Carg27766 (gene) Silver-seed gourd

NameCarg27766
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionGlutamyl-tRNA synthetase
LocationCucurbita_argyrosperma_scaffold_382 : 34585 .. 35805 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTTTCTCTCATCGTTTTCTTTTCTTTATTTCAGGGGGCATCAAAAAACCTCAACCTTATGGAATGGGATAAACTATGGACCATTAATAAAAAGATTATTGATCCTGTGTGTCCCAGGCATACTGCTGTTATAGAAGAACGACGTGTGTTATTTACCCTTGATAATGGTCCAGAGAAACCATTTGTCCGGGTTATACCAAAGCATAAAAAATATGAAGGTGCTGGTGAGAAATCTTCAACTTTCACAAAGAGGATATGGATCGACCAAGTGGATGCACAATGTATCAAGGTGGATGAAGAAATCACCTTAATGGACTGGGGTAATGCAATAGTGAAAGGCATCGAGAAGGACGGAGATGGATTTGTCACACGGTTGTCGGGAATATTGCATCTCGAAGGCTCTGTGAAGACCACAAAGTTGAAGGCCACTTGGCTGCCTGATATAAACGAACTAGTCACCCTCTCACTTATGGAGTACGATTATTTAATCACAAAAAAGAAGGTATGGACCTTTAATATGTGGTATCATATGCACTTTTCTTTATGGTGGATGTGAGTCTATTTCTATGCTTTGATTGTGATTTTATAGCCTCTTTCCTGTTGGTTTTGAATCAAAGTTCTAAACCATGCATGCTGCTGACATCAGTGTATTTGCATGGACACTTTTGTGTTATTATTTCTGTCTTCTATTTTTAAAAGCCAGATAGCAATAAGCATCACTTAGGTAAGCCAGTTTGTCGAAGTATGGATAATGTTCAGTACTAATGTAAAATGGTTCGAATGTTCCGAAGGTTTATGAAATTAGATGTTAACTGAGCTGCCTTGCATGGGTTAGAAGTTGTTGGTGAACCTTTTCATACGATGAATGTGCTTATGACTGTAACAATTTGTGGGCTGCGGCTTTTTGTTGCTTATTTCATGTTAAGAAAGTGGGTTATAGAAATTATGGATTTTAGGCTCTTTTAAATTACTATTGCAGCTCGAAGAAGGAGAGGATTTTCTTGATGTATTAAATCCATGCACAAAAAAGGAGACCATTGCTGTTGGGGATTCAAACATGCGAAATATAAAGCGTGGAGACATATTGCAGTTGGAGAGGAAGGGGTATTTCAGATGCGATGTTCCATATGTCAGGCCATCGAAACCGATAGTCCTACTCGCAATCCCAGATGGCAGGCAACAATCATGTTCGAAGTAAAAAATCTCTCTAGCAATT

mRNA sequence

ATGAAAGTTTCTCTCATCGTTTTCTTTTCTTTATTTCAGGGGGCATCAAAAAACCTCAACCTTATGGAATGGGATAAACTATGGACCATTAATAAAAAGATTATTGATCCTGTGTGTCCCAGGCATACTGCTGTTATAGAAGAACGACGTGTGTTATTTACCCTTGATAATGGTCCAGAGAAACCATTTGTCCGGGTTATACCAAAGCATAAAAAATATGAAGGTGCTGGTGAGAAATCTTCAACTTTCACAAAGAGGATATGGATCGACCAAGTGGATGCACAATGTATCAAGGTGGATGAAGAAATCACCTTAATGGACTGGGGTAATGCAATAGTGAAAGGCATCGAGAAGGACGGAGATGGATTTGTCACACGGTTGTCGGGAATATTGCATCTCGAAGGCTCTGTGAAGACCACAAAGTTGAAGGCCACTTGGCTGCCTGATATAAACGAACTAGTCACCCTCTCACTTATGGAGTACGATTATTTAATCACAAAAAAGAAGCTCGAAGAAGGAGAGGATTTTCTTGATGTATTAAATCCATGCACAAAAAAGGAGACCATTGCTGTTGGGGATTCAAACATGCGAAATATAAAGCGTGGAGACATATTGCAGTTGGAGAGGAAGGGGTATTTCAGATGCGATGTTCCATATGTCAGGCCATCGAAACCGATAGTCCTACTCGCAATCCCAGATGGCAGGCAACAATCATGTTCGAAGTAAAAAATCTCTCTAGCAATT

Coding sequence (CDS)

ATGAAAGTTTCTCTCATCGTTTTCTTTTCTTTATTTCAGGGGGCATCAAAAAACCTCAACCTTATGGAATGGGATAAACTATGGACCATTAATAAAAAGATTATTGATCCTGTGTGTCCCAGGCATACTGCTGTTATAGAAGAACGACGTGTGTTATTTACCCTTGATAATGGTCCAGAGAAACCATTTGTCCGGGTTATACCAAAGCATAAAAAATATGAAGGTGCTGGTGAGAAATCTTCAACTTTCACAAAGAGGATATGGATCGACCAAGTGGATGCACAATGTATCAAGGTGGATGAAGAAATCACCTTAATGGACTGGGGTAATGCAATAGTGAAAGGCATCGAGAAGGACGGAGATGGATTTGTCACACGGTTGTCGGGAATATTGCATCTCGAAGGCTCTGTGAAGACCACAAAGTTGAAGGCCACTTGGCTGCCTGATATAAACGAACTAGTCACCCTCTCACTTATGGAGTACGATTATTTAATCACAAAAAAGAAGCTCGAAGAAGGAGAGGATTTTCTTGATGTATTAAATCCATGCACAAAAAAGGAGACCATTGCTGTTGGGGATTCAAACATGCGAAATATAAAGCGTGGAGACATATTGCAGTTGGAGAGGAAGGGGTATTTCAGATGCGATGTTCCATATGTCAGGCCATCGAAACCGATAGTCCTACTCGCAATCCCAGATGGCAGGCAACAATCATGTTCGAAGTAA

Protein sequence

MKVSLIVFFSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPEKPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDGDGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVLNPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGRQQSCSK
BLAST of Carg27766 vs. NCBI nr
Match: XP_022961381.1 (glutamate--tRNA ligase, cytoplasmic-like [Cucurbita moschata] >XP_022961382.1 glutamate--tRNA ligase, cytoplasmic-like [Cucurbita moschata] >XP_022961383.1 glutamate--tRNA ligase, cytoplasmic-like [Cucurbita moschata])

HSP 1 Score: 480.7 bits (1236), Expect = 2.9e-132
Identity = 232/241 (96.27%), Postives = 236/241 (97.93%), Query Frame = 0

Query: 1   MKVSLIVFFSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 60
           +KV  ++ F L QGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE
Sbjct: 492 LKVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 551

Query: 61  KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG 120
           KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAI+KGIEKDG
Sbjct: 552 KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAILKGIEKDG 611

Query: 121 DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL 180
           DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL
Sbjct: 612 DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL 671

Query: 181 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGRQQSCS 240
           NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGRQQSCS
Sbjct: 672 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGRQQSCS 731

Query: 241 K 242
           K
Sbjct: 732 K 732

BLAST of Carg27766 vs. NCBI nr
Match: XP_023521072.1 (glutamate--tRNA ligase, cytoplasmic-like [Cucurbita pepo subsp. pepo] >XP_023521073.1 glutamate--tRNA ligase, cytoplasmic-like [Cucurbita pepo subsp. pepo] >XP_023521074.1 glutamate--tRNA ligase, cytoplasmic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 478.0 bits (1229), Expect = 1.9e-131
Identity = 231/241 (95.85%), Postives = 235/241 (97.51%), Query Frame = 0

Query: 1   MKVSLIVFFSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 60
           +KV  ++ F L QGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE
Sbjct: 492 LKVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 551

Query: 61  KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG 120
           KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVK IEKDG
Sbjct: 552 KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKCIEKDG 611

Query: 121 DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL 180
           DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL
Sbjct: 612 DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL 671

Query: 181 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGRQQSCS 240
           NPCTKKET+AVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGRQQSCS
Sbjct: 672 NPCTKKETVAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGRQQSCS 731

Query: 241 K 242
           K
Sbjct: 732 K 732

BLAST of Carg27766 vs. NCBI nr
Match: XP_022968862.1 (glutamate--tRNA ligase, cytoplasmic-like [Cucurbita maxima] >XP_022968864.1 glutamate--tRNA ligase, cytoplasmic-like [Cucurbita maxima] >XP_022968865.1 glutamate--tRNA ligase, cytoplasmic-like [Cucurbita maxima])

HSP 1 Score: 477.6 bits (1228), Expect = 2.4e-131
Identity = 228/241 (94.61%), Postives = 236/241 (97.93%), Query Frame = 0

Query: 1   MKVSLIVFFSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 60
           +KV  ++ F L QGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE
Sbjct: 492 LKVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 551

Query: 61  KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG 120
           KPF+RV+PKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG
Sbjct: 552 KPFIRVLPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG 611

Query: 121 DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL 180
           DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL
Sbjct: 612 DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL 671

Query: 181 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGRQQSCS 240
           NPCTKKET+AVGDSN+RNIKRGDILQLERKGYFRCDVPYVRP+KPIVLLAIPDGRQQSCS
Sbjct: 672 NPCTKKETVAVGDSNIRNIKRGDILQLERKGYFRCDVPYVRPAKPIVLLAIPDGRQQSCS 731

Query: 241 K 242
           K
Sbjct: 732 K 732

BLAST of Carg27766 vs. NCBI nr
Match: XP_022157609.1 (glutamate--tRNA ligase, cytoplasmic [Momordica charantia])

HSP 1 Score: 464.9 bits (1195), Expect = 1.6e-127
Identity = 220/241 (91.29%), Postives = 233/241 (96.68%), Query Frame = 0

Query: 1   MKVSLIVFFSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 60
           +KV  ++ F L QGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIE+RRVLFTLDNGP+
Sbjct: 493 LKVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEDRRVLFTLDNGPD 552

Query: 61  KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG 120
           KPF+RVIP+HKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKD 
Sbjct: 553 KPFIRVIPRHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDQ 612

Query: 121 DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL 180
           DG+VT+LSGILHLEGSVKTTKLKATWLPDINELVTLSLME+DYLITKKKLEEGEDFLDVL
Sbjct: 613 DGYVTKLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEFDYLITKKKLEEGEDFLDVL 672

Query: 181 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGRQQSCS 240
           NPCTKKE++AVGDSNMRN+KRGDILQLERKGYFRCDVPYVRPSKPIVL AIPDGRQQSC 
Sbjct: 673 NPCTKKESVAVGDSNMRNLKRGDILQLERKGYFRCDVPYVRPSKPIVLFAIPDGRQQSCM 732

Query: 241 K 242
           K
Sbjct: 733 K 733

BLAST of Carg27766 vs. NCBI nr
Match: XP_008450490.1 (PREDICTED: glutamate--tRNA ligase, cytoplasmic [Cucumis melo])

HSP 1 Score: 455.3 bits (1170), Expect = 1.3e-124
Identity = 219/241 (90.87%), Postives = 228/241 (94.61%), Query Frame = 0

Query: 1   MKVSLIVFFSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 60
           +KV  ++ F L QGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTL NGPE
Sbjct: 490 LKVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLGNGPE 549

Query: 61  KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG 120
            P+VR+IPKHKKYEGAGEKS+TFTKRIWIDQ+DAQCIKVDEEITLMDWGNAIVKGI+KD 
Sbjct: 550 IPYVRIIPKHKKYEGAGEKSTTFTKRIWIDQIDAQCIKVDEEITLMDWGNAIVKGIQKDQ 609

Query: 121 DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL 180
           DGFVT+LSGILHLEGSVKTTKLK TWLPDI ELVTLSLMEYDYLITKKKLEEGEDFLDVL
Sbjct: 610 DGFVTQLSGILHLEGSVKTTKLKITWLPDIKELVTLSLMEYDYLITKKKLEEGEDFLDVL 669

Query: 181 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGRQQSCS 240
           NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVL AIPDGRQQS  
Sbjct: 670 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLFAIPDGRQQSSL 729

Query: 241 K 242
           K
Sbjct: 730 K 730

BLAST of Carg27766 vs. TAIR10
Match: AT5G26710.1 (Glutamyl/glutaminyl-tRNA synthetase, class Ic)

HSP 1 Score: 368.2 bits (944), Expect = 3.8e-102
Identity = 169/235 (71.91%), Postives = 205/235 (87.23%), Query Frame = 0

Query: 1   MKVSLIVFFSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 60
           +K+  ++ F L QGASKNLNLMEWDKLW+INK+IIDPVCPRHTAV+ ERRVLFTL +GP+
Sbjct: 482 LKIEALIQFILEQGASKNLNLMEWDKLWSINKRIIDPVCPRHTAVVAERRVLFTLTDGPD 541

Query: 61  KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG 120
           +PFVR+IPKHKK+EGAGEK++TFTK IW+++ DA  I V EE+TLMDWGNAIVK I KD 
Sbjct: 542 EPFVRMIPKHKKFEGAGEKATTFTKSIWLEEADASAISVGEEVTLMDWGNAIVKEITKDE 601

Query: 121 DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL 180
           +G VT LSG+L+L+GSVKTTKLK TWLPD NELV L+L E+DYLITKKKLE+ ++  D +
Sbjct: 602 EGRVTALSGVLNLQGSVKTTKLKLTWLPDTNELVNLTLTEFDYLITKKKLEDDDEVADFV 661

Query: 181 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGR 236
           NP TKKET+A+GDSNMRN+K GD++QLERKGYFRCDVP+V+ SKPIVL +IPDGR
Sbjct: 662 NPNTKKETLALGDSNMRNLKCGDVIQLERKGYFRCDVPFVKSSKPIVLFSIPDGR 716

BLAST of Carg27766 vs. Swiss-Prot
Match: sp|O82462|SYEC_ARATH (Glutamate--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At5g26710 PE=1 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 6.8e-101
Identity = 169/235 (71.91%), Postives = 205/235 (87.23%), Query Frame = 0

Query: 1   MKVSLIVFFSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 60
           +K+  ++ F L QGASKNLNLMEWDKLW+INK+IIDPVCPRHTAV+ ERRVLFTL +GP+
Sbjct: 482 LKIEALIQFILEQGASKNLNLMEWDKLWSINKRIIDPVCPRHTAVVAERRVLFTLTDGPD 541

Query: 61  KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG 120
           +PFVR+IPKHKK+EGAGEK++TFTK IW+++ DA  I V EE+TLMDWGNAIVK I KD 
Sbjct: 542 EPFVRMIPKHKKFEGAGEKATTFTKSIWLEEADASAISVGEEVTLMDWGNAIVKEITKDE 601

Query: 121 DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL 180
           +G VT LSG+L+L+GSVKTTKLK TWLPD NELV L+L E+DYLITKKKLE+ ++  D +
Sbjct: 602 EGRVTALSGVLNLQGSVKTTKLKLTWLPDTNELVNLTLTEFDYLITKKKLEDDDEVADFV 661

Query: 181 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGR 236
           NP TKKET+A+GDSNMRN+K GD++QLERKGYFRCDVP+V+ SKPIVL +IPDGR
Sbjct: 662 NPNTKKETLALGDSNMRNLKCGDVIQLERKGYFRCDVPFVKSSKPIVLFSIPDGR 716

BLAST of Carg27766 vs. Swiss-Prot
Match: sp|O13775|SYEC_SCHPO (Probable glutamate--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gus1 PE=1 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.9e-57
Identity = 110/235 (46.81%), Postives = 144/235 (61.28%), Query Frame = 0

Query: 1   MKVSLIVFFSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 60
           M +  +  + + QG SKN+  ++W   W  NKKIIDPV PRHTAV     V  T+ NGP 
Sbjct: 475 MTIEALQQYIVSQGPSKNILTLDWTSFWATNKKIIDPVAPRHTAVESGDVVKATIVNGPA 534

Query: 61  KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG 120
            P+    P+HKK    G K S F   I I+Q DAQ  K DEE+TLMDWGNA V+ I +D 
Sbjct: 535 APYAEDRPRHKKNPELGNKKSIFANEILIEQADAQSFKQDEEVTLMDWGNAYVREINRDA 594

Query: 121 DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL 180
            G VT L   LHL+G  K T+ K TWL D  +   + L+++DYLITK KLEEGE++ D L
Sbjct: 595 SGKVTSLKLELHLDGDFKKTEKKVTWLADTEDKTPVDLVDFDYLITKDKLEEGENYKDFL 654

Query: 181 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGR 236
            P T+  +    D  ++N+K+GDI+Q+ERKGY+  DVP+       VL  IPDG+
Sbjct: 655 TPQTEFHSPVFADVGIKNLKKGDIIQVERKGYYIVDVPF--DGTQAVLFNIPDGK 707

BLAST of Carg27766 vs. Swiss-Prot
Match: sp|P46655|SYEC_YEAST (Glutamate--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GUS1 PE=1 SV=3)

HSP 1 Score: 208.4 bits (529), Expect = 9.0e-53
Identity = 102/227 (44.93%), Postives = 144/227 (63.44%), Query Frame = 0

Query: 9   FSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPEKPFVRVIP 68
           F L QG S+N+  +EW+ +W  NKK+IDP+ PRHTA++   ++       P++P + + P
Sbjct: 479 FVLSQGPSRNVINLEWNLIWAFNKKVIDPIAPRHTAIVNPVKIHLEGSEAPQEPKIEMKP 538

Query: 69  KHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDGDGFVTRLS 128
           KHKK    GEK   + K I +D+ DA  I VDEE+TLMDWGN I+   +K+ DG    + 
Sbjct: 539 KHKKNPAVGEKKVIYYKDIVVDKDDADVINVDEEVTLMDWGNVII--TKKNDDG---SMV 598

Query: 129 GILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVLNPCTKKET 188
             L+LEG  K TK K TWL D  ++V + L+++D+LITK +LEE E F D L P T+  T
Sbjct: 599 AKLNLEGDFKKTKHKLTWLADTKDVVPVDLVDFDHLITKDRLEEDESFEDFLTPQTEFHT 658

Query: 189 IAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGR 236
            A+ D N++++K GDI+Q ERKGY+R D    +  KP V   IPDG+
Sbjct: 659 DAIADLNVKDMKIGDIIQFERKGYYRLDA-LPKDGKPYVFFTIPDGK 699

BLAST of Carg27766 vs. Swiss-Prot
Match: sp|Q54KB8|SYEC_DICDI (Probable glutamate--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum OX=44689 GN=gluS PE=2 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.5e-43
Identity = 95/235 (40.43%), Postives = 138/235 (58.72%), Query Frame = 0

Query: 1   MKVSLIVFFSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 60
           + V+ +  F L QGAS     ++  KL+  NK +++P CPR+TA+ +   V FTL NGP 
Sbjct: 494 LTVAALKEFILSQGASAANTTLDLGKLFVGNKAVLEPTCPRYTAIAKATAVKFTLSNGPT 553

Query: 61  KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG 120
            P V+   K+ K    G K  TF+  + ++  D   IK  EE+TLM+WGNAIV+ ++++ 
Sbjct: 554 LPEVKDCLKYAKDPSMGTKKVTFSNNLLLEGDDCNQIKEGEEVTLMNWGNAIVETLQRNE 613

Query: 121 DGFVTRLSGILHLEGSVKTTKLKATWL-PDINELVTLSLMEYDYLITKKKLEEGEDFLDV 180
           +G V  ++G LHLEG VK T  K +WL  D  + VT+ L +YDY+ITK KLE+G+D    
Sbjct: 614 NGDVVSMTGKLHLEGDVKKTDKKLSWLSSDCADTVTVVLQDYDYIITKPKLEDGDDLDTF 673

Query: 181 LNPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDG 235
            N  +K E  A  D N+  +K  D +Q ER+G+F  D       KP +L+ IP G
Sbjct: 674 TNKNSKFEIEAFTDENILTLKLNDKIQFERRGFFNVD-QVGDGVKPYILIYIPSG 727

BLAST of Carg27766 vs. Swiss-Prot
Match: sp|P28668|SYEP_DROME (Bifunctional glutamate/proline--tRNA ligase OS=Drosophila melanogaster OX=7227 GN=GluProRS PE=1 SV=2)

HSP 1 Score: 170.6 bits (431), Expect = 2.1e-41
Identity = 89/243 (36.63%), Postives = 137/243 (56.38%), Query Frame = 0

Query: 1   MKVSLIVFFSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 60
           M V  +  F + QG+SK++  M WDK+W  NKK+IDP+ PR+TA+ +E+RV+  +     
Sbjct: 472 MTVEGLKEFIIAQGSSKSVVFMNWDKIWAFNKKVIDPIAPRYTALEKEKRVIVNVAGAKV 531

Query: 61  KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG 120
           +     +  H K E  G+K+     RI+ID VDA+ +K  E  T ++WGN +++ + KD 
Sbjct: 532 ERI--QVSVHPKDESLGKKTVLLGPRIYIDYVDAEALKEGENATFINWGNILIRKVNKDA 591

Query: 121 DGFVTRLSGILHLEGSVKTTKLKATWL---PDINELVTLSLMEYDYLITKKKLEEGEDFL 180
            G +T +   L+LE       LK TWL    D +       + +D +I+K  L + EDF 
Sbjct: 592 SGNITSVDAALNLENKDFKKTLKLTWLAVEDDPSAYPPTFCVYFDNIISKAVLGKDEDFK 651

Query: 181 DVLNPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPS------KPIVLLAI 235
             +   T+ E   +GD  ++  K+GDI+QL+R+G+F+ DV Y  PS       PIVL +I
Sbjct: 652 QFIGHKTRDEVPMLGDPELKKCKKGDIIQLQRRGFFKVDVAYAPPSGYTNVPSPIVLFSI 711

BLAST of Carg27766 vs. TrEMBL
Match: tr|A0A1S3BPD2|A0A1S3BPD2_CUCME (glutamate--tRNA ligase, cytoplasmic OS=Cucumis melo OX=3656 GN=LOC103492081 PE=3 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 8.6e-125
Identity = 219/241 (90.87%), Postives = 228/241 (94.61%), Query Frame = 0

Query: 1   MKVSLIVFFSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 60
           +KV  ++ F L QGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTL NGPE
Sbjct: 490 LKVEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLGNGPE 549

Query: 61  KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG 120
            P+VR+IPKHKKYEGAGEKS+TFTKRIWIDQ+DAQCIKVDEEITLMDWGNAIVKGI+KD 
Sbjct: 550 IPYVRIIPKHKKYEGAGEKSTTFTKRIWIDQIDAQCIKVDEEITLMDWGNAIVKGIQKDQ 609

Query: 121 DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL 180
           DGFVT+LSGILHLEGSVKTTKLK TWLPDI ELVTLSLMEYDYLITKKKLEEGEDFLDVL
Sbjct: 610 DGFVTQLSGILHLEGSVKTTKLKITWLPDIKELVTLSLMEYDYLITKKKLEEGEDFLDVL 669

Query: 181 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGRQQSCS 240
           NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVL AIPDGRQQS  
Sbjct: 670 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLFAIPDGRQQSSL 729

Query: 241 K 242
           K
Sbjct: 730 K 730

BLAST of Carg27766 vs. TrEMBL
Match: tr|A0A0A0LYW4|A0A0A0LYW4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G561380 PE=3 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 2.1e-123
Identity = 217/241 (90.04%), Postives = 226/241 (93.78%), Query Frame = 0

Query: 1   MKVSLIVFFSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 60
           +K+  ++ F L QGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTL NGPE
Sbjct: 489 LKIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLGNGPE 548

Query: 61  KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG 120
            PFVR+IPKHKKYEGAGEKS+TFTKRIWIDQ DAQCI+VDEEITLMDWGNAIVKGIEKD 
Sbjct: 549 IPFVRIIPKHKKYEGAGEKSTTFTKRIWIDQSDAQCIEVDEEITLMDWGNAIVKGIEKDQ 608

Query: 121 DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL 180
           DGFV +LSGILHLEGSVKTTKLK TWLP+I ELVTLSLMEYDYLITKKKLEEGEDFLDVL
Sbjct: 609 DGFVKQLSGILHLEGSVKTTKLKITWLPEIKELVTLSLMEYDYLITKKKLEEGEDFLDVL 668

Query: 181 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGRQQSCS 240
           NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVR SKPIVL AIPDGRQQSC 
Sbjct: 669 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRSSKPIVLFAIPDGRQQSCL 728

Query: 241 K 242
           K
Sbjct: 729 K 729

BLAST of Carg27766 vs. TrEMBL
Match: tr|A0A2P5DRC6|A0A2P5DRC6_9ROSA (Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic OS=Trema orientalis OX=63057 GN=TorRG33x02_244460 PE=3 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.2e-113
Identity = 192/238 (80.67%), Postives = 219/238 (92.02%), Query Frame = 0

Query: 1   MKVSLIVFFSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 60
           +K+  ++ F L QGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVL TL NGPE
Sbjct: 490 LKIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLLTLTNGPE 549

Query: 61  KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG 120
           KPFVR+IP+HKKYEGAG+K++TFT+RIW+D  DA+ I  DEE+TLMDWGNAI+KGIEKD 
Sbjct: 550 KPFVRIIPRHKKYEGAGQKATTFTRRIWLDYADAELIAADEEVTLMDWGNAIIKGIEKDQ 609

Query: 121 DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL 180
           +G VT+L+G+LHLEGSVKTTKLK TWLP+ NELV LSL+E+DYLITKKKLEEGEDFLDVL
Sbjct: 610 EGKVTQLTGVLHLEGSVKTTKLKLTWLPETNELVNLSLVEFDYLITKKKLEEGEDFLDVL 669

Query: 181 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGRQQS 239
           NPCTKKET A+GDSN+RN+KRG+ILQLERKGYFRCDVPYVRPSKP+VL AIPDGRQQ+
Sbjct: 670 NPCTKKETAAIGDSNIRNLKRGEILQLERKGYFRCDVPYVRPSKPVVLFAIPDGRQQT 727

BLAST of Carg27766 vs. TrEMBL
Match: tr|A0A2P5G299|A0A2P5G299_9ROSA (Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic OS=Trema orientalis OX=63057 GN=TorRG33x02_004410 PE=3 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 3.7e-112
Identity = 191/238 (80.25%), Postives = 217/238 (91.18%), Query Frame = 0

Query: 1   MKVSLIVFFSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 60
           +K+  ++ F L QGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVL TL NGPE
Sbjct: 491 LKIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLLTLTNGPE 550

Query: 61  KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG 120
           KPFVR+IP+HKKYEGAGEK++TFT+RIW+D  DA  I  DEE+TLMDWGNAI+KGIEKD 
Sbjct: 551 KPFVRIIPRHKKYEGAGEKATTFTRRIWLDYADAGLIAADEEVTLMDWGNAIIKGIEKDR 610

Query: 121 DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL 180
           +G VT+L+G+LH EGSVKTTKLK TWLP+ NELV LSL+E+DYLITKKKLEEGEDFLDVL
Sbjct: 611 EGKVTQLTGVLHPEGSVKTTKLKLTWLPETNELVNLSLVEFDYLITKKKLEEGEDFLDVL 670

Query: 181 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGRQQS 239
           NPCTKKET A+GDSN+RN+KRG+ILQLERKGYFRCD+PYVRPSKP+VL AIPDGRQQ+
Sbjct: 671 NPCTKKETAALGDSNIRNLKRGEILQLERKGYFRCDMPYVRPSKPVVLFAIPDGRQQT 728

BLAST of Carg27766 vs. TrEMBL
Match: tr|A0A2P5D8G1|A0A2P5D8G1_PARAD (Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic OS=Parasponia andersonii OX=3476 GN=PanWU01x14_086770 PE=3 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 6.4e-112
Identity = 191/238 (80.25%), Postives = 217/238 (91.18%), Query Frame = 0

Query: 1   MKVSLIVFFSLFQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLFTLDNGPE 60
           +K+  ++ F L QGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVL TL NGPE
Sbjct: 490 LKIEALIQFILEQGASKNLNLMEWDKLWTINKKIIDPVCPRHTAVIEERRVLLTLTNGPE 549

Query: 61  KPFVRVIPKHKKYEGAGEKSSTFTKRIWIDQVDAQCIKVDEEITLMDWGNAIVKGIEKDG 120
           KPFVR+IP+HKKYEGAG+K++TFT+RIW+D  DA+ I  DEE+TLMDWGNAI+KGIEKD 
Sbjct: 550 KPFVRIIPRHKKYEGAGQKATTFTRRIWLDYADAELIAADEEVTLMDWGNAIIKGIEKDQ 609

Query: 121 DGFVTRLSGILHLEGSVKTTKLKATWLPDINELVTLSLMEYDYLITKKKLEEGEDFLDVL 180
           +G VT+L+G LHLEGSVKTTKLK TWLP+ NELV LSL+E+DYLITKKKLEEGEDFLDVL
Sbjct: 610 EGKVTQLTGALHLEGSVKTTKLKLTWLPETNELVHLSLVEFDYLITKKKLEEGEDFLDVL 669

Query: 181 NPCTKKETIAVGDSNMRNIKRGDILQLERKGYFRCDVPYVRPSKPIVLLAIPDGRQQS 239
           NPCTKKET A+GDSN+RN+KRG+ILQLERKGYFRCDVPYVRPSK +VL AIPDGRQQ+
Sbjct: 670 NPCTKKETAAIGDSNIRNLKRGEILQLERKGYFRCDVPYVRPSKRVVLFAIPDGRQQT 727

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022961381.12.9e-13296.27glutamate--tRNA ligase, cytoplasmic-like [Cucurbita moschata] >XP_022961382.1 gl... [more]
XP_023521072.11.9e-13195.85glutamate--tRNA ligase, cytoplasmic-like [Cucurbita pepo subsp. pepo] >XP_023521... [more]
XP_022968862.12.4e-13194.61glutamate--tRNA ligase, cytoplasmic-like [Cucurbita maxima] >XP_022968864.1 glut... [more]
XP_022157609.11.6e-12791.29glutamate--tRNA ligase, cytoplasmic [Momordica charantia][more]
XP_008450490.11.3e-12490.87PREDICTED: glutamate--tRNA ligase, cytoplasmic [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT5G26710.13.8e-10271.91Glutamyl/glutaminyl-tRNA synthetase, class Ic[more]
Match NameE-valueIdentityDescription
sp|O82462|SYEC_ARATH6.8e-10171.91Glutamate--tRNA ligase, cytoplasmic OS=Arabidopsis thaliana OX=3702 GN=At5g26710... [more]
sp|O13775|SYEC_SCHPO7.9e-5746.81Probable glutamate--tRNA ligase, cytoplasmic OS=Schizosaccharomyces pombe (strai... [more]
sp|P46655|SYEC_YEAST9.0e-5344.93Glutamate--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae (strain ATCC 204... [more]
sp|Q54KB8|SYEC_DICDI8.5e-4340.43Probable glutamate--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum OX=4468... [more]
sp|P28668|SYEP_DROME2.1e-4136.63Bifunctional glutamate/proline--tRNA ligase OS=Drosophila melanogaster OX=7227 G... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3BPD2|A0A1S3BPD2_CUCME8.6e-12590.87glutamate--tRNA ligase, cytoplasmic OS=Cucumis melo OX=3656 GN=LOC103492081 PE=3... [more]
tr|A0A0A0LYW4|A0A0A0LYW4_CUCSA2.1e-12390.04Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G561380 PE=3 SV=1[more]
tr|A0A2P5DRC6|A0A2P5DRC6_9ROSA1.2e-11380.67Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic OS=Trema orientalis OX=6... [more]
tr|A0A2P5G299|A0A2P5G299_9ROSA3.7e-11280.25Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic OS=Trema orientalis OX=6... [more]
tr|A0A2P5D8G1|A0A2P5D8G1_PARAD6.4e-11280.25Glutamyl-tRNA synthetase, archaeal/eukaryotic cytosolic OS=Parasponia andersonii... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006418tRNA aminoacylation for protein translation
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR011035Ribosomal_L25/Gln-tRNA_synth
IPR020056Rbsml_L25/Gln-tRNA_synth_N
IPR020059Glu/Gln-tRNA-synth_Ib_codon-bd
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006418 tRNA aminoacylation for protein translation
biological_process GO:0006412 translation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0000166 nucleotide binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg27766-RACarg27766-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020059Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domainPFAMPF03950tRNA-synt_1c_Ccoord: 39..216
e-value: 5.0E-35
score: 120.8
IPR020056Ribosomal protein L25/Gln-tRNA synthetase, N-terminalGENE3DG3DSA:2.40.240.10coord: 47..153
e-value: 2.9E-24
score: 87.6
IPR020056Ribosomal protein L25/Gln-tRNA synthetase, N-terminalGENE3DG3DSA:2.40.240.10coord: 40..46
e-value: 2.9E-24
score: 87.6
coord: 154..226
e-value: 2.9E-24
score: 87.6
NoneNo IPR availablePANTHERPTHR43097FAMILY NOT NAMEDcoord: 2..239
NoneNo IPR availablePANTHERPTHR43097:SF8GLUTAMATE--TRNA LIGASE, CYTOPLASMICcoord: 2..239
IPR011035Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamilySUPERFAMILYSSF50715Ribosomal protein L25-likecoord: 39..236

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg27766Cucurbita maxima (Rimu)carcmaB0421
Carg27766Cucurbita moschata (Rifu)carcmoB0416