ClCG00G000360 (gene) Watermelon (Charleston Gray)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGAAATTCAGAAGCCTATTCTTGTGGAGCTGAGTTCTCTTTTGTCTGGAAAAAGAGGTATAATATGCCATAGTGTTCACTCTGAGTTCAAGGAACTAGTAACAATGTGTGGGGGGCAGAAGGAGAAGTCCAGAGCAAACTACTTACTAAAGCACATCATGTGAGTCCAATAGAACAAGCTTTTGTTGTTCTTTAATCTTCTTAGTTTGATCCTTGATCCACATTCATTTGAAACACGTGCATAATCTGAATTTATCACTTTTAGTTTCATAAATCTAAAAATTGTAACAATATTTTGGGGATTAGGTGTTGGAGTTATTTGGAAATCTCCAAATAGTTGCAGAGAAAAGAATAATTTTTCCTTCAAAGGCCATGTAAATTATAAAAAGTTAAAGAGAATGATTTCATTTCATGGTGACCATTTATCTAAGATTTAATATCCTACGAGTTACCCTTAACAATCAAATATAGTAGGGTTAGGCAATTATCTAGTGAGAATAATCAAGGTGTGTGTAAGCTAAGCTTGGACACCCACCAATGCTAAAAAAAATGGGAAAAAAAGTAGGTAGAAATGCTAGTTAGTATTACATAATTCTTCCCTCTTGGAGAAATTACAACCTTCCATTCCTCGTATTGTGATTTTCTAAGCTTCATCAGAAACTCAATTTTCTTGAGTAGATTTGTGGCCTTCTGCTATCAATACAGTTATTCTGTCCGTACAGCCACATGGACCATGTTATTGATACGTTTATTTTCTAGACATATAGATTACACATTTGTGCACTGATGATCTGGAAAATGAAACAGGGTTGTGCCAGACATGGCATCGAAACGTATGACATGTCTCCCGACCACGAGAAAGTTAGCTTTGAAGAACAAGGTTGTGTTTGGTACTGGTGACTACTGCAATGCCCCGACCTTAACTGCGAACATGTCATTTGTTCGAGCAGTATCCCAGACTGGGATGTCCCTTTTTACCTTTGAGCATAGGCCGCGAGCTTTAACTGGCGATTAG ATGTCAGAAATTCAGAAGCCTATTCTTGTGGAGCTGAGTTCTCTTTTGTCTGGAAAAAGAGGTATAATATGCCATAGTGTTCACTCTGAGTTCAAGGAACTAGTAACAATGTGTGGGGGGCAGAAGGAGAAGTCCAGAGCAAACTACTTACTAAAGCACATCATGGTTGTGCCAGACATGGCATCGAAACGTATGACATGTCTCCCGACCACGAGAAAGTTAGCTTTGAAGAACAAGGTTGTGTTTGGTACTGGTGACTACTGCAATGCCCCGACCTTAACTGCGAACATGTCATTTGTTCGAGCAGTATCCCAGACTGGGATGTCCCTTTTTACCTTTGAGCATAGGCCGCGAGCTTTAACTGGCGATTAG ATGTCAGAAATTCAGAAGCCTATTCTTGTGGAGCTGAGTTCTCTTTTGTCTGGAAAAAGAGGTATAATATGCCATAGTGTTCACTCTGAGTTCAAGGAACTAGTAACAATGTGTGGGGGGCAGAAGGAGAAGTCCAGAGCAAACTACTTACTAAAGCACATCATGGTTGTGCCAGACATGGCATCGAAACGTATGACATGTCTCCCGACCACGAGAAAGTTAGCTTTGAAGAACAAGGTTGTGTTTGGTACTGGTGACTACTGCAATGCCCCGACCTTAACTGCGAACATGTCATTTGTTCGAGCAGTATCCCAGACTGGGATGTCCCTTTTTACCTTTGAGCATAGGCCGCGAGCTTTAACTGGCGATTAG MSEIQKPILVELSSLLSGKRGIICHSVHSEFKELVTMCGGQKEKSRANYLLKHIMVVPDMASKRMTCLPTTRKLALKNKVVFGTGDYCNAPTLTANMSFVRAVSQTGMSLFTFEHRPRALTGD
BLAST of ClCG00G000360 vs. Swiss-Prot
Match: CG025_DANRE (UPF0415 protein C7orf25 homolog OS=Danio rerio GN=zgc:55781 PE=2 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 2.3e-17 Identity = 48/119 (40.34%), Postives = 65/119 (54.62%), Query Frame = 1
BLAST of ClCG00G000360 vs. Swiss-Prot
Match: CG025_MOUSE (UPF0415 protein C7orf25 homolog OS=Mus musculus PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 8.9e-17 Identity = 45/119 (37.82%), Postives = 66/119 (55.46%), Query Frame = 1
BLAST of ClCG00G000360 vs. Swiss-Prot
Match: CG025_HUMAN (UPF0415 protein C7orf25 OS=Homo sapiens GN=C7orf25 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.2e-16 Identity = 45/119 (37.82%), Postives = 65/119 (54.62%), Query Frame = 1
BLAST of ClCG00G000360 vs. Swiss-Prot
Match: CG025_XENLA (UPF0415 protein C7orf25 homolog OS=Xenopus laevis PE=2 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.5e-16 Identity = 47/119 (39.50%), Postives = 65/119 (54.62%), Query Frame = 1
BLAST of ClCG00G000360 vs. Swiss-Prot
Match: CG025_BOVIN (UPF0415 protein C7orf25 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.0e-16 Identity = 45/119 (37.82%), Postives = 65/119 (54.62%), Query Frame = 1
BLAST of ClCG00G000360 vs. TrEMBL
Match: A0A0A0L776_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G039320 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 3.1e-56 Identity = 113/123 (91.87%), Postives = 116/123 (94.31%), Query Frame = 1
BLAST of ClCG00G000360 vs. TrEMBL
Match: F6HE81_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g00350 PE=4 SV=1) HSP 1 Score: 191.0 bits (484), Expect = 8.3e-46 Identity = 97/123 (78.86%), Postives = 106/123 (86.18%), Query Frame = 1
BLAST of ClCG00G000360 vs. TrEMBL
Match: A0A068VGX0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00010989001 PE=4 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.0e-43 Identity = 91/122 (74.59%), Postives = 103/122 (84.43%), Query Frame = 1
BLAST of ClCG00G000360 vs. TrEMBL
Match: B9S0S1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1222690 PE=4 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 1.7e-43 Identity = 91/123 (73.98%), Postives = 104/123 (84.55%), Query Frame = 1
BLAST of ClCG00G000360 vs. TrEMBL
Match: A0A118K769_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_009849 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 2.3e-43 Identity = 89/123 (72.36%), Postives = 104/123 (84.55%), Query Frame = 1
BLAST of ClCG00G000360 vs. TAIR10
Match: AT1G73380.1 (AT1G73380.1 unknown protein) HSP 1 Score: 161.4 bits (407), Expect = 3.6e-40 Identity = 83/122 (68.03%), Postives = 96/122 (78.69%), Query Frame = 1
BLAST of ClCG00G000360 vs. NCBI nr
Match: gi|449460515|ref|XP_004147991.1| (PREDICTED: uncharacterized protein LOC101214095 [Cucumis sativus]) HSP 1 Score: 225.7 bits (574), Expect = 4.4e-56 Identity = 113/123 (91.87%), Postives = 116/123 (94.31%), Query Frame = 1
BLAST of ClCG00G000360 vs. NCBI nr
Match: gi|659096191|ref|XP_008448969.1| (PREDICTED: UPF0415 protein C7orf25 homolog [Cucumis melo]) HSP 1 Score: 225.7 bits (574), Expect = 4.4e-56 Identity = 113/123 (91.87%), Postives = 116/123 (94.31%), Query Frame = 1
BLAST of ClCG00G000360 vs. NCBI nr
Match: gi|720064486|ref|XP_010275966.1| (PREDICTED: uncharacterized protein LOC104610845 isoform X2 [Nelumbo nucifera]) HSP 1 Score: 192.6 bits (488), Expect = 4.1e-46 Identity = 93/123 (75.61%), Postives = 106/123 (86.18%), Query Frame = 1
BLAST of ClCG00G000360 vs. NCBI nr
Match: gi|720064483|ref|XP_010275965.1| (PREDICTED: uncharacterized protein LOC104610845 isoform X1 [Nelumbo nucifera]) HSP 1 Score: 192.6 bits (488), Expect = 4.1e-46 Identity = 93/123 (75.61%), Postives = 106/123 (86.18%), Query Frame = 1
BLAST of ClCG00G000360 vs. NCBI nr
Match: gi|720064489|ref|XP_010275967.1| (PREDICTED: uncharacterized protein LOC104610845 isoform X3 [Nelumbo nucifera]) HSP 1 Score: 192.6 bits (488), Expect = 4.1e-46 Identity = 93/123 (75.61%), Postives = 106/123 (86.18%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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