ClCG00G000290 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG00G000290
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	ATP-dependent RNA helicase
Location	CG_Chr00 : 384501 .. 386168 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGCTTTAGTACCTGGCAGGTTGTTTCTGTTTGCTGGAGAGTCGTTTCCCTTCCATAAGTTACCGCAAGTTTGTCGATCGACTTTGTTTCACAGTGGTGTGTTTTGTCTTAACAAGGCTGAGATAAACCATGGACCCCTTACTCTTGCAAGCCTTGGGTTCAAAAGTGAGTTTCAGAAGACAGACGAGAGCAAAGTGAATAAAGCTACCGAGTTAGATTCTCCATGGGATATCTCGAAAAGTAGAGTAAAGGTTGTTCGAAACAATGAAAAGAAGGTGGTTGGAGCGAGAAATTTGGTAGAAACACAGATGGCTCCCTTTGCTGCCAAGTCATTTTCTGAGCTTGGTCTTCCAGATTCATTAATAGAGAGGTTAGAGAGTGAAGGCTTCACAGTTCCTACCGACATTCAATCTGCATCAATTCCCACCATTTTGAAAAAACACGATGTTGTCATTCAATCTTACACGGGTTCTGGAAAAACATTGGCATATGTTCTTCCCATCCTTTCAGAAATAGGTCCGTTTAAGAATAGAGTTTCAAATTACAATGAGGAACCTGGAAAGAAAAAGGAGATAGAGGCAGTTATTGTAGCTCCATCAAGGGAGCTAGGAATGCAAATTGTGAGAGAGGTCGAGAAGATATTAGGACCTGCAAACCGAAAAGTAGTTCAGCAGCTCGTTGGAGGTGCGAACCGATCAAGACAGGAGGAAGCTTTAAAGAAAAACAAACCTGCCATTGTTGTTGGGACACCAGGAAGGATTGCAGAGATTAGTGCAGCTGGGAAGCTTCACACACATGGTTGTAGCTTCTTGATTTTAGATGAGGTAGACGAACTACTTTCGTTTAATTTTCGGGAAGACATGCATCGTATATTGGAGCATGTTGGAAGAAGACCAGGTGCCAATTCACAAGGATCAGAAAACACTCAAGCAAGAAGGGCAGAACGACGGTTAGTCATGGTGTCTGCAACGGTGCCATTCTCAGTAGTAAGGGCAGCTAAAAGCTGGGGATGTGACCCGCTTCTTGTCAAGGCCAACAAGGTTGCTCCCCTTGAATCGGTTCCTCTTTCGGGACCGGTTAATCTGAGAGGGCCTTCTTCTGGATCGACGGCGAATTCAACTTTGCAAAGTCAGACTGGCATTGATACTCTACCTCCCTCTTTAAAACACTACTATTGTACATCAAGGTTGCAGCATAAGGTTGATATGTTAAGACGATGCATTCATGCACTCGATGCCAAATTCGTGATGGTTTTCATGAACCATACAAAGCAACTAAGGGATGTCGTCTTCAAGTTAAAGGCTCGTGGGGTGACTGCGGCAGAGCTACATGGGGATCTAGGAAAACTTGCAAGATCAACTACTTTGAAAAGTTTCAAGAATGGTGAATTAAGAGTTTTAGTGACCAATGAATTATCGGCTAGGGGTTTGGACATTGCTGAATGTGATCTTGTAGTCAATCTGGATCTGCCTACAGATTCAATTCACTATGCACATCGAGCTGGCCGGACGGGTCGGCTCGGAAGGATGGGGACTGTGGTGAGTATTTGTGAGGAGCCAGAAGTGTTTGTGGTGAAGAAACTGCAGAAGCAACTTGGTGTGCCTATTTTAGCCTGTGATTTTAATGAGGGAAAGCTTGTTGTGAATGAAGAAGAGAAAATATAG

mRNA sequence

ATGAATGCTTTAGTACCTGGCAGGTTGTTTCTGTTTGCTGGAGAGTCGTTTCCCTTCCATAAGTTACCGCAAGTTTGTCGATCGACTTTGTTTCACAGTGGTGTGTTTTGTCTTAACAAGGCTGAGATAAACCATGGACCCCTTACTCTTGCAAGCCTTGGGTTCAAAAGTGAGTTTCAGAAGACAGACGAGAGCAAAGTGAATAAAGCTACCGAGTTAGATTCTCCATGGGATATCTCGAAAAGTAGAGTAAAGGTTGTTCGAAACAATGAAAAGAAGGTGGTTGGAGCGAGAAATTTGGTAGAAACACAGATGGCTCCCTTTGCTGCCAAGTCATTTTCTGAGCTTGGTCTTCCAGATTCATTAATAGAGAGGTTAGAGAGTGAAGGCTTCACAGTTCCTACCGACATTCAATCTGCATCAATTCCCACCATTTTGAAAAAACACGATGTTGTCATTCAATCTTACACGGGTTCTGGAAAAACATTGGCATATGTTCTTCCCATCCTTTCAGAAATAGGTCCGTTTAAGAATAGAGTTTCAAATTACAATGAGGAACCTGGAAAGAAAAAGGAGATAGAGGCAGTTATTGTAGCTCCATCAAGGGAGCTAGGAATGCAAATTGTGAGAGAGGTCGAGAAGATATTAGGACCTGCAAACCGAAAAGTAGTTCAGCAGCTCGTTGGAGGTGCGAACCGATCAAGACAGGAGGAAGCTTTAAAGAAAAACAAACCTGCCATTGTTGTTGGGACACCAGGAAGGATTGCAGAGATTAGTGCAGCTGGGAAGCTTCACACACATGGTTGTAGCTTCTTGATTTTAGATGAGGTAGACGAACTACTTTCGTTTAATTTTCGGGAAGACATGCATCGTATATTGGAGCATGTTGGAAGAAGACCAGGTGCCAATTCACAAGGATCAGAAAACACTCAAGCAAGAAGGGCAGAACGACGGTTAGTCATGGTGTCTGCAACGGTGCCATTCTCAGTAGTAAGGGCAGCTAAAAGCTGGGGATGTGACCCGCTTCTTGTCAAGGCCAACAAGGTTGCTCCCCTTGAATCGGTTCCTCTTTCGGGACCGGTTAATCTGAGAGGGCCTTCTTCTGGATCGACGGCGAATTCAACTTTGCAAAGTCAGACTGGCATTGATACTCTACCTCCCTCTTTAAAACACTACTATTGTACATCAAGGTTGCAGCATAAGGTTGATATGTTAAGACGATGCATTCATGCACTCGATGCCAAATTCGTGATGGTTTTCATGAACCATACAAAGCAACTAAGGGATGTCGTCTTCAAGTTAAAGGCTCGTGGGGTGACTGCGGCAGAGCTACATGGGGATCTAGGAAAACTTGCAAGATCAACTACTTTGAAAAGTTTCAAGAATGGTGAATTAAGAGTTTTAGTGACCAATGAATTATCGGCTAGGGGTTTGGACATTGCTGAATGTGATCTTGTAGTCAATCTGGATCTGCCTACAGATTCAATTCACTATGCACATCGAGCTGGCCGGACGGGTCGGCTCGGAAGGATGGGGACTGTGGTGAGTATTTGTGAGGAGCCAGAAGTGTTTGTGGTGAAGAAACTGCAGAAGCAACTTGGTGTGCCTATTTTAGCCTGTGATTTTAATGAGGGAAAGCTTGTTGTGAATGAAGAAGAGAAAATATAG

Coding sequence (CDS)

ATGAATGCTTTAGTACCTGGCAGGTTGTTTCTGTTTGCTGGAGAGTCGTTTCCCTTCCATAAGTTACCGCAAGTTTGTCGATCGACTTTGTTTCACAGTGGTGTGTTTTGTCTTAACAAGGCTGAGATAAACCATGGACCCCTTACTCTTGCAAGCCTTGGGTTCAAAAGTGAGTTTCAGAAGACAGACGAGAGCAAAGTGAATAAAGCTACCGAGTTAGATTCTCCATGGGATATCTCGAAAAGTAGAGTAAAGGTTGTTCGAAACAATGAAAAGAAGGTGGTTGGAGCGAGAAATTTGGTAGAAACACAGATGGCTCCCTTTGCTGCCAAGTCATTTTCTGAGCTTGGTCTTCCAGATTCATTAATAGAGAGGTTAGAGAGTGAAGGCTTCACAGTTCCTACCGACATTCAATCTGCATCAATTCCCACCATTTTGAAAAAACACGATGTTGTCATTCAATCTTACACGGGTTCTGGAAAAACATTGGCATATGTTCTTCCCATCCTTTCAGAAATAGGTCCGTTTAAGAATAGAGTTTCAAATTACAATGAGGAACCTGGAAAGAAAAAGGAGATAGAGGCAGTTATTGTAGCTCCATCAAGGGAGCTAGGAATGCAAATTGTGAGAGAGGTCGAGAAGATATTAGGACCTGCAAACCGAAAAGTAGTTCAGCAGCTCGTTGGAGGTGCGAACCGATCAAGACAGGAGGAAGCTTTAAAGAAAAACAAACCTGCCATTGTTGTTGGGACACCAGGAAGGATTGCAGAGATTAGTGCAGCTGGGAAGCTTCACACACATGGTTGTAGCTTCTTGATTTTAGATGAGGTAGACGAACTACTTTCGTTTAATTTTCGGGAAGACATGCATCGTATATTGGAGCATGTTGGAAGAAGACCAGGTGCCAATTCACAAGGATCAGAAAACACTCAAGCAAGAAGGGCAGAACGACGGTTAGTCATGGTGTCTGCAACGGTGCCATTCTCAGTAGTAAGGGCAGCTAAAAGCTGGGGATGTGACCCGCTTCTTGTCAAGGCCAACAAGGTTGCTCCCCTTGAATCGGTTCCTCTTTCGGGACCGGTTAATCTGAGAGGGCCTTCTTCTGGATCGACGGCGAATTCAACTTTGCAAAGTCAGACTGGCATTGATACTCTACCTCCCTCTTTAAAACACTACTATTGTACATCAAGGTTGCAGCATAAGGTTGATATGTTAAGACGATGCATTCATGCACTCGATGCCAAATTCGTGATGGTTTTCATGAACCATACAAAGCAACTAAGGGATGTCGTCTTCAAGTTAAAGGCTCGTGGGGTGACTGCGGCAGAGCTACATGGGGATCTAGGAAAACTTGCAAGATCAACTACTTTGAAAAGTTTCAAGAATGGTGAATTAAGAGTTTTAGTGACCAATGAATTATCGGCTAGGGGTTTGGACATTGCTGAATGTGATCTTGTAGTCAATCTGGATCTGCCTACAGATTCAATTCACTATGCACATCGAGCTGGCCGGACGGGTCGGCTCGGAAGGATGGGGACTGTGGTGAGTATTTGTGAGGAGCCAGAAGTGTTTGTGGTGAAGAAACTGCAGAAGCAACTTGGTGTGCCTATTTTAGCCTGTGATTTTAATGAGGGAAAGCTTGTTGTGAATGAAGAAGAGAAAATATAG

Protein sequence

MNALVPGRLFLFAGESFPFHKLPQVCRSTLFHSGVFCLNKAEINHGPLTLASLGFKSEFQKTDESKVNKATELDSPWDISKSRVKVVRNNEKKVVGARNLVETQMAPFAAKSFSELGLPDSLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKNRVSNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEALKKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRRPGANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKVAPLESVPLSGPVNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVFMNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDIAECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQKQLGVPILACDFNEGKLVVNEEEKI

Homology

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BLAST of ClCG00G000290 vs. Swiss-Prot
Match: RH47_ARATH (DEAD-box ATP-dependent RNA helicase 47, mitochondrial OS=Arabidopsis thaliana GN=RH47 PE=1 SV=2)

HSP 1 Score: 666.4 bits (1718), Expect = 2.7e-190
Identity = 342/554 (61.73%), Postives = 424/554 (76.53%), Query Frame = 1


Query: 1   MNALVPGRLFLFAGESFPFHKLPQVCRSTLFHSGVFCLNKAEINHGPLTLASLGFKSEFQ 60
           M A    R  +   +   F K+   C +T FH     L       G LTLASL   ++ +
Sbjct: 1   MAASTSTRFLVLLKDFSAFRKISWTCAATNFHRQSRFLCHVAKEDGSLTLASLDLGNKPR 60

Query: 61  KTDESKVNKATELDSPWDISKSRVKVVRNNEKKVVGARNLVETQMAPFAAKSFSELGLPD 120
           K  + K  K  E     ++ + +V+ V+N++ KVV  +   E     F+AKSF ELGLPD
Sbjct: 61  KFGKGKAMKL-EGSFVTEMGQGKVRAVKNDKMKVVKEKKPAEIVSPLFSAKSFEELGLPD 120

Query: 121 SLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKNRV 180
           SL++ LE EGF+VPTD+QSA++P I+K HD VIQSYTGSGKTLAY+LPILSEIGP   + 
Sbjct: 121 SLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSEIGPLAEKS 180

Query: 181 SNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEAL 240
            + + E  K+ EI+A+IVAPSRELGMQIVREVEK+LGP +R++VQQLVGGANR RQEEAL
Sbjct: 181 RSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGANRMRQEEAL 240

Query: 241 KKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRRP 300
           KKNKPAIVVGTPGRIAEIS  GKLHTHGC FL+LDEVDELLSFNFRED+HRILEHVG+R 
Sbjct: 241 KKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIHRILEHVGKRS 300

Query: 301 GANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKVAPLESVPLSGP 360
           GA  +G  +    RA R+ ++VSATVPFSV+RAAKSW  +P+LV+ANKV PL++V  S P
Sbjct: 301 GAGPKGEVD---ERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPLDTVQPSAP 360

Query: 361 VNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF 420
           V    P   +T+ +  Q QT I +LPP+LKHYYC S+ QHKVD LRRC+HALDA+ V+ F
Sbjct: 361 VMSLTP---TTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALDAQSVIAF 420

Query: 421 MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI 480
           MNH++QL+DVV+KL+ARG+ +AE+HGDLGKL RST LK FKNGE++VLVTNELSARGLD+
Sbjct: 421 MNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSARGLDV 480

Query: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQKQLGVPILAC 540
           AECDLVVNL+LPTD++HYAHRAGRTGRLGR GTVV++CEE +VF+VKK++KQLG+P L C
Sbjct: 481 AECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKKMEKQLGLPFLYC 540

Query: 541 DFNEGKLVVNEEEK 555
           +F +G+LVV EE+K
Sbjct: 541 EFVDGELVVTEEDK 547

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BLAST of ClCG00G000290 vs. Swiss-Prot
Match: RH47A_ORYSJ (DEAD-box ATP-dependent RNA helicase 47A OS=Oryza sativa subsp. japonica GN=Os02g0636300 PE=2 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 2.0e-185
Identity = 342/566 (60.42%), Postives = 420/566 (74.20%), Query Frame = 1


Query: 3   ALVPGRLFLFAGESFPFH--KLPQVCR--STLFHSGVFCLNKAEINHGPLTLASLGFKSE 62
           AL   R     G+  PF    LP+V R   T +H     +   E   GPLTLASL  +++
Sbjct: 14  ALASSRSCFVLGDHLPFRMLSLPRVVRFHQTAWHD----IQTVEDKSGPLTLASLEVQNK 73

Query: 63  FQKTDESKV---------NKATELDSPWDISKSRVKVVRNNEKKVVGARNLVETQMAPFA 122
            +   + +          ++A+ L+    +S    K V++   K    +  ++   + F+
Sbjct: 74  VEYVKKERATRTGGIKPSSRASALNMKPKVSSFNAKPVKSALPKSAVLKKTLKIDESLFS 133

Query: 123 AKSFSELGLPDSLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPI 182
           AKSF ELGLP  LI+RL  EG T PT++QSA+IP I +KHD VIQSYTGSGKTLAY+LPI
Sbjct: 134 AKSFEELGLPPLLIDRLNKEGLTAPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPI 193

Query: 183 LSEIGPFKNRVSNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVG 242
           LSEIGP K      + +  K+  +EAVIVAPSRELGMQIVREVEKILGP ++++VQQLVG
Sbjct: 194 LSEIGPLKRPTEQDSSD--KRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLVG 253

Query: 243 GANRSRQEEALKKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDM 302
           GANRSRQEEALKKNKP IVVGTPGRI+EISAAGKLHTH C FL+LDEVD+LLSFN+REDM
Sbjct: 254 GANRSRQEEALKKNKPIIVVGTPGRISEISAAGKLHTHSCRFLVLDEVDQLLSFNYREDM 313

Query: 303 HRILEHVGRRPGANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKV 362
           HRILEHVGR+ G +S+      ARR+ER+ ++VSAT+PFSV+RAA+SWG DP+LV+A  V
Sbjct: 314 HRILEHVGRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLVRAMSV 373

Query: 363 APLESVPLSGPVNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCI 422
            PLES+ +  PV L  P + S + S   +Q  +D+LPPSL+HYYCTS+ QHKVD LRRCI
Sbjct: 374 VPLESITVPRPV-LSQPDANSNSPSNSVNQAAVDSLPPSLEHYYCTSKAQHKVDTLRRCI 433

Query: 423 HALDAKFVMVFMNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLV 482
           HAL+A+ V+ FMN+TK L+DVVFKL+ARG+ A ELHGDLGKLARST LK FK+GE RVLV
Sbjct: 434 HALEAQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDGEFRVLV 493

Query: 483 TNELSARGLDIAECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKL 542
           TNELSARGLD+ ECDLV+NLDLPTDS HYAHRAGRTGRLGR GTVV+ICEE E FVV+K+
Sbjct: 494 TNELSARGLDVPECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTICEETETFVVRKM 553

Query: 543 QKQLGVPILACDFNEGKLVVNEEEKI 556
           +KQL VPI  C+F EGKL+V++EE +
Sbjct: 554 RKQLAVPIKPCEFTEGKLLVHKEEDV 572

[Close]

BLAST of ClCG00G000290 vs. Swiss-Prot
Match: RH47B_ORYSJ (DEAD-box ATP-dependent RNA helicase 47B OS=Oryza sativa subsp. japonica GN=Os03g0219700 PE=2 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 3.7e-179
Identity = 336/566 (59.36%), Postives = 411/566 (72.61%), Query Frame = 1


Query: 3   ALVPGRLFLFAGESFPFHKLPQVCRSTLFHSGVFC-LNKAEINHGPLTLASLGFKSEFQK 62
           AL   R     G++ P   L  + R+  FH   +      +     LTLASL  ++   K
Sbjct: 14  ALASSRSCFVLGDNLPLRML-SLPRAVRFHQTAWLGTETVQDKSASLTLASLEGQN---K 73

Query: 63  TDESKVNKATELDSPWDISKS-----RVKVVRNNEK-------KVVGARNLVETQMAPFA 122
            +  K  KAT +  P   S++     + KV   N K       K    +  ++   + F+
Sbjct: 74  VEYGKKEKATRIGGPKPSSRASALKVKPKVSSFNSKPAKSTLPKSAVVKKTLKIDESLFS 133

Query: 123 AKSFSELGLPDSLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPI 182
           AKSF ELGLP  LI+RL  EG + PT++QSA+IP I +KHD VIQSYTGSGKTLAY+LPI
Sbjct: 134 AKSFEELGLPPLLIDRLNKEGLSTPTEVQSAAIPIISQKHDAVIQSYTGSGKTLAYLLPI 193

Query: 183 LSEIGPFKNRVSNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVG 242
           LSEIGP K        +  K+  +EAVIVAPSRELGMQIVREVEKILGP ++++VQQLVG
Sbjct: 194 LSEIGPLKRPTEQDGSD--KRSGVEAVIVAPSRELGMQIVREVEKILGPNDKRLVQQLVG 253

Query: 243 GANRSRQEEALKKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDM 302
           GANRSRQEEALKKNKP IVVGTPGRI+EISA GKLHTHGC FL+LDEVD+LLSFN+REDM
Sbjct: 254 GANRSRQEEALKKNKPLIVVGTPGRISEISAGGKLHTHGCRFLVLDEVDQLLSFNYREDM 313

Query: 303 HRILEHVGRRPGANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKV 362
           HRILEHVGR+ G +S+      ARR+ER+ ++VSAT+PFSV+RAA+SWG DP+LV+A  V
Sbjct: 314 HRILEHVGRKSGTSSRDILGPLARRSERQTILVSATIPFSVIRAARSWGHDPVLVRAMSV 373

Query: 363 APLESVPLSGPVNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCI 422
            PL+S+ +  PV L    +   + S   +Q  +++LPPSL+HYYC S+ QHKVD LRRCI
Sbjct: 374 VPLDSITVPRPV-LSQTDANPNSPSNSVNQAAVNSLPPSLEHYYCISKAQHKVDTLRRCI 433

Query: 423 HALDAKFVMVFMNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLV 482
           HAL+A+ V+ FMN+TK L+DVVFKL+ARG+ A ELHGDLGKLARST LK FK+GE RVLV
Sbjct: 434 HALEAQTVIAFMNNTKPLKDVVFKLEARGMKATELHGDLGKLARSTVLKKFKDGEFRVLV 493

Query: 483 TNELSARGLDIAECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKL 542
           TNELSARGLD+ ECDLV+NLDLPTDS HYAHRAGRTGRLGR GTVV+ICEE E FVV+K+
Sbjct: 494 TNELSARGLDVPECDLVINLDLPTDSTHYAHRAGRTGRLGRKGTVVTICEETETFVVRKM 553

Query: 543 QKQLGVPILACDFNEGKLVVNEEEKI 556
           +KQL VPI  C+F EGKL+V+ EE +
Sbjct: 554 RKQLAVPIKPCEFTEGKLLVHNEEDV 572

[Close]

BLAST of ClCG00G000290 vs. Swiss-Prot
Match: CSHA_STAHJ (DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus haemolyticus (strain JCSC1435) GN=cshA PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.7e-46
Identity = 123/424 (29.01%), Postives = 205/424 (48.35%), Query Frame = 1


Query: 111 KSFSELGLPDSLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPIL 170
           ++F ELG+ D  +E LE+ GF  PT IQ  SIP  L+  D++ Q+ TG+GKT A+ +P++
Sbjct: 2   QNFKELGISDKTVETLEAMGFKEPTPIQKDSIPYTLEGKDILGQAQTGTGKTGAFGIPLI 61

Query: 171 SEIGPFKNRVSNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGG 230
            ++                +  ++A+I+AP+REL MQ+  ++ +     N +VV  + GG
Sbjct: 62  EKVVG--------------QSGVQALILAPTRELAMQVAEQLREFSRGQNVQVVT-VFGG 121

Query: 231 ANRSRQEEALKKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMH 290
               RQ +ALK+  P IVVGTPGR+ +      L T+G   LILDE DE+++  F +DM 
Sbjct: 122 MPIDRQIKALKRG-PQIVVGTPGRVIDHLNRRTLKTNGIHTLILDEADEMMNMGFIDDMR 181

Query: 291 RILEHVGRRPGANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKVA 350
            I++ +                   +R+ ++ SAT+P ++    + +             
Sbjct: 182 FIMDKIPAE----------------QRQTMLFSATMPKAIQTLVQQF------------- 241

Query: 351 PLESVPLSGPVNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCIH 410
                       ++ P    T N+ +          P +  YY   +   K D     + 
Sbjct: 242 ------------MKSPQIVKTMNNEMSD--------PQIDEYYTIVKELEKFDTFTNFLD 301

Query: 411 ALDAKFVMVFMNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVT 470
               +  +VF    +++ ++   L ++G  A  LHGD+ +  R   LK FKN ++ +LV 
Sbjct: 302 VHQPELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVA 360

Query: 471 NELSARGLDIAECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQ 530
            +++ARGLDI+    V N D+P D+  Y HR GRTGR G+ G  V+     E+  +++++
Sbjct: 362 TDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMDYIRQIE 360

Query: 531 KQLG 535
              G
Sbjct: 422 DSNG 360

[Close]

BLAST of ClCG00G000290 vs. Swiss-Prot
Match: CSHA_LACRE (ATP-dependent RNA helicase CshA OS=Lactobacillus reuteri GN=cshA PE=3 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 8.3e-46
Identity = 134/426 (31.46%), Postives = 208/426 (48.83%), Query Frame = 1


Query: 113 FSELGLPDSLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSE 172
           FSELGL DSL++ ++  G+   T IQ  +IP +L+  DV+ Q+ TG+GKT A+ LPI+  
Sbjct: 3   FSELGLSDSLLKAIKRSGYEEATPIQEQTIPMVLEGKDVIGQAQTGTGKTAAFGLPIIEN 62

Query: 173 IGPFKNRVSNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGAN 232
           +           E P     I+A+I++P+REL +Q   E+ + LG      VQ + GGA+
Sbjct: 63  VD---------TENPN----IQAIIISPTRELAIQTQEELYR-LGKDKHVRVQVVYGGAD 122

Query: 233 RSRQEEALKKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHRI 292
             RQ ++LK++ P I+VGTPGR+ +      +       L+LDE DE+L+  F ED+  I
Sbjct: 123 IRRQIKSLKQH-PQILVGTPGRLRDHINRHTVKLDHIKTLVLDEADEMLNMGFLEDIESI 182

Query: 293 LEHVGRRPGANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKVAPL 352
           ++                     +R+ ++ SAT+P  + R    +               
Sbjct: 183 IKETPD-----------------DRQTLLFSATMPPEIKRIGVQF--------------- 242

Query: 353 ESVPLSGPVNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCIHAL 412
               +S P  +R  +   T +   Q              YY  +R   K D++ R I   
Sbjct: 243 ----MSDPETVRIKAKELTTDLVDQ--------------YYVRARDYEKFDIMTRLIDVQ 302

Query: 413 DAKFVMVFMNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNE 472
           D    +VF    +++ ++   L ARG  AA +HGDL +  RS  +  FKN EL +LV  +
Sbjct: 303 DPDLTIVFGRTKRRVDELSKGLIARGYNAAGIHGDLTQDKRSKIMWKFKNNELDILVATD 362

Query: 473 LSARGLDIAECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQKQ 532
           ++ARGLDI+    V N D+P+D   Y HR GRTGR G  G  ++     E+  + +++K 
Sbjct: 363 VAARGLDISGVTHVYNYDIPSDPDSYVHRIGRTGRAGHHGVSLTFVTPNEMDYLHEIEKL 363

Query: 533 LGVPIL 539
             V +L
Sbjct: 423 TRVRML 363

[Close]

BLAST of ClCG00G000290 vs. TrEMBL
Match: A0A0A0L4J1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G038760 PE=4 SV=1)

HSP 1 Score: 1030.4 bits (2663), Expect = 8.1e-298
Identity = 522/555 (94.05%), Postives = 540/555 (97.30%), Query Frame = 1


Query: 1   MNALVPGRLFLFAGESFPFHKLPQVCRSTLFHSGVFCLNKAEINHGPLTLASLGFKSEFQ 60
           MNALVPGRLFLFAGESFPFHKLPQVCRST FHSGVFCLNKAE+NHGPLTLASLGFKSEFQ
Sbjct: 1   MNALVPGRLFLFAGESFPFHKLPQVCRSTFFHSGVFCLNKAEVNHGPLTLASLGFKSEFQ 60

Query: 61  KTDESKVNKATELDSPWDISKSRVKVVRNNEKKVVGARNLVETQMAPFAAKSFSELGLPD 120
           +TD+S+VNK  ELD+P DISKS+VK+VRNNEKKV GAR+ VE QMAPFAAKSFSELGL D
Sbjct: 61  ETDKSQVNKVAELDTPRDISKSKVKIVRNNEKKVGGARSSVEIQMAPFAAKSFSELGLAD 120

Query: 121 SLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKNRV 180
           +LIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKN +
Sbjct: 121 ALIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKNTI 180

Query: 181 SNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEAL 240
           SNYN+EPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEAL
Sbjct: 181 SNYNDEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEAL 240

Query: 241 KKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRRP 300
           KKNKP+IVVGTPGRIAEISA GKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRR 
Sbjct: 241 KKNKPSIVVGTPGRIAEISATGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRRS 300

Query: 301 GANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKVAPLESVPLSGP 360
           GANS+GSENTQARRAER+LVMVSATVPFSVVRAAKSWG DPLLVKANKVAPLESVP SGP
Sbjct: 301 GANSRGSENTQARRAERQLVMVSATVPFSVVRAAKSWGFDPLLVKANKVAPLESVPPSGP 360

Query: 361 VNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF 420
           VNLR PSSGST++STLQSQT IDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF
Sbjct: 361 VNLRAPSSGSTSDSTLQSQTAIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF 420

Query: 421 MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI 480
           MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI
Sbjct: 421 MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI 480

Query: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQKQLGVPILAC 540
           AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTV+SICEEPEVFVVKKLQKQLGVPILAC
Sbjct: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVLSICEEPEVFVVKKLQKQLGVPILAC 540

Query: 541 DFNEGKLVVNEEEKI 556
           DFNEGKLV+NEEEKI
Sbjct: 541 DFNEGKLVLNEEEKI 555

[Close]

BLAST of ClCG00G000290 vs. TrEMBL
Match: V4VLY9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019528mg PE=4 SV=1)

HSP 1 Score: 785.0 bits (2026), Expect = 5.9e-224
Identity = 392/554 (70.76%), Postives = 465/554 (83.94%), Query Frame = 1


Query: 1   MNALVPGRLFLFAGESFPFHKLPQVCRSTLFHSGVFCLNKAEINHGPLTLASLGFKSEFQ 60
           M ALV  RL L  GES P HK   V R    H+GV  L++   +HGPLTLASLG+KSEF+
Sbjct: 1   MPALVSTRLLLLVGESLPLHKFSCVSRMPWCHNGVRFLSQVGQHHGPLTLASLGYKSEFE 60

Query: 61  KTDESKVNKATELDSPWDISKSRVKVVRNNEKKVVGARNLVETQMAPFAAKSFSELGLPD 120
            T+++K NK  +   P +I K++VK VR++  K  G +  +E + APFAA SF ELGLP 
Sbjct: 61  STNKNKSNKPKKHSPPIEIPKAKVKAVRSDGIKAAGVKKSLEIESAPFAANSFLELGLPP 120

Query: 121 SLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKNRV 180
            L+ERLE EGF VPT++QSA+IP+ILK HDVVIQSYTGSGKTLAY+LPILS++GP K++ 
Sbjct: 121 LLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLKDKS 180

Query: 181 SNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEAL 240
           SN N E GKK +IEAVIVAPSRELGMQIVRE++K+LGP+++K VQQLVGGANRSRQEEAL
Sbjct: 181 SNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEAL 240

Query: 241 KKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRRP 300
           +KNKPAIVVGTPGRIAEISAAGKLHTHGC FL+LDE+DELLSFNFRE MHRI+EHVGRR 
Sbjct: 241 RKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRS 300

Query: 301 GANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKVAPLESVPLSGP 360
           GAN +  ++  A RAER+ +MVSATVPFSV+RAA+SWG DPLLV+A  V PLES+P +GP
Sbjct: 301 GANPREPKSALATRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGP 360

Query: 361 VNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF 420
            NL GP SGS++NS LQ++    +LPP+LKHYYC ++LQHKVD LRRC+HALDA+ V+ F
Sbjct: 361 GNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAF 420

Query: 421 MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI 480
           MN+T+QL+D VFKL+ARG+ AAELHGDLGKLARSTTLK FKNGE+RVLVTNELSARGLD+
Sbjct: 421 MNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDV 480

Query: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQKQLGVPILAC 540
           AECDLVVNLDLPTDSIHYAHRAGRTGRLGR GTVVSICEEPEVFVVKK+QKQL VPI AC
Sbjct: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQKQLAVPIQAC 540

Query: 541 DFNEGKLVVNEEEK 555
           +F EG+LV+ +EE+
Sbjct: 541 EFTEGRLVIGKEEE 554

[Close]

BLAST of ClCG00G000290 vs. TrEMBL
Match: A0A067FBI3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008602mg PE=4 SV=1)

HSP 1 Score: 782.7 bits (2020), Expect = 2.9e-223
Identity = 393/554 (70.94%), Postives = 466/554 (84.12%), Query Frame = 1


Query: 1   MNALVPGRLFLFAGESFPFHKLPQVCRSTLFHSGVFCLNKAEINHGPLTLASLGFKSEFQ 60
           M ALV  RL L  GES P HK   V R    H+GV  L++   +HGPLTLASLG+KSEF+
Sbjct: 1   MPALVSTRLLLLVGESLPLHKFSCVSRMPWCHNGVRFLSQVGRHHGPLTLASLGYKSEFE 60

Query: 61  KTDESKVNKATELDSPWDISKSRVKVVRNNEKKVVGARNLVETQMAPFAAKSFSELGLPD 120
            T+++K NK  +  SP +I K++VK VR++  K  G +  +E + APFAA SF ELGLP 
Sbjct: 61  PTNKNKSNKPKK-HSPIEIPKAKVKAVRSDGIKAAGVKKSLEIESAPFAANSFLELGLPP 120

Query: 121 SLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKNRV 180
            L+ERLE EGF VPT++QSA+IP+ILK HDVVIQSYTGSGKTLAY+LPILS++GP K++ 
Sbjct: 121 LLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLKDKS 180

Query: 181 SNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEAL 240
           SN N E GKK +IEAVIVAPSRELGMQIVRE++K+LGP+++K VQQLVGGANRSRQEEAL
Sbjct: 181 SNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEAL 240

Query: 241 KKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRRP 300
           +KNKPAIVVGTPGRIAEISAAGKLHTHGC FL+LDE+DELLSFNFRE MHRI+EHVGRR 
Sbjct: 241 RKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRS 300

Query: 301 GANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKVAPLESVPLSGP 360
           GAN +  ++  A RAER+ +MVSATVPFSV+RAA+SWG DPLLV+A  V PLES+P +GP
Sbjct: 301 GANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGP 360

Query: 361 VNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF 420
            NL GP SGS++NS LQ++    +LPP+LKHYYC ++LQHKVD LRRC+HALDA+ V+ F
Sbjct: 361 GNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAF 420

Query: 421 MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI 480
           MN+T+QL+D VFKL+ARG+ AAELHGDLGKLARSTTLK FKNGE+RVLVTNELSARGLD+
Sbjct: 421 MNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDV 480

Query: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQKQLGVPILAC 540
           AECDLVVNLDLPTDSIHYAHRAGRTGRLGR GTVVSICEEPEVFVVKK+QKQL VPI AC
Sbjct: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQKQLAVPIQAC 540

Query: 541 DFNEGKLVVNEEEK 555
           +F EG+LV+ +EE+
Sbjct: 541 EFTEGRLVIGKEEE 553

[Close]

BLAST of ClCG00G000290 vs. TrEMBL
Match: A5AK59_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g04190 PE=4 SV=1)

HSP 1 Score: 777.3 bits (2006), Expect = 1.2e-221
Identity = 391/554 (70.58%), Postives = 463/554 (83.57%), Query Frame = 1


Query: 1   MNALVPGRLFLFAGESFPFHKLPQVCRSTLFHSGVFCLNKAEINHGPLTLASLGFKSEFQ 60
           M AL   RL L  G+  P  KL  V R   FH  V  L++ +  HGPLTLASLGFKSEF+
Sbjct: 1   MQALASTRLLLLVGDCLPVGKLLHVSR---FHGSVRFLSRVDREHGPLTLASLGFKSEFE 60

Query: 61  KTDESKVNKATELDSPWDISKSRVKVVRNNEKKVVGARNLVETQMAPFAAKSFSELGLPD 120
            T  +K     +L++  ++SK++VK VR+NE K VG +  +E + APFAAKSFSELGLP 
Sbjct: 61  TTKGNKTKPLHQLNAVPEVSKNKVKAVRSNEMKAVGTKKSIEIEAAPFAAKSFSELGLPP 120

Query: 121 SLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKNRV 180
            LI+RLE EGF+VPTD+QSA+IPTILK HDVVIQSYTGSGKTLAY+LPILSE+GP KN+ 
Sbjct: 121 LLIDRLEREGFSVPTDVQSAAIPTILKNHDVVIQSYTGSGKTLAYLLPILSEVGPLKNKP 180

Query: 181 SNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEAL 240
            N +     K EIEAVI+APSRELGMQIVREVEK+LGPA++K+VQQLVGGANR+RQEEAL
Sbjct: 181 PNADNTSRNKMEIEAVILAPSRELGMQIVREVEKLLGPADKKLVQQLVGGANRTRQEEAL 240

Query: 241 KKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRRP 300
           KKNKP+IVVGTPGRIAE+SA+GKL THGC +L+LDEVDELLSFNFREDMHRILEHVGRR 
Sbjct: 241 KKNKPSIVVGTPGRIAEMSASGKLRTHGCRYLVLDEVDELLSFNFREDMHRILEHVGRRS 300

Query: 301 GANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKVAPLESVPLSGP 360
           GA+  G+++   RR ER+ +MVSATVPFSV+RAA+SWG DPLLV+A  V PLES+P +GP
Sbjct: 301 GADPHGTKSPLERRTERQTIMVSATVPFSVIRAARSWGRDPLLVQAKSVIPLESLP-TGP 360

Query: 361 VNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF 420
           VNL GP+S S+++S+LQ+Q   + LPP LKHY+C ++LQHK+D LRRC+HALDAK V+ F
Sbjct: 361 VNLLGPTSTSSSSSSLQTQAAAEGLPPVLKHYFCVTKLQHKIDTLRRCVHALDAKCVIAF 420

Query: 421 MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI 480
           MNHTK+L+D VFKL+ARG+ AAELHGDLGKLARSTTLK FKNGE+RVLVTNELSARGLD+
Sbjct: 421 MNHTKRLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDV 480

Query: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQKQLGVPILAC 540
           +ECDLVVNLDLPTDSIHYAHRAGRTGRLGR GTVV+ICEEPEVFVVKKLQ+QLGVPI AC
Sbjct: 481 SECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVVNICEEPEVFVVKKLQRQLGVPIQAC 540

Query: 541 DFNEGKLVVNEEEK 555
           +F EGKLV   +E+
Sbjct: 541 EFTEGKLVATTDEE 550

[Close]

BLAST of ClCG00G000290 vs. TrEMBL
Match: A0A061G4A4_THECC (P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theobroma cacao GN=TCM_016200 PE=4 SV=1)

HSP 1 Score: 775.4 bits (2001), Expect = 4.7e-221
Identity = 397/557 (71.27%), Postives = 461/557 (82.76%), Query Frame = 1


Query: 1   MNALVPGRLFLFAGESFPFHKLPQVCRSTLFHSGVFCLNKAEINHGPLTLASLGFKSEFQ 60
           M AL   RL LF GES PFH+ P V R       V  +++   N+GPLTLASLGFKSEF 
Sbjct: 1   MPALASTRLLLFFGESLPFHRFPSVSRKVWCQLSVRFVSQVNHNNGPLTLASLGFKSEFG 60

Query: 61  KTDESKVNKATELDSPWDISKSRVKVVRNNE---KKVVGARNLVETQMAPFAAKSFSELG 120
           +T+++K NK   L    +  KS+V+V+ +N     KVVG +  +E + APFAA+SF ELG
Sbjct: 61  ETNKNKGNKIERLSVSNEAPKSKVRVIGSNSIKGVKVVGVKKSLEIESAPFAAQSFPELG 120

Query: 121 LPDSLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFK 180
           LP  L+E LE+ G+TVPTD+QS ++PT+LK HDVVIQSYTGSGKTLAY+LPILSE+GP K
Sbjct: 121 LPPLLLESLETAGYTVPTDVQSVAVPTVLKGHDVVIQSYTGSGKTLAYLLPILSEVGPLK 180

Query: 181 NRVSNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQE 240
            +  N N E GKK+EIEAVIVAPSRELGMQIVRE EK+LGPA+++VVQQLVGGANRSRQE
Sbjct: 181 KKSPNGNGESGKKREIEAVIVAPSRELGMQIVREFEKLLGPADKRVVQQLVGGANRSRQE 240

Query: 241 EALKKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVG 300
           EALKKNKPAIVVGTPGRIAEISAAGKLHTHGC FL+LDEVDELLSFNFREDMHRILEHVG
Sbjct: 241 EALKKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEVDELLSFNFREDMHRILEHVG 300

Query: 301 RRPGANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKVAPLESVPL 360
           RR GA+ +GS    A+ AER+ +MVSATVP+SV+RAA+SWG DPLLV+A KV PLESV  
Sbjct: 301 RRSGADPRGS---LAKWAERQTIMVSATVPYSVIRAARSWGRDPLLVQAKKVMPLESVSP 360

Query: 361 SGPVNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFV 420
           SGPVNL  P+S S ++S +Q+Q    +LPP+LKHY+C ++LQHKVD LRRC+HALD+K V
Sbjct: 361 SGPVNLLRPTSSSDSSSNMQTQAASQSLPPALKHYHCVTKLQHKVDTLRRCVHALDSKSV 420

Query: 421 MVFMNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARG 480
           + FMNH KQL+D VFKL+ARG+ AAELHGDLGKL RSTTLK FK+GE+RVLVTNELSARG
Sbjct: 421 IAFMNHAKQLKDAVFKLEARGMKAAELHGDLGKLVRSTTLKKFKHGEVRVLVTNELSARG 480

Query: 481 LDIAECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQKQLGVPI 540
           LD+AECDLVVNLDLPTDSIHYAHRAGRTGRLGR GTVV+ICEEPEVFVVKKLQKQLGVPI
Sbjct: 481 LDVAECDLVVNLDLPTDSIHYAHRAGRTGRLGRKGTVVTICEEPEVFVVKKLQKQLGVPI 540

Query: 541 LACDFNEGKLVVNEEEK 555
            AC+F EGKL V EEEK
Sbjct: 541 PACEFTEGKLHVIEEEK 554

[Close]

BLAST of ClCG00G000290 vs. TAIR10
Match: AT1G12770.1 (AT1G12770.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 666.4 bits (1718), Expect = 1.5e-191
Identity = 342/554 (61.73%), Postives = 424/554 (76.53%), Query Frame = 1


Query: 1   MNALVPGRLFLFAGESFPFHKLPQVCRSTLFHSGVFCLNKAEINHGPLTLASLGFKSEFQ 60
           M A    R  +   +   F K+   C +T FH     L       G LTLASL   ++ +
Sbjct: 1   MAASTSTRFLVLLKDFSAFRKISWTCAATNFHRQSRFLCHVAKEDGSLTLASLDLGNKPR 60

Query: 61  KTDESKVNKATELDSPWDISKSRVKVVRNNEKKVVGARNLVETQMAPFAAKSFSELGLPD 120
           K  + K  K  E     ++ + +V+ V+N++ KVV  +   E     F+AKSF ELGLPD
Sbjct: 61  KFGKGKAMKL-EGSFVTEMGQGKVRAVKNDKMKVVKEKKPAEIVSPLFSAKSFEELGLPD 120

Query: 121 SLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKNRV 180
           SL++ LE EGF+VPTD+QSA++P I+K HD VIQSYTGSGKTLAY+LPILSEIGP   + 
Sbjct: 121 SLLDSLEREGFSVPTDVQSAAVPAIIKGHDAVIQSYTGSGKTLAYLLPILSEIGPLAEKS 180

Query: 181 SNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEAL 240
            + + E  K+ EI+A+IVAPSRELGMQIVREVEK+LGP +R++VQQLVGGANR RQEEAL
Sbjct: 181 RSSHSENDKRTEIQAMIVAPSRELGMQIVREVEKLLGPVHRRMVQQLVGGANRMRQEEAL 240

Query: 241 KKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRRP 300
           KKNKPAIVVGTPGRIAEIS  GKLHTHGC FL+LDEVDELLSFNFRED+HRILEHVG+R 
Sbjct: 241 KKNKPAIVVGTPGRIAEISKGGKLHTHGCRFLVLDEVDELLSFNFREDIHRILEHVGKRS 300

Query: 301 GANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKVAPLESVPLSGP 360
           GA  +G  +    RA R+ ++VSATVPFSV+RAAKSW  +P+LV+ANKV PL++V  S P
Sbjct: 301 GAGPKGEVD---ERANRQTILVSATVPFSVIRAAKSWSHEPVLVQANKVTPLDTVQPSAP 360

Query: 361 VNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF 420
           V    P   +T+ +  Q QT I +LPP+LKHYYC S+ QHKVD LRRC+HALDA+ V+ F
Sbjct: 361 VMSLTP---TTSEADGQIQTTIQSLPPALKHYYCISKHQHKVDTLRRCVHALDAQSVIAF 420

Query: 421 MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI 480
           MNH++QL+DVV+KL+ARG+ +AE+HGDLGKL RST LK FKNGE++VLVTNELSARGLD+
Sbjct: 421 MNHSRQLKDVVYKLEARGMNSAEMHGDLGKLGRSTVLKKFKNGEIKVLVTNELSARGLDV 480

Query: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQKQLGVPILAC 540
           AECDLVVNL+LPTD++HYAHRAGRTGRLGR GTVV++CEE +VF+VKK++KQLG+P L C
Sbjct: 481 AECDLVVNLELPTDAVHYAHRAGRTGRLGRKGTVVTVCEESQVFIVKKMEKQLGLPFLYC 540

Query: 541 DFNEGKLVVNEEEK 555
           +F +G+LVV EE+K
Sbjct: 541 EFVDGELVVTEEDK 547

[Close]

BLAST of ClCG00G000290 vs. TAIR10
Match: AT5G60990.1 (AT5G60990.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 167.9 bits (424), Expect = 1.7e-41
Identity = 126/429 (29.37%), Postives = 205/429 (47.79%), Query Frame = 1


Query: 111 KSFSELGLPDSLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPIL 170
           K+F+ELG+ + L++  E  G+  P+ IQ+ ++P  L+  DV+  + TGSGKT A+ +PIL
Sbjct: 9   KTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPIL 68

Query: 171 SEIGPFKNRVSNYNEEPGKKKEIE----AVIVAPSRELGMQIVREVEKILGPANRKVVQQ 230
             +  +      Y+ EP K +  +    A +++P+REL +QI  + E +    + +    
Sbjct: 69  QALLEYV-----YDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAV- 128

Query: 231 LVGGANRSRQEEALKKNKPAIVVGTPGRIAE-ISAAGKLHTHGCSFLILDEVDELLSFNF 290
           LVGG +R +Q  AL K +P ++V TPGR+ + +S           +L+LDE D LL+ +F
Sbjct: 129 LVGGIDRMQQTIALGK-RPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDF 188

Query: 291 REDMHRILEHVGRRPGANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVK 350
            + +++ILE +                   ER+  + SAT+                   
Sbjct: 189 EKSLNQILEEIP-----------------LERKTFLFSATM------------------- 248

Query: 351 ANKVAPLESVPLSGPVNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDML 410
             KV  L+   L  PV +   S  ST          +DTL    K  Y     ++K   L
Sbjct: 249 TKKVRKLQRACLRNPVKIEAASKYST----------VDTL----KQQYRFVAAKYKDCYL 308

Query: 411 RRCIHALDAKFVMVFMNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGEL 470
              +  +     M+F       R +   L++ G  A  + G + +  R   L  FK GE 
Sbjct: 309 VYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKFKAGEC 368

Query: 471 RVLVTNELSARGLDIAECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFV 530
            +LV  ++++RGLDI   D+V+N D+PT+S  Y HR GRT R GR G  +S+  + E+  
Sbjct: 369 NILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQYELEW 380

Query: 531 VKKLQKQLG 535
             +++K +G
Sbjct: 429 YIQIEKLIG 380

[Close]

BLAST of ClCG00G000290 vs. TAIR10
Match: AT1G55150.1 (AT1G55150.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 161.8 bits (408), Expect = 1.2e-39
Identity = 115/413 (27.85%), Postives = 191/413 (46.25%), Query Frame = 1


Query: 101 VETQMAPFAAKSFSELGLPDSLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSG 160
           VE +  P   KSF ++G PD ++E ++  GFT PT IQS   P  +K  D++  + TGSG
Sbjct: 89  VEGKDIPKPVKSFRDVGFPDYVLEEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSG 148

Query: 161 KTLAYVLPILSEIGPFKNRVSNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPAN 220
           KTL+Y+LP +  +      +  + + P        +++AP+REL +QI +E  K  G ++
Sbjct: 149 KTLSYLLPAIVHVNA--QPMLAHGDGP------IVLVLAPTRELAVQIQQEASKF-GSSS 208

Query: 221 RKVVQQLVGGANRSRQEEALKKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDEL 280
           +     + GG  +  Q   L+K    IV+ TPGR+ ++  +   +    ++L+LDE D +
Sbjct: 209 KIKTTCIYGGVPKGPQVRDLQKGVE-IVIATPGRLIDMMESNNTNLRRVTYLVLDEADRM 268

Query: 281 LSFNFREDMHRILEHVGRRPGANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCD 340
           L   F   + +I+ H+                 R +R+ +  SAT P  V + +K +   
Sbjct: 269 LDMGFDPQIRKIVSHI-----------------RPDRQTLYWSATWPKEVEQLSKKF--- 328

Query: 341 PLLVKANKVAPLESVPLSGPVNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQH 400
                           L  P  +   SS   AN  ++    +D +  S K+      L+ 
Sbjct: 329 ----------------LYNPYKVIIGSSDLKANRAIRQI--VDVISESQKYNKLVKLLED 388

Query: 401 KVDMLRRCIHALDAKFVMVFMNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSF 460
            +D  R          ++VF++  K    +  +L+  G  A  +HGD  +  R   L  F
Sbjct: 389 IMDGSR----------ILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEF 443

Query: 461 KNGELRVLVTNELSARGLDIAECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGT 514
           ++G+  ++   +++ARGLD+ +   V+N D P     Y HR GRTGR G  GT
Sbjct: 449 RSGKSPIMTATDVAARGLDVKDVKYVINYDFPGSLEDYVHRIGRTGRAGAKGT 443

[Close]

BLAST of ClCG00G000290 vs. TAIR10
Match: AT3G22330.1 (AT3G22330.1 putative mitochondrial RNA helicase 2)

HSP 1 Score: 157.5 bits (397), Expect = 2.3e-38
Identity = 117/423 (27.66%), Postives = 199/423 (47.04%), Query Frame = 1


Query: 112 SFSELGLPDSLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILS 171
           + SELG+   +++ L S+G      IQ A +   ++  D++ ++ TG+GKTLA+ +PI+ 
Sbjct: 105 AISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPII- 164

Query: 172 EIGPFKNRVSNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGA 231
                 +++  YN + G+ +    +++AP+REL  Q+ +E  +   P+   +   L GG 
Sbjct: 165 ------DKIIKYNAKHGRGRNPLCLVLAPTRELARQVEKEFRES-APSLDTIC--LYGGT 224

Query: 232 NRSRQEEALKKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHR 291
              +Q   L      + VGTPGR+ ++   G L+     F++LDE D++L   F ED+  
Sbjct: 225 PIGQQMRQLDYGVD-VAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEI 284

Query: 292 ILEHVGRRPGANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKVAP 351
           ILE +  +                 R+ +M SAT+P  +    K +  +PL V       
Sbjct: 285 ILEKLPEK-----------------RQSMMFSATMPSWIRSLTKKYLNNPLTV------- 344

Query: 352 LESVPLSGPVNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCIHA 411
                     +L G S    A+       GI T       Y   S +   V       HA
Sbjct: 345 ----------DLVGDSDQKLAD-------GITTYSIIADSYGRASIIGPLVTE-----HA 404

Query: 412 LDAKFVMVFMNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTN 471
              K ++     TK+  D +    AR      LHGD+ +  R  TL  F++G   +LV  
Sbjct: 405 KGGKCIV--FTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGHFNILVAT 464

Query: 472 ELSARGLDIAECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQK 531
           +++ARGLD+   DL+++ +LP ++  + HR GRTGR G+ G+ + I  + +   VK +++
Sbjct: 465 DVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSRAVKIIER 468

Query: 532 QLG 535
           ++G
Sbjct: 525 EVG 468

[Close]

BLAST of ClCG00G000290 vs. TAIR10
Match: AT2G33730.1 (AT2G33730.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 153.3 bits (386), Expect = 4.4e-37
Identity = 121/421 (28.74%), Postives = 187/421 (44.42%), Query Frame = 1


Query: 107 PFAAKSFSELGLPDSLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYV 166
           P   +S+ E  L   L++ +E  G+  P+ IQ A+IP  L++ DV+  + TGSGKT A+V
Sbjct: 309 PRPMRSWEESKLTSELLKAVERAGYKKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFV 368

Query: 167 LPILSEIGPFKNRVSNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQ 226
           LP+L+ I      +S  NE  G      AV++AP+REL  QI  E  K       +V   
Sbjct: 369 LPMLAYISRLPP-MSEENETEGPY----AVVMAPTRELAQQIEEETVKFAHYLGFRVTS- 428

Query: 227 LVGGANRSRQEEALKKNKPA-IVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNF 286
           +VGG  +S +E+ LK  +   IV+ TPGR+ +         + C++++LDE D ++   F
Sbjct: 429 IVGG--QSIEEQGLKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGF 488

Query: 287 REDMHRILEHVGRRPGANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVK 346
              +  +L+ +           E    ++  R   M SAT+P  V R A+ +        
Sbjct: 489 EPQVAGVLDAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKY-------- 548

Query: 347 ANKVAPLESVPLSGPVNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDML 406
                      L  PV +   ++G T +   Q              +    +   K   L
Sbjct: 549 -----------LRNPVVVTIGTAGKTTDLISQ--------------HVIMMKESEKFFRL 608

Query: 407 RRCIHALDAKFVMVFMNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGEL 466
           ++ +  L  K  +VF+N  K    +   L   G     LHG   +  R  +L+ F+    
Sbjct: 609 QKLLDELGEKTAIVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRY 668

Query: 467 RVLVTNELSARGLDIAECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSI--CEEPEV 525
            VLV  ++  RG+DI +   V+N D+P     Y HR GRTGR G+ G   S     + EV
Sbjct: 669 NVLVATDVVGRGIDIPDVAHVINYDMPKHIEMYTHRIGRTGRAGKSGVATSFLTLHDTEV 688

[Close]

BLAST of ClCG00G000290 vs. NCBI nr
Match: gi|659096174|ref|XP_008448960.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial [Cucumis melo])

HSP 1 Score: 1036.9 bits (2680), Expect = 1.2e-299
Identity = 526/555 (94.77%), Postives = 540/555 (97.30%), Query Frame = 1


Query: 1   MNALVPGRLFLFAGESFPFHKLPQVCRSTLFHSGVFCLNKAEINHGPLTLASLGFKSEFQ 60
           MNALVPGRLFLFAGESFPFHKLPQVCRSTLFHSGVFCLNKAE NHGPLTLASLGFKSEFQ
Sbjct: 1   MNALVPGRLFLFAGESFPFHKLPQVCRSTLFHSGVFCLNKAEPNHGPLTLASLGFKSEFQ 60

Query: 61  KTDESKVNKATELDSPWDISKSRVKVVRNNEKKVVGARNLVETQMAPFAAKSFSELGLPD 120
           +TD+SKVNK TELD+P DISKSRVK+VRNNEKKV G R+ VE QMAPFAAKSFSELGL D
Sbjct: 61  ETDKSKVNKVTELDTPRDISKSRVKIVRNNEKKVGGTRSSVEIQMAPFAAKSFSELGLAD 120

Query: 121 SLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKNRV 180
           +LIERLESEGFTVPTDIQSAS+PTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKN V
Sbjct: 121 ALIERLESEGFTVPTDIQSASVPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKNTV 180

Query: 181 SNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEAL 240
           SNYN+EPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRK+VQQLVGGANRSRQEEAL
Sbjct: 181 SNYNDEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKIVQQLVGGANRSRQEEAL 240

Query: 241 KKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRRP 300
           KKNKP+IVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRR 
Sbjct: 241 KKNKPSIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRRS 300

Query: 301 GANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKVAPLESVPLSGP 360
            AN +GSENTQARRAER+LVMVSATVPFSVVRAAKSWGCDPLLVKANKVAPLESVP SGP
Sbjct: 301 SANPRGSENTQARRAERQLVMVSATVPFSVVRAAKSWGCDPLLVKANKVAPLESVPPSGP 360

Query: 361 VNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF 420
           VNLR PSSGST+NSTLQSQT IDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF
Sbjct: 361 VNLRAPSSGSTSNSTLQSQTAIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF 420

Query: 421 MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI 480
           MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI
Sbjct: 421 MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI 480

Query: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQKQLGVPILAC 540
           AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQKQLGVPILAC
Sbjct: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQKQLGVPILAC 540

Query: 541 DFNEGKLVVNEEEKI 556
           DFNEGKLV+NEEEKI
Sbjct: 541 DFNEGKLVLNEEEKI 555

[Close]

BLAST of ClCG00G000290 vs. NCBI nr
Match: gi|449460509|ref|XP_004147988.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial [Cucumis sativus])

HSP 1 Score: 1030.4 bits (2663), Expect = 1.2e-297
Identity = 522/555 (94.05%), Postives = 540/555 (97.30%), Query Frame = 1


Query: 1   MNALVPGRLFLFAGESFPFHKLPQVCRSTLFHSGVFCLNKAEINHGPLTLASLGFKSEFQ 60
           MNALVPGRLFLFAGESFPFHKLPQVCRST FHSGVFCLNKAE+NHGPLTLASLGFKSEFQ
Sbjct: 1   MNALVPGRLFLFAGESFPFHKLPQVCRSTFFHSGVFCLNKAEVNHGPLTLASLGFKSEFQ 60

Query: 61  KTDESKVNKATELDSPWDISKSRVKVVRNNEKKVVGARNLVETQMAPFAAKSFSELGLPD 120
           +TD+S+VNK  ELD+P DISKS+VK+VRNNEKKV GAR+ VE QMAPFAAKSFSELGL D
Sbjct: 61  ETDKSQVNKVAELDTPRDISKSKVKIVRNNEKKVGGARSSVEIQMAPFAAKSFSELGLAD 120

Query: 121 SLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKNRV 180
           +LIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKN +
Sbjct: 121 ALIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKNTI 180

Query: 181 SNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEAL 240
           SNYN+EPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEAL
Sbjct: 181 SNYNDEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEAL 240

Query: 241 KKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRRP 300
           KKNKP+IVVGTPGRIAEISA GKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRR 
Sbjct: 241 KKNKPSIVVGTPGRIAEISATGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRRS 300

Query: 301 GANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKVAPLESVPLSGP 360
           GANS+GSENTQARRAER+LVMVSATVPFSVVRAAKSWG DPLLVKANKVAPLESVP SGP
Sbjct: 301 GANSRGSENTQARRAERQLVMVSATVPFSVVRAAKSWGFDPLLVKANKVAPLESVPPSGP 360

Query: 361 VNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF 420
           VNLR PSSGST++STLQSQT IDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF
Sbjct: 361 VNLRAPSSGSTSDSTLQSQTAIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF 420

Query: 421 MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI 480
           MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI
Sbjct: 421 MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI 480

Query: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQKQLGVPILAC 540
           AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTV+SICEEPEVFVVKKLQKQLGVPILAC
Sbjct: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVLSICEEPEVFVVKKLQKQLGVPILAC 540

Query: 541 DFNEGKLVVNEEEKI 556
           DFNEGKLV+NEEEKI
Sbjct: 541 DFNEGKLVLNEEEKI 555

[Close]

BLAST of ClCG00G000290 vs. NCBI nr
Match: gi|567896162|ref|XP_006440569.1| (hypothetical protein CICLE_v10019528mg [Citrus clementina])

HSP 1 Score: 785.0 bits (2026), Expect = 8.5e-224
Identity = 392/554 (70.76%), Postives = 465/554 (83.94%), Query Frame = 1


Query: 1   MNALVPGRLFLFAGESFPFHKLPQVCRSTLFHSGVFCLNKAEINHGPLTLASLGFKSEFQ 60
           M ALV  RL L  GES P HK   V R    H+GV  L++   +HGPLTLASLG+KSEF+
Sbjct: 1   MPALVSTRLLLLVGESLPLHKFSCVSRMPWCHNGVRFLSQVGQHHGPLTLASLGYKSEFE 60

Query: 61  KTDESKVNKATELDSPWDISKSRVKVVRNNEKKVVGARNLVETQMAPFAAKSFSELGLPD 120
            T+++K NK  +   P +I K++VK VR++  K  G +  +E + APFAA SF ELGLP 
Sbjct: 61  STNKNKSNKPKKHSPPIEIPKAKVKAVRSDGIKAAGVKKSLEIESAPFAANSFLELGLPP 120

Query: 121 SLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKNRV 180
            L+ERLE EGF VPT++QSA+IP+ILK HDVVIQSYTGSGKTLAY+LPILS++GP K++ 
Sbjct: 121 LLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLKDKS 180

Query: 181 SNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEAL 240
           SN N E GKK +IEAVIVAPSRELGMQIVRE++K+LGP+++K VQQLVGGANRSRQEEAL
Sbjct: 181 SNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEAL 240

Query: 241 KKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRRP 300
           +KNKPAIVVGTPGRIAEISAAGKLHTHGC FL+LDE+DELLSFNFRE MHRI+EHVGRR 
Sbjct: 241 RKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRS 300

Query: 301 GANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKVAPLESVPLSGP 360
           GAN +  ++  A RAER+ +MVSATVPFSV+RAA+SWG DPLLV+A  V PLES+P +GP
Sbjct: 301 GANPREPKSALATRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGP 360

Query: 361 VNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF 420
            NL GP SGS++NS LQ++    +LPP+LKHYYC ++LQHKVD LRRC+HALDA+ V+ F
Sbjct: 361 GNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAF 420

Query: 421 MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI 480
           MN+T+QL+D VFKL+ARG+ AAELHGDLGKLARSTTLK FKNGE+RVLVTNELSARGLD+
Sbjct: 421 MNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDV 480

Query: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQKQLGVPILAC 540
           AECDLVVNLDLPTDSIHYAHRAGRTGRLGR GTVVSICEEPEVFVVKK+QKQL VPI AC
Sbjct: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQKQLAVPIQAC 540

Query: 541 DFNEGKLVVNEEEK 555
           +F EG+LV+ +EE+
Sbjct: 541 EFTEGRLVIGKEEE 554

[Close]

BLAST of ClCG00G000290 vs. NCBI nr
Match: gi|568847210|ref|XP_006477431.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial [Citrus sinensis])

HSP 1 Score: 784.3 bits (2024), Expect = 1.4e-223
Identity = 394/554 (71.12%), Postives = 466/554 (84.12%), Query Frame = 1


Query: 1   MNALVPGRLFLFAGESFPFHKLPQVCRSTLFHSGVFCLNKAEINHGPLTLASLGFKSEFQ 60
           M ALV  RL L  GES P HK   V R    H+GV  L++   +HGPLTLASLG+KSEF+
Sbjct: 1   MPALVSTRLLLLVGESLPLHKFSCVSRMPWCHNGVRFLSQVGRHHGPLTLASLGYKSEFE 60

Query: 61  KTDESKVNKATELDSPWDISKSRVKVVRNNEKKVVGARNLVETQMAPFAAKSFSELGLPD 120
            T+++K NK  +  SP +I K++VK VR++  K  G +  +E + APFAA SF ELGLP 
Sbjct: 61  PTNKNKSNKPKK-HSPIEIPKAKVKAVRSDGIKAAGVKKSLEIESAPFAANSFLELGLPP 120

Query: 121 SLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKNRV 180
            L+ERLE EGF VPT++QSA+IP+ILK HDVVIQSYTGSGKTLAY+LPILS++GP K++ 
Sbjct: 121 LLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLKDKS 180

Query: 181 SNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEAL 240
           SN N E GKK +IEAVIVAPSRELGMQIVRE+EK+LGP+++K VQQLVGGANRSRQEEAL
Sbjct: 181 SNGNGESGKKTDIEAVIVAPSRELGMQIVREIEKLLGPSDKKAVQQLVGGANRSRQEEAL 240

Query: 241 KKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRRP 300
           +KNKPAIVVGTPGRIAEISAAGKLHTHGC FL+LDE+DELLSFNFRE MHRI+EHVGRR 
Sbjct: 241 RKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRS 300

Query: 301 GANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKVAPLESVPLSGP 360
           GAN +  ++  A RAER+ +MVSATVPFSV+RAA+SWG DPLLV+A  V PLES+P +GP
Sbjct: 301 GANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGP 360

Query: 361 VNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF 420
            NL GP SGS++NS LQ++    +LPP+LKHYYC ++LQHKVD LRRC+HALDA+ V+ F
Sbjct: 361 GNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAF 420

Query: 421 MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI 480
           MN+T+QL+D VFKL+ARG+ AAELHGDLGKLARSTTLK FKNGE+RVLVTNELSARGLD+
Sbjct: 421 MNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDV 480

Query: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQKQLGVPILAC 540
           AECDLVVNLDLPTDSIHYAHRAGRTGRLGR GTVVSICEEPEVFVVKK+QKQL VPI AC
Sbjct: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQKQLAVPIQAC 540

Query: 541 DFNEGKLVVNEEEK 555
           +F EG+LV+ +EE+
Sbjct: 541 EFTEGRLVIGKEEE 553

[Close]

BLAST of ClCG00G000290 vs. NCBI nr
Match: gi|641844638|gb|KDO63530.1| (hypothetical protein CISIN_1g008602mg [Citrus sinensis])

HSP 1 Score: 782.7 bits (2020), Expect = 4.2e-223
Identity = 393/554 (70.94%), Postives = 466/554 (84.12%), Query Frame = 1


Query: 1   MNALVPGRLFLFAGESFPFHKLPQVCRSTLFHSGVFCLNKAEINHGPLTLASLGFKSEFQ 60
           M ALV  RL L  GES P HK   V R    H+GV  L++   +HGPLTLASLG+KSEF+
Sbjct: 1   MPALVSTRLLLLVGESLPLHKFSCVSRMPWCHNGVRFLSQVGRHHGPLTLASLGYKSEFE 60

Query: 61  KTDESKVNKATELDSPWDISKSRVKVVRNNEKKVVGARNLVETQMAPFAAKSFSELGLPD 120
            T+++K NK  +  SP +I K++VK VR++  K  G +  +E + APFAA SF ELGLP 
Sbjct: 61  PTNKNKSNKPKK-HSPIEIPKAKVKAVRSDGIKAAGVKKSLEIESAPFAANSFLELGLPP 120

Query: 121 SLIERLESEGFTVPTDIQSASIPTILKKHDVVIQSYTGSGKTLAYVLPILSEIGPFKNRV 180
            L+ERLE EGF VPT++QSA+IP+ILK HDVVIQSYTGSGKTLAY+LPILS++GP K++ 
Sbjct: 121 LLLERLEREGFNVPTEVQSAAIPSILKNHDVVIQSYTGSGKTLAYLLPILSKVGPLKDKS 180

Query: 181 SNYNEEPGKKKEIEAVIVAPSRELGMQIVREVEKILGPANRKVVQQLVGGANRSRQEEAL 240
           SN N E GKK +IEAVIVAPSRELGMQIVRE++K+LGP+++K VQQLVGGANRSRQEEAL
Sbjct: 181 SNGNGESGKKTDIEAVIVAPSRELGMQIVREIKKLLGPSDKKAVQQLVGGANRSRQEEAL 240

Query: 241 KKNKPAIVVGTPGRIAEISAAGKLHTHGCSFLILDEVDELLSFNFREDMHRILEHVGRRP 300
           +KNKPAIVVGTPGRIAEISAAGKLHTHGC FL+LDE+DELLSFNFRE MHRI+EHVGRR 
Sbjct: 241 RKNKPAIVVGTPGRIAEISAAGKLHTHGCRFLVLDEIDELLSFNFREAMHRIVEHVGRRS 300

Query: 301 GANSQGSENTQARRAERRLVMVSATVPFSVVRAAKSWGCDPLLVKANKVAPLESVPLSGP 360
           GAN +  ++  A RAER+ +MVSATVPFSV+RAA+SWG DPLLV+A  V PLES+P +GP
Sbjct: 301 GANPREPKSALAMRAERQTIMVSATVPFSVIRAARSWGHDPLLVQAKNVIPLESMPATGP 360

Query: 361 VNLRGPSSGSTANSTLQSQTGIDTLPPSLKHYYCTSRLQHKVDMLRRCIHALDAKFVMVF 420
            NL GP SGS++NS LQ++    +LPP+LKHYYC ++LQHKVD LRRC+HALDA+ V+ F
Sbjct: 361 GNLSGPMSGSSSNSNLQAKQADQSLPPALKHYYCVTKLQHKVDTLRRCVHALDAQTVIAF 420

Query: 421 MNHTKQLRDVVFKLKARGVTAAELHGDLGKLARSTTLKSFKNGELRVLVTNELSARGLDI 480
           MN+T+QL+D VFKL+ARG+ AAELHGDLGKLARSTTLK FKNGE+RVLVTNELSARGLD+
Sbjct: 421 MNNTRQLKDAVFKLEARGMKAAELHGDLGKLARSTTLKKFKNGEVRVLVTNELSARGLDV 480

Query: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRMGTVVSICEEPEVFVVKKLQKQLGVPILAC 540
           AECDLVVNLDLPTDSIHYAHRAGRTGRLGR GTVVSICEEPEVFVVKK+QKQL VPI AC
Sbjct: 481 AECDLVVNLDLPTDSIHYAHRAGRTGRLGRRGTVVSICEEPEVFVVKKMQKQLAVPIQAC 540

Query: 541 DFNEGKLVVNEEEK 555
           +F EG+LV+ +EE+
Sbjct: 541 EFTEGRLVIGKEEE 553

The following BLAST results are available for this feature:

BLAST of ClCG00G000290 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RH47_ARATH	2.7e-190	61.73	DEAD-box ATP-dependent RNA helicase 47, mitochondrial OS=Arabidopsis thaliana GN...	[more]
RH47A_ORYSJ	2.0e-185	60.42	DEAD-box ATP-dependent RNA helicase 47A OS=Oryza sativa subsp. japonica GN=Os02g...	[more]
RH47B_ORYSJ	3.7e-179	59.36	DEAD-box ATP-dependent RNA helicase 47B OS=Oryza sativa subsp. japonica GN=Os03g...	[more]
CSHA_STAHJ	3.7e-46	29.01	DEAD-box ATP-dependent RNA helicase CshA OS=Staphylococcus haemolyticus (strain ...	[more]
CSHA_LACRE	8.3e-46	31.46	ATP-dependent RNA helicase CshA OS=Lactobacillus reuteri GN=cshA PE=3 SV=1	[more]

BLAST of ClCG00G000290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4J1_CUCSA	8.1e-298	94.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G038760 PE=4 SV=1	[more]
V4VLY9_9ROSI	5.9e-224	70.76	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019528mg PE=4 SV=1	[more]
A0A067FBI3_CITSI	2.9e-223	70.94	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g008602mg PE=4 SV=1	[more]
A5AK59_VITVI	1.2e-221	70.58	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_02s0025g04190 PE=4 SV=...	[more]
A0A061G4A4_THECC	4.7e-221	71.27	P-loop containing nucleoside triphosphate hydrolases superfamily protein OS=Theo...	[more]

BLAST of ClCG00G000290 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12770.1	1.5e-191	61.73	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT5G60990.1	1.7e-41	29.37	DEA(D/H)-box RNA helicase family protein	[more]
AT1G55150.1	1.2e-39	27.85	DEA(D/H)-box RNA helicase family protein	[more]
AT3G22330.1	2.3e-38	27.66	putative mitochondrial RNA helicase 2	[more]
AT2G33730.1	4.4e-37	28.74	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]

BLAST of ClCG00G000290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096174\|ref\|XP_008448960.1\|	1.2e-299	94.77	PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial [Cucumis melo]	[more]
gi\|449460509\|ref\|XP_004147988.1\|	1.2e-297	94.05	PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial [Cucumis sativu...	[more]
gi\|567896162\|ref\|XP_006440569.1\|	8.5e-224	70.76	hypothetical protein CICLE_v10019528mg [Citrus clementina]	[more]
gi\|568847210\|ref\|XP_006477431.1\|	1.4e-223	71.12	PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial [Citrus sinensi...	[more]
gi\|641844638\|gb\|KDO63530.1\|	4.2e-223	70.94	hypothetical protein CISIN_1g008602mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C
IPR011545	DEAD/DEAH_box_helicase_dom
IPR014001	Helicase_ATP-bd
IPR014014	RNA_helicase_DEAD_Q_motif
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0009663	plasmodesma organization
biological_process	GO:0010497	plasmodesmata-mediated intercellular transport
biological_process	GO:0010501	RNA secondary structure unwinding
biological_process	GO:0008150	biological_process
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004004	ATP-dependent RNA helicase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG00G000290.1	ClCG00G000290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 403..509 score: 8.1
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 428..509 score: 7.2
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 404..548 score: 17
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 135..330 score: 1.6
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 130..358 score: 6.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROFILE	PS51192	HELICASE_ATP_BIND_1	coord: 142..344 score: 2
IPR014014	RNA helicase, DEAD-box type, Q motif	PROFILE	PS51195	Q_MOTIF	coord: 111..139 score:
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 102..348 score: 1.5E-59coord: 384..544 score: 3.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 194..342 score: 1.44E-51coord: 387..529 score: 1.44
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 60..351 score: 1.7E-287coord: 385..553 score: 1.7E
None	No IPR available	PANTHER	PTHR24031:SF303	DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL	coord: 60..351 score: 1.7E-287coord: 385..553 score: 1.7E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG00G000290	Csa3G038760	Cucumber (Chinese Long) v2	cuwcgB172
ClCG00G000290	MELO3C014025	Melon (DHL92) v3.5.1	mewcgB407
ClCG00G000290	Cla001140	Watermelon (97103) v1	wcgwmB001
ClCG00G000290	Cla97C10G188090	Watermelon (97103) v2	wcgwmbB000
ClCG00G000290	Bhi11G000295	Wax gourd	wcgwgoB000
ClCG00G000290	CSPI03G03490	Wild cucumber (PI 183967)	cpiwcgB175
ClCG00G000290	Cucsa.320110	Cucumber (Gy14) v1	cgywcgB554
ClCG00G000290	CmaCh06G007220	Cucurbita maxima (Rimu)	cmawcgB714
ClCG00G000290	CmoCh06G007450	Cucurbita moschata (Rifu)	cmowcgB718
ClCG00G000290	Lsi07G013860	Bottle gourd (USVL1VR-Ls)	lsiwcgB383
ClCG00G000290	Cp4.1LG08g08000	Cucurbita pepo (Zucchini)	cpewcgB759
ClCG00G000290	MELO3C014025.2	Melon (DHL92) v3.6.1	medwcgB396
ClCG00G000290	Carg21640	Silver-seed gourd	carwcgB0840
ClCG00G000290	CsaV3_3G003560	Cucumber (Chinese Long) v3	cucwcgB179

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
ClCG00G000290	ClCG10G003550	Watermelon (Charleston Gray)	wcgwcgB000

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG00G000290	Cucurbita pepo (Zucchini)	cpewcgB185
ClCG00G000290	Cucumber (Gy14) v2	cgybwcgB159
ClCG00G000290	Silver-seed gourd	carwcgB0014
ClCG00G000290	Cucurbita maxima (Rimu)	cmawcgB276
ClCG00G000290	Cucurbita moschata (Rifu)	cmowcgB268