Carg27706 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGTTGTTGTTTAAGAAACCAATCGAAGAACGCACCGGAGGATCCGTGCCGGTGTATCTGAATGTCTACGATCTAACCGCGATCAATGGCTACGCTTACTGGTTTGGCCTCGGCGTTTTCCATTCCGGAGTTCAAGGTCAGTAATGGCAGTAATTGCTTCCGTTTGATCTTCGTTTTCTAAGGCGTTTCCTGAGTTTTTTTTTCTATTTTCTCTTGGCCGAATCTCTATTGCTGCTTTTGCGTTTTTTTTTTTCTTATTTTTTTGTGATCTTGCTAATTCGTTGATGCGATGTGATGCGATAAGGGACATTCTTTTTTAATTTTGTGTTTGGATGGGAAGAAGATTTCAGTGACTGTTAACTGTGTGTACTGTGAATCGAGAGATGCATCGGCTGTGAGAAAATGTTCTGATTAGCCAAACGCTTTTCATTAACTGTCAACTTGTTTTACGGCAAATTTTCATCTCGATTCTGCATTTTTTTTTCTATCAATTAGACTACCAAAAAGCTATCGAACTTCGAGCCCGATTTAGGCAGATAAGTAAAATTTTATTAAAAGGCATATACTCATATCTGATTTCGCTACTATTTCCTGTTTTTCGTTTGAATGAACCAATTCGTTTCTTTATAGTATGCGATTTCGTGGTCGATGTCGGTGGAGTTCTTATGCTCAATCTGGTAGATCTTTCAGTTAAATTTGTCAAACTCGATTTGACATTTCTGCTGTGGATTTCGATTGTAGTTCATGGCGTGGAATACGCATTTGGAGCTCACGAGCGCTCAACAACGGGAATTTTTGAAGGAGTGCCGAAGCAATGCGACGGATTTCGATTTAGGAAGACAGTTTTGGTAGGCAAAACAGATATGAAACCAACAGAGGTGAGAGCTTTAATGGATGAACTTGCCCAATCCTACAAGGGAAATGCTTACAATTTGATCACCAAAAACTGCAACCATTTTTGCAATGATGCTTGTGTTAAACTCACAGGGAATTCCATCCCAAACTGGGTTAATCGCCTTGCTAGAATTGGTAAGAAAGTACCTCTTCTTTTTATTCATTCATGACCTGTTTAGCATATCAGATTCTCTTTTCCGTTTGTGCATTTCTACTGATTTCAAGTCCGTTTAAGAGTTTCACATAATTTTCTGATGAACATGAACACAACCCAAATTGAGCTTTCCAGTTCATCATTTTTCTTGATTGTGAATTTGGAATGATCGTGGGTCGTGGGTCGTGAGTTCATAAGTAAGTAATACATCTCCATTTGTATGATGTCTCTTGGAGAACCCAAAACAAAGTCATGGGAGCTTAGGCTCAAAATGGACAATATCATACCATTCTGGAGAGTCGTAATTCCTAACCGTTCTTTAGTAGTAAGATGATCTAGCTGAGATATTATTCGAGACACCATTATAACAGTTTTGATAGTTTTGTTTGATCGGAGAAAGTAACTGAAAAAGTATTTCGAATTTGTAATCTAGTTTACGTGCCTACTTGGTTTTGTGCTGCACCATTTTGGATCAATTGGGCTGTTTCTTTTTTTCTGTTCATTTTTCAGGCTTTCTTTGCAATTGTGTTCTACCAGTGACCTTCAATTCCACCAGAATCCGTCACCACAACAGAATAGAAGACAAGGTTGTAACCATGGAAACAAAGAAGGAATTAACAACTGAATCAACAAAAACTCCCAGTTCTGATTCTACTTCATCTCCTTCCTCGGCCGTTCGCCGAGGAAGAACTCGGACGAGACGAGCTCCTCCTCCGTGTTCTCCATTGCCTTCTCATTCTTTATCCTCGTCTTCATGA ATGATGTTGTTGTTTAAGAAACCAATCGAAGAACGCACCGGAGGATCCGTGCCGGTGTATCTGAATGTCTACGATCTAACCGCGATCAATGGCTACGCTTACTGGTTTGGCCTCGGCGTTTTCCATTCCGGAGTTCAAGTATGCGATTTCGTGGTCGATGTCGGTGGAGTTCTTATGCTCAATCTGGTAGATCTTTCAGTTAAATTTGTCAAACTCGATTTGACATTTCTGCTGTGGATTTCGATTGTAGTTCATGGCGTGGAATACGCATTTGGAGCTCACGAGCGCTCAACAACGGGAATTTTTGAAGGAGTGCCGAAGCAATGCGACGGATTTCGATTTAGGAAGACAGTTTTGGTAGGCAAAACAGATATGAAACCAACAGAGGTGAGAGCTTTAATGGATGAACTTGCCCAATCCTACAAGGGAAATGCTTACAATTTGATCACCAAAAACTGCAACCATTTTTGCAATGATGCTTGTGTTAAACTCACAGGGAATTCCATCCCAAACTGGGTTAATCGCCTTGCTAGAATTGGCTTTCTTTGCAATTGTGTTCTACCAGTGACCTTCAATTCCACCAGAATCCGTCACCACAACAGAATAGAAGACAAGGTTGTAACCATGGAAACAAAGAAGGAATTAACAACTGAATCAACAAAAACTCCCAGTTCTGATTCTACTTCATCTCCTTCCTCGGCCGTTCGCCGAGGAAGAACTCGGACGAGACGAGCTCCTCCTCCGTGTTCTCCATTGCCTTCTCATTCTTTATCCTCGTCTTCATGA ATGATGTTGTTGTTTAAGAAACCAATCGAAGAACGCACCGGAGGATCCGTGCCGGTGTATCTGAATGTCTACGATCTAACCGCGATCAATGGCTACGCTTACTGGTTTGGCCTCGGCGTTTTCCATTCCGGAGTTCAAGTATGCGATTTCGTGGTCGATGTCGGTGGAGTTCTTATGCTCAATCTGGTAGATCTTTCAGTTAAATTTGTCAAACTCGATTTGACATTTCTGCTGTGGATTTCGATTGTAGTTCATGGCGTGGAATACGCATTTGGAGCTCACGAGCGCTCAACAACGGGAATTTTTGAAGGAGTGCCGAAGCAATGCGACGGATTTCGATTTAGGAAGACAGTTTTGGTAGGCAAAACAGATATGAAACCAACAGAGGTGAGAGCTTTAATGGATGAACTTGCCCAATCCTACAAGGGAAATGCTTACAATTTGATCACCAAAAACTGCAACCATTTTTGCAATGATGCTTGTGTTAAACTCACAGGGAATTCCATCCCAAACTGGGTTAATCGCCTTGCTAGAATTGGCTTTCTTTGCAATTGTGTTCTACCAGTGACCTTCAATTCCACCAGAATCCGTCACCACAACAGAATAGAAGACAAGGTTGTAACCATGGAAACAAAGAAGGAATTAACAACTGAATCAACAAAAACTCCCAGTTCTGATTCTACTTCATCTCCTTCCTCGGCCGTTCGCCGAGGAAGAACTCGGACGAGACGAGCTCCTCCTCCGTGTTCTCCATTGCCTTCTCATTCTTTATCCTCGTCTTCATGA MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLMLNLVDLSVKFVKLDLTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLVGKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIGFLCNCVLPVTFNSTRIRHHNRIEDKVVTMETKKELTTESTKTPSSDSTSSPSSAVRRGRTRTRRAPPPCSPLPSHSLSSSS
BLAST of Carg27706 vs. NCBI nr
Match: XP_022954103.1 (deSI-like protein At4g17486 isoform X1 [Cucurbita moschata]) HSP 1 Score: 396.4 bits (1017), Expect = 7.7e-107 Identity = 224/261 (85.82%), Postives = 224/261 (85.82%), Query Frame = 0
BLAST of Carg27706 vs. NCBI nr
Match: XP_023549100.1 (deSI-like protein At4g17486 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 391.0 bits (1003), Expect = 3.2e-105 Identity = 221/261 (84.67%), Postives = 221/261 (84.67%), Query Frame = 0
BLAST of Carg27706 vs. NCBI nr
Match: XP_022991646.1 (deSI-like protein At4g17486 isoform X1 [Cucurbita maxima]) HSP 1 Score: 387.1 bits (993), Expect = 4.7e-104 Identity = 218/260 (83.85%), Postives = 220/260 (84.62%), Query Frame = 0
BLAST of Carg27706 vs. NCBI nr
Match: XP_022954104.1 (deSI-like protein At4g17486 isoform X2 [Cucurbita moschata]) HSP 1 Score: 367.5 bits (942), Expect = 3.8e-98 Identity = 215/261 (82.38%), Postives = 215/261 (82.38%), Query Frame = 0
BLAST of Carg27706 vs. NCBI nr
Match: XP_023549101.1 (deSI-like protein At4g17486 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 362.1 bits (928), Expect = 1.6e-96 Identity = 213/261 (81.61%), Postives = 213/261 (81.61%), Query Frame = 0
BLAST of Carg27706 vs. TAIR10
Match: AT1G80690.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 238.4 bits (607), Expect = 4.9e-63 Identity = 110/191 (57.59%), Postives = 135/191 (70.68%), Query Frame = 0
BLAST of Carg27706 vs. TAIR10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 228.4 bits (581), Expect = 5.1e-60 Identity = 107/198 (54.04%), Postives = 128/198 (64.65%), Query Frame = 0
BLAST of Carg27706 vs. TAIR10
Match: AT2G25190.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 216.9 bits (551), Expect = 1.5e-56 Identity = 105/197 (53.30%), Postives = 127/197 (64.47%), Query Frame = 0
BLAST of Carg27706 vs. TAIR10
Match: AT4G31980.1 (unknown protein) HSP 1 Score: 206.8 bits (525), Expect = 1.6e-53 Identity = 93/187 (49.73%), Postives = 125/187 (66.84%), Query Frame = 0
BLAST of Carg27706 vs. TAIR10
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein) HSP 1 Score: 199.9 bits (507), Expect = 1.9e-51 Identity = 91/184 (49.46%), Postives = 116/184 (63.04%), Query Frame = 0
BLAST of Carg27706 vs. Swiss-Prot
Match: sp|Q93VG8|PPDEX_ARATH (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 1.7e-41 Identity = 75/179 (41.90%), Postives = 106/179 (59.22%), Query Frame = 0
BLAST of Carg27706 vs. Swiss-Prot
Match: sp|Q5PQ09|DESI2_XENLA (Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 8.1e-23 Identity = 61/177 (34.46%), Postives = 87/177 (49.15%), Query Frame = 0
BLAST of Carg27706 vs. Swiss-Prot
Match: sp|Q6DC39|DESI2_DANRE (Deubiquitinase DESI2 OS=Danio rerio OX=7955 GN=desi2 PE=2 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 6.8e-22 Identity = 58/173 (33.53%), Postives = 86/173 (49.71%), Query Frame = 0
BLAST of Carg27706 vs. Swiss-Prot
Match: sp|Q9BSY9|DESI2_HUMAN (Deubiquitinase DESI2 OS=Homo sapiens OX=9606 GN=DESI2 PE=1 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.2e-21 Identity = 61/181 (33.70%), Postives = 89/181 (49.17%), Query Frame = 0
BLAST of Carg27706 vs. Swiss-Prot
Match: sp|Q9D291|DESI2_MOUSE (Deubiquitinase DESI2 OS=Mus musculus OX=10090 GN=Desi2 PE=1 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 1.2e-21 Identity = 61/181 (33.70%), Postives = 89/181 (49.17%), Query Frame = 0
BLAST of Carg27706 vs. TrEMBL
Match: tr|A0A1S3CEJ5|A0A1S3CEJ5_CUCME (deSI-like protein At4g17486 OS=Cucumis melo OX=3656 GN=LOC103499833 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 5.1e-91 Identity = 197/265 (74.34%), Postives = 205/265 (77.36%), Query Frame = 0
BLAST of Carg27706 vs. TrEMBL
Match: tr|A0A0A0KBP9|A0A0A0KBP9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432070 PE=4 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 5.7e-90 Identity = 200/265 (75.47%), Postives = 207/265 (78.11%), Query Frame = 0
BLAST of Carg27706 vs. TrEMBL
Match: tr|A0A2P5E611|A0A2P5E611_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_232180 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 5.9e-71 Identity = 134/210 (63.81%), Postives = 150/210 (71.43%), Query Frame = 0
BLAST of Carg27706 vs. TrEMBL
Match: tr|I1KGV8|I1KGV8_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100817929 PE=4 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69 Identity = 148/258 (57.36%), Postives = 172/258 (66.67%), Query Frame = 0
BLAST of Carg27706 vs. TrEMBL
Match: tr|A0A061G7Z7|A0A061G7Z7_THECC (PPPDE thiol peptidase family protein, putative OS=Theobroma cacao OX=3641 GN=TCM_027401 PE=4 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 1.1e-69 Identity = 138/204 (67.65%), Postives = 157/204 (76.96%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |