Carg27698 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27698
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Mitochondrial fission 1 protein
Location	Cucurbita_argyrosperma_scaffold_417 : 49711 .. 52908 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAATTTGATTCATAGTTATATAAACACCAAATTCAAATCTAGAACATCTCCAAATTCGTTAATCATCTCTTTCGTTTCCTTTGATCTTCGGAAAGTCGTTGATTCATCGCATTTAATGGAGGCAAAGATTGGAAAAATGTTCGAGTCCGTTTCTTCGTTCTTCGGCGGTGGCGACCAAATCCCATGGTGCGATCGTGATGTTATCGTAGTGAGTTTTCTTCTATTCTCTTAAATTCTTGTTTTAAACATTACATTTTCTGTTCGATCTTCTATAATACGAAAGGAAAAACGGAGAAGAATGACTCCGATCGATGAATTTTGTCGTGCTTAGATATACGTTTTTCGAACATAGCGTTACTGATAAACTTTGTAGAAGAAGAAATTGGATTTTTTCCATACAAAATAGGTGTGAAATTGATCTAGGGTTTGTAGATTGAAACATAGTATTTATTTGATTTAAACTGCATATTGAATTTCAGGGGTGTGAAAGAGAAGTTGCAGAGGCCAGCGGAGGTACCTCAGAAGAACGCAAGAATGAAAGTATCATGAGGTTATCATGGGCGCTTGTTCACTCAAGGCAATCGGAGGACATTAATCGTGGCATAGCAATGCTTGAAGGTAAATCATGTTTGAACTTGAGGTCACAGCAAAGAAAATGCATCATGCCTGTGATGATATGTGAAATCTCACCTCGGTTGGAGAAGGGAACGAAACATTTCTTATAAGGGTGTGAAATCTCTTCCTAGTGGACACGTTTGGGAAGCTTGAAAGGGAAACCAAAGAGAACAATATCTCTTGGGCTCTTACAAATGGTATAAGAGCCAAACACCGGGCAGTATGCCAGCTACGACGCTGAGTCCCTAAGGAAGTGGATTGTGAGATCCCACATCGGTCGGAGAGGGGAACAAAACATTTCTTATTAGGGGTGTGGAAATCTCTCCCTAGTGGACGCGTTTTAAAACCTTGAGGGGAAGCTTGAAAAGGTGCTAGCGGTAAGGTATAAACATTTTGGGCTCTTACATCATGATATTATGTGATAACAAACAGCCTGAATTCTGCAAGGAATTTCTGTAGGTGTTTTAGAAATATTCTTGAATTCCTATGAGTTTATTGAATTAGGAAGGACAGTATTTCTCCACTATATGTTTTGATGTCAGCTTCTTGGTTAATAAGGTCACCGTCCTTTAATTAATGCTGTGCAACTTATAAGTAAAGTTTGTAGGGTATAAACATTCTAGGCGGCCGTTCAAAACTGGCCGCTCACAAAGGTCAATTTTCTTAGGCCATAATTGGATATGTTTTTGGTTGTTTGTTTAGTTGTTCTTCAAAGGATTTGTTCTCTTGTATTTTGTGGGACTCATTATGGCCCAGATGAAGAACGAGCAGTATTTCTATATGTGGTTATTAATCTGTGGACTCGGAAACGAGAACTCGAACTCAAACTCGAACACCATGAGCAGGATTTCTATATGGGTTATTAATTTGTGAACTTGGAAACAAGAACTCAAACTCGAATGTCACGAGCAGTATCTCTATATGTGGTTATTAATTTGTGAACTCGGAAATGAGAACTCAAACTCGAACTCGAATGCCATAATCATCTTGTCGTTAAATTTGATTATAAATTAGCTTAGACCTTAAATGGGAGAAGGTACTTTCCATTTGAAGCTACTTTCATCTTGTTTGCTCTGTTCTGAACATTCTCAAACATAGTTACGCAAGTTGAACCATTTTTCTCAAAGCTTATTATTTGTATGGTTGAGTTTTTAAAGTTGGATTAGTATGTGATTTGCAGCTTCCTTAACCAATACTAGGACCCCTTTGCAACAGAGGGAGAAACTTTATTTGTTGGCTGTTGGATATTACAGAAATGCTGAATATGTAAGGAGTCGGCAGCTTTTAGAAAAATGTTTACAGGTTTGTTCCAGTACTTTACTTTTACAGCTTGTATAGAACAATGTTATGTTTCTAAACCTTGTGAGATGGTGGTATTCTGCTAGCTACAATGTTCATTGGTAGCATCACACGTCATTGCACAAATGCTTCATCTTGTAATTTGGTTGGTTGAATGATGCATTTCCTTTCTGAACCTTACTTACAAGTGCAACCAAGATCTGCATGACTCATAAAACTTTTTCAAAGATTTTGATGAATGAAGGAGTGATCTTAGCCGTTGGTTGATGTTGAGGATTGTTGGGAGAGAGTCTCACATTGGCTAATTTAGTGGAAGATCATGGTACGAGCCCTTTTGAGGAAGCACAAAGTATAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGTCGTGATTCCTAACATGGTATCAGAGTCATGCCCTTAATTTAGCCATGTCAATAGAATTCCCAAGTGTCGAACAAAGAAATTGCTAGCCTCGAAGGTGTAGTCAAAAGTGACTCATGTGTCGAACAAAGGGTGTACTTTGCTCGAGGGCTCCAGAGAAAGGAGTCGAGTCTCGATTAAGGGGAGGCTGTTTGAAGGCTACATGGACCTCAGGGGAGTTGGGAGGGAGTCCCACCTTGGCTAATTTAGGGAATGATCATGGGTTTATAAGTGAGGAATACATTTCCATTGGAATGAGGCCTTTTGGGGAAGCCCAAAGCAAAGCCACGAGAACTTATGTTCAAAGTGGACAATATCATACCATTATGGAGAGTCGTGATTCCTAATTGTTGATCGTATATAATTAATGTCTTGGGTTTTTGTAGATTGCACCTGATTGGAGGCAGGCCTCAGCACTTAAAAAGACTGTAGAAGATCAAATTGCTAAAGGTACAATGAGATCCAGATTCTAGAACACCTTTTCTTTAACCTTTTTTATCGGGTCGAATCGTATCCTTAACGAATTCGGTTTGCGGTATCTCGATGTGCAGATGGAGTTATTGGTATTGGCATTGCAGCTACGGCAGTGGGGCTTATAGCTGCCGGGATCGCAGCAGCAGCGAGTCGACGATGATATATATATTGATTCACACCAGAATGTATGCACAATTCAAGCTCTCTTCTCAAGAATGGCTGTCTGATGTTTCCAGTTTGAGCATGAGAAGAATGTTCAACAAAACCAAGAAGTTGAAATCAAATACCTCGTATAGTTCTGCGTTATAAGCATTTCAAATTCTAATACTACTAGGAATCCTATATCTTCATATGTTTATTTTATTTTCT

mRNA sequence

TTAAATTTGATTCATAGTTATATAAACACCAAATTCAAATCTAGAACATCTCCAAATTCGTTAATCATCTCTTTCGTTTCCTTTGATCTTCGGAAAGTCGTTGATTCATCGCATTTAATGGAGGCAAAGATTGGAAAAATGTTCGAGTCCGTTTCTTCGTTCTTCGGCGGTGGCGACCAAATCCCATGGTGCGATCGTGATGTTATCGTAGGGTGTGAAAGAGAAGTTGCAGAGGCCAGCGGAGGTACCTCAGAAGAACGCAAGAATGAAAGTATCATGAGGTTATCATGGGCGCTTGTTCACTCAAGGCAATCGGAGGACATTAATCGTGGCATAGCAATGCTTGAAGCTTCCTTAACCAATACTAGGACCCCTTTGCAACAGAGGGAGAAACTTTATTTGTTGGCTGTTGGATATTACAGAAATGCTGAATATGTAAGGAGTCGGCAGCTTTTAGAAAAATGTTTACAGATTGCACCTGATTGGAGGCAGGCCTCAGCACTTAAAAAGACTGTAGAAGATCAAATTGCTAAAGATGGAGTTATTGGTATTGGCATTGCAGCTACGGCAGTGGGGCTTATAGCTGCCGGGATCGCAGCAGCAGCGAGTCGACGATGATATATATATTGATTCACACCAGAATGTATGCACAATTCAAGCTCTCTTCTCAAGAATGGCTGTCTGATGTTTCCAGTTTGAGCATGAGAAGAATGTTCAACAAAACCAAGAAGTTGAAATCAAATACCTCGTATAGTTCTGCGTTATAAGCATTTCAAATTCTAATACTACTAGGAATCCTATATCTTCATATGTTTATTTTATTTTCT

Coding sequence (CDS)

TTAAATTTGATTCATAGTTATATAAACACCAAATTCAAATCTAGAACATCTCCAAATTCGTTAATCATCTCTTTCGTTTCCTTTGATCTTCGGAAAGTCGTTGATTCATCGCATTTAATGGAGGCAAAGATTGGAAAAATGTTCGAGTCCGTTTCTTCGTTCTTCGGCGGTGGCGACCAAATCCCATGGTGCGATCGTGATGTTATCGTAGGGTGTGAAAGAGAAGTTGCAGAGGCCAGCGGAGGTACCTCAGAAGAACGCAAGAATGAAAGTATCATGAGGTTATCATGGGCGCTTGTTCACTCAAGGCAATCGGAGGACATTAATCGTGGCATAGCAATGCTTGAAGCTTCCTTAACCAATACTAGGACCCCTTTGCAACAGAGGGAGAAACTTTATTTGTTGGCTGTTGGATATTACAGAAATGCTGAATATGTAAGGAGTCGGCAGCTTTTAGAAAAATGTTTACAGATTGCACCTGATTGGAGGCAGGCCTCAGCACTTAAAAAGACTGTAGAAGATCAAATTGCTAAAGATGGAGTTATTGGTATTGGCATTGCAGCTACGGCAGTGGGGCTTATAGCTGCCGGGATCGCAGCAGCAGCGAGTCGACGATGA

Protein sequence

LNLIHSYINTKFKSRTSPNSLIISFVSFDLRKVVDSSHLMEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMRLSWALVHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIAPDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR

Homology

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BLAST of Carg27698 vs. NCBI nr
Match: XP_022932894.1 (mitochondrial fission 1 protein A-like [Cucurbita moschata])

HSP 1 Score: 319.7 bits (818), Expect = 7.2e-84
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 40  MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMRLSWAL 99
           MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMRLSWAL
Sbjct: 1   MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMRLSWAL 60

Query: 100 VHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA 159
           VHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA
Sbjct: 61  VHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA 120

Query: 160 PDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR 206
           PDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR
Sbjct: 121 PDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR 166

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BLAST of Carg27698 vs. NCBI nr
Match: XP_023543604.1 (mitochondrial fission 1 protein A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 317.8 bits (813), Expect = 2.7e-83
Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 40  MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMRLSWAL 99
           MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGG SEERKNESIMRLSWAL
Sbjct: 1   MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGASEERKNESIMRLSWAL 60

Query: 100 VHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA 159
           VHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA
Sbjct: 61  VHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA 120

Query: 160 PDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR 206
           PDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR
Sbjct: 121 PDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR 166

[Close]

BLAST of Carg27698 vs. NCBI nr
Match: XP_022967910.1 (mitochondrial fission 1 protein A-like [Cucurbita maxima])

HSP 1 Score: 315.8 bits (808), Expect = 1.0e-82
Identity = 164/166 (98.80%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 40  MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMRLSWAL 99
           MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGG SEERKNESIMRLSWAL
Sbjct: 1   MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGASEERKNESIMRLSWAL 60

Query: 100 VHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA 159
           VHSRQSEDINRGIAMLEASLTNTR PLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA
Sbjct: 61  VHSRQSEDINRGIAMLEASLTNTRAPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA 120

Query: 160 PDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR 206
           PDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR
Sbjct: 121 PDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR 166

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BLAST of Carg27698 vs. NCBI nr
Match: XP_022966468.1 (mitochondrial fission 1 protein A [Cucurbita maxima])

HSP 1 Score: 287.3 bits (734), Expect = 4.0e-74
Identity = 146/166 (87.95%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 40  MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMRLSWAL 99
           MEAKIGK+FESV+SFFGGGDQIPWCDRDVI GCEREVAEA+ G SEERKNESIMRLSWAL
Sbjct: 1   MEAKIGKLFESVTSFFGGGDQIPWCDRDVIAGCEREVAEANEGASEERKNESIMRLSWAL 60

Query: 100 VHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA 159
           VHSRQSEDINRGIAMLEASL N RTPL +REKLYLLAVGYYR+ EY RSRQL+E+CL+IA
Sbjct: 61  VHSRQSEDINRGIAMLEASLINARTPLDRREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120

Query: 160 PDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR 206
           PDWRQA ALKKTVEDQI KDG+IGIGI ATAVGLIAAGIAAAASRR
Sbjct: 121 PDWRQALALKKTVEDQIGKDGIIGIGITATAVGLIAAGIAAAASRR 166

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BLAST of Carg27698 vs. NCBI nr
Match: XP_004142650.1 (PREDICTED: mitochondrial fission 1 protein A-like [Cucumis sativus] >KGN54520.1 hypothetical protein Csa_4G353620 [Cucumis sativus])

HSP 1 Score: 287.0 bits (733), Expect = 5.2e-74
Identity = 148/166 (89.16%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 40  MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMRLSWAL 99
           MEAKIGK+FESV SFFGGGDQIPWCDRDVI GCEREVAEA    SEERKNESIMRLSWAL
Sbjct: 1   MEAKIGKLFESVCSFFGGGDQIPWCDRDVITGCEREVAEADESASEERKNESIMRLSWAL 60

Query: 100 VHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA 159
           VHSRQSEDINRGIAMLEASLT +RTPLQQREKLYLLAVGYYR+ EY RSRQL+E+CL+IA
Sbjct: 61  VHSRQSEDINRGIAMLEASLTISRTPLQQREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120

Query: 160 PDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR 206
           PDWRQA  LKKTVEDQIAKDGVIGIGI ATAVGLIAAGIAAAASRR
Sbjct: 121 PDWRQALTLKKTVEDQIAKDGVIGIGITATAVGLIAAGIAAAASRR 166

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BLAST of Carg27698 vs. TAIR10
Match: AT3G57090.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 223.0 bits (567), Expect = 1.7e-58
Identity = 112/169 (66.27%), Postives = 136/169 (80.47%), Query Frame = 0


Query: 40  MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMRLSWAL 99
           M+AKIG+ F+SV +FF G D+IPWCD DVI GCEREV EA+   +E+ K E +MRLSWAL
Sbjct: 1   MDAKIGQFFDSVGTFFSGSDKIPWCDGDVIAGCEREVREATDSGTEDLKKECLMRLSWAL 60

Query: 100 VHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA 159
           VHSRQ+ED+ RGIAMLEASL ++  PL+ REKLYLLAVGYYR+  Y RSRQL+++C+++ 
Sbjct: 61  VHSRQTEDVQRGIAMLEASLESSAPPLEDREKLYLLAVGYYRSGNYSRSRQLVDRCIEMQ 120

Query: 160 PDWRQASALKKTVEDQIAKDGVIGIGIAAT---AVGLIAAGIAAAASRR 206
            DWRQA  LKKT+ED+I KDGVIGIGI AT   AVGLIA GI AA SR+
Sbjct: 121 ADWRQALVLKKTIEDKITKDGVIGIGITATAFGAVGLIAGGIVAAMSRK 169

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BLAST of Carg27698 vs. TAIR10
Match: AT5G12390.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 184.5 bits (467), Expect = 6.6e-47
Identity = 99/170 (58.24%), Postives = 125/170 (73.53%), Query Frame = 0


Query: 40  MEAKIGKMFESVSSFFGG-----GDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMR 99
           M+A IGK+F+SVS FF G      D+ P CD D+I GCE+E+AEA     E RK E IMR
Sbjct: 1   MDAAIGKVFDSVSDFFSGAASASADEFPLCDSDIISGCEKELAEAQ---DEGRKKECIMR 60

Query: 100 LSWALVHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEK 159
           LSWALVHS+   DI RGIAMLEA + N  + ++ REKLYLLA+GYYR+ ++ RSR  +E+
Sbjct: 61  LSWALVHSKMPSDIQRGIAMLEALVVNDTSAMKLREKLYLLALGYYRSGDFSRSRDCIER 120

Query: 160 CLQIAPDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASR 205
           CL++ P+  QA ALKK +ED+I KDGVIG+GIA TAVG++ AGIAAA  R
Sbjct: 121 CLEVEPESGQAQALKKAIEDRIVKDGVIGVGIAVTAVGVV-AGIAAAILR 166

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BLAST of Carg27698 vs. Swiss-Prot
Match: sp|Q9M1J1|FIS1A_ARATH (Mitochondrial fission 1 protein A OS=Arabidopsis thaliana OX=3702 GN=FIS1A PE=1 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.0e-57
Identity = 112/169 (66.27%), Postives = 136/169 (80.47%), Query Frame = 0


Query: 40  MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMRLSWAL 99
           M+AKIG+ F+SV +FF G D+IPWCD DVI GCEREV EA+   +E+ K E +MRLSWAL
Sbjct: 1   MDAKIGQFFDSVGTFFSGSDKIPWCDGDVIAGCEREVREATDSGTEDLKKECLMRLSWAL 60

Query: 100 VHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA 159
           VHSRQ+ED+ RGIAMLEASL ++  PL+ REKLYLLAVGYYR+  Y RSRQL+++C+++ 
Sbjct: 61  VHSRQTEDVQRGIAMLEASLESSAPPLEDREKLYLLAVGYYRSGNYSRSRQLVDRCIEMQ 120

Query: 160 PDWRQASALKKTVEDQIAKDGVIGIGIAAT---AVGLIAAGIAAAASRR 206
            DWRQA  LKKT+ED+I KDGVIGIGI AT   AVGLIA GI AA SR+
Sbjct: 121 ADWRQALVLKKTIEDKITKDGVIGIGITATAFGAVGLIAGGIVAAMSRK 169

[Close]

BLAST of Carg27698 vs. Swiss-Prot
Match: sp|Q94CK3|FIS1B_ARATH (Mitochondrial fission 1 protein B OS=Arabidopsis thaliana OX=3702 GN=FIS1B PE=1 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.2e-45
Identity = 99/170 (58.24%), Postives = 125/170 (73.53%), Query Frame = 0


Query: 40  MEAKIGKMFESVSSFFGG-----GDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMR 99
           M+A IGK+F+SVS FF G      D+ P CD D+I GCE+E+AEA     E RK E IMR
Sbjct: 1   MDAAIGKVFDSVSDFFSGAASASADEFPLCDSDIISGCEKELAEAQ---DEGRKKECIMR 60

Query: 100 LSWALVHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEK 159
           LSWALVHS+   DI RGIAMLEA + N  + ++ REKLYLLA+GYYR+ ++ RSR  +E+
Sbjct: 61  LSWALVHSKMPSDIQRGIAMLEALVVNDTSAMKLREKLYLLALGYYRSGDFSRSRDCIER 120

Query: 160 CLQIAPDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASR 205
           CL++ P+  QA ALKK +ED+I KDGVIG+GIA TAVG++ AGIAAA  R
Sbjct: 121 CLEVEPESGQAQALKKAIEDRIVKDGVIGVGIAVTAVGVV-AGIAAAILR 166

[Close]

BLAST of Carg27698 vs. Swiss-Prot
Match: sp|Q6CFJ0|FIS1_YARLI (Mitochondrial fission 1 protein OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=FIS1 PE=3 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-11
Identity = 41/110 (37.27%), Postives = 68/110 (61.82%), Query Frame = 0


Query: 96  SWALVHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKC 155
           +W L+ SR+ ED   G+ +L     +  TP ++RE LY LA+G Y+  EY  +R+  +  
Sbjct: 45  AWGLIKSRKVEDQQLGVQILAQVYKD--TPSRRRECLYYLAIGSYKLGEYTDARKYCDLL 104

Query: 156 LQIAPDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR 206
           LQI PD  Q++ L++ +ED++AK+G+IGI I    + + AA + A  S++
Sbjct: 105 LQIEPDDPQSAKLRQIIEDKLAKEGMIGIAIVGGVIAVGAAVLGAVLSQK 152

[Close]

BLAST of Carg27698 vs. Swiss-Prot
Match: sp|Q9CQ92|FIS1_MOUSE (Mitochondrial fission 1 protein OS=Mus musculus OX=10090 GN=Fis1 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.1e-09
Identity = 44/125 (35.20%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 78  EASGGTSEERKNESIMRLSWALVHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAV 137
           +A+G  S+  + E     +W LV S+ +EDI RGI +LE  L    +  +QR+ ++ LAV
Sbjct: 25  QAAGSVSKSTQFE----YAWCLVRSKYNEDIRRGIVLLE-ELLPKGSKEEQRDYVFYLAV 84

Query: 138 GYYRNAEYVRSRQLLEKCLQIAPDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAG 197
           G YR  EY ++ + +   LQ  P   QA  L++ ++  + KDG++G+ I    VG +A G
Sbjct: 85  GNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKKDGLVGMAI----VGGMALG 140

Query: 198 IAAAA 203
           +A  A
Sbjct: 145 VAGLA 140

[Close]

BLAST of Carg27698 vs. Swiss-Prot
Match: sp|P84817|FIS1_RAT (Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.8e-09
Identity = 43/125 (34.40%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 78  EASGGTSEERKNESIMRLSWALVHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAV 137
           +A+G  S+  + E     +W LV S+ ++DI RGI +LE  L    +  +QR+ ++ LAV
Sbjct: 25  QAAGSVSKSTQFE----YAWCLVRSKYNDDIRRGIVLLE-ELLPKGSKEEQRDYVFYLAV 84

Query: 138 GYYRNAEYVRSRQLLEKCLQIAPDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAG 197
           G YR  EY ++ + +   LQ  P   QA  L++ ++  + KDG++G+ I    VG +A G
Sbjct: 85  GNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAMKKDGLVGMAI----VGGMALG 140

Query: 198 IAAAA 203
           +A  A
Sbjct: 145 VAGLA 140

[Close]

BLAST of Carg27698 vs. TrEMBL
Match: tr|A0A0A0KY38|A0A0A0KY38_CUCSA (Mitochondrial fission 1 protein OS=Cucumis sativus OX=3659 GN=Csa_4G353620 PE=3 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 3.4e-74
Identity = 148/166 (89.16%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 40  MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMRLSWAL 99
           MEAKIGK+FESV SFFGGGDQIPWCDRDVI GCEREVAEA    SEERKNESIMRLSWAL
Sbjct: 1   MEAKIGKLFESVCSFFGGGDQIPWCDRDVITGCEREVAEADESASEERKNESIMRLSWAL 60

Query: 100 VHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA 159
           VHSRQSEDINRGIAMLEASLT +RTPLQQREKLYLLAVGYYR+ EY RSRQL+E+CL+IA
Sbjct: 61  VHSRQSEDINRGIAMLEASLTISRTPLQQREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120

Query: 160 PDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR 206
           PDWRQA  LKKTVEDQIAKDGVIGIGI ATAVGLIAAGIAAAASRR
Sbjct: 121 PDWRQALTLKKTVEDQIAKDGVIGIGITATAVGLIAAGIAAAASRR 166

[Close]

BLAST of Carg27698 vs. TrEMBL
Match: tr|A0A1S3C1F4|A0A1S3C1F4_CUCME (Mitochondrial fission 1 protein OS=Cucumis melo OX=3656 GN=LOC103495805 PE=3 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.0e-73
Identity = 147/166 (88.55%), Postives = 154/166 (92.77%), Query Frame = 0


Query: 40  MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMRLSWAL 99
           MEAKIGK+FESV SFFGGGDQIPWCDRDVI GCEREVAEA    SEERKNESIMRLSWAL
Sbjct: 1   MEAKIGKLFESVCSFFGGGDQIPWCDRDVIAGCEREVAEADESASEERKNESIMRLSWAL 60

Query: 100 VHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA 159
           VHSRQSEDINRGIAMLEASLT +RTPLQQREKLYLLAVGYYR+ EY RSRQL+E+CL+IA
Sbjct: 61  VHSRQSEDINRGIAMLEASLTISRTPLQQREKLYLLAVGYYRSGEYARSRQLVEQCLEIA 120

Query: 160 PDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR 206
           PDWRQA  LKKTVED+IAKDGVIGIGI ATAVGLIAAGIAAAASRR
Sbjct: 121 PDWRQALTLKKTVEDKIAKDGVIGIGITATAVGLIAAGIAAAASRR 166

[Close]

BLAST of Carg27698 vs. TrEMBL
Match: tr|W9QM44|W9QM44_9ROSA (Mitochondrial fission 1 protein OS=Morus notabilis OX=981085 GN=L484_005229 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 2.3e-70
Identity = 137/166 (82.53%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 40  MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMRLSWAL 99
           MEAKIGK FESV SFFGGGDQIPWCDRDVI+GCEREVA+A+ G S+ERKNESIMRLSWAL
Sbjct: 1   MEAKIGKFFESVGSFFGGGDQIPWCDRDVILGCEREVADATNGGSDERKNESIMRLSWAL 60

Query: 100 VHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA 159
           VHSRQ ED+ RG+AMLEASLTN+ +PL+QREK YLLAVGYYR +EY +SRQLLE+CL+IA
Sbjct: 61  VHSRQPEDVRRGVAMLEASLTNSSSPLEQREKFYLLAVGYYRTSEYSKSRQLLEQCLEIA 120

Query: 160 PDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR 206
           PDWRQA ALKKTVED+IAKDGVIGIGIAATAVGLIA GIAAA +R+
Sbjct: 121 PDWRQALALKKTVEDRIAKDGVIGIGIAATAVGLIAGGIAAALARK 166

[Close]

BLAST of Carg27698 vs. TrEMBL
Match: tr|A0A2P5ECC9|A0A2P5ECC9_9ROSA (Mitochondrial fission 1 protein OS=Trema orientalis OX=63057 GN=TorRG33x02_210350 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 6.7e-70
Identity = 135/166 (81.33%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 40  MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMRLSWAL 99
           MEAKIGK FESV SFFGGGDQIPWCDRD+I+GCEREVAEA+ G SEERKNESIMRLSWAL
Sbjct: 1   MEAKIGKFFESVGSFFGGGDQIPWCDRDIILGCEREVAEAADGGSEERKNESIMRLSWAL 60

Query: 100 VHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA 159
           VHSRQ ED+ RG+AMLEASLTN+ +PL+QREKLY+LAVGYYR++EY RSRQ+LE+CL+IA
Sbjct: 61  VHSRQPEDVKRGVAMLEASLTNSNSPLEQREKLYILAVGYYRSSEYSRSRQVLEQCLEIA 120

Query: 160 PDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR 206
           PDWRQA  LKKTVE++IAKDGVIGIGI ATAVGLIA GIAAA +R+
Sbjct: 121 PDWRQALTLKKTVEERIAKDGVIGIGITATAVGLIAGGIAAALARK 166

[Close]

BLAST of Carg27698 vs. TrEMBL
Match: tr|A0A2P5BU26|A0A2P5BU26_PARAD (Mitochondrial fission 1 protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_210180 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.0e-69
Identity = 134/166 (80.72%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 40  MEAKIGKMFESVSSFFGGGDQIPWCDRDVIVGCEREVAEASGGTSEERKNESIMRLSWAL 99
           MEAKIGK FESV SFFGGGDQIPWCDRD+I+GCEREVAEA+ G S+ERKNESIMRLSWAL
Sbjct: 1   MEAKIGKFFESVGSFFGGGDQIPWCDRDIILGCEREVAEAADGGSKERKNESIMRLSWAL 60

Query: 100 VHSRQSEDINRGIAMLEASLTNTRTPLQQREKLYLLAVGYYRNAEYVRSRQLLEKCLQIA 159
           VHSRQ ED+ RG+AMLEASLTN+ +PL+QREKLYLLA+GYYR++EY RSRQ+LE+CL+IA
Sbjct: 61  VHSRQPEDVKRGVAMLEASLTNSSSPLEQREKLYLLAIGYYRSSEYSRSRQVLEQCLEIA 120

Query: 160 PDWRQASALKKTVEDQIAKDGVIGIGIAATAVGLIAAGIAAAASRR 206
           PDWRQA  LKKTVE++IAKDGVIGIGI ATAVGLIA GIAAA +R+
Sbjct: 121 PDWRQALTLKKTVEERIAKDGVIGIGITATAVGLIAGGIAAALARK 166

The following BLAST results are available for this feature:

BLAST of Carg27698 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932894.1	7.2e-84	100.00	mitochondrial fission 1 protein A-like [Cucurbita moschata]	[more]
XP_023543604.1	2.7e-83	99.40	mitochondrial fission 1 protein A-like [Cucurbita pepo subsp. pepo]	[more]
XP_022967910.1	1.0e-82	98.80	mitochondrial fission 1 protein A-like [Cucurbita maxima]	[more]
XP_022966468.1	4.0e-74	87.95	mitochondrial fission 1 protein A [Cucurbita maxima]	[more]
XP_004142650.1	5.2e-74	89.16	PREDICTED: mitochondrial fission 1 protein A-like [Cucumis sativus] >KGN54520.1 ...	[more]

BLAST of Carg27698 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G57090.1	1.7e-58	66.27	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G12390.1	6.6e-47	58.24	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Carg27698 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M1J1\|FIS1A_ARATH	3.0e-57	66.27	Mitochondrial fission 1 protein A OS=Arabidopsis thaliana OX=3702 GN=FIS1A PE=1 ...	[more]
sp\|Q94CK3\|FIS1B_ARATH	1.2e-45	58.24	Mitochondrial fission 1 protein B OS=Arabidopsis thaliana OX=3702 GN=FIS1B PE=1 ...	[more]
sp\|Q6CFJ0\|FIS1_YARLI	1.9e-11	37.27	Mitochondrial fission 1 protein OS=Yarrowia lipolytica (strain CLIB 122 / E 150)...	[more]
sp\|Q9CQ92\|FIS1_MOUSE	3.1e-09	35.20	Mitochondrial fission 1 protein OS=Mus musculus OX=10090 GN=Fis1 PE=1 SV=1	[more]
sp\|P84817\|FIS1_RAT	6.8e-09	34.40	Mitochondrial fission 1 protein OS=Rattus norvegicus OX=10116 GN=Fis1 PE=1 SV=1	[more]

BLAST of Carg27698 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KY38\|A0A0A0KY38_CUCSA	3.4e-74	89.16	Mitochondrial fission 1 protein OS=Cucumis sativus OX=3659 GN=Csa_4G353620 PE=3 ...	[more]
tr\|A0A1S3C1F4\|A0A1S3C1F4_CUCME	1.0e-73	88.55	Mitochondrial fission 1 protein OS=Cucumis melo OX=3656 GN=LOC103495805 PE=3 SV=...	[more]
tr\|W9QM44\|W9QM44_9ROSA	2.3e-70	82.53	Mitochondrial fission 1 protein OS=Morus notabilis OX=981085 GN=L484_005229 PE=3...	[more]
tr\|A0A2P5ECC9\|A0A2P5ECC9_9ROSA	6.7e-70	81.33	Mitochondrial fission 1 protein OS=Trema orientalis OX=63057 GN=TorRG33x02_21035...	[more]
tr\|A0A2P5BU26\|A0A2P5BU26_PARAD	2.0e-69	80.72	Mitochondrial fission 1 protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_2...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0000266	mitochondrial fission

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR033745	Fis1_cytosol
IPR016543	Fis1
IPR011990	TPR-like_helical_dom_sf
IPR028058	Fis1_TPR_N
IPR028061	Fis1_TPR_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000266	mitochondrial fission
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27698-RA	Carg27698-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028061	Fis1, C-terminal tetratricopeptide repeat	PFAM	PF14853	Fis1_TPR_C	coord: 129..181 e-value: 1.6E-20 score: 72.8
IPR028058	Fis1, N-terminal tetratricopeptide repeat	PFAM	PF14852	Fis1_TPR_N	coord: 91..121 e-value: 2.7E-10 score: 39.6
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 68..204 e-value: 3.4E-36 score: 126.2
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 49..202
IPR016543	Mitochondria fission 1 protein	PIRSF	PIRSF008835	TPR_repeat_11_Fis1	coord: 43..205 e-value: 3.4E-44 score: 148.2
IPR016543	Mitochondria fission 1 protein	PANTHER	PTHR13247	TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11	coord: 40..205
None	No IPR available	PANTHER	PTHR13247:SF9	SUBFAMILY NOT NAMED	coord: 40..205
IPR033745	Mitochondria fission protein Fis1, cytosolic domain	CDD	cd12212	Fis1	coord: 62..180 e-value: 1.22168E-35 score: 122.276

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27698	Csa4G353620	Cucumber (Chinese Long) v2	carcuB0122
Carg27698	MELO3C019045	Melon (DHL92) v3.5.1	carmeB0118
Carg27698	CSPI04G17350	Wild cucumber (PI 183967)	carcpiB0127
Carg27698	Cucsa.018240	Cucumber (Gy14) v1	carcgyB0138
Carg27698	CmaCh03G001270	Cucurbita maxima (Rimu)	carcmaB0150
Carg27698	CmoCh03G001700	Cucurbita moschata (Rifu)	carcmoB0159
Carg27698	Cp4.1LG10g11300	Cucurbita pepo (Zucchini)	carcpeB0168
Carg27698	CsGy4G016560	Cucumber (Gy14) v2	carcgybB0122
Carg27698	MELO3C019045.2	Melon (DHL92) v3.6.1	carmedB0121
Carg27698	CsaV3_4G027830	Cucumber (Chinese Long) v3	carcucB0131
Carg27698	Bhi03G002000	Wax gourd	carwgoB0136

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg27698	Watermelon (Charleston Gray)	carwcgB0115
Carg27698	Bottle gourd (USVL1VR-Ls)	carlsiB103
Carg27698	Watermelon (97103) v1	carwmB0114
Carg27698	Watermelon (97103) v2	carwmbB0120