  TE L S+KRD VVVR+++    IQ +LD+A
Sbjct: 131 YMQSKIQELCDKRDELKKLQSNNQNPDMVETETLKSTKRDKVVVRARDGSGGIQVILDTA 190

Query: 185 IKHRLPISNILHVLLGEGFEILSCITNLL 202
            +HRLP+SNIL  L  +G EILSC +N L
Sbjct: 191 TRHRLPLSNILVALTDQGLEILSCSSNKL 219

[Close]
BLAST of ClCG01G003350 vs. NCBI nr
Match: gi|449459720|ref|XP_004147594.1| (PREDICTED: transcription factor bHLH36-like [Cucumis sativus])

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-45
Identity = 113/206 (54.85%), Postives = 142/206 (68.93%), Query Frame = 1 

Query: 7   DFGDDLFTLPSLP--PSSISPP----LETNN--VLSQKKRNGRRKKAVP-NTQNNENGEE 66
           D GD+L  LPSL    +   P     LE NN   +S   +N RRKK VP NT ++++ E 
Sbjct: 14  DLGDELLPLPSLSCIDNCFVPQFPSILENNNNSTVSPTLKNSRRKKPVPANTSDDKDDEN 73

Query: 67  MPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHIQEAVNYIQYMQ 126
             +E KK+K++HRDVERQRRQEMSSLY+TLRSLLP E LKGKRSI DH+ E V YI+YMQ
Sbjct: 74  NSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLPIEYLKGKRSICDHMHETVKYIRYMQ 133

Query: 127 RKIQQLSDKRDELRKLFDENM-ASVGITEMLNSSKRDSVVVRSKN-ELEIQDVLDSAIKH 186
            KIQ+L DKRDEL+KL   N    +  TE L S+KRD VVVR+++    IQ +LD+  +H
Sbjct: 134 SKIQELCDKRDELKKLQSNNQNPGMVETETLQSTKRDKVVVRARDGSGGIQVILDTPTQH 193

Query: 187 RLPISNILHVLLGEGFEILSCITNLL 202
           RL +SNIL  L+ +GFEILSC +N L
Sbjct: 194 RLTLSNILEALIDQGFEILSCSSNKL 219

[Close]
BLAST of ClCG01G003350 vs. NCBI nr
Match: gi|821595271|ref|NP_001295841.1| (transcription factor bHLH118-like [Cucumis sativus])

HSP 1 Score: 188.3 bits (477), Expect = 1.3e-44
Identity = 105/202 (51.98%), Postives = 138/202 (68.32%), Query Frame = 1 

Query: 6   FDFGDDLFTLPSLPPSSIS----PPL-----ETNNVLSQKKRNGRRKKAVPNTQNNENGE 65
           FD  D+LF LPSL P  +S    PPL      TN  +S+K + GRR+K+   + + E+  
Sbjct: 12  FDQVDELFPLPSLSPIHLSVADHPPLIASINNTNRNISEKPKKGRRRKSPNTSADIEDEN 71

Query: 66  EMPDERKKRKLIHRDVERQRRQEMSSLYTTLRSLLPFECLKGKRSISDHIQEAVNYIQYM 125
             P+E KK+K+IHRDVERQRRQEMS+LY  LRSLLP E LKGKRSI DH+ E V YIQ+M
Sbjct: 72  PNPNEHKKKKIIHRDVERQRRQEMSTLYAALRSLLPVEYLKGKRSICDHMHETVKYIQHM 131

Query: 126 QRKIQQLSDKRDELRKLFDENMASVGIT--EMLNSSKRDSVVVRSKNELEIQDVLDSAIK 185
           Q KIQ L +KRDEL+K  ++   S  IT  E LNSSKRDSV+V  ++   +Q +LD+A  
Sbjct: 132 QTKIQMLRNKRDELKKNIEDGEDSGNITTIETLNSSKRDSVLVMPRSCGGVQILLDTATH 191

Query: 186 HRLPISNILHVLLGEGFEILSC 197
           HRLP+SN++  L+ +  +I+SC
Sbjct: 192 HRLPLSNLIKFLITQNLQIISC 213

The following BLAST results are available for this feature:
BLAST of ClCG01G003350 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BH120_ARATH8.8e-2237.34Transcription factor bHLH120 OS=Arabidopsis thaliana GN=BHLH120 PE=2 SV=2[more]
BH126_ARATH7.5e-2139.46Transcription factor bHLH126 OS=Arabidopsis thaliana GN=BHLH126 PE=2 SV=1[more]
BH125_ARATH4.1e-1940.52Transcription factor bHLH125 OS=Arabidopsis thaliana GN=BHLH125 PE=2 SV=1[more]
BH036_ARATH4.1e-1939.58Transcription factor bHLH36 OS=Arabidopsis thaliana GN=BHLH36 PE=2 SV=1[more]
BH055_ARATH7.7e-1830.77Transcription factor bHLH55 OS=Arabidopsis thaliana GN=BHLH55 PE=2 SV=1[more]
BLAST of ClCG01G003350 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A097IYN6_CUCSA5.7e-6064.50BHLH transcription factor OS=Cucumis sativus GN=Csa5G156220 PE=2 SV=1[more]
A0A0A0KKN9_CUCSA8.0e-4654.85Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157220 PE=4 SV=1[more]
A0A0A0KMQ4_CUCSA8.8e-4551.98Uncharacterized protein OS=Cucumis sativus GN=Csa_5G157230 PE=4 SV=1[more]
A0A097IYP0_CUCSA8.8e-4551.98BHLH transcription factor OS=Cucumis sativus GN=Csa5G157230 PE=2 SV=1[more]
B9GKR8_POPTR1.0e-2942.77Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s08380g PE=4 SV=1[more]
BLAST of ClCG01G003350 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G51790.15.0e-2337.34 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT4G25410.14.2e-2239.46 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G62975.12.3e-2040.52 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT5G51780.12.3e-2039.58 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
AT1G12540.14.4e-1930.77 basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
BLAST of ClCG01G003350 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|821595469|ref|NP_001295816.1|8.2e-6064.50transcription factor bHLH118-like [Cucumis sativus][more]
gi|659073660|ref|XP_008437183.1|1.6e-5558.45PREDICTED: transcription factor bHLH118-like isoform X2 [Cucumis melo][more]
gi|659073658|ref|XP_008437182.1|9.4e-4855.02PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo][more]
gi|449459720|ref|XP_004147594.1|1.1e-4554.85PREDICTED: transcription factor bHLH36-like [Cucumis sativus][more]
gi|821595271|ref|NP_001295841.1|1.3e-4451.98transcription factor bHLH118-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011598bHLH_dom
IPR015660MASH1/Ascl1a-like
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G003350.1ClCG01G003350.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainGENE3DG3DSA:4.10.280.10coord: 66..132
score: 8.0
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPFAMPF00010HLHcoord: 66..117
score: 8.3
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainSMARTSM00353finuluscoord: 70..122
score: 8.
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainPROFILEPS50888BHLHcoord: 64..116
score: 13
IPR011598Myc-type, basic helix-loop-helix (bHLH) domainunknownSSF47459HLH, helix-loop-helix DNA-binding domaincoord: 61..136
score: 2.75
IPR015660Achaete-scute transcription factor-relatedPANTHERPTHR13935ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATEDcoord: 38..198
score: 1.0
NoneNo IPR availableunknownCoilCoilcoord: 113..136
scor
NoneNo IPR availablePANTHERPTHR13935:SF54TRANSCRIPTION FACTOR BHLH118-RELATEDcoord: 38..198
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG01G003350Csa3G178570Cucumber (Chinese Long) v2cuwcgB208
ClCG01G003350MELO3C006854Melon (DHL92) v3.5.1mewcgB422
ClCG01G003350Cla006231Watermelon (97103) v1wcgwmB137
ClCG01G003350Cla97C01G003410Watermelon (97103) v2wcgwmbB089
ClCG01G003350Cla97C05G089550Watermelon (97103) v2wcgwmbB109
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
ClCG01G003350ClCG05G007630Watermelon (Charleston Gray)wcgwcgB101
The following block(s) are covering this gene:
GeneOrganismBlock
ClCG01G003350Cucurbita pepo (Zucchini)cpewcgB023
ClCG01G003350Cucurbita pepo (Zucchini)cpewcgB165
ClCG01G003350Cucurbita pepo (Zucchini)cpewcgB639
ClCG01G003350Cucurbita pepo (Zucchini)cpewcgB780
ClCG01G003350Bottle gourd (USVL1VR-Ls)lsiwcgB008
ClCG01G003350Bottle gourd (USVL1VR-Ls)lsiwcgB322
ClCG01G003350Bottle gourd (USVL1VR-Ls)lsiwcgB394
ClCG01G003350Cucumber (Gy14) v2cgybwcgB192
ClCG01G003350Cucumber (Gy14) v2cgybwcgB191
ClCG01G003350Cucumber (Gy14) v2cgybwcgB332
ClCG01G003350Melon (DHL92) v3.6.1medwcgB016
ClCG01G003350Melon (DHL92) v3.6.1medwcgB408
ClCG01G003350Melon (DHL92) v3.6.1medwcgB409
ClCG01G003350Silver-seed gourdcarwcgB0471
ClCG01G003350Silver-seed gourdcarwcgB0843
ClCG01G003350Silver-seed gourdcarwcgB0898
ClCG01G003350Silver-seed gourdcarwcgB0912
ClCG01G003350Cucumber (Chinese Long) v3cucwcgB209
ClCG01G003350Cucumber (Chinese Long) v3cucwcgB211
ClCG01G003350Cucumber (Chinese Long) v3cucwcgB212
ClCG01G003350Cucumber (Chinese Long) v3cucwcgB385
ClCG01G003350Watermelon (97103) v2wcgwmbB094
ClCG01G003350Wax gourdwcgwgoB193
ClCG01G003350Watermelon (Charleston Gray)wcgwcgB041
ClCG01G003350Cucurbita moschata (Rifu)cmowcgB247
ClCG01G003350Cucumber (Gy14) v1cgywcgB445
ClCG01G003350Cucumber (Gy14) v1cgywcgB520
ClCG01G003350Cucumber (Gy14) v1cgywcgB557
ClCG01G003350Cucurbita maxima (Rimu)cmawcgB259
ClCG01G003350Cucurbita maxima (Rimu)cmawcgB352
ClCG01G003350Cucurbita maxima (Rimu)cmawcgB518
ClCG01G003350Cucurbita maxima (Rimu)cmawcgB733
ClCG01G003350Cucurbita moschata (Rifu)cmowcgB285
ClCG01G003350Cucurbita moschata (Rifu)cmowcgB348
ClCG01G003350Cucurbita moschata (Rifu)cmowcgB516
ClCG01G003350Cucurbita moschata (Rifu)cmowcgB737
ClCG01G003350Wild cucumber (PI 183967)cpiwcgB210
ClCG01G003350Wild cucumber (PI 183967)cpiwcgB211
ClCG01G003350Wild cucumber (PI 183967)cpiwcgB379
ClCG01G003350Cucumber (Chinese Long) v2cuwcgB207
ClCG01G003350Cucumber (Chinese Long) v2cuwcgB364
ClCG01G003350Melon (DHL92) v3.5.1mewcgB018
ClCG01G003350Melon (DHL92) v3.5.1mewcgB418
ClCG01G003350Watermelon (97103) v1wcgwmB142