ClCG01G002380 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G002380
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
Descriptionmyb domain protein 103 LENGTH=370
LocationCG_Chr01 : 2357995 .. 2360794 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTCATCATTCTTGTTGCAATCAACAGAAGGTTAAGAGAGGGCTATGGTCACCGGAGGAAGACGAGAAGCTGATCCGCTACATAACCACCCACGGCTATGGCTGTTGGAGCGAAGTCCCCGAGAAAGCAGGTACGACGGCCGATAGGGCAGCGAAGCACTACAAGAATTTCAGAATTTTCTCAACGTAAAATTAAAAAATAATAATAATAAAGGGTTGCTAATTTCCTTGTTAGGGAGAGTTTCTGTTGACGCTAAAACGAATCTTGAGAAAGTTAGAATATACAATATTTTTGTGTAATTGAGTTGAATGTTGTGGATTAATTTTAGGGTTACAAAGATGTGGGAAGAGTTGTCGTTTAAGGTGGATAAATTATTTGAGACCAGACATTAGAAGAGGGAGATTTACACCTGAAGAGGAGAAGTTGATCATCAGCCTTCATGGGGTTGTCGGCAACAGGTTCCTTTAATTTTTCTTTTTTTAAATCTTAAGATTTGGATTTTATTAATTAATTGCATAAAAGAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCAACAAAACCCTAAGAAAGGGGAGTATTTAGGAAATGATAAATAATTTTAGTTATAGACATGAAAATAAAGGGGTGTGTGTTTTTCACCTACATTTAATTGGGTTGTAATTAAGGGCGTTAACATGGCAACTTCAGAGTTTGGAATGCCTGTAATTTTCACCTTAAACTTCATAATTATATTTCCATTTGTTATATATATATATTATCGTTTTGGTATTCATTTTATTCACAAATATGACCATTTTTATTTACTTTTGTTGTAAATTGGGTTTTTTTTTTTTTTTTTTTTTCATTGGAATGGTTTTGGTTCCATTTGTGATGAGGATGACTAATTTAAAATTGGTGAAAAAAAAAAATCTAATGGTATGTTATGTTAATGGGTGTTTATAACAATCATCGTGGTTCATATTTTGATTGAGAGTAAATGAATACATTGCATAAGGTTTAAGTATTAAACTTATAATAATTTTAAAAAAAAAAAAAAAAAACTAAACTTATGGTTGAAATCATTAAAAAAAAAATTCTTAAAAAAAATATTTTTGTGTTAAAATTTTAAAAGTTAAAAGGAGCTTGATTTATAACCATTGTTTAACTTATTTTAGAATATAAACTTTACTTGCCAACCATCATTATTGTTTTCCTGGGTGACTTTTTTTAAAATAACTAAAAGAAGTTGTATGAAATACAGTATATGTATCACATTATCCCTCCAATTCTTAGAAAGAGAACGTTCAATAATTTTCTTTTTTTGTTCAATATGTATAAGTGAGAATTTTAACCTTTGATTTATTGGTTAAGAATATGTTATCAAGTTAATTTTTGAAGATTAATTAATCATTTTACTAATTTTTTAGATTAATTACACCCTACAATTTTAGCTTCCATTTAGAAAAAGAAAATCAATACATCTAAATGTCATGTTTGTGTATTGTAGATGGGCTCACATAGCAAGTCATCTCCCCGGAAGAACAGACAATGAGATAAAAAACTACTGGAACTCATGGATCAAGAAAAAGATTCGAAAGCCAAACTCTACTACTCCAACCACTACCACTACCACCACAGTCACCTCCACCACCAACTCTGAGTACATTCAACCAAGTTCGAATCCGCACCAACTCAATTTCCTCACTCAAGACCTAACAACCAAACAACTCTCAATTTATCAAGAAACCCTATTTCCCGCCCTTCCTTGTCCTCTTTTCATGTTTGACACATCCTCCCAAGATCTATTCCATGACTCATTGAGTCTCAGTTCAGATACTACTTGGCACATGAACCACCACAACCACCCATTTCCCTCGGCGATGCTCGGCCCTCAAATGGGGTTGGCCACCGCAGGGACGACGGTAATTAACAACACGAATAATTATTTGCCTCCATTGATAGATAACATTGAAAGCTTGGTGACAATGGAAGATGAAGGAGAAATGGCATTGCAGTGCTTGCAAAGGCAAGAGCTGAGCGAGTGGGTGGTTGAGTCAACTCAGCCACAAAACTCTAATTTTCTATTTTGGGAAAATGTTGAAGGATCTCTTGGTGGGGAAGAAATTATTGCACCACCTTCTTCAAATGCTACCATAGGAGGAGGAGGAGCTAATTCATTATCATCTTCTAATTTCCCTACATCTCTATAA

mRNA sequence

ATGGGTCATCATTCTTGTTGCAATCAACAGAAGGTTAAGAGAGGGCTATGGTCACCGGAGGAAGACGAGAAGCTGATCCGCTACATAACCACCCACGGCTATGGCTGTTGGAGCGAAGTCCCCGAGAAAGCAGACCTAACAACCAAACAACTCTCAATTTATCAAGAAACCCTATTTCCCGCCCTTCCTTGTCCTCTTTTCATGTTTGACACATCCTCCCAAGATCTATTCCATGACTCATTGAGTCTCAGTTCAGATACTACTTGGCACATGAACCACCACAACCACCCATTTCCCTCGGCGATGCTCGGCCCTCAAATGGGGTTGGCCACCGCAGGGACGACGGTAATTAACAACACGAATAATTATTTGCCTCCATTGATAGATAACATTGAAAGCTTGGTGACAATGGAAGATGAAGGAGAAATGGCATTGCAGTGCTTGCAAAGGCAAGAGCTGAGCGAGTGGGTGGTTGAGTCAACTCAGCCACAAAACTCTAATTTTCTATTTTGGGAAAATGTTGAAGGATCTCTTGGTGGGGAAGAAATTATTGCACCACCTTCTTCAAATGCTACCATAGGAGGAGGAGGAGCTAATTCATTATCATCTTCTAATTTCCCTACATCTCTATAA

Coding sequence (CDS)

ATGGGTCATCATTCTTGTTGCAATCAACAGAAGGTTAAGAGAGGGCTATGGTCACCGGAGGAAGACGAGAAGCTGATCCGCTACATAACCACCCACGGCTATGGCTGTTGGAGCGAAGTCCCCGAGAAAGCAGACCTAACAACCAAACAACTCTCAATTTATCAAGAAACCCTATTTCCCGCCCTTCCTTGTCCTCTTTTCATGTTTGACACATCCTCCCAAGATCTATTCCATGACTCATTGAGTCTCAGTTCAGATACTACTTGGCACATGAACCACCACAACCACCCATTTCCCTCGGCGATGCTCGGCCCTCAAATGGGGTTGGCCACCGCAGGGACGACGGTAATTAACAACACGAATAATTATTTGCCTCCATTGATAGATAACATTGAAAGCTTGGTGACAATGGAAGATGAAGGAGAAATGGCATTGCAGTGCTTGCAAAGGCAAGAGCTGAGCGAGTGGGTGGTTGAGTCAACTCAGCCACAAAACTCTAATTTTCTATTTTGGGAAAATGTTGAAGGATCTCTTGGTGGGGAAGAAATTATTGCACCACCTTCTTCAAATGCTACCATAGGAGGAGGAGGAGCTAATTCATTATCATCTTCTAATTTCCCTACATCTCTATAA

Protein sequence

MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADLTTKQLSIYQETLFPALPCPLFMFDTSSQDLFHDSLSLSSDTTWHMNHHNHPFPSAMLGPQMGLATAGTTVINNTNNYLPPLIDNIESLVTMEDEGEMALQCLQRQELSEWVVESTQPQNSNFLFWENVEGSLGGEEIIAPPSSNATIGGGGANSLSSSNFPTSL
Homology
[Close]
BLAST of ClCG01G002380 vs. Swiss-Prot
Match: MYB26_ARATH (Transcription factor MYB26 OS=Arabidopsis thaliana GN=MYB26 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.6e-16
Identity = 36/48 (75.00%), Postives = 39/48 (81.25%), Query Frame = 1 

Query: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADLTT 49
          MGHHSCCN+QKVKRGLWSPEEDEKLI YI ++G+GCWS VP+ A   T
Sbjct: 1  MGHHSCCNKQKVKRGLWSPEEDEKLINYINSYGHGCWSSVPKHAGTYT 48

[Close]
BLAST of ClCG01G002380 vs. Swiss-Prot
Match: MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.2e-14
Identity = 32/46 (69.57%), Postives = 37/46 (80.43%), Query Frame = 1 

Query: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADL 47
          MG HSCC +QK+++GLWSPEEDEKL+ YIT HG+GCWS VP+ A L
Sbjct: 1  MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGL 46

[Close]
BLAST of ClCG01G002380 vs. Swiss-Prot
Match: MYB35_ARATH (Transcription factor MYB35 OS=Arabidopsis thaliana GN=MYB35 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.5e-08
Identity = 32/86 (37.21%), Postives = 41/86 (47.67%), Query Frame = 1 

Query: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADLTTKQLSIYQETLFP 60
          MG   CC++  VK+GLW+ EED K++ Y+  HG G WS +P+KA L     S        
Sbjct: 1  MGRPPCCDKSNVKKGLWTEEEDAKILAYVAIHGVGNWSLIPKKAGLNRCGKS-------- 60

Query: 61 ALPCPLFMFDTSSQDLFHDSLSLSSD 87
             C L   +    DL HDS S   +
Sbjct: 61 ---CRLRWTNYLRPDLKHDSFSTQEE 75

[Close]
BLAST of ClCG01G002380 vs. Swiss-Prot
Match: MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3)

HSP 1 Score: 58.5 bits (140), Expect = 9.9e-08
Identity = 25/38 (65.79%), Postives = 26/38 (68.42%), Query Frame = 1 

Query: 9  QQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADL 47
          Q KV++GLWSPEEDEKL  +I  HG GCWS VP  A L
Sbjct: 11 QPKVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAAL 48

[Close]
BLAST of ClCG01G002380 vs. Swiss-Prot
Match: MYB34_ARATH (Transcription factor MYB34 OS=Arabidopsis thaliana GN=MYB34 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-07
Identity = 22/41 (53.66%), Postives = 28/41 (68.29%), Query Frame = 1 

Query: 6  CCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADL 47
          CC ++ +K+G W+PEED+KLI Y+  HG G W  +PEKA L
Sbjct: 6  CCKEEGIKKGAWTPEEDQKLIAYLHLHGEGGWRTLPEKAGL 46

[Close]
BLAST of ClCG01G002380 vs. TrEMBL
Match: A0A0A0KMI2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152790 PE=4 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 2.4e-77
Identity = 150/169 (88.76%), Postives = 160/169 (94.67%), Query Frame = 1 

Query: 45  DLTTKQLSIYQETLFPALPCPLFMFDTSSQDLFHD-SLSLSSDTTWHMNHHNHPFPSAML 104
           DLTTKQLS++QETLFPAL CPLFMFDTSSQ+LFHD SLSL+SDTTWHMNHHNHPFP+A+L
Sbjct: 156 DLTTKQLSLHQETLFPALSCPLFMFDTSSQELFHDYSLSLNSDTTWHMNHHNHPFPTAVL 215

Query: 105 GPQMGLATAGTTVINNTNNYLPPLIDNIESLVTMEDEGEMALQCLQRQELSEWVVES-TQ 164
            PQMGL  A TTV+NNTNNYLPPLI+NIESLVTMEDEGEMALQCLQRQEL+EWVVES TQ
Sbjct: 216 SPQMGLTAATTTVMNNTNNYLPPLIENIESLVTMEDEGEMALQCLQRQELNEWVVESTTQ 275

Query: 165 PQNSNFLFWENVEGSLGGEEIIAPPSSNATI-GGGGANSLSSSNFPTSL 211
           PQNSNFLFWENVEGSLGGEEIIA PSSNATI GGGGAN+LSSSNFPTSL
Sbjct: 276 PQNSNFLFWENVEGSLGGEEIIA-PSSNATIGGGGGANTLSSSNFPTSL 323

[Close]
BLAST of ClCG01G002380 vs. TrEMBL
Match: A0A0A0KMI2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152790 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 1 

Query: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADL 47
          MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKA L
Sbjct: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGL 46


HSP 2 Score: 135.6 bits (340), Expect = 7.1e-29
Identity = 88/173 (50.87%), Postives = 113/173 (65.32%), Query Frame = 1 

Query: 55  QETLFPALPCPLFMFDTSSQD-------LFHDSLSLSSDTTWHMNHHN-HPFPSAMLGPQ 114
           QETLF +  CPLFMFDTSS D       LF DSL LS +T W+++HH  H  P     PQ
Sbjct: 161 QETLFSST-CPLFMFDTSSLDTGNVRAELFQDSLGLSGET-WNLSHHQVHALP-----PQ 220

Query: 115 MGLATAGTTV-INNTNNYLPPLIDNIESLV--------TMEDEGEMALQCLQRQELSEWV 174
              AT+ T   + +T NYLPPLI+N+E++V        ++E+EGEMAL+CL+RQEL+EWV
Sbjct: 221 PAEATSFTAATVIDTTNYLPPLIENVENMVGGMEVQSCSIEEEGEMALECLRRQELNEWV 280

Query: 175 VESTQPQNSNFLFWENVEGSLGGEEIIAPPSSNATIGGGGANSLSSSNFPTSL 211
               + Q  +FLFWENVEG LGGEE +AP +SN      G+N+LS   FP+SL
Sbjct: 281 --ENEQQCPSFLFWENVEGQLGGEE-LAPNTSNI-----GSNTLSP--FPSSL 316

[Close]
BLAST of ClCG01G002380 vs. TrEMBL
Match: V7CMD4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G159700g PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 1 

Query: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADL 47
          MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKA L
Sbjct: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGL 46


HSP 2 Score: 129.0 bits (323), Expect = 6.6e-27
Identity = 87/182 (47.80%), Postives = 110/182 (60.44%), Query Frame = 1 

Query: 55  QETLFPALPCPLFMFDTSSQD---------------LFHDSLSLSSDTTWHMNHHN-HPF 114
           QETLF +  CPLFMFDTSS D               LF DSL LSS  TW+M+HH  H  
Sbjct: 161 QETLFSST-CPLFMFDTSSLDQGTTTVDTTNNVRAELFQDSLGLSSSETWNMSHHQVHAL 220

Query: 115 PSAMLGPQMGLATAGTTVINNTNNYLPPLIDNIESLV--------TMEDEGEMALQCLQR 174
           P     PQ+      T VI+ TN YLPPLI+N+E++V        ++++EGEMAL+CL+R
Sbjct: 221 P-----PQLAATFTATNVIDTTN-YLPPLIENVENMVPNMEVQSCSIDEEGEMALECLRR 280

Query: 175 QELSEWVVESTQPQNSNFLFWE--NVEGSLGGEEIIAPPSSNATIGGGGANSLSSSNFPT 211
           Q+L+EWV    Q Q  +FLFW+  NVEG L GEE +AP +SN      G N+LS   FP+
Sbjct: 281 QDLNEWV--ENQQQCPSFLFWDNINVEGQLRGEE-LAPNTSNM-----GNNTLSP--FPS 325

[Close]
BLAST of ClCG01G002380 vs. TrEMBL
Match: A0A0B2RKC5_GLYSO (Transcription factor MYB86 OS=Glycine soja GN=glysoja_004807 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 1 

Query: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADL 47
          MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKA L
Sbjct: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGL 46


HSP 2 Score: 129.0 bits (323), Expect = 6.6e-27
Identity = 87/182 (47.80%), Postives = 110/182 (60.44%), Query Frame = 1 

Query: 55  QETLFPALPCPLFMFDTSSQD---------------LFHDSLSLSSDTTWHMNHHN-HPF 114
           QETLF +  CPLFMFDTSS D               LF DSL LSS  TW+M+HH  H  
Sbjct: 161 QETLFSST-CPLFMFDTSSLDQGTTTVDTTNNVRAELFQDSLGLSSSETWNMSHHQVHAL 220

Query: 115 PSAMLGPQMGLATAGTTVINNTNNYLPPLIDNIESLV--------TMEDEGEMALQCLQR 174
           P     PQ+      T VI+ TN YLPPLI+N+E++V        ++++EGEMAL+CL+R
Sbjct: 221 P-----PQLAATFTATNVIDTTN-YLPPLIENVENMVPNMEVQSCSIDEEGEMALECLRR 280

Query: 175 QELSEWVVESTQPQNSNFLFWE--NVEGSLGGEEIIAPPSSNATIGGGGANSLSSSNFPT 211
           Q+L+EWV    Q Q  +FLFW+  NVEG L GEE +AP +SN      G N+LS   FP+
Sbjct: 281 QDLNEWV--ENQQQCPSFLFWDNINVEGQLRGEE-LAPNTSNM-----GNNTLSP--FPS 325

[Close]
BLAST of ClCG01G002380 vs. TrEMBL
Match: I1LGD5_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G021600 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 1 

Query: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADL 47
          MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKA L
Sbjct: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGL 46


HSP 2 Score: 128.6 bits (322), Expect = 8.7e-27
Identity = 85/190 (44.74%), Postives = 115/190 (60.53%), Query Frame = 1 

Query: 45  DLTTKQLSIYQETLFPALPCPLFMFDTSSQD--------------LFHDSLSLSSDTTWH 104
           ++TTK     QET+F +  CPLFMFDTSS D              LF DSL LSS+T W+
Sbjct: 152 NVTTKPA--VQETIFSST-CPLFMFDTSSLDHGTTTVDTTNVRAELFQDSLGLSSET-WN 211

Query: 105 MNHH--NHPFPSAMLGPQMGLATAGTTVINNTNNYLPPLIDNIESLV--------TMEDE 164
           ++HH  +H  P     P    AT     + ++ NYLPPLI+N+E++V        ++++E
Sbjct: 212 LSHHQVHHALPPQ---PAQAAATFTAATVMDSTNYLPPLIENVENMVPNMEVQGCSIDEE 271

Query: 165 GEMALQCLQRQELSEWVVESTQPQNSNFLFWENVEGSLGGEEIIAPPSSNATIGGGGANS 211
           GEMAL+CL+RQEL+EWV    Q    +FLFW++VEG LGGEE +AP +SN      G N+
Sbjct: 272 GEMALECLRRQELNEWV--ENQQHCPSFLFWDSVEGQLGGEE-LAPNTSNI-----GTNT 324

[Close]
BLAST of ClCG01G002380 vs. TAIR10
Match: AT1G63910.1 (AT1G63910.1 myb domain protein 103)

HSP 1 Score: 104.8 bits (260), Expect = 6.8e-23
Identity = 45/46 (97.83%), Postives = 43/46 (93.48%), Query Frame = 1 

Query: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADL 47
          MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKA L
Sbjct: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGL 46

[Close]
BLAST of ClCG01G002380 vs. TAIR10
Match: AT3G13890.1 (AT3G13890.1 myb domain protein 26)

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-17
Identity = 36/48 (75.00%), Postives = 39/48 (81.25%), Query Frame = 1 

Query: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADLTT 49
          MGHHSCCN+QKVKRGLWSPEEDEKLI YI ++G+GCWS VP+ A   T
Sbjct: 1  MGHHSCCNKQKVKRGLWSPEEDEKLINYINSYGHGCWSSVPKHAGTYT 48

[Close]
BLAST of ClCG01G002380 vs. TAIR10
Match: AT4G01680.2 (AT4G01680.2 myb domain protein 55)

HSP 1 Score: 80.1 bits (196), Expect = 1.8e-15
Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 1 

Query: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKA 45
          MG HSCC +QK+++GLWSPEEDEKL+RYIT +G+GCWS VP++A
Sbjct: 1  MGRHSCCYKQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQA 44

[Close]
BLAST of ClCG01G002380 vs. TAIR10
Match: AT5G26660.1 (AT5G26660.1 myb domain protein 86)

HSP 1 Score: 80.1 bits (196), Expect = 1.8e-15
Identity = 32/46 (69.57%), Postives = 37/46 (80.43%), Query Frame = 1 

Query: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADL 47
          MG HSCC +QK+++GLWSPEEDEKL+ YIT HG+GCWS VP+ A L
Sbjct: 1  MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGL 46

[Close]
BLAST of ClCG01G002380 vs. TAIR10
Match: AT1G09540.1 (AT1G09540.1 myb domain protein 61)

HSP 1 Score: 78.6 bits (192), Expect = 5.2e-15
Identity = 31/46 (67.39%), Postives = 37/46 (80.43%), Query Frame = 1 

Query: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADL 47
          MG HSCC +QK+++GLWSPEEDEKL+ +IT HG+GCWS VP+ A L
Sbjct: 1  MGRHSCCYKQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGL 46

[Close]
BLAST of ClCG01G002380 vs. NCBI nr
Match: gi|778699509|ref|XP_011654724.1| (PREDICTED: transcription factor MYB86 [Cucumis sativus])

HSP 1 Score: 296.6 bits (758), Expect = 3.5e-77
Identity = 150/169 (88.76%), Postives = 160/169 (94.67%), Query Frame = 1 

Query: 45  DLTTKQLSIYQETLFPALPCPLFMFDTSSQDLFHD-SLSLSSDTTWHMNHHNHPFPSAML 104
           DLTTKQLS++QETLFPAL CPLFMFDTSSQ+LFHD SLSL+SDTTWHMNHHNHPFP+A+L
Sbjct: 156 DLTTKQLSLHQETLFPALSCPLFMFDTSSQELFHDYSLSLNSDTTWHMNHHNHPFPTAVL 215

Query: 105 GPQMGLATAGTTVINNTNNYLPPLIDNIESLVTMEDEGEMALQCLQRQELSEWVVES-TQ 164
            PQMGL  A TTV+NNTNNYLPPLI+NIESLVTMEDEGEMALQCLQRQEL+EWVVES TQ
Sbjct: 216 SPQMGLTAATTTVMNNTNNYLPPLIENIESLVTMEDEGEMALQCLQRQELNEWVVESTTQ 275

Query: 165 PQNSNFLFWENVEGSLGGEEIIAPPSSNATI-GGGGANSLSSSNFPTSL 211
           PQNSNFLFWENVEGSLGGEEIIA PSSNATI GGGGAN+LSSSNFPTSL
Sbjct: 276 PQNSNFLFWENVEGSLGGEEIIA-PSSNATIGGGGGANTLSSSNFPTSL 323

[Close]
BLAST of ClCG01G002380 vs. NCBI nr
Match: gi|778699509|ref|XP_011654724.1| (PREDICTED: transcription factor MYB86 [Cucumis sativus])

HSP 1 Score: 104.8 bits (260), Expect = 1.9e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 1 

Query: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADL 47
          MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKA L
Sbjct: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGL 46


HSP 2 Score: 135.6 bits (340), Expect = 1.0e-28
Identity = 88/173 (50.87%), Postives = 113/173 (65.32%), Query Frame = 1 

Query: 55  QETLFPALPCPLFMFDTSSQD-------LFHDSLSLSSDTTWHMNHHN-HPFPSAMLGPQ 114
           QETLF +  CPLFMFDTSS D       LF DSL LS +T W+++HH  H  P     PQ
Sbjct: 161 QETLFSST-CPLFMFDTSSLDTGNVRAELFQDSLGLSGET-WNLSHHQVHALP-----PQ 220

Query: 115 MGLATAGTTV-INNTNNYLPPLIDNIESLV--------TMEDEGEMALQCLQRQELSEWV 174
              AT+ T   + +T NYLPPLI+N+E++V        ++E+EGEMAL+CL+RQEL+EWV
Sbjct: 221 PAEATSFTAATVIDTTNYLPPLIENVENMVGGMEVQSCSIEEEGEMALECLRRQELNEWV 280

Query: 175 VESTQPQNSNFLFWENVEGSLGGEEIIAPPSSNATIGGGGANSLSSSNFPTSL 211
               + Q  +FLFWENVEG LGGEE +AP +SN      G+N+LS   FP+SL
Sbjct: 281 --ENEQQCPSFLFWENVEGQLGGEE-LAPNTSNI-----GSNTLSP--FPSSL 316

[Close]
BLAST of ClCG01G002380 vs. NCBI nr
Match: gi|593790980|ref|XP_007158529.1| (hypothetical protein PHAVU_002G159700g [Phaseolus vulgaris])

HSP 1 Score: 104.8 bits (260), Expect = 1.9e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 1 

Query: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADL 47
          MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKA L
Sbjct: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGL 46


HSP 2 Score: 129.0 bits (323), Expect = 9.5e-27
Identity = 87/182 (47.80%), Postives = 110/182 (60.44%), Query Frame = 1 

Query: 55  QETLFPALPCPLFMFDTSSQD---------------LFHDSLSLSSDTTWHMNHHN-HPF 114
           QETLF +  CPLFMFDTSS D               LF DSL LSS  TW+M+HH  H  
Sbjct: 161 QETLFSST-CPLFMFDTSSLDQGTTTVDTTNNVRAELFQDSLGLSSSETWNMSHHQVHAL 220

Query: 115 PSAMLGPQMGLATAGTTVINNTNNYLPPLIDNIESLV--------TMEDEGEMALQCLQR 174
           P     PQ+      T VI+ TN YLPPLI+N+E++V        ++++EGEMAL+CL+R
Sbjct: 221 P-----PQLAATFTATNVIDTTN-YLPPLIENVENMVPNMEVQSCSIDEEGEMALECLRR 280

Query: 175 QELSEWVVESTQPQNSNFLFWE--NVEGSLGGEEIIAPPSSNATIGGGGANSLSSSNFPT 211
           Q+L+EWV    Q Q  +FLFW+  NVEG L GEE +AP +SN      G N+LS   FP+
Sbjct: 281 QDLNEWV--ENQQQCPSFLFWDNINVEGQLRGEE-LAPNTSNM-----GNNTLSP--FPS 325

[Close]
BLAST of ClCG01G002380 vs. NCBI nr
Match: gi|734408934|gb|KHN35041.1| (Transcription factor MYB86 [Glycine soja])

HSP 1 Score: 104.8 bits (260), Expect = 1.9e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 1 

Query: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADL 47
          MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKA L
Sbjct: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGL 46


HSP 2 Score: 128.6 bits (322), Expect = 1.2e-26
Identity = 85/190 (44.74%), Postives = 115/190 (60.53%), Query Frame = 1 

Query: 45  DLTTKQLSIYQETLFPALPCPLFMFDTSSQD--------------LFHDSLSLSSDTTWH 104
           ++TTK     QET+F +  CPLFMFDTSS D              LF DSL LSS+T W+
Sbjct: 152 NVTTKPA--VQETIFSST-CPLFMFDTSSLDHGTTTVDTTNVRAELFQDSLGLSSET-WN 211

Query: 105 MNHH--NHPFPSAMLGPQMGLATAGTTVINNTNNYLPPLIDNIESLV--------TMEDE 164
           ++HH  +H  P     P    AT     + ++ NYLPPLI+N+E++V        ++++E
Sbjct: 212 LSHHQVHHALPPQ---PAQAAATFTAATVMDSTNYLPPLIENVENMVPNMEVQGCSIDEE 271

Query: 165 GEMALQCLQRQELSEWVVESTQPQNSNFLFWENVEGSLGGEEIIAPPSSNATIGGGGANS 211
           GEMAL+CL+RQEL+EWV    Q    +FLFW++VEG LGGEE +AP +SN      G N+
Sbjct: 272 GEMALECLRRQELNEWV--ENQQHCPSFLFWDSVEGQLGGEE-LAPNTSNI-----GTNT 324

[Close]
BLAST of ClCG01G002380 vs. NCBI nr
Match: gi|920680227|gb|KOM27101.1| (hypothetical protein LR48_Vigan401s001100 [Vigna angularis])

HSP 1 Score: 104.8 bits (260), Expect = 1.9e-19
Identity = 45/46 (97.83%), Postives = 45/46 (97.83%), Query Frame = 1 

Query: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKADL 47
          MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKA L
Sbjct: 1  MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGL 46


HSP 2 Score: 128.6 bits (322), Expect = 1.2e-26
Identity = 87/182 (47.80%), Postives = 110/182 (60.44%), Query Frame = 1 

Query: 55  QETLFPALPCPLFMFDTSSQD---------------LFHDSLSLSSDTTWHMNHHN-HPF 114
           QETLF +  CPLFMFDTSS D               LF DSL LSS  TW+++HH  H  
Sbjct: 162 QETLFSST-CPLFMFDTSSLDQGTTTVDTTTNVRTELFQDSLGLSSTETWNLSHHQVHVL 221

Query: 115 PSAMLGPQMGLATAGTTVINNTNNYLPPLIDNIESLV--------TMEDEGEMALQCLQR 174
           P     PQ+       TVI+ TN YLPPLI+N++++V        ++++EGEMAL+CL+R
Sbjct: 222 P-----PQLAATFTAATVIDTTN-YLPPLIENVDNMVPNMEVQSCSIDEEGEMALECLRR 281

Query: 175 QELSEWVVESTQPQNSNFLFWE--NVEGSLGGEEIIAPPSSNATIGGGGANSLSSSNFPT 211
           Q L+EWV    Q Q  NFLFW+  NVEG LGGEE +AP +SN      G N+LS   FP+
Sbjct: 282 QGLNEWV--EHQQQCPNFLFWDSINVEGQLGGEE-LAPNTSNM-----GNNTLSP--FPS 326

The following BLAST results are available for this feature:
BLAST of ClCG01G002380 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB26_ARATH2.6e-1675.00Transcription factor MYB26 OS=Arabidopsis thaliana GN=MYB26 PE=2 SV=1[more]
MYB86_ARATH3.2e-1469.57Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1[more]
MYB35_ARATH1.5e-0837.21Transcription factor MYB35 OS=Arabidopsis thaliana GN=MYB35 PE=2 SV=1[more]
MYB3_HORVU9.9e-0865.79Myb-related protein Hv33 OS=Hordeum vulgare GN=MYB2 PE=2 SV=3[more]
MYB34_ARATH1.3e-0753.66Transcription factor MYB34 OS=Arabidopsis thaliana GN=MYB34 PE=1 SV=1[more]
BLAST of ClCG01G002380 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMI2_CUCSA2.4e-7788.76Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152790 PE=4 SV=1[more]
A0A0A0KMI2_CUCSA1.3e-1997.83Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152790 PE=4 SV=1[more]
V7CMD4_PHAVU1.3e-1997.83Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G159700g PE=4 SV=1[more]
A0A0B2RKC5_GLYSO1.3e-1997.83Transcription factor MYB86 OS=Glycine soja GN=glysoja_004807 PE=4 SV=1[more]
I1LGD5_SOYBN1.3e-1997.83Uncharacterized protein OS=Glycine max GN=GLYMA_11G021600 PE=4 SV=1[more]
BLAST of ClCG01G002380 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G63910.16.8e-2397.83 myb domain protein 103[more]
AT3G13890.11.5e-1775.00 myb domain protein 26[more]
AT4G01680.21.8e-1570.45 myb domain protein 55[more]
AT5G26660.11.8e-1569.57 myb domain protein 86[more]
AT1G09540.15.2e-1567.39 myb domain protein 61[more]
BLAST of ClCG01G002380 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778699509|ref|XP_011654724.1|3.5e-7788.76PREDICTED: transcription factor MYB86 [Cucumis sativus][more]
gi|778699509|ref|XP_011654724.1|1.9e-1997.83PREDICTED: transcription factor MYB86 [Cucumis sativus][more]
gi|593790980|ref|XP_007158529.1|1.9e-1997.83hypothetical protein PHAVU_002G159700g [Phaseolus vulgaris][more]
gi|734408934|gb|KHN35041.1|1.9e-1997.83Transcription factor MYB86 [Glycine soja][more]
gi|920680227|gb|KOM27101.1|1.9e-1997.83hypothetical protein LR48_Vigan401s001100 [Vigna angularis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0019438 aromatic compound biosynthetic process
biological_process GO:1901362 organic cyclic compound biosynthetic process
biological_process GO:0031326 regulation of cellular biosynthetic process
biological_process GO:0031328 positive regulation of cellular biosynthetic process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0000785 chromatin
molecular_function GO:0003677 DNA binding
molecular_function GO:0003682 chromatin binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G002380.1ClCG01G002380.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 14..49
score: 1.
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 6..44
score: 3.0
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 10..49
score: 1.3
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 9..62
score: 10
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 1..190
score: 8.8
NoneNo IPR availablePANTHERPTHR10641:SF667SUBFAMILY NOT NAMEDcoord: 1..190
score: 8.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
ClCG01G002380Csa5G152790Cucumber (Chinese Long) v2cuwcgB364
ClCG01G002380MELO3C005707Melon (DHL92) v3.5.1mewcgB018
ClCG01G002380Cla011417Watermelon (97103) v1wcgwmB142
ClCG01G002380Cla97C01G002430Watermelon (97103) v2wcgwmbB089
ClCG01G002380Bhi12G000283Wax gourdwcgwgoB198
ClCG01G002380CSPI05G05080Wild cucumber (PI 183967)cpiwcgB379
ClCG01G002380Cucsa.303440Cucumber (Gy14) v1cgywcgB520
ClCG01G002380CmaCh02G014270Cucurbita maxima (Rimu)cmawcgB518
ClCG01G002380CmoCh02G014610Cucurbita moschata (Rifu)cmowcgB516
ClCG01G002380Lsi09G002240Bottle gourd (USVL1VR-Ls)lsiwcgB008
ClCG01G002380Cp4.1LG05g03170Cucurbita pepo (Zucchini)cpewcgB639
ClCG01G002380CsGy5G002380Cucumber (Gy14) v2cgybwcgB332
ClCG01G002380MELO3C005707.2Melon (DHL92) v3.6.1medwcgB016
ClCG01G002380Carg02552Silver-seed gourdcarwcgB0898
ClCG01G002380CsaV3_5G002490Cucumber (Chinese Long) v3cucwcgB385
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
ClCG01G002380Watermelon (Charleston Gray)wcgwcgB098
ClCG01G002380Watermelon (Charleston Gray)wcgwcgB105
ClCG01G002380Cucurbita moschata (Rifu)cmowcgB247
ClCG01G002380Cucumber (Gy14) v1cgywcgB147
ClCG01G002380Cucumber (Gy14) v1cgywcgB225
ClCG01G002380Cucurbita maxima (Rimu)cmawcgB259
ClCG01G002380Cucurbita maxima (Rimu)cmawcgB290
ClCG01G002380Cucurbita maxima (Rimu)cmawcgB316
ClCG01G002380Cucurbita maxima (Rimu)cmawcgB635
ClCG01G002380Cucurbita moschata (Rifu)cmowcgB284
ClCG01G002380Cucurbita moschata (Rifu)cmowcgB311
ClCG01G002380Cucurbita moschata (Rifu)cmowcgB637
ClCG01G002380Wild cucumber (PI 183967)cpiwcgB299
ClCG01G002380Wild cucumber (PI 183967)cpiwcgB455
ClCG01G002380Cucumber (Chinese Long) v2cuwcgB206
ClCG01G002380Cucumber (Chinese Long) v2cuwcgB289
ClCG01G002380Cucumber (Chinese Long) v2cuwcgB434
ClCG01G002380Melon (DHL92) v3.5.1mewcgB085
ClCG01G002380Melon (DHL92) v3.5.1mewcgB421
ClCG01G002380Melon (DHL92) v3.5.1mewcgB467
ClCG01G002380Watermelon (97103) v1wcgwmB133
ClCG01G002380Cucurbita pepo (Zucchini)cpewcgB165
ClCG01G002380Bottle gourd (USVL1VR-Ls)lsiwcgB010
ClCG01G002380Bottle gourd (USVL1VR-Ls)lsiwcgB326
ClCG01G002380Cucumber (Gy14) v2cgybwcgB267
ClCG01G002380Cucumber (Gy14) v2cgybwcgB400
ClCG01G002380Melon (DHL92) v3.6.1medwcgB084
ClCG01G002380Melon (DHL92) v3.6.1medwcgB461
ClCG01G002380Silver-seed gourdcarwcgB0575
ClCG01G002380Silver-seed gourdcarwcgB0912
ClCG01G002380Cucumber (Chinese Long) v3cucwcgB299
ClCG01G002380Cucumber (Chinese Long) v3cucwcgB456
ClCG01G002380Watermelon (97103) v2wcgwmbB107
ClCG01G002380Watermelon (97103) v2wcgwmbB114