Carg27648 (gene) Silver-seed gourd

Overview
NameCarg27648
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionMyosin heavy chain kinase B
LocationCucurbita_argyrosperma_scaffold_426 : 41646 .. 43009 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATCCTCCTGTTCCGGATTCTCTATATATATACCCTTCACCGAGCAAACTCGCTGCCATTACCATTTCTTCATCTCCCTCTTCCCGCCGGCATGAGTGTCCGATCATGGCTACTCCCCTGCGCCACCGCTACAGCCACCGCCGTCGACTCCAATACGCCGCCTCAATCCTCCTCCTTCTCAATTTCCGACACGTCGGTCAACTCTTCCTCATCGTCGTCGACACCGACTTCCGACACTAGCTGCTCCACTCTCCAAAGCAATCTCTCCCTTCAATCCCAACCGTCCATTCCATCTCTCCAAACTCTCCCCACCGTCACCGATACCGGAAACGTCGCCGTTTCTCAACTTCACCTCGCCTCTTTCAAGCTCCCAATCTCCCATCTCGCCGTCCATGGTCCCCACCTCTATGTCGCCACCGCTCACGAAATCAACGTCTACGATCGATCCACGTACTCCCACGTAGCCTCAATCAACGATCGAGATTCCTCCTCCGGCGCCGTCAAGGGAATCGCCTTTCTAAACGCCCAAATCCTTACTTCCCATCAAGATGGAAAAATCCGCGTCTGGAATTTAACGAATAATCAATTCAAAAAGGTCAACACTCTCCCGACAGTCAACGACCGCCTCCGCCGCTTCATACTCCCGAAAAATTACGTCAACGTCCGCCGTCACAAGAAAGTCCTCTGGATTCAACACGCCGACGCCGTCACTGGACTCGCCGTGAACAGAAATTCATTTTACTCTGTTTCTTGGGATCGGAGTTTGAAAATCTGGCAAGGCTCCGACCACCGCTGCGTCGAGTCCGTCAAGGCAGCGCACGAGGACGCCATAAACGCAGTAGCCGTCTCCGCCGCGGGGATTGTGTACACCGGATCGGCCGATCGGAGAATCAGAGTATGGTCGAAACCCGCTGCGGAGAAACGGCATATTCGGTAACGACTTTAGAGAAGCACAAATCGGCGGTGAATGCATTGGCGTTAAACGACGACGGTTCATTGCTGTTCTCCGGCGCCTGCGACCGGTCCGTTCTGGTGTGGGAAAGAGAGGACGGCGCGAACCACATGGCGGTGATCGGAGCATTGAGGGGACACAAAAACGCGATTCTCTGTTTGATCTACGTCTCGGATTTGCTGTTGAGTGGGTCCGCAGATCGGACGGTCAGAGTTTGGCGACGTGTAGGAGATGGGAGTTTTAACTGCTTGTCCGTACTGGAGGGTCACCGGAAACCGGTGAAATCTCTGGTGGTGGTTTCCGACGGCTTGTTAAACGGCATCGTTTCGGTGTGCAGTGGGAGTCTGGACGGTGAACTGAAAGCCTGGAAACTCTCGTTTTCGAATCTTAATGGAATATTAAATTAG

mRNA sequence

ATGGCCATCCTCCTGTTCCGGATTCTCTATATATATACCCTTCACCGAGCAAACTCGCTGCCATTACCATTTCTTCATCTCCCTCTTCCCGCCGGCATGAGTGTCCGATCATGGCTACTCCCCTGCGCCACCGCTACAGCCACCGCCGTCGACTCCAATACGCCGCCTCAATCCTCCTCCTTCTCAATTTCCGACACGTCGGTCAACTCTTCCTCATCGTCGTCGACACCGACTTCCGACACTAGCTGCTCCACTCTCCAAAGCAATCTCTCCCTTCAATCCCAACCGTCCATTCCATCTCTCCAAACTCTCCCCACCGTCACCGATACCGGAAACGTCGCCGTTTCTCAACTTCACCTCGCCTCTTTCAAGCTCCCAATCTCCCATCTCGCCGTCCATGGTCCCCACCTCTATGTCGCCACCGCTCACGAAATCAACGTCTACGATCGATCCACGTACTCCCACGTAGCCTCAATCAACGATCGAGATTCCTCCTCCGGCGCCGTCAAGGGAATCGCCTTTCTAAACGCCCAAATCCTTACTTCCCATCAAGATGGAAAAATCCGCGTCTGGAATTTAACGAATAATCAATTCAAAAAGGTCAACACTCTCCCGACAGTCAACGACCGCCTCCGCCGCTTCATACTCCCGAAAAATTACGTCAACGTCCGCCGTCACAAGAAAGTCCTCTGGATTCAACACGCCGACGCCGTCACTGGACTCGCCGTGAACAGAAATTCATTTTACTCTGTTTCTTGGGATCGGAGTTTGAAAATCTGGCAAGGCTCCGACCACCGCTGCGTCGAGTCCGTCAAGGCAGCGCACGAGGACGCCATAAACGCAGTAGCCGTCTCCGCCGCGGGGATTGTGTACACCGGATCGGCCGATCGGAGAATCAGAAAGCACAAATCGGCGGTGAATGCATTGGCGTTAAACGACGACGGTTCATTGCTGTTCTCCGGCGCCTGCGACCGGTCCGTTCTGGTGTGGGAAAGAGAGGACGGCGCGAACCACATGGCGGTGATCGGAGCATTGAGGGGACACAAAAACGCGATTCTCTGTTTGATCTACGTCTCGGATTTGCTGTTGAGTGGGTCCGCAGATCGGACGGTCAGAGTTTGGCGACGTGTAGGAGATGGGAGTTTTAACTGCTTGTCCGTACTGGAGGGTCACCGGAAACCGGTGAAATCTCTGGTGGTGGTTTCCGACGGCTTGTTAAACGGCATCGTTTCGGTGTGCAGTGGGAGTCTGGACGGTGAACTGAAAGCCTGGAAACTCTCGTTTTCGAATCTTAATGGAATATTAAATTAG

Coding sequence (CDS)

ATGGCCATCCTCCTGTTCCGGATTCTCTATATATATACCCTTCACCGAGCAAACTCGCTGCCATTACCATTTCTTCATCTCCCTCTTCCCGCCGGCATGAGTGTCCGATCATGGCTACTCCCCTGCGCCACCGCTACAGCCACCGCCGTCGACTCCAATACGCCGCCTCAATCCTCCTCCTTCTCAATTTCCGACACGTCGGTCAACTCTTCCTCATCGTCGTCGACACCGACTTCCGACACTAGCTGCTCCACTCTCCAAAGCAATCTCTCCCTTCAATCCCAACCGTCCATTCCATCTCTCCAAACTCTCCCCACCGTCACCGATACCGGAAACGTCGCCGTTTCTCAACTTCACCTCGCCTCTTTCAAGCTCCCAATCTCCCATCTCGCCGTCCATGGTCCCCACCTCTATGTCGCCACCGCTCACGAAATCAACGTCTACGATCGATCCACGTACTCCCACGTAGCCTCAATCAACGATCGAGATTCCTCCTCCGGCGCCGTCAAGGGAATCGCCTTTCTAAACGCCCAAATCCTTACTTCCCATCAAGATGGAAAAATCCGCGTCTGGAATTTAACGAATAATCAATTCAAAAAGGTCAACACTCTCCCGACAGTCAACGACCGCCTCCGCCGCTTCATACTCCCGAAAAATTACGTCAACGTCCGCCGTCACAAGAAAGTCCTCTGGATTCAACACGCCGACGCCGTCACTGGACTCGCCGTGAACAGAAATTCATTTTACTCTGTTTCTTGGGATCGGAGTTTGAAAATCTGGCAAGGCTCCGACCACCGCTGCGTCGAGTCCGTCAAGGCAGCGCACGAGGACGCCATAAACGCAGTAGCCGTCTCCGCCGCGGGGATTGTGTACACCGGATCGGCCGATCGGAGAATCAGAAAGCACAAATCGGCGGTGAATGCATTGGCGTTAAACGACGACGGTTCATTGCTGTTCTCCGGCGCCTGCGACCGGTCCGTTCTGGTGTGGGAAAGAGAGGACGGCGCGAACCACATGGCGGTGATCGGAGCATTGAGGGGACACAAAAACGCGATTCTCTGTTTGATCTACGTCTCGGATTTGCTGTTGAGTGGGTCCGCAGATCGGACGGTCAGAGTTTGGCGACGTGTAGGAGATGGGAGTTTTAACTGCTTGTCCGTACTGGAGGGTCACCGGAAACCGGTGAAATCTCTGGTGGTGGTTTCCGACGGCTTGTTAAACGGCATCGTTTCGGTGTGCAGTGGGAGTCTGGACGGTGAACTGAAAGCCTGGAAACTCTCGTTTTCGAATCTTAATGGAATATTAAATTAG

Protein sequence

MAILLFRILYIYTLHRANSLPLPFLHLPLPAGMSVRSWLLPCATATATAVDSNTPPQSSSFSISDTSVNSSSSSSTPTSDTSCSTLQSNLSLQSQPSIPSLQTLPTVTDTGNVAVSQLHLASFKLPISHLAVHGPHLYVATAHEINVYDRSTYSHVASINDRDSSSGAVKGIAFLNAQILTSHQDGKIRVWNLTNNQFKKVNTLPTVNDRLRRFILPKNYVNVRRHKKVLWIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVAVSAAGIVYTGSADRRIRKHKSAVNALALNDDGSLLFSGACDRSVLVWEREDGANHMAVIGALRGHKNAILCLIYVSDLLLSGSADRTVRVWRRVGDGSFNCLSVLEGHRKPVKSLVVVSDGLLNGIVSVCSGSLDGELKAWKLSFSNLNGILN
Homology
[Close]
BLAST of Carg27648 vs. NCBI nr
Match: XP_023542157.1 (protein JINGUBANG-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454.5 bits (1168), Expect = 4.0e-124
Identity = 323/422 (76.54%), Postives = 328/422 (77.73%), Query Frame = 0 

Query: 33  MSVRSWLLPCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 92
           MSVRSWLLPCAT            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MSVRSWLLPCATATSTAADSNTPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 93  XXXXXXXXXXXXXXVTDTGNVAVSQLHLASFKLPISHLAVHGPHLYVATAHEINVYDRST 152
           XXXXXXXXXXXXXX TDTGNVAVSQLHLASFKLPISHLAVHGPHLYVATAHEINVYDRST
Sbjct: 61  XXXXXXXXXXXXXXXTDTGNVAVSQLHLASFKLPISHLAVHGPHLYVATAHEINVYDRST 120

Query: 153 YSHVASINDRDSSSGAVKGIAFLNAQILTSHQDGKIRVWNLTNNQFKKVNTLPTVNDRLR 212
           Y+HVASINDRDSSSGAVKGIAFLNAQILTSHQDGKIRVWNLTNNQFKKVNTLPTVNDRLR
Sbjct: 121 YTHVASINDRDSSSGAVKGIAFLNAQILTSHQDGKIRVWNLTNNQFKKVNTLPTVNDRLR 180

Query: 213 RFILPKNYVNVRRHKKVLWIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVK 272
           RF+LPKNYVNVRRHKKVLWIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVK
Sbjct: 181 RFLLPKNYVNVRRHKKVLWIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVK 240

Query: 273 AAHEDAINAVAVSAAGIVYTGSADRRIR------------------KHKSAVNALALNDD 332
           AAHEDAINAVAVSAAGIVYTGSADRRIR                  KHKSAVNALALNDD
Sbjct: 241 AAHEDAINAVAVSAAGIVYTGSADRRIRVWSKPAAEKRHILVTTLEKHKSAVNALALNDD 300

Query: 333 GSLLFSGACDRSVLVWEREDGANHMAVIGALRGHKNAILCLIYVSXXXXXXXXXXXXXXX 392
           G                                        IYVSXXXXXXXXXXXXXXX
Sbjct: 301 GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYVSXXXXXXXXXXXXXXX 360

Query: 393 XXXGDGSFNCLSXXXXXXXXXXXXXXXXXXXXXXIVSVCSGSLDGELKAWKLSFSNLNGI 437
           XX GDGSFNCLS                      +VSVCSGSLDGE+KAWKLSFSN+NGI
Sbjct: 361 XXVGDGSFNCLSVLEGHRKPVKSLVVVSDGLSNGVVSVCSGSLDGEVKAWKLSFSNINGI 420

[Close]
BLAST of Carg27648 vs. NCBI nr
Match: XP_022945487.1 (protein JINGUBANG-like [Cucurbita moschata])

HSP 1 Score: 448.0 bits (1151), Expect = 3.7e-122
Identity = 261/344 (75.87%), Postives = 262/344 (76.16%), Query Frame = 0 

Query: 111 GNVAVSQLHLASFKLPISHLAVHGPHLYVATAHEINVYDRSTYSHVASINDRDSSSGAVK 170
           GNVAVSQLHLASFKLPISHLAVHGPHLYVATAHEINVYDRSTYSHVASIN RDSSSGAVK
Sbjct: 75  GNVAVSQLHLASFKLPISHLAVHGPHLYVATAHEINVYDRSTYSHVASINARDSSSGAVK 134

Query: 171 GIAFLNAQILTSHQDGKIRVWNLTNNQFKKVNTLPTVNDRLRRFILPKNYVNVRRHKKVL 230
           GIAFLNAQILTSHQDGKIRVWNLTNNQFKKVNTLPTVNDRLRRFILPKNYVNVRRHKKVL
Sbjct: 135 GIAFLNAQILTSHQDGKIRVWNLTNNQFKKVNTLPTVNDRLRRFILPKNYVNVRRHKKVL 194

Query: 231 WIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVAVSAAGIV 290
           WIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVAVSAAGIV
Sbjct: 195 WIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVAVSAAGIV 254

Query: 291 YTGSADRRIR------------------KHKSAVNALALNDDGSLLFSGACDRSVLVWER 350
           YTGSADRRIR                  KHKSAVNALALNDDG                 
Sbjct: 255 YTGSADRRIRVWSKPAAEKRHILITTLEKHKSAVNALALNDDGXXXXXXXXXXXXXXXXX 314

Query: 351 EDGANHMAVIGALRGHKNAILCLIYVSXXXXXXXXXXXXXXXXXXGDGSFNCLSXXXXXX 410
                                  IYVSXXXXXXXXXXXXXXXXX GDGSFNCLS      
Sbjct: 315 XXXXXXXXXXXXXXXXXXXXXXXIYVSXXXXXXXXXXXXXXXXXVGDGSFNCLSVLEGHR 374

Query: 411 XXXXXXXXXXXXXXXXIVSVCSGSLDGELKAWKLSFSNLNGILN 437
                           +VSVCSGSLDGELKAWKLSFSNLNGILN
Sbjct: 375 KPVKSLVVVSDGLLNGVVSVCSGSLDGELKAWKLSFSNLNGILN 418

[Close]
BLAST of Carg27648 vs. NCBI nr
Match: XP_022967038.1 (protein JINGUBANG-like [Cucurbita maxima])

HSP 1 Score: 447.6 bits (1150), Expect = 4.9e-122
Identity = 249/347 (71.76%), Postives = 251/347 (72.33%), Query Frame = 0 

Query: 108 TDTGNVAVSQLHLASFKLPISHLAVHGPHLYVATAHEINVYDRSTYSHVASINDRDSSSG 167
           TDTGNVAVSQLHLASFKLPISHLAVHGPHLYVA AHEINVYDRSTY+HVASIN RDSSSG
Sbjct: 75  TDTGNVAVSQLHLASFKLPISHLAVHGPHLYVAIAHEINVYDRSTYTHVASINARDSSSG 134

Query: 168 AVKGIAFLNAQILTSHQDGKIRVWNLTNNQFKKVNTLPTVNDRLRRFILPKNYVNVRRHK 227
           AVKGIAFLNAQILTSHQDGKIRVWNLTNNQFKKVNTLPTVNDRLRRFILPKNYVNVRRHK
Sbjct: 135 AVKGIAFLNAQILTSHQDGKIRVWNLTNNQFKKVNTLPTVNDRLRRFILPKNYVNVRRHK 194

Query: 228 KVLWIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVAVSAA 287
           KVLWIQHADAVTGLAVNRNSFYSVSWDRSLK WQGSDHRCVESVKAAHEDAINAV VSAA
Sbjct: 195 KVLWIQHADAVTGLAVNRNSFYSVSWDRSLKFWQGSDHRCVESVKAAHEDAINAVVVSAA 254

Query: 288 GIVYTGSADRRIR------------------KHKSAVNALALNDDGSLLFSGACDRSVLV 347
           GIVYTGSADRRIR                  KHKSAVNALALNDDG              
Sbjct: 255 GIVYTGSADRRIRVWSKPAAEKRHILVTTLEKHKSAVNALALNDDGXXXXXXXXXXXXXX 314

Query: 348 WEREDGANHMAVIGALRGHKNAILCLIYVSXXXXXXXXXXXXXXXXXXGDGSFNCLSXXX 407
                                     IYVS XXXXXX           GDGSFNCLS   
Sbjct: 315 XXXXXXXXXXXXXXXXXXXXXXXXXXIYVSDXXXXXXADWTVRVWRRVGDGSFNCLSVLE 374

Query: 408 XXXXXXXXXXXXXXXXXXXIVSVCSGSLDGELKAWKLSFSNLNGILN 437
                              +VSVCSGSLDGELKAWKLSFSNLNGILN
Sbjct: 375 GHRKPVKSLVVVSDGLSNGVVSVCSGSLDGELKAWKLSFSNLNGILN 421

[Close]
BLAST of Carg27648 vs. NCBI nr
Match: XP_023525577.1 (protein JINGUBANG-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.5 bits (955), Expect = 2.0e-99
Identity = 226/348 (64.94%), Postives = 243/348 (69.83%), Query Frame = 0 

Query: 109 DTGNVAVSQLHLASFKLPISHLAVHGPHLYVATAHEINVYDRSTYSHVASINDRDSSSGA 168
           D  NV+VSQ HLASFKLPISHLAVHG +LYVATAHEINVYDR T+SH+ + N RDSSSG+
Sbjct: 81  DALNVSVSQHHLASFKLPISHLAVHGAYLYVATAHEINVYDRITFSHITAFNARDSSSGS 140

Query: 169 VKGIAFLNAQILTSHQDGKIRVWNLT--NNQFKKVNTLPTVNDRLRRFILPKNYVNVRRH 228
           VKGI+FL  +ILTSHQDGKIRVWNL+    QFK VNTLPTVNDRLRRFILP NYVNVRRH
Sbjct: 141 VKGISFLRREILTSHQDGKIRVWNLSEKTKQFKLVNTLPTVNDRLRRFILPSNYVNVRRH 200

Query: 229 KKVLWIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVAVSA 288
           KKVLWIQHADAVTGLAVN +S YSVSWDRSLKIWQGS+HRCVESVKAAHEDAINAVAVSA
Sbjct: 201 KKVLWIQHADAVTGLAVNGDSVYSVSWDRSLKIWQGSNHRCVESVKAAHEDAINAVAVSA 260

Query: 289 AGIVYTGSADRRIR------------------KHKSAVNALALNDDGSLLFSGACDRSVL 348
            G VYTGSADR+IR                  KHKSAVNALALNDD              
Sbjct: 261 GGTVYTGSADRKIRVWTKPETEKRHVLVATLEKHKSAVNALALNDDXXXXXXXXXXXXXX 320

Query: 349 VWEREDGANHMAVIGALRGHKNAILCLIYVSXXXXXXXXXXXXXXXXXXGDGSFNCLSXX 408
                                      +YVSXXXXXXXXXXXXXXXXXX DGSFNCLS  
Sbjct: 321 XXXXXXXXXXXXXXXXXXXXXXXXXXXMYVSXXXXXXXXXXXXXXXXXXPDGSFNCLSVL 380

Query: 409 XXXXXXXXXXXXXXXXXXXXIVSVCSGSLDGELKAWKLSFSNLNGILN 437
                               +VSVCSGSLDGELK+WKLSFS  + I+N
Sbjct: 381 EGHKKPVKSLVVVSEGESDGVVSVCSGSLDGELKSWKLSFSPNSNIMN 428

[Close]
BLAST of Carg27648 vs. NCBI nr
Match: XP_022997953.1 (protein JINGUBANG-like [Cucurbita maxima])

HSP 1 Score: 370.9 bits (951), Expect = 5.8e-99
Identity = 224/344 (65.12%), Postives = 242/344 (70.35%), Query Frame = 0 

Query: 113 VAVSQLHLASFKLPISHLAVHGPHLYVATAHEINVYDRSTYSHVASINDRDSSSGAVKGI 172
           V+VSQ HLASFKLPISHLAVHG +LYVATAHEINVYDR T+SH+ + NDRDSSSG+VKGI
Sbjct: 89  VSVSQHHLASFKLPISHLAVHGAYLYVATAHEINVYDRITFSHLTAFNDRDSSSGSVKGI 148

Query: 173 AFLNAQILTSHQDGKIRVWNLT--NNQFKKVNTLPTVNDRLRRFILPKNYVNVRRHKKVL 232
           +FL  +ILTSHQDGKIRVWNL+  N QFK VNTLPTVNDRLRRFILP NYVNVRRHKKVL
Sbjct: 149 SFLRREILTSHQDGKIRVWNLSENNKQFKLVNTLPTVNDRLRRFILPSNYVNVRRHKKVL 208

Query: 233 WIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVAVSAAGIV 292
           WIQHADAVTGLAVN +S YSVSWDRSLK+WQGS+HRCVESVKAAHEDAINAVAVSA G V
Sbjct: 209 WIQHADAVTGLAVNGDSVYSVSWDRSLKVWQGSNHRCVESVKAAHEDAINAVAVSAGGTV 268

Query: 293 YTGSADRRIR------------------KHKSAVNALALNDDGSLLFSGACDRSVLVWER 352
           YTGSADR+IR                  KHKSAVNALALN+                   
Sbjct: 269 YTGSADRKIRVWAKPETEKRHVLVATLEKHKSAVNALALNEXXXXXXXXXXXXXXXXXXX 328

Query: 353 EDGANHMAVIGALRGHKNAILCLIYVSXXXXXXXXXXXXXXXXXXGDGSFNCLSXXXXXX 412
                                  IYVSXXXXXXXXXXXXXXXXXX DGSFNCLS      
Sbjct: 329 XXXXXXXXXXXXXXXXXXXXXXXIYVSXXXXXXXXXXXXXXXXXXADGSFNCLSVLEGHK 388

Query: 413 XXXXXXXXXXXXXXXXIVSVCSGSLDGELKAWKLSFSNLNGILN 437
                           +VSVCSGSLDGELK+WKLSFS  + I+N
Sbjct: 389 KAVKSLVVVSEGESDGVVSVCSGSLDGELKSWKLSFSPNSNIMN 432

[Close]
BLAST of Carg27648 vs. TAIR10
Match: AT1G24530.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 307.4 bits (786), Expect = 1.4e-83
Identity = 184/331 (55.59%), Postives = 223/331 (67.37%), Query Frame = 0 

Query: 116 SQLHLASFKLPISHLAVHGPHLYVATAHEINVYDRSTYSHVASINDRDSSSGAVKGIAFL 175
           S   L    LP++ LAV+G +L+  + HE+++YDR   +H+ + N +D  SG VK + F 
Sbjct: 75  SSFKLRERSLPVTCLAVNGGYLFAVSGHEVSIYDRDMCAHLDTFNGQDPFSGTVKSVGFS 134

Query: 176 NAQILTSHQDGKIRVWNLT-NNQFKKVNTLPTVNDRLRRFILPKNYVNVRRHKKVLWIQH 235
             +I T+HQDGKI VW LT  + +K++ TLPT+NDRLRRF LPKNYV VRRHKK LWI+H
Sbjct: 135 GEKIFTAHQDGKIGVWKLTAKSGYKQLTTLPTLNDRLRRFALPKNYVQVRRHKKRLWIEH 194

Query: 236 ADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVAVSAAGIVYTGS 295
           ADAVT LAV+    YSVSWD++LKIW+ SD RC ES+K AH+DA+NA+AVS  G VYTGS
Sbjct: 195 ADAVTALAVSDGFIYSVSWDKTLKIWRASDLRCKESIK-AHDDAVNAIAVSTNGTVYTGS 254

Query: 296 ADRRIR------------------KHKSAVNALALNDDGSLLFSGACDRSVLVWEREDGA 355
           ADRRIR                  KHKSAVNALALNDDGS+LFSG+CDRS+LVWERED +
Sbjct: 255 ADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTS 314

Query: 356 NHMAVIGALRGHKNAILCLIYVSXXXXXXXXXXXXXXXXXXGDGSFNCLSXXXXXXXXXX 415
           N+MAV GALRGH  AIL      XXXXXXXXXXXXXXXXXX       L           
Sbjct: 315 NYMAVRGALRGHDKAILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEVLSGHTKPVK 374

Query: 416 XXXXXXXXXXXXIVSVCSGSLDGELKAWKLS 428
                       +VS+ SGSLDGE+K WK+S
Sbjct: 375 SLAAVREKELDDVVSIISGSLDGEVKCWKVS 404

[Close]
BLAST of Carg27648 vs. TAIR10
Match: AT5G50120.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 199.9 bits (507), Expect = 3.2e-51
Identity = 117/290 (40.34%), Postives = 167/290 (57.59%), Query Frame = 0 

Query: 113 VAVSQLHLASFKLPISHLAVHGPHLYVATAHEI----NVYDRSTYSHVAS----INDRDS 172
           +A    H AS+   IS L + G  LY  +   +    N     T +  +S    I     
Sbjct: 30  IATLVCHTASY---ISSLTLAGKRLYTGSNDGVVRLWNANTLETLAEASSNGDVITGERG 89

Query: 173 SSGAVKGIAFLNAQILTSHQDGKIRVWNLTN--------NQFKKVNTLPTVNDRLRRFIL 232
             GAVK +  L  ++ T+HQD KIRVW + +         ++  + T+PT++DR  + ++
Sbjct: 90  GGGAVKSLVILADKLFTAHQDHKIRVWKINDVVEEDVGGKKYMHLATMPTISDRFAKCLM 149

Query: 233 PKNYVNVRRHKKVLWIQHADAVTGLAVNRNS--FYSVSWDRSLKIWQGSDHRCVESVKAA 292
           PKN V +RRHKK  W+ H DAV+GLA++R+    YSVSWDR+LKIW+ +D +C+ES   A
Sbjct: 150 PKNQVEIRRHKKASWVHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNA 209

Query: 293 HEDAINAVAVSAAGIVYTGSADRRIR------------------------KHKSAVNALA 352
           H+DAINAVA+S  G +YTGS+D+RI+                        +H S +NALA
Sbjct: 210 HDDAINAVALSENGDIYTGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALA 269

Query: 353 LN-DDGSLLFSGACDRSVLVWEREDGANHMAVIGALRGHKNAILCLIYVS 360
           L+  +GSLL SG  D S+LVWER+DG + + V+G LRGH  ++LCL  VS
Sbjct: 270 LSGTNGSLLHSGGSDGSILVWERDDGGD-IVVVGMLRGHTESVLCLAVVS 315

[Close]
BLAST of Carg27648 vs. TAIR10
Match: AT1G24130.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 181.0 bits (458), Expect = 1.5e-45
Identity = 107/267 (40.07%), Postives = 150/267 (56.18%), Query Frame = 0 

Query: 127 ISHLAVHGPHLYVATAH-EINVYDRS-----TYSHVASINDRDSSSGAVKGIAFLNAQIL 186
           +S LAV    LY  +++ EI V+ R       YS     N   + +G VK +  L  +++
Sbjct: 72  VSSLAVSDKLLYTGSSNSEIRVWPREPPFSPEYSTGDDRNVVANGNGGVKSLVILGDKLI 131

Query: 187 TSHQDGKIRVW------NLTNNQFKKVNTLPTVNDRLRRFILPKNYVNVRRHKKVLWIQH 246
           ++HQD KIRVW      N    ++K V TLPT+NDR +     K+YV VRRHKK  W+ H
Sbjct: 132 SAHQDHKIRVWKIIDESNRRGQKYKCVATLPTMNDRFKTLFSSKSYVEVRRHKKCTWVHH 191

Query: 247 ADAVTGLAVNRNS--FYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVAVSAAGIV-- 306
            DAV+ LA++++    YS SWDRS KIW+ SD +C++S++ AH+DAINA+ VS  G V  
Sbjct: 192 VDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVXX 251

Query: 307 --------YTGSADRR------IRKHKSAVNALALNDDGSLLFSGACDRSVLVWER---- 360
                        D++      + KH              +L+SGACDRS+LVWER    
Sbjct: 252 XXXXXXXXXXNKKDKKHSLVATLTKHLXXXXXXXXXXXXKVLYSGACDRSILVWERLING 311

[Close]
BLAST of Carg27648 vs. TAIR10
Match: AT1G47610.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 120.2 bits (300), Expect = 3.2e-27
Identity = 88/295 (29.83%), Postives = 133/295 (45.08%), Query Frame = 0 

Query: 136 HLYVATAHEINVYDRSTYSHV---ASINDRD---SSSGAVKGIAF-LNAQILTSHQDGKI 195
           H+Y   A    +Y  S  +++    ++N+     S+SG VK I     A++ T HQDGKI
Sbjct: 26  HIYSLAATNDLLYTGSDNNYIRVWKNLNEFSGFKSNSGLVKAIVISREAKVFTGHQDGKI 85

Query: 196 RVWNLTNNQ---FKKVNTLPTVNDRLRRFILPKNYVNVRRHKKVLWIQHADAVT--GLAV 255
           RVW  ++     + +  +LP + D L+  + P NYV VRR +  LWI+H+DAV+   LA 
Sbjct: 86  RVWKTSSKNPRVYTRAGSLPALKDVLKSSVKPSNYVEVRRCRTALWIKHSDAVSCLSLAE 145

Query: 256 NRNSFYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVAVSAA---------------- 315
           ++   YS SWDR++K+W+  D +C+ES+K AH+DA+N+V  + +                
Sbjct: 146 DQGLLYSASWDRTVKVWRIHDLKCIESIK-AHDDAVNSVTTAESXXXXXXXXXXXXXXKR 205

Query: 316 ---------------------------------------GIVYTGSADRRIRKH-----K 359
                                                          D+++ KH     K
Sbjct: 206 EIRGKRTAHSLFQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDKKLLKHCEVFKK 265

[Close]
BLAST of Carg27648 vs. TAIR10
Match: AT3G51930.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-26
Identity = 82/281 (29.18%), Postives = 132/281 (46.98%), Query Frame = 0 

Query: 113 VAVSQLHLASFKLPISHLAVHGPHLYVAT-AHEINVYDRSTYSHVASINDRDSSSGAVKG 172
           +AV   H+ S    +S LA+ G  L  A+   +I V+ +      A     D   G+VK 
Sbjct: 54  LAVLSAHVGS----VSSLALCGEFLLSASQGKDIIVWQQPDLKIFAKFGQGD---GSVKA 113

Query: 173 IAFLNAQILTSHQDGKIRVWNL----TNNQFKKVNTLPTVNDRLRRFILPKNYVNVRRHK 232
           +  + +++ T+HQD +IRVW +    + N F+ V+TLPT  D L +F+   NYV  RR+ 
Sbjct: 114 LVSVGSKVFTAHQDSRIRVWKVSRRNSENAFRLVDTLPTTKDYLGKFMKQSNYVQTRRNH 173

Query: 233 KVLWIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVAVSAA 292
           K LWI+HAD+++ LAV+    YS SWD++LK+W+ SD +C+ES+KA              
Sbjct: 174 KRLWIEHADSISCLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAXXXXXXXXXXXXXX 233

Query: 293 GIVYTGSADRRIR---------------------------KHKSAVNALALNDDGSLLFS 352
                                                   + + +VN++ ++ DG+ ++ 
Sbjct: 234 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLKATLEGRAEVSVNSVVVSGDGNWVYG 293

Query: 353 GACDRSVLVW---EREDGANHMAVIGALRGHKNAILCLIYV 359
           G  D  V+ W   E+E       +    RGH  A+LC+  V
Sbjct: 294 GGSDGFVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCMCVV 327

[Close]
BLAST of Carg27648 vs. Swiss-Prot
Match: sp|O48716|JGB_ARATH (Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 4.2e-24
Identity = 71/220 (32.27%), Postives = 109/220 (49.55%), Query Frame = 0 

Query: 199 KKVNTLPTVNDRLRRFILPKNYVNVRRHKKVLWIQHADAVTGLAVN--RNSFYSVSWDRS 258
           K+  TLPT+ D  +  + P+NYV V++H+  LWI+HADAV+ L++N  +   YS SWDR+
Sbjct: 170 KRSGTLPTLKDIFKASLKPRNYVEVKKHRTALWIKHADAVSCLSLNDEQGLLYSASWDRT 229

Query: 259 LKIWQGSDHRCVESVKAAHEDAINAVAVSAAGIVYTGSADRRIR---------------- 318
           +K+W+ +D +C+ES+  AH+DA+N+V  +   IV++GSAD  ++                
Sbjct: 230 IKVWRIADSKCLESI-PAHDDAVNSVVSTTEAIVFSGSADGTVKAWKRDQQGKYTKHTLM 289

Query: 319 ----KHKSAVNA-----------------------------------------LALNDDG 356
               K +SAV A                                         L L   G
Sbjct: 290 QTLTKQESAVTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGILKGHKLAVLCLEVAG 349

[Close]
BLAST of Carg27648 vs. Swiss-Prot
Match: sp|Q94AD8|FBW3_ARATH (F-box/WD-40 repeat-containing protein At5g21040 OS=Arabidopsis thaliana OX=3702 GN=At5g21040 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 7.4e-05
Identity = 32/115 (27.83%), Postives = 54/115 (46.96%), Query Frame = 0 

Query: 230 LWIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVAVSAAGI 289
           LW  H   +T LA++  S +S SWD S++IW  S  +CV++++  H D +  +A     +
Sbjct: 253 LW-GHEGPITSLALDMTSIFSGSWDMSVRIWDRSSMKCVKTLR--HSDWVWGLAPHETTL 312

Query: 290 VYTGSADRRI-------------RKHKSAVNALALNDDGSLLFSGACDRSVLVWE 332
             T  +D  I               H+    +LA +  G  LF+G  D  + ++E
Sbjct: 313 ASTSGSDVYIWDVSSETPLAIIPDAHEGTTYSLARSHTGDFLFTGGEDGGIKMFE 364

[Close]
BLAST of Carg27648 vs. Swiss-Prot
Match: sp|D1FP53|LIN_MEDTR (Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula OX=3880 GN=LIN PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.8e-04
Identity = 35/123 (28.46%), Postives = 57/123 (46.34%), Query Frame = 0 

Query: 164  SSSGAVKGIAFLNAQILTSHQDGKIRVWNLTNNQFKKVNTLPTVNDRLRRFILPKNYVNV 223
            SS+G V  + +LN Q+L+ H DG I+VW+                    R  +P+     
Sbjct: 1207 SSNGEVLSLHYLNGQVLSGHADGTIKVWD-------------------ARKRIPRVIQET 1266

Query: 224  RRHKKVLWIQHADAVTGLAVNRNSFYSVSWDRSLKIW--QGSDHRCVESV---KAAHEDA 282
            R HKK        AVT L  + +  YS S D+++++W  +    +C++     +A +E A
Sbjct: 1267 REHKK--------AVTSLCSSVDKLYSSSLDKTIRVWTIKPDGIKCIDVYDVKEAVYELA 1302

[Close]
BLAST of Carg27648 vs. Swiss-Prot
Match: sp|C6L7U1|LIN1_LOTJA (Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus OX=34305 GN=CERBERUS PE=2 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 6.3e-04
Identity = 33/122 (27.05%), Postives = 55/122 (45.08%), Query Frame = 0 

Query: 164  SSSGAVKGIAFLNAQILTSHQDGKIRVWNLTNNQFKKVNTLPTVNDRLRRFILPKNYVNV 223
            SS+G V  + +LN Q+L+ H DG I+VW+                 R+ R I   +    
Sbjct: 1204 SSNGEVLSMVYLNGQVLSGHTDGTIKVWD--------------ARKRIPRVIQETH---- 1263

Query: 224  RRHKKVLWIQHADAVTGLAVNRNSFYSVSWDRSLKIW--QGSDHRCVESV---KAAHEDA 281
                     +H  AVT L  + +  YS S D+++++W  +    +C++     +A HE A
Sbjct: 1264 ---------EHTKAVTSLCSSGDRLYSGSLDKTIRVWTIKSDGIKCIDVYDIKEAVHELA 1298

[Close]
BLAST of Carg27648 vs. TrEMBL
Match: tr|A0A0A0KVE4|A0A0A0KVE4_CUCSA (Transducin family protein OS=Cucumis sativus OX=3659 GN=Csa_5G593390 PE=4 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 2.3e-96
Identity = 223/353 (63.17%), Postives = 240/353 (67.99%), Query Frame = 0 

Query: 108 TDTGNVAVSQLHLASFKLPISHLAVHGPHLYVATAHEINVYDRSTYSHVASINDRDSSSG 167
           TD+ +V +SQ  +ASFKLPISHLAVHGP+LYVATAHEINVYDR T+SH+   N  DSSSG
Sbjct: 84  TDSFHVTLSQFPVASFKLPISHLAVHGPYLYVATAHEINVYDRLTFSHITGFNAPDSSSG 143

Query: 168 AVKGIAFLNAQILTSHQDGKIRVWNL---TNNQFKKVNTLPTVNDRLRRFILPKNYVNVR 227
           +VKGIAFL  QILTSHQDGKIRVWNL    NNQFK VNTLPTVNDRLRRFILPKNYVNVR
Sbjct: 144 SVKGIAFLPRQILTSHQDGKIRVWNLLHKKNNQFKLVNTLPTVNDRLRRFILPKNYVNVR 203

Query: 228 RHKKVLWIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVAV 287
           RHKK+LWIQHADAVTGLAVN  S YSVSWDRSLKIW+GSDHRCVESVKAAHEDA+NAVAV
Sbjct: 204 RHKKLLWIQHADAVTGLAVNNGSIYSVSWDRSLKIWRGSDHRCVESVKAAHEDAVNAVAV 263

Query: 288 SAAGIVYTGSADRRIR------------------KHKSAVNALALNDDGSLLFSGACDRS 347
           SA G VYTGSADR+IR                  KHKSAVNALALN+D            
Sbjct: 264 SAGGTVYTGSADRKIRVWAKPEAEKRHVLVATLEKHKSAVNALALNEDXXXXXXXXXXXX 323

Query: 348 VLVWEREDGANHMAVIGALRGHKNAILCLIYVSXXXXXXXXXXXXXXXXXXGDGSFNCLS 407
                                        IYVSXXXXXXXXXXXXXXXXXX   SF+CL+
Sbjct: 324 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXIYVSXXXXXXXXXXXXXXXXXXXXXSFSCLT 383

Query: 408 ----XXXXXXXXXXXXXXXXXXXXXXIVSVCSGSLDGELKAWKLSFSNLNGIL 436
                                     +VSVCSGSLDGELKAWK+S SNLN  L
Sbjct: 384 VLEGHKKPVKSLVIVSEAEGMMRNGGVVSVCSGSLDGELKAWKISLSNLNSPL 436

[Close]
BLAST of Carg27648 vs. TrEMBL
Match: tr|A0A1R3KW12|A0A1R3KW12_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_00577 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 4.7e-89
Identity = 206/344 (59.88%), Postives = 244/344 (70.93%), Query Frame = 0 

Query: 109 DTGNVAVSQLHLASF----KLPISHLAVHGPHLYVATAHEINVYDRSTYSHVASINDRDS 168
           +T   +VS + + S     K PI+ LAV G  LY A+ +EINVYDR T + +   N +DS
Sbjct: 86  ETLTFSVSNITVTSIKPRPKHPITCLAVQGNFLYAASVNEINVYDRETSTLLDVYNGQDS 145

Query: 169 SSGAVKGIAFLNAQILTSHQDGKIRVWNLT-NNQFKKVNTLPTVNDRLRRFILPKNYVNV 228
           SSG+VK I+F N ++ ++HQD KIRVW +T   + K + +LPTVNDRLRRFILPKNYVNV
Sbjct: 146 SSGSVKSISFCNGKVFSAHQDCKIRVWQMTMTKKHKFLTSLPTVNDRLRRFILPKNYVNV 205

Query: 229 RRHKKVLWIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVA 288
           RRH K LWI+HADAVTGLAVN    YSVSWD+SLKIW+ SD RC++S+K AH+DAINAV 
Sbjct: 206 RRHVKRLWIEHADAVTGLAVNNGLIYSVSWDKSLKIWRASDVRCLQSIK-AHDDAINAVT 265

Query: 289 VSAAGIVYTGSADRRIR------------------KHKSAVNALALNDDGSLLFSGACDR 348
           VSA GIVYTGSAD+RIR                  KHKSAVNALALNDDGS+LFSGACDR
Sbjct: 266 VSADGIVYTGSADKRIRVWAKPSGEKRYELVATLEKHKSAVNALALNDDGSVLFSGACDR 325

Query: 349 SVLVWEREDGANHMAVIGALRGHKNAILCLIYVSXXXXXXXXXXXXXXXXXXGDGSFNCL 408
           S+LVWERED A++MAV GALRGH  AILCLI V XXXXXXXXXXXXXXXXXX +G F CL
Sbjct: 326 SILVWEREDSADYMAVTGALRGHGKAILCLINVXXXXXXXXXXXXXXXXXXXVEGKFCCL 385

Query: 409 SXXXXXXXXXXXXXXXXXXXXXXIVSVCSGSLDGELKAWKLSFS 430
           +                      +VSV SGSLDGE++ WK+S S
Sbjct: 386 AVLEGHEKPVKSLTAVKEDEQNGVVSVISGSLDGEIRTWKVSVS 428

[Close]
BLAST of Carg27648 vs. TrEMBL
Match: tr|A0A1S3BFV1|A0A1S3BFV1_CUCME (F-box/WD repeat-containing protein sel-10-like OS=Cucumis melo OX=3656 GN=LOC103489545 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.4e-88
Identity = 174/228 (76.32%), Postives = 188/228 (82.46%), Query Frame = 0 

Query: 108 TDTGNVAVSQLHLASFKLPISHLAVHGPHLYVATAHEINVYDRSTYSHVASINDRDSSSG 167
           +D+ +V +SQ  +ASFKLPISHLAVHGP+LYVATAHEINVYDR T+SHV   N RDSSSG
Sbjct: 84  SDSFHVTLSQFPVASFKLPISHLAVHGPYLYVATAHEINVYDRLTFSHVTGFNARDSSSG 143

Query: 168 AVKGIAFLNAQILTSHQDGKIRVWNL---TNNQFKKVNTLPTVNDRLRRFILPKNYVNVR 227
           +VKG AFL  +ILTSHQDGKIRVWNL    NNQFK VNTLPTVNDRLRRFILPKNYVNVR
Sbjct: 144 SVKGFAFLRREILTSHQDGKIRVWNLLDKKNNQFKLVNTLPTVNDRLRRFILPKNYVNVR 203

Query: 228 RHKKVLWIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVAV 287
           RHKK+LWIQHADAVTGLAVN +S YSVSWDRSLKIW+GSDHRC+ESVKAAHEDAINAVAV
Sbjct: 204 RHKKLLWIQHADAVTGLAVNNDSIYSVSWDRSLKIWRGSDHRCIESVKAAHEDAINAVAV 263

Query: 288 SAAGIVYTGSADRRIR------------------KHKSAVNALALNDD 315
           SA G VYTGSADR+IR                  KHKSAVNALALN D
Sbjct: 264 SAGGTVYTGSADRKIRVWAKPEAEKRHVLVATLEKHKSAVNALALNKD 311

[Close]
BLAST of Carg27648 vs. TrEMBL
Match: tr|A0A1R3IG54|A0A1R3IG54_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_23512 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 6.4e-86
Identity = 202/344 (58.72%), Postives = 238/344 (69.19%), Query Frame = 0 

Query: 109 DTGNVAVSQLHLASF----KLPISHLAVHGPHLYVATAHEINVYDRSTYSHVASINDRDS 168
           +T   +VS + + S     K PI+ LAV G  LY A+ +EINVYDR T + +   N +DS
Sbjct: 86  ETLTFSVSNITVTSIKPRAKHPITCLAVQGNFLYAASVNEINVYDRETSTLLDVYNGQDS 145

Query: 169 SSGAVKGIAFLNAQILTSHQDGKIRVWNLT-NNQFKKVNTLPTVNDRLRRFILPKNYVNV 228
           SSG+VK I+F N ++ ++HQD KIRVW +T   + K +  LPTVNDRLRRFILPKNYVNV
Sbjct: 146 SSGSVKSISFCNGKVFSAHQDCKIRVWQMTMTKKHKFLTALPTVNDRLRRFILPKNYVNV 205

Query: 229 RRHKKVLWIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVA 288
           RRH K LWI+HADAVTGLAVN    YSVSWD+SLKIW+ SD RC++S+K AH+DAINAV 
Sbjct: 206 RRHVKRLWIEHADAVTGLAVNNGLIYSVSWDKSLKIWRASDVRCLQSIK-AHDDAINAVT 265

Query: 289 VSAAGIVYTGSADRRIR------------------KHKSAVNALALNDDGSLLFSGACDR 348
           VSA G VYTGSAD+RIR                  KHKSAVNALALNDDGS+LFSGACDR
Sbjct: 266 VSADGTVYTGSADKRIRVWAKPSGEKRYELVATLEKHKSAVNALALNDDGSVLFSGACDR 325

Query: 349 SVLVWEREDGANHMAVIGALRGHKNAILCLIYVSXXXXXXXXXXXXXXXXXXGDGSFNCL 408
           S+LVWERED A++MAV GALRGH  AILCLI   XXXXXXXXXXXXXXXXXX      CL
Sbjct: 326 SILVWEREDSADYMAVTGALRGHGKAILCLINXXXXXXXXXXXXXXXXXXXXXXXXXCCL 385

Query: 409 SXXXXXXXXXXXXXXXXXXXXXXIVSVCSGSLDGELKAWKLSFS 430
           +                      +VSV SGSLDGE++ WK+S S
Sbjct: 386 AVLEGHEKPVKSLTAVKEEEQNGVVSVISGSLDGEIRTWKVSVS 428

[Close]
BLAST of Carg27648 vs. TrEMBL
Match: tr|A0A061E701|A0A061E701_THECC (Transducin/WD40 repeat-like superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_010648 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 6.0e-84
Identity = 199/344 (57.85%), Postives = 234/344 (68.02%), Query Frame = 0 

Query: 109 DTGNVAVSQLHLASF----KLPISHLAVHGPHLYVATAHEINVYDRSTYSHVASINDRDS 168
           +T + +VSQ+ + S     K PI+ +AV G  LY A+ +EINVYDR T + V   N +DS
Sbjct: 85  ETIHFSVSQISVTSINPRTKHPITCVAVQGNLLYAASVNEINVYDRETSTLVDVYNSQDS 144

Query: 169 SSGAVKGIAFLNAQILTSHQDGKIRVWNLT-NNQFKKVNTLPTVNDRLRRFILPKNYVNV 228
           SSG+VK + F N +I T+HQD KIRVW +T   Q K +  LPTVNDRLR FILPKNYVNV
Sbjct: 145 SSGSVKSVTFCNGKIFTAHQDCKIRVWKMTMTKQHKFLTALPTVNDRLRHFILPKNYVNV 204

Query: 229 RRHKKVLWIQHADAVTGLAVNRNSFYSVSWDRSLKIWQGSDHRCVESVKAAHEDAINAVA 288
           RRH K LWI+HADAVTGLAVN+   YSVSWD++ KIW+ SD RC++S+K AH+DAINAVA
Sbjct: 205 RRHVKRLWIEHADAVTGLAVNKGLIYSVSWDKTFKIWRASDVRCLQSIK-AHDDAINAVA 264

Query: 289 VSAAGIVYTGSADRRIR------------------KHKSAVNALALNDDGSLLFSGACDR 348
            SA G VYTGSADRRIR                  KHKSAVNALALND+GS+LFSGACDR
Sbjct: 265 ASADGTVYTGSADRRIRVWAKPSGEKRYELVATLEKHKSAVNALALNDEGSVLFSGACDR 324

Query: 349 SVLVWEREDGANHMAVIGALRGHKNAILCLIYVSXXXXXXXXXXXXXXXXXXGDGSFNCL 408
           S+LVWERED AN+M V GALRGH  AIL      XXXXXXXXXXXXXXXXXX      CL
Sbjct: 325 SILVWEREDSANYMVVTGALRGHGKAILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCCL 384

Query: 409 SXXXXXXXXXXXXXXXXXXXXXXIVSVCSGSLDGELKAWKLSFS 430
           +                      +VSV SGSLDGE++ WK+S S
Sbjct: 385 AVLEGHQKPVKSLTAVKEDEQRDVVSVISGSLDGEVRTWKVSVS 427

The following BLAST results are available for this feature:
BLAST of Carg27648 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023542157.14.0e-12476.54protein JINGUBANG-like [Cucurbita pepo subsp. pepo][more]
XP_022945487.13.7e-12275.87protein JINGUBANG-like [Cucurbita moschata][more]
XP_022967038.14.9e-12271.76protein JINGUBANG-like [Cucurbita maxima][more]
XP_023525577.12.0e-9964.94protein JINGUBANG-like [Cucurbita pepo subsp. pepo][more]
XP_022997953.15.8e-9965.12protein JINGUBANG-like [Cucurbita maxima][more]
BLAST of Carg27648 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G24530.11.4e-8355.59Transducin/WD40 repeat-like superfamily protein[more]
AT5G50120.13.2e-5140.34Transducin/WD40 repeat-like superfamily protein[more]
AT1G24130.11.5e-4540.07Transducin/WD40 repeat-like superfamily protein[more]
AT1G47610.13.2e-2729.83Transducin/WD40 repeat-like superfamily protein[more]
AT3G51930.11.2e-2629.18Transducin/WD40 repeat-like superfamily protein[more]
BLAST of Carg27648 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O48716|JGB_ARATH4.2e-2432.27Protein JINGUBANG OS=Arabidopsis thaliana OX=3702 GN=JGB PE=1 SV=1[more]
sp|Q94AD8|FBW3_ARATH7.4e-0527.83F-box/WD-40 repeat-containing protein At5g21040 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|D1FP53|LIN_MEDTR2.8e-0428.46Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula OX=3880 GN=LIN P... [more]
sp|C6L7U1|LIN1_LOTJA6.3e-0427.05Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus OX=34305 GN=CERBER... [more]
BLAST of Carg27648 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KVE4|A0A0A0KVE4_CUCSA2.3e-9663.17Transducin family protein OS=Cucumis sativus OX=3659 GN=Csa_5G593390 PE=4 SV=1[more]
tr|A0A1R3KW12|A0A1R3KW12_COCAP4.7e-8959.88Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_00577 PE=4 ... [more]
tr|A0A1S3BFV1|A0A1S3BFV1_CUCME1.4e-8876.32F-box/WD repeat-containing protein sel-10-like OS=Cucumis melo OX=3656 GN=LOC103... [more]
tr|A0A1R3IG54|A0A1R3IG54_9ROSI6.4e-8658.72Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_23512 PE=4 SV=1[more]
tr|A0A061E701|A0A061E701_THECC6.0e-8457.85Transducin/WD40 repeat-like superfamily protein OS=Theobroma cacao OX=3641 GN=TC... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg27648-RACarg27648-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 179..193
score: 30.3
coord: 412..426
score: 33.87
coord: 362..376
score: 40.44
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 381..425
e-value: 0.53
score: 18.8
coord: 225..261
e-value: 0.11
score: 21.5
coord: 338..375
e-value: 2.7E-5
score: 33.6
coord: 292..331
e-value: 4.6E-6
score: 36.1
coord: 152..192
e-value: 0.73
score: 17.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 302..330
e-value: 0.002
score: 18.8
coord: 343..374
e-value: 1.3E-4
score: 22.6
coord: 383..425
e-value: 0.028
score: 15.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 179..201
score: 8.537
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 345..374
score: 12.213
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 299..340
score: 13.182
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 102..212
e-value: 8.1E-8
score: 33.2
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 300..433
e-value: 1.0E-28
score: 102.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 221..299
e-value: 1.6E-11
score: 45.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..86
NoneNo IPR availablePANTHERPTHR22844:SF199F21J9.19coord: 65..430
NoneNo IPR availablePANTHERPTHR22844F-BOX AND WD40 DOMAIN PROTEINcoord: 65..430
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 179..193
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 299..436
score: 21.753
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 231..300
score: 9.23
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILYSSF50978WD40 repeat-likecoord: 229..427
coord: 119..199