ClCG00G000270 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG00G000270
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Zinc finger, C3HC4 type (RING finger) family protein LENGTH=381
Location	CG_Chr00 : 356587 .. 362233 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAACCGTATCCCCAACATACAATTCCCGTTTCGCACCACGACGAAATTTCTCTCGTATCGTCATTTTTTTCTCGAATTCTTCCCCCATTTTTAGCCGGAGCTCCAAGGAATCCCTCAGCCGAATGCTTTTCAATTTCTAGCTACCCTTTGTTGTAGATTCAATTTCCCGTTCCAATTTGGCTGTTTCTTGTTCGGAATGAAGCAAGTCAATTCAAGTACTTAGGGTTTGATTCATTGTTTTGGGAATTTCAAATGGCATCTTCAAGGTCCCCGAATGGATCTTCTGATGATATCCTCGATACCTCCCCTTTGATGGGGAATTCGAACCGGTCGCCGGACGATACGCATTCGGGTCGGAGATTTGTGCAGAGGCAAAGTCTACGTCAGGCGGCGAGGTTTCTTAGGCAGGCCAGTAGTCGGAGGACGATGCGTGAGCCGTCTATGTTGGTCCGAGAGACGGCTGCGGAGCAATTGGAGGAGAGGCAGAGTGATTGGGCGTATTCGAAGCCGGTTGTTATTCTTGACATCGTCTGGAATTTCGCTTTTGTTGTTGTTGCTGCTACCGTTTTGGTTCTCAGCCGCAACGAGTCTCCTTCAATGCCTTTGAGACTGTGGATCGTGGGGTATGCGTTTCAATGCATTCTCCATATGGTGTGTGTTTGTGTTGAGTATCGTCGCCGCCGGCAGCTACGATATTCGACCTTCAATTCAATGGACGAGGGAAATTCTGCACGCGGGATTTCGGGTTTGGGCTCGAGGGCAAACTCGAGTCATTATGTATCATTGGCTCAATTGGATGATAACGATAGCAGGTTGGGTTATCTATATGTTCTTACATTAAGATTTATATATGATGTCATCTTTTTCAGGAAGTCTGTTTTATGATTTTTGACATGCAGTAATTTCGTAATTGTTCTGATTGGAATTATAGGGAACCAAAGAAGAGATTGTTTGTTTGATGGAGATGATATGTTTGGTTATATGCACCATGTTCAGTAGAGGACGTAGATACTGAATTTGCTTTTCACTGGGAAATGTTAGACTATTAGGATGATTACATCAGCTGACCTTGTGATCAGCTCAGTTGTATTATCATTAGTGTGATTTGTTGCCTTCTGGTCCAGCTGCACAATTGCTTAGAAAATCGAAATATTAGGTTAACCTTAGTACTTTGCTATCTTGGACGTCAATATATGTCATCATTCTTATCTCCAGACATGAATGGTTAGGAAGGATTAATACAACATAAACCTTTATGCTCTTTACTATTTTCAACAAAGCACCCTTGGTATCGAAGCCTCATAAAGGCTGAAGTCATAGCCTGCTCATTGTTGAAAATGGCTATGTAGTCTCTCTGAATAGAAGTAATATGTGCAGTATGAAGACAACTCATTAGAGCTATCATGTTAGCTGGTTGCTTGTTCTTAATTAATTGTTAGATGGTTTTGTGTTTCTCTTTTGGCTTCGATTTCAAAGACCTTTTGTAATGACTTGAAAGGCAACATTTTATTTTAACGTAGTTGGAAATCCCATTTTTGGTGGGATTTTTGGTGGGTTTGGTTTTTTATAGGTCCCTTGAATAAAAGCAGTTGTTTCTATAATAAAAAAATATCATTAAAGTGTTGGACTGATTTCTAATCAAGTAGTTCATTGTTATTATATTTGTAGTCCAATGTATCATACCATATTGTATGAAAGAGGTGTGAGCAGGAATTTTTCCTCGGCCTATATTTATGAGCTGCACTGTACACAATTTAATGAAGAGAAAGTGCTGAAAGGTTTTTCCTTCATTCTTCTGGTTTCTTTATTTTCGTTTTGGCTGAGCTCAACACAATCAAGGAAATATTCCAAATTCAATTGCATCAATCAGCTCTACCCATCTTCCAATCCAAGCATAACTTACACATACATTACCATCCCAAAAGTCGATGCTCATTCTTTGAATTGTTGAACGAAAAGAAAAGAACTGTACTCAGAATCTTTCACCCATGATAAAGCTTAACAATGGATTTACATCGCAAAATTTGTTGTGATATCACTCTTGCAGATGGTTTGGAGTGGGTAGATTGATGTAACTAGACCCTATCATCCTGCGTTGCTTGATGATTATTGTAATTAAGTGGATATAAAAAGGAGACATAGTCTCAATAAATGACTAAGAGGTCAAGGGTTCAAATTCATGGTGGCCACCTACTTAGGAATTAATTTCCTATGAGTTTCCTTGACACCCAAATGTTGTAGGGTCAGGCGGGTTGGCTCGTTAGATTAGTCGAGGTGCGTAAGCTGGCCGGGACACTCGCGAATGTAAAAAGAGAAAAAAAATTAAGTGAATAAAAGATGTATGGTGTGGCTGAAGTACATTGACTTGTTATGAGCTAGCGCTTTACTCTTCTCTTAGATAGAATGATAGGTAGAATAGTAAATTATAATGTTGCCTGCTCAATTTGGTCTCTATCTAGCATGTCTAAGGAAATACATGCCAAACAAAACTCAGCTAACTATTGACATTGAATAAGTGACCTCAAGATGCTCATGAAATTTTATCTCAAAACTGAAAAGTTGGTTTGAAAGATGCTACAACTTCAAGGCAGGTGTTGGCTATATTGAATTGCCAATATTTTGATAAAACCAAATGCTTTTGTTAAGAAAGAATGAAAGAATACAAGGAGATACAAAATAACCAAGCCCACGAAACATAAAATTCGAAGAGGCTATTTTCCTCATCCAGGCCATGGGGCTCGGCTTTTTTATTCACTTATGAAGGAGTATATGAAACCCAAGGATGTATCCGAAAGCAGATTCCTCCTGACCTAACTTAAAAATTCAAGAATGTGTCTCTGTTTCTATCCATATCAACCCATGGTCTCCCATTCGCAACTCCTTTAGCTTTTTTTGTCATCCAAGCCATGGGGCTCCACACCATAAATTGCTCCAACAACTCTTTTCCACAGATTATCTTCCTTACATATAATCTGCAAAGCTACTTAGTAAGAAGGAAGGGACAAATTTCTTTGTTTTAGAGAGTCAAAACTTAATCTCCCATATTGGGTTGGGAGAGAGGACCGTCACCATCTATTGAAGTGATTTCCATGGGAGTTGTTTCCACTGATCCAAACAATCTCTAATTTGCTTTTCCAGCTTCTCTATTACTTGTTTAGGGACTTTCAGCAAAGAGAAGAAATATTACACTTATCCTAATCTGAAGCTGGCCAGCATTTGTGCAAAAAATGAGATCATTGTTTGTGTATTGTTGGTGAGAGATTTTGACGGTATTCCATCCACCCTAAAGCCCCTCAGGATATTCCTTTCACAGCAGAAATGAATTTCATTGCTGAAGAAGTCCACCAATAATAGTGGAAAGGAAAAGGGACAGGGTCTCTTCGGGAGCTTGCCCACTTGCATTCAGTTCATCAGTTTGGAACATATGGAGGAGGTAACTAGAGATTTAGAAAGAAAATACGTGCTTCCTTTAGGATGGAAATAAAGGAAGCAAACAAGTCATCTTGTTAAATGTTAATCCAGAGAGATCAAATTTTACTGTTCTGATTGAACATTTCTGATCAAATGCTTGAGAAAATTGACTTTTGAAAGTATAGGAATCAATATGGGATGAGTCTCAAATCACAAGGACCAAAATGGTATTGTAATGTAGATTTTTATTTGATTTCTTCACCTATTGAACTTTATGTTTTACTTGTAAAACAAAGAACTTGATCTGAATTGAAGTTCTAAGTTTTGCAAACTTGTTAACTAGCTCTGCCCTTGTTGTAGATGTGGTATTATATTCTTCTCAAAAATCTTATATTATTTTTGTTTGCTATGTTCATTTTTTTTTCCTATTATGCCAGTGTAGCAAAGCACCTTGAATCTGCAAATACCATGTTCTCCTTCATCTGGTGGATTATTGGATTCTATTGGGTATCTGCAGGAGGACAATCTTTAGCACACGTCTCTCCTCTGCTTTACTGGTTTGTGATTACTCCTTTCTTGTATTGGATTTTAAAGCTGATGGATTATGTCGTCAAGATTCTAATCTAGTTATGTGGTTTGAACTGCAGGTTATGTATCATATTCTTGGGTTTTGATGTGTTCTTTGTGGTTTTCTGTGTTGCTTTGGCATGTATCATTGGAATTGCTGTTTGCTGCTGTCTTCCCTGTATCATTGCACTTTTATATGCTGTAGCAGACCAGGTAATTGTACGGTGTTCCTGAATATTTTTTTTATGCTTTCAAATATTATTGTCTTCAATTATCTTGTCTCCTTTTTTGTGATATTTCCACATAATAAGATCCTGTATAAAATTCTGCTTCTTTGTCCATAGTATAACCATTGAAGTAACAATAAGAAAGGAGAGAGACGAGATATATCTCCTTTTCATTATGTGAAATTTTCAAGTATTGGGTTGATAGTCCGGCATTAGAAATGTGTATACGAGAAAGCACATGAGAAAGAGGGTGGGCGGATGTGCTTAGTTAGTTAAGGAGGGCCCACAATTTTGTTACTATATTCTGGGGCTGATCAAGGGGAGTGAGTCAGGGTACTAAAAGGTTGAAAGAGTTAATTAAGGCACGTTTTGGCTTGGATTGGGTGTACTTGGGAGAGGCGGAAAGCTCTAGAATTCTTATCAAAGATTCTGTTATGGAATTCTTCTGCTTTGTGTTAGCTTAAACCCTTCTTGTTTCTCGTAGTTTGTCTTGAGGTTATTCAAGCTTCCTTATAGAATTTAGGAAGCAAGGGGTGGGGTCCCTTATGCTCAATTATTACAAAAGGGAAAAAAAGAAAAGAAAAAAGGAAAAATGAAAAAAAAAGGAAGAAAGAAAAGGAAAGAGAGAGAGAGTGTGTGTAGGACCTTTTGTTTCTTTTCTAGATAGATGGTAGCAAATATAACCTTTCTCCAAAAACAAAACCTAGTTTGTTTACAAGGCCAACTTTACTGGCTTTTGATGCATATAATTACGCATATATTCAGGAAGGTGCAACCAAAGAAGATGTTGAACAGTTGTCAAAATTTAAATTCAGAAAGGTTGACGACGCCGAGAAATTCTCCACTGATGTACAGGAACCTCTTGGTGGGATAATGACCGAGTGTGGTACAGATTCACCCATTGAACGCGCCCTCTCGCAGGAGGATGCGGTATGTATGCCATACCATGATCATATACCAAACCTGCAACTTTGTCAGGCTCTAATTATGTTACAAACTAGAATTGGCTTGATAAGTTCTCATGTCCTTCTTGTCTTTCAGGAGTGTTGCATCTGCCTTTCTGCATATGAGGATGGTGTCGAGCTACGAGAGCTCCCATGTGGTCACCACTTCCACTGTGCCTGCGTCGATAAGTGGCTGTATATTAACGCCACCTGTCCTCTCTGCAAGTACAACATCCTGAAAAATAGCAATCTTGCTCAAGAGGAAGTTTAAATATACTTTTCGATTTACATTTTATGAATGTTTATACAGGTAAGTTGTGTGTAGTTGTGAAAGAGATCAATCAGCAAACTCAGTATAGGGCCCTTTCTTTTGCTGCAGTTGCTATTGTTGTTGTAGTGAATATTATTCTTTGCTGTAGTTCTTGCTCTGCTCAGGTTGCTCGTGTAAATGGCGATATGAAAGGTTCTCTGTAATGGCTAATTCCCAAGGCATTCCC

mRNA sequence

AAAACCGTATCCCCAACATACAATTCCCGTTTCGCACCACGACGAAATTTCTCTCGTATCGTCATTTTTTTCTCGAATTCTTCCCCCATTTTTAGCCGGAGCTCCAAGGAATCCCTCAGCCGAATGCTTTTCAATTTCTAGCTACCCTTTGTTGTAGATTCAATTTCCCGTTCCAATTTGGCTGTTTCTTGTTCGGAATGAAGCAAGTCAATTCAAGTACTTAGGGTTTGATTCATTGTTTTGGGAATTTCAAATGGCATCTTCAAGGTCCCCGAATGGATCTTCTGATGATATCCTCGATACCTCCCCTTTGATGGGGAATTCGAACCGGTCGCCGGACGATACGCATTCGGGTCGGAGATTTGTGCAGAGGCAAAGTCTACGTCAGGCGGCGAGGTTTCTTAGGCAGGCCAGTAGTCGGAGGACGATGCGTGAGCCGTCTATGTTGGTCCGAGAGACGGCTGCGGAGCAATTGGAGGAGAGGCAGAGTGATTGGGCGTATTCGAAGCCGGTTGTTATTCTTGACATCGTCTGGAATTTCGCTTTTGTTGTTGTTGCTGCTACCGTTTTGGTTCTCAGCCGCAACGAGTCTCCTTCAATGCCTTTGAGACTGTGGATCGTGGGGTATGCGTTTCAATGCATTCTCCATATGGTGTGTGTTTGTGTTGAGTATCGTCGCCGCCGGCAGCTACGATATTCGACCTTCAATTCAATGGACGAGGGAAATTCTGCACGCGGGATTTCGGGTTTGGGCTCGAGGGCAAACTCGAGTCATTATGTATCATTGGCTCAATTGGATGATAACGATAGCAGTGTAGCAAAGCACCTTGAATCTGCAAATACCATGTTCTCCTTCATCTGGTGGATTATTGGATTCTATTGGGTATCTGCAGGAGGACAATCTTTAGCACACGTCTCTCCTCTGCTTTACTGGTTATGTATCATATTCTTGGGTTTTGATGTGTTCTTTGTGGTTTTCTGTGTTGCTTTGGCATGTATCATTGGAATTGCTGTTTGCTGCTGTCTTCCCTGTATCATTGCACTTTTATATGCTGTAGCAGACCAGGAAGGTGCAACCAAAGAAGATGTTGAACAGTTGTCAAAATTTAAATTCAGAAAGGTTGACGACGCCGAGAAATTCTCCACTGATGTACAGGAACCTCTTGGTGGGATAATGACCGAGTGTGGTACAGATTCACCCATTGAACGCGCCCTCTCGCAGGAGGATGCGGAGTGTTGCATCTGCCTTTCTGCATATGAGGATGGTGTCGAGCTACGAGAGCTCCCATGTGGTAAGTTGTGTGTAGTTGTGAAAGAGATCAATCAGCAAACTCAGTATAGGGCCCTTTCTTTTGCTGCAGTTGCTATTGTTGTTGTAGTGAATATTATTCTTTGCTGTAGTTCTTGCTCTGCTCAGGTTGCTCGTGTAAATGGCGATATGAAAGGTTCTCTGTAATGGCTAATTCCCAAGGCATTCCC

Coding sequence (CDS)

ATGGCATCTTCAAGGTCCCCGAATGGATCTTCTGATGATATCCTCGATACCTCCCCTTTGATGGGGAATTCGAACCGGTCGCCGGACGATACGCATTCGGGTCGGAGATTTGTGCAGAGGCAAAGTCTACGTCAGGCGGCGAGGTTTCTTAGGCAGGCCAGTAGTCGGAGGACGATGCGTGAGCCGTCTATGTTGGTCCGAGAGACGGCTGCGGAGCAATTGGAGGAGAGGCAGAGTGATTGGGCGTATTCGAAGCCGGTTGTTATTCTTGACATCGTCTGGAATTTCGCTTTTGTTGTTGTTGCTGCTACCGTTTTGGTTCTCAGCCGCAACGAGTCTCCTTCAATGCCTTTGAGACTGTGGATCGTGGGGTATGCGTTTCAATGCATTCTCCATATGGTGTGTGTTTGTGTTGAGTATCGTCGCCGCCGGCAGCTACGATATTCGACCTTCAATTCAATGGACGAGGGAAATTCTGCACGCGGGATTTCGGGTTTGGGCTCGAGGGCAAACTCGAGTCATTATGTATCATTGGCTCAATTGGATGATAACGATAGCAGTGTAGCAAAGCACCTTGAATCTGCAAATACCATGTTCTCCTTCATCTGGTGGATTATTGGATTCTATTGGGTATCTGCAGGAGGACAATCTTTAGCACACGTCTCTCCTCTGCTTTACTGGTTATGTATCATATTCTTGGGTTTTGATGTGTTCTTTGTGGTTTTCTGTGTTGCTTTGGCATGTATCATTGGAATTGCTGTTTGCTGCTGTCTTCCCTGTATCATTGCACTTTTATATGCTGTAGCAGACCAGGAAGGTGCAACCAAAGAAGATGTTGAACAGTTGTCAAAATTTAAATTCAGAAAGGTTGACGACGCCGAGAAATTCTCCACTGATGTACAGGAACCTCTTGGTGGGATAATGACCGAGTGTGGTACAGATTCACCCATTGAACGCGCCCTCTCGCAGGAGGATGCGGAGTGTTGCATCTGCCTTTCTGCATATGAGGATGGTGTCGAGCTACGAGAGCTCCCATGTGGTAAGTTGTGTGTAGTTGTGAAAGAGATCAATCAGCAAACTCAGTATAGGGCCCTTTCTTTTGCTGCAGTTGCTATTGTTGTTGTAGTGAATATTATTCTTTGCTGTAGTTCTTGCTCTGCTCAGGTTGCTCGTGTAAATGGCGATATGAAAGGTTCTCTGTAA

Protein sequence

MASSRSPNGSSDDILDTSPLMGNSNRSPDDTHSGRRFVQRQSLRQAARFLRQASSRRTMREPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPLRLWIVGYAFQCILHMVCVCVEYRRRRQLRYSTFNSMDEGNSARGISGLGSRANSSHYVSLAQLDDNDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVDDAEKFSTDVQEPLGGIMTECGTDSPIERALSQEDAECCICLSAYEDGVELRELPCGKLCVVVKEINQQTQYRALSFAAVAIVVVVNIILCCSSCSAQVARVNGDMKGSL

Homology

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BLAST of ClCG00G000270 vs. Swiss-Prot
Match: RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 2.9e-133
Identity = 243/357 (68.07%), Postives = 272/357 (76.19%), Query Frame = 1


Query: 6   SPNGSSDDILDTSPLMGNSNRSPDDTHSG---RRFVQRQSLRQAARFLRQASSRRTMREP 65
           S + SS D +D +PL+ N + +  +   G   RR V+RQ LR+AARFL +ASS R MREP
Sbjct: 16  SSSSSSSDAIDPAPLLFNGDDNEGNNGGGGGERRSVRRQGLREAARFLSRASSGRVMREP 75

Query: 66  SMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPLRLWI 125
           SMLVRE AAEQLEERQSDWAYSKPVV+LDIVWN AFV VA  +LV+SR E P MPLR+W+
Sbjct: 76  SMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWL 135

Query: 126 VGYAFQCILHMVCVCVEYRRRRQLRY----------STFNSMDEGNSARGISGLGSRANS 185
           +GYA QC+LHMVCVCVEYRRR + R           S  +S    +S+     LGSR NS
Sbjct: 136 LGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNS 195

Query: 186 S-HYVSLAQLDDNDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCII 245
               +SL  LD   SSVAKHLESANTMFSFIWWIIGFYWVSAGGQ LA  SP +YWL I+
Sbjct: 196 GVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIV 255

Query: 246 FLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVD 305
           FLGFDVFFVVFCVALAC+IGIAVCCCLPCIIA+LYAVADQEGA+KED+EQL+KFKFRK+ 
Sbjct: 256 FLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRKLG 315

Query: 306 DAEKFSTD-VQEPLGGIMTECGTDSPIERALSQEDAECCICLSAYEDGVELRELPCG 348
           DA K + D  Q    GIMTECGTDSPIE  L QEDAECCICLSAYEDG ELRELPCG
Sbjct: 316 DANKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCG 372

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BLAST of ClCG00G000270 vs. Swiss-Prot
Match: RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 458.0 bits (1177), Expect = 1.1e-127
Identity = 226/329 (68.69%), Postives = 258/329 (78.42%), Query Frame = 1


Query: 30  DTHSGRRFVQRQSLRQAARFLRQASS-RRTMREPSMLVRETAAEQLEERQSDWAYSKPVV 89
           D   GRR V+RQ LR+AAR LR ASS R  MREPSMLVRE AAEQLEERQSDWAYSKPVV
Sbjct: 16  DGGGGRRSVRRQGLREAARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYSKPVV 75

Query: 90  ILDIVWNFAFVVVAATVLVLSRNESPSMPLRLWIVGYAFQCILHMVCVCVEYRRRRQLRY 149
           +LD VWN AFVVVA  VLVLS +E+P+MPLR+WI+GY  QC++HMVCVCVEYRRR   R 
Sbjct: 76  VLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRR 135

Query: 150 STFNSMDEGNSARGIS------GLG-SRANSSHYVSLAQLDDNDSSVAKHLESANTMFSF 209
              +     +S+   S      GLG SR +   Y+ L QL++ ++S AKHLESANTM SF
Sbjct: 136 RDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMISF 195

Query: 210 IWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCI 269
           IWW+IGFYWVS+GGQ LA  SP LYWLCI+FLGFDVFFVVFCVALAC+IGIAVCCCLPCI
Sbjct: 196 IWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCI 255

Query: 270 IALLYAVADQEGATKEDVEQLSKFKFRKVDDAEKFSTDVQE---PLGGIMTECGTDSPIE 329
           IA+LYAVA+QEGA+KED++QL+KFKFRKV D  K + D ++     GG+MTECGTDSP+E
Sbjct: 256 IAVLYAVAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVE 315

Query: 330 RALSQEDAECCICLSAYEDGVELRELPCG 348
            AL  EDAECCICLSAYED  ELRELPCG
Sbjct: 316 HALPHEDAECCICLSAYEDETELRELPCG 344

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BLAST of ClCG00G000270 vs. Swiss-Prot
Match: RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 456.1 bits (1172), Expect = 4.1e-127
Identity = 230/343 (67.06%), Postives = 268/343 (78.13%), Query Frame = 1


Query: 10  SSDDILDTSPLMG----NSNRSPDDTHSGRRFVQRQSLRQAARFLRQASSRRTMREPSML 69
           +SD I+DT+P +      +    ++++   R  +RQ LR+AARFLR A SRR MREPSML
Sbjct: 28  NSDGIIDTTPFLPPTVTRTISVDEESNPIHRSARRQGLREAARFLRHAGSRRMMREPSML 87

Query: 70  VRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPLRLWIVGY 129
           VRETAAEQLEERQSDWAYSKPVV LDI+WN AFV +   VL+LSR+E P+MPLR+W+VGY
Sbjct: 88  VRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGY 147

Query: 130 AFQCILHMVCVCVEYRRRRQLRYSTFNSMDEGNSARGISGLGSRANSSHYVSLAQLDDND 189
             QC LHM CVCVEYRRRR+ R+      ++G    G SGL + ++S  YVSLAQL+D  
Sbjct: 148 GIQCWLHMACVCVEYRRRRRRRHP-----EDG----GGSGL-TNSSSQQYVSLAQLEDRG 207

Query: 190 --SSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLGFDVFFVVFC 249
             S+ AKHLESANTMFSFIWWIIGFYWVSAGGQ+L+  SP LYWLCIIFLGFDVFFVVFC
Sbjct: 208 ETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFC 267

Query: 250 VALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVDDAEKFSTDVQEP 309
           VALAC+IG+AVCCCLPCIIA+LYAVADQEGA+K D++Q+ KF+F K  + EK S   +  
Sbjct: 268 VALACVIGLAVCCCLPCIIAILYAVADQEGASKNDIDQMPKFRFTKTGNVEKLSGKAR-- 327

Query: 310 LGGIMTECGTDSPIERALSQEDAECCICLSAYEDGVELRELPC 347
             GIMTECGTDSPIER+LS EDAECCICL  YEDGVELRELPC
Sbjct: 328 --GIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPC 356

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BLAST of ClCG00G000270 vs. Swiss-Prot
Match: RIE1_ARATH (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.4e-71
Identity = 145/293 (49.49%), Postives = 173/293 (59.04%), Query Frame = 1


Query: 60  REPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPLR 119
           R PSMLVRETAA  LEER+ DW YSKPVV  DI+WN A V+ +A +LV +  E P+ P+R
Sbjct: 50  RAPSMLVRETAARALEERRIDWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIR 109

Query: 120 LWIVGYAFQCILHMVCVCVEYRRRRQLRYSTFNSMDEGNSARGISGLGSRANSSHYVSLA 179
           +WI  Y  QC+ H+V V  EY RR   R            AR +        +  Y    
Sbjct: 110 VWICVYGLQCLFHVVLVWSEYWRRNSTR-----------RARDLESYDHEDYNIEYDYEQ 169

Query: 180 QLDDNDS--SVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLGFDV 239
             DDN +  S  K  ES NT+ SFIWWIIGFYWV  GG  L   +P LYWL +IFL  DV
Sbjct: 170 DSDDNSTTYSFVKRCESINTVISFIWWIIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDV 229

Query: 240 FFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVDDAEKFS 299
           FF VFCV LAC++GIA+CCCLPCIIALLYAVA  EG ++ ++  L  +KF+     EK  
Sbjct: 230 FFAVFCVVLACLVGIALCCCLPCIIALLYAVAGTEGVSEAELGVLPLYKFKAFHSNEKNI 289

Query: 300 TD----VQEPLGGIMTECGTDSPIERALSQEDAECCICLSAYEDGVELRELPC 347
           T     V  P+ G+          ER L  EDA+CCICLS+YEDG EL  LPC
Sbjct: 290 TGPGKMVPIPINGLCL------ATERTLLAEDADCCICLSSYEDGAELHALPC 325

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BLAST of ClCG00G000270 vs. TrEMBL
Match: A0A0A0L5T7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G038740 PE=4 SV=1)

HSP 1 Score: 665.2 bits (1715), Expect = 4.9e-188
Identity = 327/347 (94.24%), Postives = 336/347 (96.83%), Query Frame = 1


Query: 1   MASSRSPNGSSDDILDTSPLMGNSNRSPDDTHSGRRFVQRQSLRQAARFLRQASSRRTMR 60
           MASSRSPNGSSDDILDTSPLMG  NRS DDTHSGRRFVQRQSLRQAARFLRQAS+RRTMR
Sbjct: 1   MASSRSPNGSSDDILDTSPLMGTPNRSLDDTHSGRRFVQRQSLRQAARFLRQASNRRTMR 60

Query: 61  EPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPLRL 120
           EPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAAT+LVLSRNESPSMPLRL
Sbjct: 61  EPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATILVLSRNESPSMPLRL 120

Query: 121 WIVGYAFQCILHMVCVCVEYRRRRQLRYSTFNSMDEGNSARGISGLGSRANSSHYVSLAQ 180
           WIVGYAFQCILHMVCVCVEYRRRRQLRYS F+SM+EGNSAR ISGLGSRANSSHYVSLAQ
Sbjct: 121 WIVGYAFQCILHMVCVCVEYRRRRQLRYSAFSSMEEGNSARSISGLGSRANSSHYVSLAQ 180

Query: 181 LDDNDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLGFDVFFV 240
           LD+NDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLA  SPLLYWLCIIFLGFDVFFV
Sbjct: 181 LDENDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAQASPLLYWLCIIFLGFDVFFV 240

Query: 241 VFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVDDAEKFSTDV 300
           VFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKV++ EKFSTDV
Sbjct: 241 VFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVENTEKFSTDV 300

Query: 301 QEPLGGIMTECGTDSPIERALSQEDAECCICLSAYEDGVELRELPCG 348
           QEPLGG+M+EC TDSPIER L QEDAECCICLSAYEDGVELRELPCG
Sbjct: 301 QEPLGGVMSECCTDSPIERPLLQEDAECCICLSAYEDGVELRELPCG 347

[Close]

BLAST of ClCG00G000270 vs. TrEMBL
Match: W9SB76_9ROSA (E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_010559 PE=4 SV=1)

HSP 1 Score: 534.3 bits (1375), Expect = 1.3e-148
Identity = 268/349 (76.79%), Postives = 295/349 (84.53%), Query Frame = 1


Query: 1   MASSRSPNGSSDDILDTSPLMGNSNRSPDDTHSGRRFVQRQSLRQAARFLRQASSRRTMR 60
           MAS+RSPN SS+DI+DT+P +G S  S D   + RRFVQRQSLRQAARFLRQASSRR MR
Sbjct: 1   MASARSPNRSSEDIVDTTPFLGGS--SEDGNSASRRFVQRQSLRQAARFLRQASSRRLMR 60

Query: 61  EPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPLRL 120
           EPSMLVRE AAEQLEERQ DWAYSKPVVILD++WNFAFVV AATVLVLS  ESP MPLRL
Sbjct: 61  EPSMLVREAAAEQLEERQGDWAYSKPVVILDVIWNFAFVVAAATVLVLSHRESPEMPLRL 120

Query: 121 WIVGYAFQCILHMVCVCVEYRRRRQLRY-STFNSMDEGNSARGISGLGSRANSSHYVSLA 180
           WIVGYA QC++H+VCVC EYRRRR+ R  S+ N  +EG+     S  G   +S  YVSLA
Sbjct: 121 WIVGYALQCVVHVVCVCAEYRRRRRRRQRSSSNPAEEGSGGSLSSASG---DSGQYVSLA 180

Query: 181 QL-DDNDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLGFDVF 240
           Q+ D+++ SVAKHLESANTMFSFIWWIIGFYWVSAGGQSLA  SP LYWLCIIFLGFDVF
Sbjct: 181 QMNDESNCSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAQASPQLYWLCIIFLGFDVF 240

Query: 241 FVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVDDAEKFST 300
           FVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGA+KED+EQLSKFKF K    EK + 
Sbjct: 241 FVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFSKRCSNEKLAG 300

Query: 301 DVQEPLGGIMTECGTDSPIERALSQEDAECCICLSAYEDGVELRELPCG 348
           D Q P GGIMTECGTDSP+E  LSQEDAECCICL+AY+DGVELR+LPCG
Sbjct: 301 DAQGPCGGIMTECGTDSPVEHVLSQEDAECCICLTAYDDGVELRQLPCG 344

[Close]

BLAST of ClCG00G000270 vs. TrEMBL
Match: A0A0D2R1A7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G208600 PE=4 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 1.0e-145
Identity = 255/339 (75.22%), Postives = 288/339 (84.96%), Query Frame = 1


Query: 10  SSDDILDTSPLMGNSNRSPDDTHSGRRFVQRQSLRQAARFLRQASSRRTMREPSMLVRET 69
           SSDDI DT+P +  ++ + +D  S RR V+RQSLR AARFLR+ASSRR MREPSMLVRET
Sbjct: 11  SSDDITDTTPFLSPTSNASNDDSSTRRTVRRQSLRDAARFLRRASSRRMMREPSMLVRET 70

Query: 70  AAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPLRLWIVGYAFQC 129
           AAEQLEERQSDWAYSKPVV+LDI+WN AFVVVA  VL+LSRNESP MPLRLWI+GYAFQC
Sbjct: 71  AAEQLEERQSDWAYSKPVVVLDIIWNLAFVVVAVGVLILSRNESPDMPLRLWIIGYAFQC 130

Query: 130 ILHMVCVCVEYRRRRQLRYSTFNSMDEGNSARGISGLGSRANSSHYVSLAQL-DDNDSSV 189
            LH+VCVCVEYRRRR+ + + +   + G    G    GSR +S  YVSLAQL DD  SSV
Sbjct: 131 FLHIVCVCVEYRRRRRRQSTEYRPFNAGEE--GALSPGSRVDSEQYVSLAQLEDDGGSSV 190

Query: 190 AKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLGFDVFFVVFCVALAC 249
           AKHLESANTMFSFIWWIIGFYWVS GGQ++A  SP LYWLCIIFLGFDVFFVVFCVALAC
Sbjct: 191 AKHLESANTMFSFIWWIIGFYWVSIGGQAMARSSPQLYWLCIIFLGFDVFFVVFCVALAC 250

Query: 250 IIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVDDAEKFSTDVQEPLGGIM 309
           IIG+AVCCCLPCIIA+LYAVADQEGA KED++QLSKFKF+K+   +K + DVQEP+GGIM
Sbjct: 251 IIGMAVCCCLPCIIAILYAVADQEGALKEDIDQLSKFKFKKIGSDKKSAADVQEPVGGIM 310

Query: 310 TECGTDSPIERALSQEDAECCICLSAYEDGVELRELPCG 348
           TECGTDSP+ER L  +DAECCICLSAYE+GVELRELPCG
Sbjct: 311 TECGTDSPLERVLPMDDAECCICLSAYEEGVELRELPCG 347

[Close]

BLAST of ClCG00G000270 vs. TrEMBL
Match: I1JA47_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G217300 PE=4 SV=2)

HSP 1 Score: 524.2 bits (1349), Expect = 1.4e-145
Identity = 259/352 (73.58%), Postives = 299/352 (84.94%), Query Frame = 1


Query: 1   MASSRSPNGSSDDILDTSPLMGNSNRSPDDTHSGRRFVQRQSLRQAARFLRQASSRRTMR 60
           MA++RS   SS+DI+D++PL+ NS  S D+  SGR F +RQ LRQAARFLR+AS RR MR
Sbjct: 1   MATTRS---SSEDIVDSTPLLANSGGSSDELTSGRGFSRRQRLRQAARFLRRASGRRMMR 60

Query: 61  EPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPLRL 120
           EPSMLVRE AAEQLEERQSDWAYSKPVV+LDIVWNFAFVVVA  VLVLS +E+P MPLRL
Sbjct: 61  EPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNFAFVVVAGAVLVLSASEAPGMPLRL 120

Query: 121 WIVGYAFQCILHMVCVCVEYRRRRQLRYSTFNSMDE--GNSARGISGL---GSRANSSHY 180
           WIVGYA QC+LHMVCVCVEYRRRR+ + +  +S+ +  G+S+  +S     GS + S+ Y
Sbjct: 121 WIVGYAMQCVLHMVCVCVEYRRRRRQQRAAASSVQDRVGSSSGNLSVSSREGSASGSAQY 180

Query: 181 VSLAQLDDNDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLGF 240
           VSL QLDD  +SVAKHLESANTMFSF+WWIIGFYWVSAGGQ+LA  SP LYWLCIIFLGF
Sbjct: 181 VSLGQLDDEGTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLGF 240

Query: 241 DVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVDDAEK 300
           DVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGA+KED+EQLSKFKFR+++  EK
Sbjct: 241 DVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRRIESNEK 300

Query: 301 FSTDVQEPLGGIMTECGTDSPIERALSQEDAECCICLSAYEDGVELRELPCG 348
            +  +Q P+GGIMTEC  DSPIE  L++EDAECCICLS+Y+DGVELRELPCG
Sbjct: 301 LTGTIQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSYDDGVELRELPCG 349

[Close]

BLAST of ClCG00G000270 vs. TrEMBL
Match: V7CM73_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G155000g PE=4 SV=1)

HSP 1 Score: 523.5 bits (1347), Expect = 2.3e-145
Identity = 258/354 (72.88%), Postives = 299/354 (84.46%), Query Frame = 1


Query: 1   MASSRS-PNGSSDDILDTSPLMGNSNRSPDDTHSGRRFVQRQSLRQAARFLRQASSRRTM 60
           MA++RS P+ SS+DI+D++PL+ NS  S  +  +GRRFV+RQ LRQAARFLRQAS RR M
Sbjct: 1   MATTRSSPSPSSEDIVDSTPLLANSGGSSGELTTGRRFVRRQRLRQAARFLRQASGRRMM 60

Query: 61  REPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPLR 120
           REPSMLVRE AAEQLEERQSDWAYSKPVV+LDIVWNFAFV+VA TVLVLS +E+P MPLR
Sbjct: 61  REPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNFAFVIVAGTVLVLSASEAPGMPLR 120

Query: 121 LWIVGYAFQCILHMVCVCVEYRRRRQLRYSTFNSMDE---GNSARGISGLGSRANSS--- 180
           LWI+GYA QCILHMVCVCVEYRRRR+   +T +   +   G+S+  +S     A+SS   
Sbjct: 121 LWILGYALQCILHMVCVCVEYRRRRRSHRATASVSVQDRIGSSSGNLSSSSREASSSGSV 180

Query: 181 HYVSLAQLDDNDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFL 240
            YVSL QLD+  +SVAKHLESANTMFSF+WWIIGFYWVSAGGQ LA  SP LYWLCIIFL
Sbjct: 181 QYVSLEQLDEEGTSVAKHLESANTMFSFVWWIIGFYWVSAGGQELAQESPQLYWLCIIFL 240

Query: 241 GFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVDDA 300
           GFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGA+KED+EQLSKFKFR+++  
Sbjct: 241 GFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFRRIESN 300

Query: 301 EKFSTDVQEPLGGIMTECGTDSPIERALSQEDAECCICLSAYEDGVELRELPCG 348
           EK +  +Q P+GG+MTEC  +SPIE  L++EDAECCICLS+Y+DGVELRELPCG
Sbjct: 301 EKHTGTIQGPVGGVMTECQAESPIEHVLAEEDAECCICLSSYDDGVELRELPCG 354

[Close]

BLAST of ClCG00G000270 vs. TAIR10
Match: AT1G12760.1 (AT1G12760.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 476.5 bits (1225), Expect = 1.6e-134
Identity = 243/357 (68.07%), Postives = 272/357 (76.19%), Query Frame = 1


Query: 6   SPNGSSDDILDTSPLMGNSNRSPDDTHSG---RRFVQRQSLRQAARFLRQASSRRTMREP 65
           S + SS D +D +PL+ N + +  +   G   RR V+RQ LR+AARFL +ASS R MREP
Sbjct: 16  SSSSSSSDAIDPAPLLFNGDDNEGNNGGGGGERRSVRRQGLREAARFLSRASSGRVMREP 75

Query: 66  SMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPLRLWI 125
           SMLVRE AAEQLEERQSDWAYSKPVV+LDIVWN AFV VA  +LV+SR E P MPLR+W+
Sbjct: 76  SMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWL 135

Query: 126 VGYAFQCILHMVCVCVEYRRRRQLRY----------STFNSMDEGNSARGISGLGSRANS 185
           +GYA QC+LHMVCVCVEYRRR + R           S  +S    +S+     LGSR NS
Sbjct: 136 LGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNS 195

Query: 186 S-HYVSLAQLDDNDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCII 245
               +SL  LD   SSVAKHLESANTMFSFIWWIIGFYWVSAGGQ LA  SP +YWL I+
Sbjct: 196 GVQDLSLGHLDTESSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIV 255

Query: 246 FLGFDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVD 305
           FLGFDVFFVVFCVALAC+IGIAVCCCLPCIIA+LYAVADQEGA+KED+EQL+KFKFRK+ 
Sbjct: 256 FLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRKLG 315

Query: 306 DAEKFSTD-VQEPLGGIMTECGTDSPIERALSQEDAECCICLSAYEDGVELRELPCG 348
           DA K + D  Q    GIMTECGTDSPIE  L QEDAECCICLSAYEDG ELRELPCG
Sbjct: 316 DANKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCG 372

[Close]

BLAST of ClCG00G000270 vs. TAIR10
Match: AT1G63170.1 (AT1G63170.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 458.0 bits (1177), Expect = 6.0e-129
Identity = 226/329 (68.69%), Postives = 258/329 (78.42%), Query Frame = 1


Query: 30  DTHSGRRFVQRQSLRQAARFLRQASS-RRTMREPSMLVRETAAEQLEERQSDWAYSKPVV 89
           D   GRR V+RQ LR+AAR LR ASS R  MREPSMLVRE AAEQLEERQSDWAYSKPVV
Sbjct: 16  DGGGGRRSVRRQGLREAARLLRHASSGRMMMREPSMLVREAAAEQLEERQSDWAYSKPVV 75

Query: 90  ILDIVWNFAFVVVAATVLVLSRNESPSMPLRLWIVGYAFQCILHMVCVCVEYRRRRQLRY 149
           +LD VWN AFVVVA  VLVLS +E+P+MPLR+WI+GY  QC++HMVCVCVEYRRR   R 
Sbjct: 76  VLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRR 135

Query: 150 STFNSMDEGNSARGIS------GLG-SRANSSHYVSLAQLDDNDSSVAKHLESANTMFSF 209
              +     +S+   S      GLG SR +   Y+ L QL++ ++S AKHLESANTM SF
Sbjct: 136 RDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMISF 195

Query: 210 IWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCI 269
           IWW+IGFYWVS+GGQ LA  SP LYWLCI+FLGFDVFFVVFCVALAC+IGIAVCCCLPCI
Sbjct: 196 IWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCI 255

Query: 270 IALLYAVADQEGATKEDVEQLSKFKFRKVDDAEKFSTDVQE---PLGGIMTECGTDSPIE 329
           IA+LYAVA+QEGA+KED++QL+KFKFRKV D  K + D ++     GG+MTECGTDSP+E
Sbjct: 256 IAVLYAVAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVE 315

Query: 330 RALSQEDAECCICLSAYEDGVELRELPCG 348
            AL  EDAECCICLSAYED  ELRELPCG
Sbjct: 316 HALPHEDAECCICLSAYEDETELRELPCG 344

[Close]

BLAST of ClCG00G000270 vs. TAIR10
Match: AT4G11680.1 (AT4G11680.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 456.1 bits (1172), Expect = 2.3e-128
Identity = 230/343 (67.06%), Postives = 268/343 (78.13%), Query Frame = 1


Query: 10  SSDDILDTSPLMG----NSNRSPDDTHSGRRFVQRQSLRQAARFLRQASSRRTMREPSML 69
           +SD I+DT+P +      +    ++++   R  +RQ LR+AARFLR A SRR MREPSML
Sbjct: 28  NSDGIIDTTPFLPPTVTRTISVDEESNPIHRSARRQGLREAARFLRHAGSRRMMREPSML 87

Query: 70  VRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPLRLWIVGY 129
           VRETAAEQLEERQSDWAYSKPVV LDI+WN AFV +   VL+LSR+E P+MPLR+W+VGY
Sbjct: 88  VRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGY 147

Query: 130 AFQCILHMVCVCVEYRRRRQLRYSTFNSMDEGNSARGISGLGSRANSSHYVSLAQLDDND 189
             QC LHM CVCVEYRRRR+ R+      ++G    G SGL + ++S  YVSLAQL+D  
Sbjct: 148 GIQCWLHMACVCVEYRRRRRRRHP-----EDG----GGSGL-TNSSSQQYVSLAQLEDRG 207

Query: 190 --SSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLGFDVFFVVFC 249
             S+ AKHLESANTMFSFIWWIIGFYWVSAGGQ+L+  SP LYWLCIIFLGFDVFFVVFC
Sbjct: 208 ETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFC 267

Query: 250 VALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVDDAEKFSTDVQEP 309
           VALAC+IG+AVCCCLPCIIA+LYAVADQEGA+K D++Q+ KF+F K  + EK S   +  
Sbjct: 268 VALACVIGLAVCCCLPCIIAILYAVADQEGASKNDIDQMPKFRFTKTGNVEKLSGKAR-- 327

Query: 310 LGGIMTECGTDSPIERALSQEDAECCICLSAYEDGVELRELPC 347
             GIMTECGTDSPIER+LS EDAECCICL  YEDGVELRELPC
Sbjct: 328 --GIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPC 356

[Close]

BLAST of ClCG00G000270 vs. TAIR10
Match: AT3G61180.1 (AT3G61180.1 RING/U-box superfamily protein)

HSP 1 Score: 372.9 bits (956), Expect = 2.5e-103
Identity = 192/337 (56.97%), Postives = 235/337 (69.73%), Query Frame = 1


Query: 13  DILDTSPLMGNSNRSPDDTHSGRRFVQRQSLRQAA-RFLRQASSRRTM-REPSMLVRETA 72
           D +D SPL+G + R+        R    Q +R AA R LR+AS+RR M REPS+ VRE A
Sbjct: 16  DTMDASPLLGRNRRN--------RPRSSQPIRGAASRLLRRASNRRMMLREPSVRVREVA 75

Query: 73  AEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPLRLWIVGYAFQCI 132
           AEQLEERQS WAYSKP+++LDI+WNF FV+V+  +L  S +E P +PLRLWI+GY  QC+
Sbjct: 76  AEQLEERQSQWAYSKPIIVLDILWNFLFVIVSIAILGFSSDEDPDVPLRLWIIGYNVQCL 135

Query: 133 LHMVCVCVEYRRRRQLRYSTFNSMDEGNSARGISGLGSRANSSHY-VSLAQLDDNDSSVA 192
            H+ CV  EY+RRR       +  D  N     S  GS   S  Y ++    DD+ +S  
Sbjct: 136 FHVGCVIAEYKRRRVANSPPPSGEDSSNHE---SLSGSEDESDGYSINNTDDDDHGTSFT 195

Query: 193 KHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLGFDVFFVVFCVALACI 252
           KHLESANTMFSF+WWIIGFYWV+A  ++LA  SP LYWLC+ FL FDV FVV CVA+A +
Sbjct: 196 KHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVASL 255

Query: 253 IGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVDDAEKFSTDVQEPLGGIMT 312
           IGIAVCCCLPCIIA+LYA+ADQEGA  E++E+L KFKF  V ++EK + +++E  GGIMT
Sbjct: 256 IGIAVCCCLPCIIAILYALADQEGAPDEEIERLLKFKFLTVKNSEKVNGEIRETQGGIMT 315

Query: 313 ECGTDSPIERALSQEDAECCICLSAYEDGVELRELPC 347
              T+S  ER L  EDAEC ICL AYEDGVELRELPC
Sbjct: 316 GLDTESQTERMLLSEDAECSICLCAYEDGVELRELPC 341

[Close]

BLAST of ClCG00G000270 vs. TAIR10
Match: AT1G68070.1 (AT1G68070.1 Zinc finger, C3HC4 type (RING finger) family protein)

HSP 1 Score: 288.9 bits (738), Expect = 4.8e-78
Identity = 160/349 (45.85%), Postives = 215/349 (61.60%), Query Frame = 1


Query: 1   MASSRSPNGSSDDILDTSPLMGNSNRSPDDTHSGRRFVQRQSLRQAARFLRQASSRRTMR 60
           M+S  SP+GS      ++PL+ +   SP          +RQ +   A  L +AS RR   
Sbjct: 1   MSSPESPSGSDS----STPLLRSRQSSP----------RRQPV--IAVLLNRASGRRGA- 60

Query: 61  EPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPLRL 120
             SM+VRETAA++LEER++DW YSKPVV LD++WN AFV+VA  +L++ + E P++P+R+
Sbjct: 61  --SMVVRETAAQELEERRADWGYSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRI 120

Query: 121 WIVGYAFQCILHMVCVCVEYRRRRQLRYSTFNSMDEGNSARGISGLGSRANSSHYVSLAQ 180
           WI GYA QC++H+V V +E+R+R               +AR   G    A +++  S  +
Sbjct: 121 WICGYAIQCLVHVVLVWLEFRKR---------------NARSRPGDLEAAQATNQDSEDE 180

Query: 181 LDDNDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLGFDVFFV 240
            +D      K  ES NT+ SF+WWI+GFYW+ +GG  L   +  LYWL  +FL FDVFF 
Sbjct: 181 DNDERFLSTKTCESMNTIISFVWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFA 240

Query: 241 VFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVDDAEKFSTDV 300
           +FCV LAC+IGIA+CCCLPCIIALLYAVA QEGA++ D+  L K++F  +++ EK     
Sbjct: 241 IFCVVLACLIGIALCCCLPCIIALLYAVAGQEGASEADLSILPKYRFHTMNNDEK----- 300

Query: 301 QEPLGGIMTECGTDSP---IERALSQEDAECCICLSAYEDGVELRELPC 347
           Q   GG M      S     ER L  EDA+CCICLS+YEDG EL  LPC
Sbjct: 301 QSDGGGKMIPVDAASENLGNERVLLPEDADCCICLSSYEDGAELVSLPC 310

[Close]

BLAST of ClCG00G000270 vs. NCBI nr
Match: gi|659096169|ref|XP_008448958.1| (PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cucumis melo])

HSP 1 Score: 670.2 bits (1728), Expect = 2.2e-189
Identity = 331/347 (95.39%), Postives = 337/347 (97.12%), Query Frame = 1


Query: 1   MASSRSPNGSSDDILDTSPLMGNSNRSPDDTHSGRRFVQRQSLRQAARFLRQASSRRTMR 60
           MASSRSPNGSSDDILDTSPLMG  NRS DDTHSGRRFVQRQSLRQAARFLRQASSRRTMR
Sbjct: 1   MASSRSPNGSSDDILDTSPLMGTPNRSLDDTHSGRRFVQRQSLRQAARFLRQASSRRTMR 60

Query: 61  EPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPLRL 120
           EPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAAT+LVLSRNESPSMPLRL
Sbjct: 61  EPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATILVLSRNESPSMPLRL 120

Query: 121 WIVGYAFQCILHMVCVCVEYRRRRQLRYSTFNSMDEGNSARGISGLGSRANSSHYVSLAQ 180
           WIVGYAFQCILHMVCVCVEYRRRRQLRYS FNSMDEGNSAR ISGLGSRANSSHYVSLAQ
Sbjct: 121 WIVGYAFQCILHMVCVCVEYRRRRQLRYSAFNSMDEGNSARAISGLGSRANSSHYVSLAQ 180

Query: 181 LDDNDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLGFDVFFV 240
           LD+NDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLA  SPLLYWLCIIFLGFDVFFV
Sbjct: 181 LDENDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAQASPLLYWLCIIFLGFDVFFV 240

Query: 241 VFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVDDAEKFSTDV 300
           VFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKV++AEKFS+DV
Sbjct: 241 VFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVENAEKFSSDV 300

Query: 301 QEPLGGIMTECGTDSPIERALSQEDAECCICLSAYEDGVELRELPCG 348
           QEPLGGIM+EC TDSPIER L QEDAECCICLSAYEDGVELRELPCG
Sbjct: 301 QEPLGGIMSECCTDSPIERPLLQEDAECCICLSAYEDGVELRELPCG 347

[Close]

BLAST of ClCG00G000270 vs. NCBI nr
Match: gi|778675634|ref|XP_011650439.1| (PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cucumis sativus])

HSP 1 Score: 665.2 bits (1715), Expect = 7.0e-188
Identity = 327/347 (94.24%), Postives = 336/347 (96.83%), Query Frame = 1


Query: 1   MASSRSPNGSSDDILDTSPLMGNSNRSPDDTHSGRRFVQRQSLRQAARFLRQASSRRTMR 60
           MASSRSPNGSSDDILDTSPLMG  NRS DDTHSGRRFVQRQSLRQAARFLRQAS+RRTMR
Sbjct: 1   MASSRSPNGSSDDILDTSPLMGTPNRSLDDTHSGRRFVQRQSLRQAARFLRQASNRRTMR 60

Query: 61  EPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPLRL 120
           EPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAAT+LVLSRNESPSMPLRL
Sbjct: 61  EPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATILVLSRNESPSMPLRL 120

Query: 121 WIVGYAFQCILHMVCVCVEYRRRRQLRYSTFNSMDEGNSARGISGLGSRANSSHYVSLAQ 180
           WIVGYAFQCILHMVCVCVEYRRRRQLRYS F+SM+EGNSAR ISGLGSRANSSHYVSLAQ
Sbjct: 121 WIVGYAFQCILHMVCVCVEYRRRRQLRYSAFSSMEEGNSARSISGLGSRANSSHYVSLAQ 180

Query: 181 LDDNDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLGFDVFFV 240
           LD+NDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLA  SPLLYWLCIIFLGFDVFFV
Sbjct: 181 LDENDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAQASPLLYWLCIIFLGFDVFFV 240

Query: 241 VFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVDDAEKFSTDV 300
           VFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKV++ EKFSTDV
Sbjct: 241 VFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVENTEKFSTDV 300

Query: 301 QEPLGGIMTECGTDSPIERALSQEDAECCICLSAYEDGVELRELPCG 348
           QEPLGG+M+EC TDSPIER L QEDAECCICLSAYEDGVELRELPCG
Sbjct: 301 QEPLGGVMSECCTDSPIERPLLQEDAECCICLSAYEDGVELRELPCG 347

[Close]

BLAST of ClCG00G000270 vs. NCBI nr
Match: gi|1012128356|ref|XP_015964267.1| (PREDICTED: E3 ubiquitin-protein ligase At1g12760 [Arachis duranensis])

HSP 1 Score: 537.7 bits (1384), Expect = 1.7e-149
Identity = 265/353 (75.07%), Postives = 306/353 (86.69%), Query Frame = 1


Query: 1   MASSRSPNGSSDDILDTSPLMGNSNR--SPDDTHSGRRFVQRQSLRQAARFLRQASSRRT 60
           M+++RSP  SS+DI+D++P +GN+    + D+ +SGRRFV+RQSLRQAARFLRQAS RR 
Sbjct: 1   MSNTRSPTRSSEDIVDSTPFLGNTGTGAATDEFNSGRRFVRRQSLRQAARFLRQASGRRM 60

Query: 61  MREPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPL 120
           MREPSM+VRETAAEQLEERQSDWAYSKPVVILD+VWNFAFVVVAATVL LSR ESP MPL
Sbjct: 61  MREPSMVVRETAAEQLEERQSDWAYSKPVVILDMVWNFAFVVVAATVLFLSRKESPEMPL 120

Query: 121 RLWIVGYAFQCILHMVCVCVEYRRRRQLRYSTFNSMDEGNSAR-GISG---LGSRANSSH 180
           RLWI+GYA QC+LHMVCVCVEYRRRR+++ S   S++ G   R G SG     SR  SSH
Sbjct: 121 RLWIIGYAMQCVLHMVCVCVEYRRRRRIQRS--QSLNGGGEERVGSSGNLSSPSREGSSH 180

Query: 181 YVSLAQLDDNDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLG 240
           YV+L QLD++ +SVAKHLESANTMFSFIWWIIGFYWVSAG QSL   SPLLYWLCIIFLG
Sbjct: 181 YVTLGQLDEDSTSVAKHLESANTMFSFIWWIIGFYWVSAGSQSLVEESPLLYWLCIIFLG 240

Query: 241 FDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVDDAE 300
           FDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGA+KED+EQLSK+KFRKV++ E
Sbjct: 241 FDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKYKFRKVENNE 300

Query: 301 KFSTDVQEPLGGIMTECGTDSPIERALSQEDAECCICLSAYEDGVELRELPCG 348
           K + + Q P+GG+MTEC +DSP E  L++EDAECCICLS+Y+DGVELR+LPCG
Sbjct: 301 KLAGNTQGPVGGVMTECRSDSPSEHVLAEEDAECCICLSSYDDGVELRQLPCG 351

[Close]

BLAST of ClCG00G000270 vs. NCBI nr
Match: gi|1021516923|ref|XP_016201965.1| (PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Arachis ipaensis])

HSP 1 Score: 537.0 bits (1382), Expect = 2.9e-149
Identity = 265/353 (75.07%), Postives = 306/353 (86.69%), Query Frame = 1


Query: 1   MASSRSPNGSSDDILDTSPLMGNSNR--SPDDTHSGRRFVQRQSLRQAARFLRQASSRRT 60
           M+++RSP  SS+DI+D++P +GN+    + D+ +SGRRFV+RQSLRQAARFLRQAS RR 
Sbjct: 1   MSNTRSPTRSSEDIVDSTPFLGNTGTGAATDEFNSGRRFVRRQSLRQAARFLRQASGRRM 60

Query: 61  MREPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPL 120
           MREPSM+VRETAAEQLEERQSDWAYSKPVVILD+VWNFAFVVVAATVL LSR ESP MPL
Sbjct: 61  MREPSMVVRETAAEQLEERQSDWAYSKPVVILDMVWNFAFVVVAATVLFLSRKESPEMPL 120

Query: 121 RLWIVGYAFQCILHMVCVCVEYRRRRQLRYSTFNSMDEGNSAR-GISG---LGSRANSSH 180
           RLWI+GYA QC+LHMVCVCVEYRRRR+++ S   S++ G   R G SG     SR  SSH
Sbjct: 121 RLWIIGYAMQCVLHMVCVCVEYRRRRRIQRS--QSLNGGGEERVGSSGNLSSPSREGSSH 180

Query: 181 YVSLAQLDDNDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLG 240
           YV+L QLD++ +SVAKHLESANTMFSFIWWIIGFYWVSAG QSL   SPLLYWLCIIFLG
Sbjct: 181 YVTLGQLDEDSTSVAKHLESANTMFSFIWWIIGFYWVSAGSQSLVEESPLLYWLCIIFLG 240

Query: 241 FDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVDDAE 300
           FDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGA+KED+EQLSK+KFRKV++ E
Sbjct: 241 FDVFFVVFCVALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKYKFRKVENNE 300

Query: 301 KFSTDVQEPLGGIMTECGTDSPIERALSQEDAECCICLSAYEDGVELRELPCG 348
           K + + Q P+GG+MTEC +DSP E  L++EDAECCICLS+Y+DGVELR+LPCG
Sbjct: 301 KLAGNTQGPVGGVMTECRSDSPGEHVLAEEDAECCICLSSYDDGVELRQLPCG 351

[Close]

BLAST of ClCG00G000270 vs. NCBI nr
Match: gi|1009156427|ref|XP_015896241.1| (PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X2 [Ziziphus jujuba])

HSP 1 Score: 537.0 bits (1382), Expect = 2.9e-149
Identity = 262/347 (75.50%), Postives = 294/347 (84.73%), Query Frame = 1


Query: 1   MASSRSPNGSSDDILDTSPLMGNSNRSPDDTHSGRRFVQRQSLRQAARFLRQASSRRTMR 60
           MAS RSPN SSDDI+DT+PL+G+   S D ++SGRR +QR SLRQAARF RQASSRR MR
Sbjct: 1   MASERSPNRSSDDIVDTTPLLGSPAGSSDGSNSGRRSIQRSSLRQAARFFRQASSRRMMR 60

Query: 61  EPSMLVRETAAEQLEERQSDWAYSKPVVILDIVWNFAFVVVAATVLVLSRNESPSMPLRL 120
           EPSM+VRE AAEQLE RQSDWAYSKPVVILDI+WNFAFVVVAATV+VLS  ESP+ PLRL
Sbjct: 61  EPSMVVREAAAEQLESRQSDWAYSKPVVILDIIWNFAFVVVAATVMVLSYYESPNTPLRL 120

Query: 121 WIVGYAFQCILHMVCVCVEYRRRRQLRYSTFNSMDEGNSARGISGLGSRANSSHYVSLAQ 180
           WI+GYA QC+LH+VCVC EY+RR Q R   FN  DEG  + G    G R +S  Y  L Q
Sbjct: 121 WILGYALQCVLHVVCVCFEYKRR-QRRQQGFNLEDEGIGSSGNLSSGGRDDSGQYARLGQ 180

Query: 181 LDDNDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSLAHVSPLLYWLCIIFLGFDVFFV 240
           +D+ ++SVAKHLESANTMFSFIWWIIGFYWVS+GGQ+LAH SP LYWLCIIFLGFDVFFV
Sbjct: 181 VDEENTSVAKHLESANTMFSFIWWIIGFYWVSSGGQALAHESPQLYWLCIIFLGFDVFFV 240

Query: 241 VFCVALACIIGIAVCCCLPCIIALLYAVADQEGATKEDVEQLSKFKFRKVDDAEKFSTDV 300
           VFCVALAC+IGIAVCCCLPCIIALLYAVADQEGA+KE++E+LSKF FRKV + EK   + 
Sbjct: 241 VFCVALACVIGIAVCCCLPCIIALLYAVADQEGASKEEIEKLSKFNFRKVGNNEKRIDET 300

Query: 301 QEPLGGIMTECGTDSPIERALSQEDAECCICLSAYEDGVELRELPCG 348
           Q PLGGIMTECGTDSPIE  L QEDAECCICLSAY+DGVELR+LPCG
Sbjct: 301 QGPLGGIMTECGTDSPIENVLPQEDAECCICLSAYDDGVELRQLPCG 346

The following BLAST results are available for this feature:

BLAST of ClCG00G000270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RING1_ARATH	2.9e-133	68.07	E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana GN=At1g12760 PE=1 ...	[more]
RING2_ARATH	1.1e-127	68.69	E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana GN=At1g63170 PE=2 ...	[more]
RING4_ARATH	4.1e-127	67.06	E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana GN=At4g11680 PE=2 ...	[more]
RIE1_ARATH	2.4e-71	49.49	E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1 PE=2 SV=1	[more]

BLAST of ClCG00G000270 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5T7_CUCSA	4.9e-188	94.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G038740 PE=4 SV=1	[more]
W9SB76_9ROSA	1.3e-148	76.79	E3 ubiquitin-protein ligase OS=Morus notabilis GN=L484_010559 PE=4 SV=1	[more]
A0A0D2R1A7_GOSRA	1.0e-145	75.22	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G208600 PE=4 SV=1	[more]
I1JA47_SOYBN	1.4e-145	73.58	Uncharacterized protein OS=Glycine max GN=GLYMA_01G217300 PE=4 SV=2	[more]
V7CM73_PHAVU	2.3e-145	72.88	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G155000g PE=4 SV=1	[more]

BLAST of ClCG00G000270 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G12760.1	1.6e-134	68.07	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT1G63170.1	6.0e-129	68.69	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT4G11680.1	2.3e-128	67.06	Zinc finger, C3HC4 type (RING finger) family protein	[more]
AT3G61180.1	2.5e-103	56.97	RING/U-box superfamily protein	[more]
AT1G68070.1	4.8e-78	45.85	Zinc finger, C3HC4 type (RING finger) family protein	[more]

BLAST of ClCG00G000270 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659096169\|ref\|XP_008448958.1\|	2.2e-189	95.39	PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cucumis melo]	[more]
gi\|778675634\|ref\|XP_011650439.1\|	7.0e-188	94.24	PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cucumis sativus]	[more]
gi\|1012128356\|ref\|XP_015964267.1\|	1.7e-149	75.07	PREDICTED: E3 ubiquitin-protein ligase At1g12760 [Arachis duranensis]	[more]
gi\|1021516923\|ref\|XP_016201965.1\|	2.9e-149	75.07	PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Arachis ipaensis]	[more]
gi\|1009156427\|ref\|XP_015896241.1\|	2.9e-149	75.50	PREDICTED: E3 ubiquitin-protein ligase At1g12760-like isoform X2 [Ziziphus jujub...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG00G000270.1	ClCG00G000270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 323..349 score: 2.
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 12..295 score: 7.9E-205coord: 323..347 score: 7.9E
None	No IPR available	PANTHER	PTHR14155:SF186	SUBFAMILY NOT NAMED	coord: 12..295 score: 7.9E-205coord: 323..347 score: 7.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG00G000270	Csa3G038740	Cucumber (Chinese Long) v2	cuwcgB172
ClCG00G000270	MELO3C014022	Melon (DHL92) v3.5.1	mewcgB407
ClCG00G000270	Cla001142	Watermelon (97103) v1	wcgwmB001
ClCG00G000270	Cla97C10G188070	Watermelon (97103) v2	wcgwmbB000
ClCG00G000270	Bhi11G000293	Wax gourd	wcgwgoB000
ClCG00G000270	CSPI03G03480	Wild cucumber (PI 183967)	cpiwcgB175
ClCG00G000270	Cucsa.320130	Cucumber (Gy14) v1	cgywcgB554
ClCG00G000270	CmaCh06G007240	Cucurbita maxima (Rimu)	cmawcgB714
ClCG00G000270	CmaCh16G010190	Cucurbita maxima (Rimu)	cmawcgB276
ClCG00G000270	CmoCh16G010580	Cucurbita moschata (Rifu)	cmowcgB268
ClCG00G000270	Lsi07G013840	Bottle gourd (USVL1VR-Ls)	lsiwcgB383
ClCG00G000270	Cp4.1LG14g08390	Cucurbita pepo (Zucchini)	cpewcgB185
ClCG00G000270	Cp4.1LG08g07830	Cucurbita pepo (Zucchini)	cpewcgB759
ClCG00G000270	CsGy3G003460	Cucumber (Gy14) v2	cgybwcgB159
ClCG00G000270	MELO3C014022.2	Melon (DHL92) v3.6.1	medwcgB396
ClCG00G000270	Carg21638	Silver-seed gourd	carwcgB0840
ClCG00G000270	Carg25214	Silver-seed gourd	carwcgB0014
ClCG00G000270	CsaV3_3G003540	Cucumber (Chinese Long) v3	cucwcgB179

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
ClCG00G000270	ClCG10G003530	Watermelon (Charleston Gray)	wcgwcgB000

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG00G000270	Cucurbita moschata (Rifu)	cmowcgB718