ClCG01G002320 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTAGGTTTGGGAGTGCTTCGATCAAACTCTTCTCTTCCACAACCTCAGGAGACACACACAAAGTCGGCCGTGGATCTTCTTCACCGACAACCAACTAGAAGCCATGGCTGCTCCCGAAGCTCCTGTCTGTTACGTCGGCGTCGCTAGACAATCCGCAGCTTTTCGTCTCATGAAGCAGATGGTACTTCTTCCTTTTCCTTCCTTTCCTTTCCACCAATCTTTTCACATGGATTCTTCGTCATACTACGACCTTGAATTAATTGTGTTTTGAATTTCTGGCCGTTTAGGGATGGGAAGAAGGAGAAGGGCTTGGCAAGGACAAGCAAGGGATCAAAGGCCATGTTAGAATTAAAAATAAACAAGATACTGCCGGTTTGTCCCCTCCTCCTTAATTTGTTTCATTAATTCAATTTTTTTTAGTTGTTCTACTTGATCAAATGGTAGATTTTGAACATTTGTATGTCTAATTTTGCGGTAAGGAATTTAAATTTCTGTTAGATTTTTGGATTTAGTGCATTATTAGTGAACAATCAATCAGCTAAAATGGTTTGATAATAATCTTTTTTTTTCAAGAAATAAAGTTGCATTCTAGTTGTTTCATTGTTTTGTTTTCTTCGTTTAGAAAACATTTTGAACTGAAATAGTAGTTTGGTTCTTTTGGGTAACAAGTTTGTTATTTGGAAATGGCGAGTTGATAAGAAAAGGGTTATCGAATGGCTCTAACGGTTTTGTATTACATGATCAAGCTTTGACAGCCTGCTTTTGAATTATCAACTGATCAGATTAATTTTTCCATATCAAAACTAACACTAGAATTTAAGTTAGATCATCCAAGGTACTACCGTAGTTTGCGTCTGAGCCGAGTCACTCATGTGGGGTCTTTGAGTAACACCTACCTTCGGTGAGCTTAATAAGGAAAACCCTAGATGTCTTTGTAGTCTAGACCTTGGGGGACCGGCACAGACTTTTAAAGAAAAAAAATGAAAGGGTTTCACAGGGGCCGGGCGTAGATGTTTTATGAATGCGTTTTAGGTTTGTTTTGACTTGTTCTTTTCCCCTAGGAATTGGCACTGAGAAGCAGAACAATTGGGCTTTTGATACCACACAATTTGACAACATCTTGAAGAGACTGAAAGTGGTATTTCCCTCTCTCCATTCTATAATTCATCTTACCATGTATTAATTTTGTGTATATTTTGAGAGTAGCTTAAAGTTTTCCCTTTTTTTATGGCAGCAAGCAGTAAAAAACAGTGAGGAAGGTAATACCTTTGGCATTTAGCTTCAGTATTTCAAGAGTTTGCATTTCCTGATATTTATGGTTTGATGATTTCATCTGCAGAGAAAGATGACACTTCGGTGGAAACTGTGGATGATGCAACTAATGATCAGGATCTGGTGACTAAGGCAACACGACCACAAGGAAGGTTGGTCCCGTTGTATTTGGCTCACTTATGAGTTGTATAACATGGTTTTTCTTTTTCTGTTCTCCCCTGATCATTTAATTACATGGAGATGCATGTTTTTCATTTTTGCCAGATACAAGAGAAGAGAGAGAGGAAAGCTTGTCAATGCATATTCTTCTAAGGATCTCGAAGGGATCCTTGTAAGTCTTGAAGTTTTAACTCTCCAATATTTTTTATAAATGCTTGTAAAACATAAAAAAAATGTCATCTTTTTAGTCAAATATGAATAGGAATACTAATAGCAATATTCAAAACTTAGCTTAGGAGTAAAAGCAACTTAATTATTAATCTAAATAAATTTTGTAAGTTTTGTGACTTACAAAAATATCCGTTGACGTATTCGTAAAATTGGAATCTTGATATTGATATCAATAATTTAATCCTTGCTCATGTCAACTAAAAGATGTCATGAAATGCTTGTTTCTTGTTTTGGAGGGAAAAAAGAAAGAAAGAAAGAAAAAGATCCAATGAAATACAAGTGATAAATTTTCCAAATGTCTTCCCCACTATCCTTTTAAGTTTTACTGGATCTCCCTTTTCATTGTGGCTATTCTATTACGGGTGCTTATATATGTAGCTTCTCTATATATGAATGTCAGAATGTAGTGGGCCAAATCTCAAAGTAGATCTGCAATGCAGGTAAAAAAGGCAGAGGAGTTACCACAAACATGTTCCAAAGCAGATACCGAACCGGAGTCGTCAGATGAATCTGATATTGAAGTTCTTGCCATTGAAGGTACTTTAAATTTACTGAAGTGATGCTATTTTGGCTTGGTCTTCTAATTGTATTTTATTTATTTAAAACTTGTATCTCATTTTCAAATAAGTATTAATGTGTTACAATGGTTTGTATTGTTGTAATTTTCCCCCCAACCCCCATATATTGAACTAGAAAAAAAAAGGATAAATATTATTATATTTTCATTTTCGGAGGAAGTGAGAGAGTGGTGGATTGAACTGACTTTTTTTCTTCTCTCCTGTAATTTTAACCTGAGTTCTGTATTTTTGAAGTTTAAGCCACCTATGAAGAGGGTAGTCGAGGTTGTTAATTGGTTACCACTTATTGGTTATTACTTTACTGCATCTCATTTTTCTTTGTTATTATAGTTCTAAATGCTGGATTATTGATATGTGTCGAGTGCTACACCTTTGTTAAATTTTAGTTGTACATCATTTTCAGATTTATTTTGTTCTGTTTTATATGTTCTACTATTGTAGATCACTCAGACCCTTAGTTTTAAAAAAATGCTAAATTTTATAAGGTCATTCTTAAACTTTGCCATTTGTTTAAAATATGCCCCTATTCTTTTAAAAGTTGCAATATTTTACCCTTGACCTTTCATAAATATTTCAAAACTATTTTTGGAGGAGAAATCCTTTAGAATTTCAAATGAAATGAAGACTTGGAACAGTGTGTAGTGGACTACCGCAAGTGCAATTTCTGTTCTAATTCTCTGGTTCCTCTAAATTTCCCGCTAATACTTTATAGGCCAGCATTTGTTTCAAGTCTAAGCCTACCTGTGCGGGTTTGTGAGGTTTTGATTTGTGGGTTATATAGTTATTTCCCCCTTCGATGTTATCTTTATTCTCCTTTTGTCTTTGCGAAAGTGGCCGCAGAGTACAACAGTAGGAAAACCCCATGAAATTTCTTTAAATGCTCACATTGAATCCTAAACTAATTTCTAACAAAATTATTTGTGGCTGGGCTAGGTTTGGAGAACTAATATTTTTCTTTGATCTCCCATCTTGAAGAAAGTTAAATCATATTCGCATCTTACAGAAAACAGAGTTGGTGTTTCTTCTGAATGGTGGGGCTACAAATATGGATTTATTTCCGGAGGATATTTGGGTGCCGAATCTAAACGAAGAAAAGGCCTTCAAACCAAAAGCAATGAAAATGTGCATGAGAGAACTGCCTTTCATGAAGATGATCAAGAGAATCTATACAAGCTTGTCCAAGTATGTCATCTTTAAATTTTATTTTATGAATTTTTGGTATCGGAAAATTACAGTATAGTGGGATATAATATTTCAGAGAATAATGTTGTGGAGTTCTATGGTGCAACAATATCTGTCTTCTGTTCATGGATCATGCGTTTCTTTCACAGATGGTACCTAATAAATTTTTCATATTTTGGGACTTTATAGGATAAATCCACAACTGGAAAGCAAGGACTCGGGATTAAGAGTAGACCAAAGAAAATAGCGGGCTGCTACTTTCAAGGGAAAAAAACTTCCTTTGATGAAAGTGACAATGAAGACTCCAGTGATGCCGCACCTCCCTTGAAACGGAAGTATGATGACTCCTTCAGCACAACAACGGTAAAATCTGATGGGCAGCAGAAAGTGAAGTTGAGAAAATTGTGTAAAACGATTCTTGGCCAAGTATGTTACCAATTGTTGGGAGAGATATTATTTTCTTGTTTATATGTTTCTCTAAAGGCATTAGTGATCTTGTTATTGTATAGGCACCTGGGGAATCTTTAAAGCTGAAGCAGCTGAAAGCTTTGATTGATGAACGTGCCACTTCAGTTTTTGCCAACTATTCTTCTAAGAAAGATGCACTTGCTTATTTGAAACAGAAGGTATGGTTTTTTAGCCTGTTGGATGTATACCGCACATTTTCTAAGCATTTTGACAATACTTGATTTTTGGGAAAATTATCTTTTGATCCTAATTTCTGTATTGTGGTTTCTATTTGGTCTATTAGATTCAAAATGTTATATTCCATTAGATTCAAAATGCTATATTTTTACCCTTGAGGTTTGAGTTTGGTTTTTCATGTGATCTTTAGGTTTTAAAACTTATGCAACTTAAGTTTTAAGATTTTACACATATCCCTAGATAGTTAACACAAAGAACCAAGTGTGAGCATTCATTGAAACCTTGGAGTAAATTTGTAAATCTTGAACCCTAGGATCAAGTGAAAATTAATCTCATAACTCAAGGGATAAAATTATTATAACAATTTGAAACTTAGGGGGGACCTATTGGAAATTAAACTTAGGTAAAAGTGTAATATTTTAAAACTTAAAGACCAAATGGAACTTGAGGATCAAATAGGTGTGTCTTGATTTTTCAAAGGAATTGCTTGATGGCAATGGATGTTCTTTTTCATGTTTGTGGTTGCAGCTTGAGAGCAGTGGGAAGTTTTTGGTAGAAGGGAAAAGAGTGACTCTGCGGTCAAGGAGTGGTTGACAATTTTGTAGTTTAGTCTGAAATACCTGTGGCGATCTGTATATTGAAGAGAGATTAGAGGACAAATATATATATCGAGCTCTCTTGTGGTATTTTCTTTAAACCAAATTTTGTTCCATCAAACTATTCATTTCTTCTGCCTCATCCTACGCCTGATTATATAGGTAGGCAGAGGCTATGTTAGAAAGAGCTTTGATTATTTCTATTAGTAATGTTCTTTGAATTATGGTATTGGATTCTAATTTATATAAAAGGTTG TCTAGGTTTGGGAGTGCTTCGATCAAACTCTTCTCTTCCACAACCTCAGGAGACACACACAAAGTCGGCCGTGGATCTTCTTCACCGACAACCAACTAGAAGCCATGGCTGCTCCCGAAGCTCCTGTCTGTTACGTCGGCGTCGCTAGACAATCCGCAGCTTTTCGTCTCATGAAGCAGATGGGATGGGAAGAAGGAGAAGGGCTTGGCAAGGACAAGCAAGGGATCAAAGGCCATGTTAGAATTAAAAATAAACAAGATACTGCCGGAATTGGCACTGAGAAGCAGAACAATTGGGCTTTTGATACCACACAATTTGACAACATCTTGAAGAGACTGAAAGTGCAAGCAGTAAAAAACAGTGAGGAAGAGAAAGATGACACTTCGGTGGAAACTGTGGATGATGCAACTAATGATCAGGATCTGGTGACTAAGGCAACACGACCACAAGGAAGATACAAGAGAAGAGAGAGAGGAAAGCTTGTAAAAAAGGCAGAGGAGTTACCACAAACATGTTCCAAAGCAGATACCGAACCGGAGTCGTCAGATGAATCTGATATTGAAGTTCTTGCCATTGAAGAAAACAGAGTTGGTGTTTCTTCTGAATGGTGGGGCTACAAATATGGATTTATTTCCGGAGGATATTTGGGTGCCGAATCTAAACGAAGAAAAGGCCTTCAAACCAAAAGCAATGAAAATGTGCATGAGAGAACTGCCTTTCATGAAGATGATCAAGAGAATCTATACAAGCTTGTCCAAGATAAATCCACAACTGGAAAGCAAGGACTCGGGATTAAGAGTAGACCAAAGAAAATAGCGGGCTGCTACTTTCAAGGGAAAAAAACTTCCTTTGATGAAAGTGACAATGAAGACTCCAGTGATGCCGCACCTCCCTTGAAACGGAAGTATGATGACTCCTTCAGCACAACAACGGTAAAATCTGATGGGCAGCAGAAAGTGAAGTTGAGAAAATTGTGTAAAACGATTCTTGGCCAAGCACCTGGGGAATCTTTAAAGCTGAAGCAGCTGAAAGCTTTGATTGATGAACGTGCCACTTCAGTTTTTGCCAACTATTCTTCTAAGAAAGATGCACTTGCTTATTTGAAACAGAAGCTTGAGAGCAGTGGGAAGTTTTTGGTAGAAGGGAAAAGAGTGACTCTGCGGTCAAGGAGTGGTTGACAATTTTGTAGTTTAGTCTGAAATACCTGTGGCGATCTGTATATTGAAGAGAGATTAGAGGACAAATATATATATCGAGCTCTCTTGTGGTATTTTCTTTAAACCAAATTTTGTTCCATCAAACTATTCATTTCTTCTGCCTCATCCTACGCCTGATTATATAGGTAGGCAGAGGCTATGTTAGAAAGAGCTTTGATTATTTCTATTAGTAATGTTCTTTGAATTATGGTATTGGATTCTAATTTATATAAAAGGTTG ATGGCTGCTCCCGAAGCTCCTGTCTGTTACGTCGGCGTCGCTAGACAATCCGCAGCTTTTCGTCTCATGAAGCAGATGGGATGGGAAGAAGGAGAAGGGCTTGGCAAGGACAAGCAAGGGATCAAAGGCCATGTTAGAATTAAAAATAAACAAGATACTGCCGGAATTGGCACTGAGAAGCAGAACAATTGGGCTTTTGATACCACACAATTTGACAACATCTTGAAGAGACTGAAAGTGCAAGCAGTAAAAAACAGTGAGGAAGAGAAAGATGACACTTCGGTGGAAACTGTGGATGATGCAACTAATGATCAGGATCTGGTGACTAAGGCAACACGACCACAAGGAAGATACAAGAGAAGAGAGAGAGGAAAGCTTGTAAAAAAGGCAGAGGAGTTACCACAAACATGTTCCAAAGCAGATACCGAACCGGAGTCGTCAGATGAATCTGATATTGAAGTTCTTGCCATTGAAGAAAACAGAGTTGGTGTTTCTTCTGAATGGTGGGGCTACAAATATGGATTTATTTCCGGAGGATATTTGGGTGCCGAATCTAAACGAAGAAAAGGCCTTCAAACCAAAAGCAATGAAAATGTGCATGAGAGAACTGCCTTTCATGAAGATGATCAAGAGAATCTATACAAGCTTGTCCAAGATAAATCCACAACTGGAAAGCAAGGACTCGGGATTAAGAGTAGACCAAAGAAAATAGCGGGCTGCTACTTTCAAGGGAAAAAAACTTCCTTTGATGAAAGTGACAATGAAGACTCCAGTGATGCCGCACCTCCCTTGAAACGGAAGTATGATGACTCCTTCAGCACAACAACGGTAAAATCTGATGGGCAGCAGAAAGTGAAGTTGAGAAAATTGTGTAAAACGATTCTTGGCCAAGCACCTGGGGAATCTTTAAAGCTGAAGCAGCTGAAAGCTTTGATTGATGAACGTGCCACTTCAGTTTTTGCCAACTATTCTTCTAAGAAAGATGCACTTGCTTATTTGAAACAGAAGCTTGAGAGCAGTGGGAAGTTTTTGGTAGAAGGGAAAAGAGTGACTCTGCGGTCAAGGAGTGGTTGA MAAPEAPVCYVGVARQSAAFRLMKQMGWEEGEGLGKDKQGIKGHVRIKNKQDTAGIGTEKQNNWAFDTTQFDNILKRLKVQAVKNSEEEKDDTSVETVDDATNDQDLVTKATRPQGRYKRRERGKLVKKAEELPQTCSKADTEPESSDESDIEVLAIEENRVGVSSEWWGYKYGFISGGYLGAESKRRKGLQTKSNENVHERTAFHEDDQENLYKLVQDKSTTGKQGLGIKSRPKKIAGCYFQGKKTSFDESDNEDSSDAAPPLKRKYDDSFSTTTVKSDGQQKVKLRKLCKTILGQAPGESLKLKQLKALIDERATSVFANYSSKKDALAYLKQKLESSGKFLVEGKRVTLRSRSG
BLAST of ClCG01G002320 vs. Swiss-Prot
Match: PINX1_HUMAN (PIN2/TERF1-interacting telomerase inhibitor 1 OS=Homo sapiens GN=PINX1 PE=1 SV=2) HSP 1 Score: 57.4 bits (137), Expect = 3.8e-07 Identity = 35/158 (22.15%), Postives = 69/158 (43.67%), Query Frame = 1
BLAST of ClCG01G002320 vs. Swiss-Prot
Match: GPTC4_XENTR (G patch domain-containing protein 4 OS=Xenopus tropicalis GN=gpatch4 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 5.4e-06 Identity = 39/129 (30.23%), Postives = 59/129 (45.74%), Query Frame = 1
BLAST of ClCG01G002320 vs. TrEMBL
Match: A0A0A0KQU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G152210 PE=4 SV=1) HSP 1 Score: 637.1 bits (1642), Expect = 1.3e-179 Identity = 324/372 (87.10%), Postives = 341/372 (91.67%), Query Frame = 1
BLAST of ClCG01G002320 vs. TrEMBL
Match: D7TV66_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g00400 PE=4 SV=1) HSP 1 Score: 452.2 bits (1162), Expect = 5.8e-124 Identity = 233/374 (62.30%), Postives = 284/374 (75.94%), Query Frame = 1
BLAST of ClCG01G002320 vs. TrEMBL
Match: W9SJ56_9ROSA (PIN2/TERF1-interacting telomerase inhibitor 1 OS=Morus notabilis GN=L484_006706 PE=4 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 2.7e-121 Identity = 238/372 (63.98%), Postives = 277/372 (74.46%), Query Frame = 1
BLAST of ClCG01G002320 vs. TrEMBL
Match: M5WMH7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007507mg PE=4 SV=1) HSP 1 Score: 434.1 bits (1115), Expect = 1.6e-118 Identity = 231/372 (62.10%), Postives = 277/372 (74.46%), Query Frame = 1
BLAST of ClCG01G002320 vs. TrEMBL
Match: V4TH98_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020644mg PE=4 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 8.1e-118 Identity = 232/378 (61.38%), Postives = 275/378 (72.75%), Query Frame = 1
BLAST of ClCG01G002320 vs. TAIR10
Match: AT1G63980.1 (AT1G63980.1 D111/G-patch domain-containing protein) HSP 1 Score: 357.5 bits (916), Expect = 9.9e-99 Identity = 203/404 (50.25%), Postives = 259/404 (64.11%), Query Frame = 1
BLAST of ClCG01G002320 vs. NCBI nr
Match: gi|778699474|ref|XP_011654716.1| (PREDICTED: G patch domain-containing protein 4 isoform X2 [Cucumis sativus]) HSP 1 Score: 642.1 bits (1655), Expect = 5.7e-181 Identity = 324/370 (87.57%), Postives = 341/370 (92.16%), Query Frame = 1
BLAST of ClCG01G002320 vs. NCBI nr
Match: gi|659073959|ref|XP_008437345.1| (PREDICTED: G patch domain-containing protein 4 isoform X2 [Cucumis melo]) HSP 1 Score: 640.6 bits (1651), Expect = 1.7e-180 Identity = 321/370 (86.76%), Postives = 342/370 (92.43%), Query Frame = 1
BLAST of ClCG01G002320 vs. NCBI nr
Match: gi|449452274|ref|XP_004143884.1| (PREDICTED: G patch domain-containing protein 4 isoform X1 [Cucumis sativus]) HSP 1 Score: 637.1 bits (1642), Expect = 1.8e-179 Identity = 324/372 (87.10%), Postives = 341/372 (91.67%), Query Frame = 1
BLAST of ClCG01G002320 vs. NCBI nr
Match: gi|659073957|ref|XP_008437343.1| (PREDICTED: G patch domain-containing protein 4 isoform X1 [Cucumis melo]) HSP 1 Score: 635.6 bits (1638), Expect = 5.3e-179 Identity = 321/372 (86.29%), Postives = 342/372 (91.94%), Query Frame = 1
BLAST of ClCG01G002320 vs. NCBI nr
Match: gi|225426146|ref|XP_002278325.1| (PREDICTED: G patch domain-containing protein 4 isoform X2 [Vitis vinifera]) HSP 1 Score: 452.2 bits (1162), Expect = 8.4e-124 Identity = 233/374 (62.30%), Postives = 284/374 (75.94%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |