ClCG01G002780 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG01G002780
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	GE16202
Location	CG_Chr01 : 2767853 .. 2768563 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGAAGCATCCTTCTCCACATCTCCCTCAAACCATGAATCGAAGACTTGGCAATTTGGAAACTTTAGTGGGTGGTTTACTAGACAAAATGATAGTAATGCAAACCTCAATGGTTGGGCTGCAGCAAGCTGTAGAAAAGCTAAAATTGGAAGTGAGAAGATTGGTCAATAATCCACCAAGAATCAACCAAGAAGCTCCTACATTAAACCAAGAAAATCTGGACAACAGAAGGCAGCTTCAAGATATTCAGCAAAGGCTTGGAAATAACCAGCAAGTCTTACCAAGAAATCAAGAAAAGAACCAACAAGTTCTTCCAAGAAATCAAGAACAGCACCATAATCTCCTGCACAATCAAGAACAATTCGAGAATCTAATCTGCACCCGAGAACGTGGGAATTTTCATCAAGATTTTCACGGGTGTGATCAACAAAATCGTCAAGAATATCAAAGGTGTGATCAACGTGCTCAAAGGCTTCAAGAAGATCCACCCCACCATTTACAAGGGCTTCAAGAAAGACCAAGAAGTCCACCAAGACCCTTCATTCAAAGAAATCAACCGGGTATGAACAATGATAATCCAGTTTTTGAACAACACCATCCTCCTCATAGACCTTTTCTTCAAAAATTGGTTGGTCTTGATCCTAACTCTTATGATGAGAAAGTAAATAATCACCCCTTTCAATATTACCAAAAGATTCAAGGAAAATAG

mRNA sequence

ATGCGGAAGCATCCTTCTCCACATCTCCCTCAAACCATGAATCGAAGACTTGGCAATTTGGAAACTTTAGTGGGTGGTTTACTAGACAAAATGATAGTAATGCAAACCTCAATGGTTGGGCTGCAGCAAGCTGTAGAAAAGCTAAAATTGGAAGTGAGAAGATTGGTCAATAATCCACCAAGAATCAACCAAGAAGCTCCTACATTAAACCAAGAAAATCTGGACAACAGAAGGCAGCTTCAAGATATTCAGCAAAGGCTTGGAAATAACCAGCAAGTCTTACCAAGAAATCAAGAAAAGAACCAACAAGTTCTTCCAAGAAATCAAGAACAGCACCATAATCTCCTGCACAATCAAGAACAATTCGAGAATCTAATCTGCACCCGAGAACGTGGGAATTTTCATCAAGATTTTCACGGGTGTGATCAACAAAATCGTCAAGAATATCAAAGGTGTGATCAACGTGCTCAAAGGCTTCAAGAAGATCCACCCCACCATTTACAAGGGCTTCAAGAAAGACCAAGAAGTCCACCAAGACCCTTCATTCAAAGAAATCAACCGGGTATGAACAATGATAATCCAGTTTTTGAACAACACCATCCTCCTCATAGACCTTTTCTTCAAAAATTGGTTGGTCTTGATCCTAACTCTTATGATGAGAAAGTAAATAATCACCCCTTTCAATATTACCAAAAGATTCAAGGAAAATAG

Coding sequence (CDS)

ATGCGGAAGCATCCTTCTCCACATCTCCCTCAAACCATGAATCGAAGACTTGGCAATTTGGAAACTTTAGTGGGTGGTTTACTAGACAAAATGATAGTAATGCAAACCTCAATGGTTGGGCTGCAGCAAGCTGTAGAAAAGCTAAAATTGGAAGTGAGAAGATTGGTCAATAATCCACCAAGAATCAACCAAGAAGCTCCTACATTAAACCAAGAAAATCTGGACAACAGAAGGCAGCTTCAAGATATTCAGCAAAGGCTTGGAAATAACCAGCAAGTCTTACCAAGAAATCAAGAAAAGAACCAACAAGTTCTTCCAAGAAATCAAGAACAGCACCATAATCTCCTGCACAATCAAGAACAATTCGAGAATCTAATCTGCACCCGAGAACGTGGGAATTTTCATCAAGATTTTCACGGGTGTGATCAACAAAATCGTCAAGAATATCAAAGGTGTGATCAACGTGCTCAAAGGCTTCAAGAAGATCCACCCCACCATTTACAAGGGCTTCAAGAAAGACCAAGAAGTCCACCAAGACCCTTCATTCAAAGAAATCAACCGGGTATGAACAATGATAATCCAGTTTTTGAACAACACCATCCTCCTCATAGACCTTTTCTTCAAAAATTGGTTGGTCTTGATCCTAACTCTTATGATGAGAAAGTAAATAATCACCCCTTTCAATATTACCAAAAGATTCAAGGAAAATAG

Protein sequence

MRKHPSPHLPQTMNRRLGNLETLVGGLLDKMIVMQTSMVGLQQAVEKLKLEVRRLVNNPPRINQEAPTLNQENLDNRRQLQDIQQRLGNNQQVLPRNQEKNQQVLPRNQEQHHNLLHNQEQFENLICTRERGNFHQDFHGCDQQNRQEYQRCDQRAQRLQEDPPHHLQGLQERPRSPPRPFIQRNQPGMNNDNPVFEQHHPPHRPFLQKLVGLDPNSYDEKVNNHPFQYYQKIQGK

Homology

[Close]

BLAST of ClCG01G002780 vs. Swiss-Prot
Match: MED26_DICDI (Putative mediator of RNA polymerase II transcription subunit 26 OS=Dictyostelium discoideum GN=med26 PE=3 SV=2)

HSP 1 Score: 56.2 bits (134), Expect = 5.5e-07
Identity = 40/150 (26.67%), Postives = 73/150 (48.67%), Query Frame = 1


Query: 42  QQAVEKLKLEVRRLVNNPPRINQEAPTLNQENLDNRRQLQDIQQRLGNNQQVLPRNQEKN 101
           QQ  +  +++ ++  N   +  Q+     Q+ +  ++QLQ  QQ L   QQ+  + Q++ 
Sbjct: 335 QQQPQNQQMQQQQQQNQQMQQQQQQNQQMQQQMQQQQQLQQQQQILQQQQQIQQQQQQQQ 394

Query: 102 Q----QVLPRNQEQHHNLLHNQEQFENLICTRERGNFHQDFHGCDQQNRQEYQRCDQRAQ 161
           Q    Q  P+ Q+Q   LL  Q+Q + L+  +++    Q      QQ +Q+ Q+  Q+ Q
Sbjct: 395 QILQPQQQPQQQQQQQQLLQQQQQ-QQLMQQQQQQQQQQ-----QQQQQQQQQQQQQQQQ 454

Query: 162 RLQEDPPHHLQGLQERPRSPPRPFIQRNQP 188
           + Q+ P    Q  Q++P+  P+   Q+ QP
Sbjct: 455 QQQQQPQQQQQIQQQQPQQQPQ---QQQQP 475

HSP 2 Score: 48.5 bits (114), Expect = 1.2e-04
Identity = 41/183 (22.40%), Postives = 80/183 (43.72%), Query Frame = 1


Query: 4   HPSPHLPQTMNRRLGNLETLVGGLLDKMIVMQTSMVGLQQAVEKLKLEVRRLVNNPPRIN 63
           H +  L Q    ++  L+ L   L  ++   Q     LQQ ++  +++ +++ ++    N
Sbjct: 197 HQNRQLQQQQQHQIQQLQ-LQQQLQQQLQQQQQHQQQLQQQMQHQQMQQQQIPHHQQ--N 256

Query: 64  QEAPTLNQENLDNRRQLQDIQQRLGNNQQVLPRNQEKNQQVLPRNQEQHHNLLHNQEQFE 123
           Q+     Q+ + +++Q Q IQQ+    QQ     Q++ QQ     Q Q H   H Q Q +
Sbjct: 257 QQLQQQQQQQVPHQQQNQLIQQQQQQQQQ-----QQQQQQHQQHQQHQQHQQQHQQHQQQ 316

Query: 124 NLICTRERGNFHQDFHGCDQQNRQEYQRCDQRAQRLQEDPPHHLQGLQERPRSPPRPFIQ 183
           +    ++  + HQ  H   QQ + + Q+  Q  Q  Q+   +     Q++     +  +Q
Sbjct: 317 HQQHQQQHQHQHQQQHQQQQQPQNQQQQQPQNQQMQQQQQQNQQMQQQQQQNQQMQQQMQ 371

Query: 184 RNQ 187
           + Q
Sbjct: 377 QQQ 371

HSP 3 Score: 48.5 bits (114), Expect = 1.2e-04
Identity = 36/150 (24.00%), Postives = 69/150 (46.00%), Query Frame = 1


Query: 42  QQAVEKLKLEVRRLVNNPPRINQEAPTLNQENLDNRRQLQDIQQRLGNNQQVL-----PR 101
           QQ  +  +++ ++  N   +   +     Q+     +Q Q IQQ+    QQ+L     P+
Sbjct: 345 QQQQQNQQMQQQQQQNQQMQQQMQQQQQLQQQQQILQQQQQIQQQQQQQQQILQPQQQPQ 404

Query: 102 NQEKNQQVLPRNQEQHHNLLHNQEQFENLICTRERGNFHQDFHGCDQQNRQEYQRCDQRA 161
            Q++ QQ+L   Q+Q   L+  Q+Q +     +++    Q      QQ +Q  Q+   + 
Sbjct: 405 QQQQQQQLL--QQQQQQQLMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQQIQQ 464

Query: 162 QRLQEDPPHHLQGLQERPRSPPRPFIQRNQ 187
           Q+ Q+ P    Q  Q++ +  P+P  Q+ Q
Sbjct: 465 QQPQQQPQQQQQPQQQQSQQQPQPQQQQQQ 492

HSP 4 Score: 37.0 bits (84), Expect = 3.5e-01
Identity = 30/116 (25.86%), Postives = 52/116 (44.83%), Query Frame = 1


Query: 71  QENLDNRRQLQDIQQRLGNNQQVLPRNQEKNQQVLPRNQEQHHNLLHNQEQFENLICTRE 130
           Q++    +Q    QQ+  N QQ  P+NQ+  QQ     Q+Q+  +   Q+Q + +    +
Sbjct: 314 QQHQHQHQQQHQQQQQPQNQQQQQPQNQQMQQQ-----QQQNQQMQQQQQQNQQMQQQMQ 373

Query: 131 RGNFHQDFHGCDQQNRQEYQRCDQRAQRLQEDPPHHLQGLQERPRSPPRPFIQRNQ 187
           +           QQ  Q+ Q+  Q+ Q++Q+      Q LQ  P+  P+   Q+ Q
Sbjct: 374 Q-----------QQQLQQQQQILQQQQQIQQQQQQQQQILQ--PQQQPQQQQQQQQ 411

HSP 5 Score: 33.5 bits (75), Expect = 3.8e+00
Identity = 19/92 (20.65%), Postives = 38/92 (41.30%), Query Frame = 1


Query: 30  KMIVMQTSMVGLQQAVEKLKLEVRRLVNNPPRINQEAPTLNQENLDNRRQLQDIQQRLGN 89
           + ++ Q     L Q  ++ + + ++      +  Q+     Q+    ++Q+Q  Q +   
Sbjct: 410 QQLLQQQQQQQLMQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQQQQQIQQQQPQQQP 469

Query: 90  NQQVLPRNQEKNQQVLPRNQEQHHNLLHNQEQ 122
            QQ  P+ Q+  QQ  P+ Q+Q       Q+Q
Sbjct: 470 QQQQQPQQQQSQQQPQPQQQQQQQQQQQQQQQ 501

[Close]

BLAST of ClCG01G002780 vs. Swiss-Prot
Match: SPT20_DICDI (Transcription factor SPT20 homolog OS=Dictyostelium discoideum GN=DDB_G0280065 PE=3 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-06
Identity = 37/136 (27.21%), Postives = 69/136 (50.74%), Query Frame = 1


Query: 70   NQENLDNRRQLQ-DIQQRLGNNQQVLPRNQEKNQQVLPRNQEQHHNLLHNQE-----QFE 129
            NQ+ L+ ++QLQ  +QQ+    QQ   + Q++NQQ   +NQ+Q  N  + Q+     Q +
Sbjct: 918  NQQQLNQQQQLQYHLQQQKQQQQQQQQQQQQQNQQQQQQNQQQQQNQQNQQQNQQQNQQQ 977

Query: 130  NLICTRERGNFHQDFHGCDQQNRQEYQRCDQRAQRLQEDPPHHL-QGLQERPRSPPRPFI 189
            N    +++   +Q      QQN+Q+ Q+ +Q+ Q+ Q+       Q +Q+  + P +   
Sbjct: 978  NQQQQQQQNQQNQQNQQNQQQNQQQQQQQNQQQQQNQQTQQQQTQQQIQQNQQQPTQQIQ 1037

Query: 190  QRNQPGMNNDNPVFEQ 199
            Q+NQ  +  +    +Q
Sbjct: 1038 QQNQQQIQQNQQQLQQ 1053

HSP 2 Score: 43.1 bits (100), Expect = 4.8e-03
Identity = 36/150 (24.00%), Postives = 65/150 (43.33%), Query Frame = 1


Query: 35   QTSMVGLQQAVEKLKLEVRRLVNNPPRINQEAPTLNQENLDNRRQLQDIQQRLGNNQQVL 94
            Q      QQ  ++++   ++      + NQ+    NQ+ L  ++QLQ  QQ++   Q  L
Sbjct: 1012 QNQQTQQQQTQQQIQQNQQQPTQQIQQQNQQQIQQNQQQLQ-QQQLQQQQQQIQQQQIQL 1071

Query: 95   PRNQEKNQQVLPRNQEQHHNLLHNQEQFENLICTRERGNFHQDFHGCDQQNRQEYQRCDQ 154
             + Q + +Q+    Q+Q       Q+Q       +++    Q      QQ +Q+ Q+  Q
Sbjct: 1072 QQQQIQQKQLQQLQQQQQQQQQQQQQQ-------QQQQQQQQQQQQQQQQQQQQQQQQQQ 1131

Query: 155  RAQRLQEDPPHHLQGLQERP-RSPPRPFIQ 184
            + Q+LQ+      Q +Q +P + PP    Q
Sbjct: 1132 QQQQLQQTRNLQPQQIQTQPLQQPPNQMAQ 1153

HSP 3 Score: 41.2 bits (95), Expect = 1.8e-02
Identity = 44/206 (21.36%), Postives = 80/206 (38.83%), Query Frame = 1


Query: 42   QQAVEKLKLEVRRLVNNPPRINQEAPTLNQENLD--NRRQLQDIQ-QRLGNNQQVLPRNQ 101
            QQ  ++   + ++  N   + NQ+    NQ+     N++Q Q+ Q Q+    QQ+    Q
Sbjct: 971  QQQNQQQNQQQQQQQNQQNQQNQQNQQQNQQQQQQQNQQQQQNQQTQQQQTQQQIQQNQQ 1030

Query: 102  EKNQQVLPRNQEQHHNLLHNQEQFENLICTRERGNFHQ-------------DFHGCDQQN 161
            +  QQ+  +NQ+Q   +  NQ+Q +     +++    Q                   QQ 
Sbjct: 1031 QPTQQIQQQNQQQ---IQQNQQQLQQQQLQQQQQQIQQQQIQLQQQQIQQKQLQQLQQQQ 1090

Query: 162  RQEYQRCDQRAQRLQEDPPHHLQGLQERPRSPPRPFIQRNQPGMNNDNPVFEQHHPPHRP 221
            +Q+ Q+  Q+ Q+ Q+      Q  Q++ +   +   Q+      N  P   Q  P  +P
Sbjct: 1091 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQLQQTRNLQPQQIQTQPLQQP 1150

Query: 222  FLQKLVGLDPNSYDEKVNNHPFQYYQ 232
              Q    +         +  P Q YQ
Sbjct: 1151 PNQMAQSMISPQSTPSTSPSPQQQYQ 1173

[Close]

BLAST of ClCG01G002780 vs. Swiss-Prot
Match: CYAD_DICDI (Adenylate cyclase, terminal-differentiation specific OS=Dictyostelium discoideum GN=acrA PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.1e-06
Identity = 33/111 (29.73%), Postives = 58/111 (52.25%), Query Frame = 1


Query: 71   QENLDNRRQLQDIQQRLGNNQQVLPRNQEKNQQVLPRNQEQHHNLLHNQEQFENLICTRE 130
            Q+    ++Q Q  QQ+    QQ   + Q++ QQ   + Q+QHH+  H Q+QF+     + 
Sbjct: 2005 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHHHHHHQQQQFQQ----QS 2064

Query: 131  RGNFHQDFHGCDQQNRQEYQRCDQRAQRLQEDPPH-HLQGLQ-ERPRSPPR 180
            + +  Q      QQ +Q  Q+  Q++Q++Q+   H H Q +Q +R +S P+
Sbjct: 2065 QQSQQQSQQQQQQQQQQSQQQSQQQSQQIQKKSQHPHSQQIQSQRHQSQPQ 2111

HSP 2 Score: 40.0 bits (92), Expect = 4.1e-02
Identity = 32/158 (20.25%), Postives = 61/158 (38.61%), Query Frame = 1


Query: 42   QQAVEKLKLEVRRLVNNPPRINQEAPTLNQENLDNRRQLQDIQQRLGNNQQVLPRNQEKN 101
            QQ  ++ + + ++      +  Q+     Q+    ++Q Q+IQQ      Q + + Q++ 
Sbjct: 1863 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQSQNIQQPQSQQSQYVQQPQQQQ 1922

Query: 102  QQVLPRNQEQHHNLLHNQEQFENLICTRERGNFHQDFHGCDQQNRQEYQRCDQRAQRLQE 161
            QQ   + Q+Q       Q+Q                     QQ +Q+ Q+  Q+ Q+LQ+
Sbjct: 1923 QQQQQQQQQQQQQQQQQQQQ--------------------QQQQQQQQQQQPQQQQQLQQ 1982

Query: 162  DPPHHLQGLQERPRSPPRPFIQRNQPGMNNDNPVFEQH 200
               H     Q++ +  P+   Q  QP       +  Q+
Sbjct: 1983 QQQH-----QQQKQPSPQQQQQPQQPQQQQQQQIQNQY 1995

[Close]

BLAST of ClCG01G002780 vs. TrEMBL
Match: U6MA46_EIMMA (Uncharacterized protein OS=Eimeria maxima GN=EMWEY_00025840 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 7.3e-06
Identity = 39/154 (25.32%), Postives = 67/154 (43.51%), Query Frame = 1


Query: 59   PPRINQEAPTLNQENLDNRRQLQDIQQRLGNNQQVLPRNQEKNQQVLPRNQEQHHNLLHN 118
            P   NQ+     Q+  + ++QLQ  QQ+    QQ    + ++ QQ     QE+  N+ H 
Sbjct: 1249 PQHENQQ----QQQQQEQQQQLQQQQQQQQQQQQEQKEHNQQKQQEATEQQEKQENIQHQ 1308

Query: 119  QEQFENLICTRERGNFHQDFHGCDQQNRQEYQRCDQRAQRLQEDPPHHLQGLQERPRSPP 178
            ++Q EN    ++    HQ+     QQ ++E QR  Q   + ++   H  Q  Q+  +   
Sbjct: 1309 EQQQENQQQPQQEQQQHQEQQEQQQQQQEEQQREQQEEHQQEQQQEHQQQQQQDHQQQQQ 1368

Query: 179  RPFIQRNQP---GMNNDNPVFEQHHPPHRPFLQK 210
            +   Q+ QP            +QH P  +P L +
Sbjct: 1369 QQEQQQQQPPPQQQQQQQQENQQHQPQQQPQLHQ 1398

[Close]

BLAST of ClCG01G002780 vs. TrEMBL
Match: U6MA46_EIMMA (Uncharacterized protein OS=Eimeria maxima GN=EMWEY_00025840 PE=4 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 1.1e-01
Identity = 31/127 (24.41%), Postives = 53/127 (41.73%), Query Frame = 1


Query: 61   RINQEAPTLNQENLDNRRQLQDIQQRLGNNQQVLPRNQEKNQQVLPRNQEQHHNLLHNQE 120
            R+N  +   N   L  ++Q Q  QQ+    QQ  P+ Q+  QQ   + Q+Q       Q+
Sbjct: 1558 RLNISSSERNDIPLQQQQQQQQQQQQQQQQQQQQPQQQQPQQQQQQQQQQQQQQQQQQQQ 1617

Query: 121  QFENLICTRERGNFHQDFHGCDQQNRQEYQRCDQRAQRLQEDPPHHLQGLQERPRSPPRP 180
            Q +      E+    ++     QQ  Q+ ++  Q  Q+ Q+      Q  QE+ +   + 
Sbjct: 1618 QQQQQQQQEEQPQQQEEQQQQQQQQTQQQEQQQQHEQQQQQQQQQQQQQQQEQQQQEQQQ 1677

Query: 181  FIQRNQP 188
              Q  QP
Sbjct: 1678 QQQEQQP 1684

HSP 2 Score: 40.8 bits (94), Expect = 2.7e+00
Identity = 32/141 (22.70%), Postives = 59/141 (41.84%), Query Frame = 1


Query: 64   QEAPTLNQENLDNRRQLQDIQQRLGNNQQVLPRNQE-----KNQQVLPRNQEQHHNLLHN 123
            Q+     Q+    ++Q Q  QQ+    Q+  P+ QE     + QQ   + Q+Q H     
Sbjct: 1598 QQQQQQQQQQQQQQQQQQQQQQQQQQQQEEQPQQQEEQQQQQQQQTQQQEQQQQHEQQQQ 1657

Query: 124  QEQFENLICTRERGNFHQDFHGCDQQNRQEYQRCDQRAQRLQEDPPHHLQGLQERPRSPP 183
            Q+Q +     +E+    Q     +QQ +Q+ Q   Q+ ++ Q+      Q  QE+ +   
Sbjct: 1658 QQQQQQQQQQQEQQQQEQQQQQQEQQPQQQQQEQQQQQEQQQQQQQQQQQTEQEQ-QQQQ 1717

Query: 184  RPFIQRNQPGMNNDNPVFEQH 200
            +   ++ QP         +QH
Sbjct: 1718 QTQQEQQQPQQQQQQQEQQQH 1737

HSP 3 Score: 39.7 bits (91), Expect = 6.0e+00
Identity = 29/108 (26.85%), Postives = 48/108 (44.44%), Query Frame = 1


Query: 64   QEAPTLNQENLDNRRQLQDIQQRLGNNQQVLPRNQEKNQQVLPRNQEQHHNLLHNQEQFE 123
            QE     Q+    + Q Q+ QQ+   + Q   + QE+ QQ  P  Q+Q     + Q Q +
Sbjct: 1332 QEEQQREQQEEHQQEQQQEHQQQQQQDHQQQQQQQEQQQQQPPPQQQQQQQQENQQHQPQ 1391

Query: 124  NLICTRERGNFHQDFHGCDQQNRQEY-QRCDQRAQRLQEDPPHHLQGL 171
                  ++   HQ  H   QQ +Q++    + +A R Q+     LQG+
Sbjct: 1392 QQPQLHQQLQQHQQQHQQQQQQQQQHGYMGESKAGRPQQQQRLQLQGI 1439

HSP 4 Score: 32.3 bits (72), Expect = 9.5e+02
Identity = 35/134 (26.12%), Postives = 57/134 (42.54%), Query Frame = 1


Query: 42   QQAVEKLKLEVRRLVNNPPRINQEAPTLNQENLDNRRQLQDI--QQRLGNNQQVL--PRN 101
            QQ  ++ + + ++      R  QE     Q+    ++Q QD   QQ+    QQ    P+ 
Sbjct: 1318 QQQHQEQQEQQQQQQEEQQREQQEEHQQEQQQEHQQQQQQDHQQQQQQQEQQQQQPPPQQ 1377

Query: 102  QEKNQQVLPRNQEQHHNLLHNQEQFENLICTRERGNFHQDFHGCDQQNRQEY-QRCDQRA 161
            Q++ QQ   ++Q Q    LH Q Q             HQ  H   QQ +Q++    + +A
Sbjct: 1378 QQQQQQENQQHQPQQQPQLHQQLQ------------QHQQQHQQQQQQQQQHGYMGESKA 1437

Query: 162  QRLQEDPPHHLQGL 171
             R Q+     LQG+
Sbjct: 1438 GRPQQQQRLQLQGI 1439

[Close]

BLAST of ClCG01G002780 vs. NCBI nr
Match: gi|557182395|emb|CDI85230.1| (hypothetical protein EPH_0062260 [Eimeria praecox])

HSP 1 Score: 60.8 bits (146), Expect = 3.6e-06
Identity = 49/189 (25.93%), Postives = 85/189 (44.97%), Query Frame = 1


Query: 31  MIVMQTSMVGLQQAVEKLKLEVRRLVNNPPRINQEAPTLNQE-------NLDNRRQLQDI 90
           ++  Q  ++  QQ  + L  + + L+ +PP   Q+ P L Q+       +L +  Q Q +
Sbjct: 131 LLQQQQPLLLQQQQQQPLLQQQQPLLQHPPLQQQQLPLLQQQFLLQFMQHLQHLMQQQPL 190

Query: 91  QQRLGNNQQVLPRNQEKNQQVLPRNQEQHHNLLHNQEQFENLICTRERGNFHQDFHGCDQ 150
            Q+     Q     Q++ QQ  P  Q+Q   L H   Q + L   +++     +     Q
Sbjct: 191 LQQQHPPLQQQQPEQQQQQQQQPLLQQQQPLLQHPPLQQQQLPLLQQQFLLQFNQPSLQQ 250

Query: 151 QNRQEYQRCDQRAQRLQEDPPHHLQGL---QERPRSPPRPFIQRNQPGMNNDNPVFEQHH 210
           Q +Q+ Q   Q+ Q+ Q+ PP   Q L   Q+ P    +P +Q+ QP +    P+ +Q  
Sbjct: 251 QQQQQQQPPLQQQQQQQQQPPLQQQPLLQQQQPPLQQQQPLLQQQQPPLQQQRPLLQQQQ 310

[Close]

BLAST of ClCG01G002780 vs. NCBI nr
Match: gi|557182395|emb|CDI85230.1| (hypothetical protein EPH_0062260 [Eimeria praecox])

HSP 1 Score: 58.9 bits (141), Expect = 1.4e-05
Identity = 55/214 (25.70%), Postives = 94/214 (43.93%), Query Frame = 1


Query: 31  MIVMQTSMVGLQQAVEKLKLEVRRLVNNPPRINQEAPTLNQE-------NLDNRRQLQDI 90
           ++  Q  ++  QQ  + L  + + L+ +PP   Q+ P L Q+       +L +  Q Q +
Sbjct: 131 LLQQQQPLLLQQQQQQPLLQQQQPLLQHPPLQQQQLPLLQQQFLLQFMQHLQHLMQQQPL 190

Query: 91  QQRLGNNQQVLPRNQEKNQQVLPRNQEQHHNLLHNQEQFENLICTRERGNFHQDFHGCDQ 150
            Q+     Q     Q++ QQ  P  Q+Q   L H   Q + L   +++     +     Q
Sbjct: 191 LQQQHPPLQQQQPEQQQQQQQQPLLQQQQPLLQHPPLQQQQLPLLQQQFLLQFNQPSLQQ 250

Query: 151 QNRQEYQRCDQRAQRLQEDPPHHLQGLQERPRSPPRPFIQRNQPGMNNDNPVFEQHHPP- 210
           Q +Q+ Q   Q+ Q+ Q+ PP     LQ++P       +Q+ QP +    P+ +Q  PP 
Sbjct: 251 QQQQQQQPPLQQQQQQQQQPP-----LQQQP------LLQQQQPPLQQQQPLLQQQQPPL 310

Query: 211 --HRPFLQKLVGLDPNSYDEKVNNHPFQYYQKIQ 235
              RP LQ+   L      ++    PFQ  Q+ Q
Sbjct: 311 QQQRPLLQQQQPLLRQPLQQR---PPFQQQQQQQ 330

The following BLAST results are available for this feature:

BLAST of ClCG01G002780 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MED26_DICDI	5.5e-07	26.67	Putative mediator of RNA polymerase II transcription subunit 26 OS=Dictyostelium...	[more]
SPT20_DICDI	2.1e-06	27.21	Transcription factor SPT20 homolog OS=Dictyostelium discoideum GN=DDB_G0280065 P...	[more]
CYAD_DICDI	6.1e-06	29.73	Adenylate cyclase, terminal-differentiation specific OS=Dictyostelium discoideum...	[more]

BLAST of ClCG01G002780 vs. TrEMBL


Match Name	E-value	Identity	Description
U6MA46_EIMMA	7.3e-06	25.32	Uncharacterized protein OS=Eimeria maxima GN=EMWEY_00025840 PE=4 SV=1	[more]
U6MA46_EIMMA	1.1e-01	24.41	Uncharacterized protein OS=Eimeria maxima GN=EMWEY_00025840 PE=4 SV=1	[more]

BLAST of ClCG01G002780 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|557182395\|emb\|CDI85230.1\|	3.6e-06	25.93	hypothetical protein EPH_0062260 [Eimeria praecox]	[more]
gi\|557182395\|emb\|CDI85230.1\|	1.4e-05	25.70	hypothetical protein EPH_0062260 [Eimeria praecox]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG01G002780.1	ClCG01G002780.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 38..58 scor

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG01G002780	Watermelon (Charleston Gray)	wcgwcgB105
ClCG01G002780	Cucurbita moschata (Rifu)	cmowcgB247
ClCG01G002780	Cucumber (Gy14) v1	cgywcgB225
ClCG01G002780	Cucumber (Gy14) v1	cgywcgB520
ClCG01G002780	Cucurbita maxima (Rimu)	cmawcgB259
ClCG01G002780	Cucurbita maxima (Rimu)	cmawcgB316
ClCG01G002780	Cucurbita maxima (Rimu)	cmawcgB518
ClCG01G002780	Cucurbita moschata (Rifu)	cmowcgB311
ClCG01G002780	Cucurbita moschata (Rifu)	cmowcgB516
ClCG01G002780	Wild cucumber (PI 183967)	cpiwcgB379
ClCG01G002780	Wild cucumber (PI 183967)	cpiwcgB455
ClCG01G002780	Cucumber (Chinese Long) v2	cuwcgB364
ClCG01G002780	Cucumber (Chinese Long) v2	cuwcgB434
ClCG01G002780	Melon (DHL92) v3.5.1	mewcgB018
ClCG01G002780	Melon (DHL92) v3.5.1	mewcgB085
ClCG01G002780	Watermelon (97103) v1	wcgwmB142
ClCG01G002780	Cucurbita pepo (Zucchini)	cpewcgB165
ClCG01G002780	Cucurbita pepo (Zucchini)	cpewcgB639
ClCG01G002780	Bottle gourd (USVL1VR-Ls)	lsiwcgB010
ClCG01G002780	Bottle gourd (USVL1VR-Ls)	lsiwcgB008
ClCG01G002780	Cucumber (Gy14) v2	cgybwcgB332
ClCG01G002780	Cucumber (Gy14) v2	cgybwcgB400
ClCG01G002780	Melon (DHL92) v3.6.1	medwcgB016
ClCG01G002780	Melon (DHL92) v3.6.1	medwcgB084
ClCG01G002780	Silver-seed gourd	carwcgB0898
ClCG01G002780	Silver-seed gourd	carwcgB0912
ClCG01G002780	Cucumber (Chinese Long) v3	cucwcgB385
ClCG01G002780	Cucumber (Chinese Long) v3	cucwcgB456
ClCG01G002780	Watermelon (97103) v2	wcgwmbB089
ClCG01G002780	Watermelon (97103) v2	wcgwmbB114
ClCG01G002780	Wax gourd	wcgwgoB198