Carg27603 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27603
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein TIFY 10a
Location	Cucurbita_argyrosperma_scaffold_521 : 36636 .. 37824 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTATGTCCGAGTCCGACCATTAATGAATCCCACCTCCGGCAGCTATTTTATAAAAACTCTCATCTTCTTCTTTAAGATCAGAACTTTTTCCATTCTCTGGTTTTTTTCTGCAAACCCATGTCGAGTTCTTCCGGATTCTCTCGGGTTTCTTCTCAGAGATCGGCATCGAACTCGCCGGAAAAGCGAGGTTTTGTTCCCGTCGGTGGTATGTTGGTTTCCGGCGGGGATCTGAATACGGGTTTCTCAGCCTGTCGGCGGCGGAAAAACGGTGAGGATTTGTGTGGGTTGGGATTGGAATTTATTTTAAGGGGTTTGTTTTGATTTGAGAGAAACTGAAATTTGTAGGGTCGGCGCCGGAATTCTTCTTTCAGCCGGAAAAAATGGTGAATCGGAAGTCTTTGGATTTGTTCCCTCAGCAAGCTGGATTTGGTGTCTCAAACGACGTCGATTCGAGGTGTGTAATGAACCGAGTTTTCGACCGTCTTGTTTTTTTTTTTTTGAGCAATTTATTGTTTGATTGAGTGAAAATTTTGTTTTAGTGTCTGTAAATCGGTCATGGCGGCGCCTCAAACGTCCCAAATGACGATTTTTTACGCCGGCCGAGTTTTTGTGTTCAACAATGTTCCGGTGGACAGAGTCGGTGAAGTTATGTTTCTGGCCGGCCGAGAGAGCTCCAAGAACGCCGCTAACCAGCGGGTATTGGTCGAAACTCCGACTGATTCGTTGAGCTCCACTTCCCCTGCTTCCTCTCGCAACCAAACTCCACCGCCGCCGCCGCCACAGCCGCAGCCCGTTACCGGTGGTAATTAACTCATAACCAACAAACCCCTTTTCTAGATTTCCTCAACTTCTCCTCGCCGGCTGATGATTTCTCTTCCATTTCCGCAGCTCTTCCGATGGCTCGTAAAGCTTCGATTCAGCGTTTCTTGGAGAAGAGAAAAGACAGGTGGGTTTTCATTCAATTCCCTCAGCTCTCCTCCATGGAAATGGGTTTAATTTGCTCTGTTTTCAACAGGATGACTGCCAGAGCGCCGTACCAGGGCATCCCGACGGCAAGCAAGAACGCCGGCGACAACTCGTGGCTGGGTTTGGCTGTGCAGCCATAACTTTAATGGTGCTTTTTTTTTATATATATATATTATCAAGTATTGTGAAATCTAGTTGAGCTGTTTTGTATTAGGGTTCT

mRNA sequence

ATTTTATGTCCGAGTCCGACCATTAATGAATCCCACCTCCGGCAGCTATTTTATAAAAACTCTCATCTTCTTCTTTAAGATCAGAACTTTTTCCATTCTCTGGTTTTTTTCTGCAAACCCATGTCGAGTTCTTCCGGATTCTCTCGGGTTTCTTCTCAGAGATCGGCATCGAACTCGCCGGAAAAGCGAGGTTTTGTTCCCGTCGGTGGTATGTTGGTTTCCGGCGGGGATCTGAATACGGGTTTCTCAGCCTGTCGGCGGCGGAAAAACGGGTCGGCGCCGGAATTCTTCTTTCAGCCGGAAAAAATGGTGAATCGGAAGTCTTTGGATTTGTTCCCTCAGCAAGCTGGATTTGGTGTCTCAAACGACGTCGATTCGAGTGTCTGTAAATCGGTCATGGCGGCGCCTCAAACGTCCCAAATGACGATTTTTTACGCCGGCCGAGTTTTTGTGTTCAACAATGTTCCGGTGGACAGAGTCGGTGAAGTTATGTTTCTGGCCGGCCGAGAGAGCTCCAAGAACGCCGCTAACCAGCGGGTATTGGTCGAAACTCCGACTGATTCGTTGAGCTCCACTTCCCCTGCTTCCTCTCGCAACCAAACTCCACCGCCGCCGCCGCCACAGCCGCAGCCCGTTACCGGTGCTCTTCCGATGGCTCGTAAAGCTTCGATTCAGCGTTTCTTGGAGAAGAGAAAAGACAGGATGACTGCCAGAGCGCCGTACCAGGGCATCCCGACGGCAAGCAAGAACGCCGGCGACAACTCGTGGCTGGGTTTGGCTGTGCAGCCATAACTTTAATGGTGCTTTTTTTTTATATATATATATTATCAAGTATTGTGAAATCTAGTTGAGCTGTTTTGTATTAGGGTTCT

Coding sequence (CDS)

ATGTCGAGTTCTTCCGGATTCTCTCGGGTTTCTTCTCAGAGATCGGCATCGAACTCGCCGGAAAAGCGAGGTTTTGTTCCCGTCGGTGGTATGTTGGTTTCCGGCGGGGATCTGAATACGGGTTTCTCAGCCTGTCGGCGGCGGAAAAACGGGTCGGCGCCGGAATTCTTCTTTCAGCCGGAAAAAATGGTGAATCGGAAGTCTTTGGATTTGTTCCCTCAGCAAGCTGGATTTGGTGTCTCAAACGACGTCGATTCGAGTGTCTGTAAATCGGTCATGGCGGCGCCTCAAACGTCCCAAATGACGATTTTTTACGCCGGCCGAGTTTTTGTGTTCAACAATGTTCCGGTGGACAGAGTCGGTGAAGTTATGTTTCTGGCCGGCCGAGAGAGCTCCAAGAACGCCGCTAACCAGCGGGTATTGGTCGAAACTCCGACTGATTCGTTGAGCTCCACTTCCCCTGCTTCCTCTCGCAACCAAACTCCACCGCCGCCGCCGCCACAGCCGCAGCCCGTTACCGGTGCTCTTCCGATGGCTCGTAAAGCTTCGATTCAGCGTTTCTTGGAGAAGAGAAAAGACAGGATGACTGCCAGAGCGCCGTACCAGGGCATCCCGACGGCAAGCAAGAACGCCGGCGACAACTCGTGGCTGGGTTTGGCTGTGCAGCCATAA

Protein sequence

MSSSSGFSRVSSQRSASNSPEKRGFVPVGGMLVSGGDLNTGFSACRRRKNGSAPEFFFQPEKMVNRKSLDLFPQQAGFGVSNDVDSSVCKSVMAAPQTSQMTIFYAGRVFVFNNVPVDRVGEVMFLAGRESSKNAANQRVLVETPTDSLSSTSPASSRNQTPPPPPPQPQPVTGALPMARKASIQRFLEKRKDRMTARAPYQGIPTASKNAGDNSWLGLAVQP

Homology

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BLAST of Carg27603 vs. NCBI nr
Match: XP_022925649.1 (protein TIFY 10A-like [Cucurbita moschata])

HSP 1 Score: 377.9 bits (969), Expect = 2.4e-101
Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0


Query: 1   MSSSSGFSRVSSQRSASNSPEKRGFVPVGGMLVSGGDLNTGFSACRRRKNGSAPEFFFQP 60
           MSSSSGFSRVSSQRSASNSPEKRGFVPVGGMLVSGGDLNTGFSACRRRKNGSAPEFFFQP
Sbjct: 1   MSSSSGFSRVSSQRSASNSPEKRGFVPVGGMLVSGGDLNTGFSACRRRKNGSAPEFFFQP 60

Query: 61  EKMVNRKSLDLFPQQAGFGVSNDVDSSVCKSVMAAPQTSQMTIFYAGRVFVFNNVPVDRV 120
           EKMVNRKSLDLFPQQAGFGVSNDVDSSVCKS MAAPQTSQMTIFYAGRVFVFNNVPVDRV
Sbjct: 61  EKMVNRKSLDLFPQQAGFGVSNDVDSSVCKSAMAAPQTSQMTIFYAGRVFVFNNVPVDRV 120

Query: 121 GEVMFLAGRESSKNAANQRVLVETPTDXXXXXXXXXXXXXXXXXXXXXXXXXTGALPMAR 180
           GEVMFLAGRESSKNAANQRVLVETPTDXXXXXXXXXXXXXXXXXXXXXXXXXTGALPMAR
Sbjct: 121 GEVMFLAGRESSKNAANQRVLVETPTDXXXXXXXXXXXXXXXXXXXXXXXXXTGALPMAR 180

Query: 181 KASIQRFLEKRKDRMTARAPYQGIPTASKNAGDNSWLGLAVQP 224
           KASIQRFLEKRKDR+TARAPYQGIPTASKNAGDNSWLGLAVQP
Sbjct: 181 KASIQRFLEKRKDRLTARAPYQGIPTASKNAGDNSWLGLAVQP 223

[Close]

BLAST of Carg27603 vs. NCBI nr
Match: XP_023529884.1 (protein TIFY 10A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 368.6 bits (945), Expect = 1.5e-98
Identity = 211/223 (94.62%), Postives = 214/223 (95.96%), Query Frame = 0


Query: 1   MSSSSGFSRVSSQRSASNSPEKRGFVPVGGMLVSGGDLNTGFSACRRRKNGSAPEFFFQP 60
           MSSSSGFSRVSSQRSASNSPEKRGFVPVGGMLVSGGDLNTGFSACRRRKNGSAPEFF+QP
Sbjct: 1   MSSSSGFSRVSSQRSASNSPEKRGFVPVGGMLVSGGDLNTGFSACRRRKNGSAPEFFYQP 60

Query: 61  EKMVNRKSLDLFPQQAGFGVSNDVDSSVCKSVMAAPQTSQMTIFYAGRVFVFNNVPVDRV 120
           EKMVNRKSLDLFPQQAGFGVSNDVDSSVCKS MA PQTSQMTIFYAGRVFVFNNVPVDRV
Sbjct: 61  EKMVNRKSLDLFPQQAGFGVSNDVDSSVCKSAMAMPQTSQMTIFYAGRVFVFNNVPVDRV 120

Query: 121 GEVMFLAGRESSKNAANQRVLVETPTDXXXXXXXXXXXXXXXXXXXXXXXXXTGALPMAR 180
           GEVMFLAGRESSKNAA QRVL+ETP D    XXXXXXXXXXXXXXXXXXXXXTGALPMAR
Sbjct: 121 GEVMFLAGRESSKNAAGQRVLIETPADSLSSXXXXXXXXXXXXXXXXXXXXXTGALPMAR 180

Query: 181 KASIQRFLEKRKDRMTARAPYQGIPTASKNAGDNSWLGLAVQP 224
           KASIQRFLEKRKDR+TARAPYQGIPT SKNAGDNSWLGLAVQP
Sbjct: 181 KASIQRFLEKRKDRLTARAPYQGIPTGSKNAGDNSWLGLAVQP 223

[Close]

BLAST of Carg27603 vs. NCBI nr
Match: XP_022968174.1 (protein TIFY 10b-like [Cucurbita maxima])

HSP 1 Score: 352.8 bits (904), Expect = 8.4e-94
Identity = 207/227 (91.19%), Postives = 209/227 (92.07%), Query Frame = 0


Query: 1   MSSSSGFSRVSSQRSASNSPEKRGFVPVGGMLVSGGDLNTGFSACRRRKNGSAPEFFFQP 60
           MSSSSGFSRVSSQRSASNSPE RGFVPVGGMLVSGGDLNTGFSA R RKNGSAPEFF+QP
Sbjct: 1   MSSSSGFSRVSSQRSASNSPEMRGFVPVGGMLVSGGDLNTGFSAYRWRKNGSAPEFFYQP 60

Query: 61  EKMVNRKSLDLFPQQAGFGVSNDVDSSVCKSVMAAPQTSQMTIFYAGRVFVFNNVPVDRV 120
            KMVNRKSLDLFPQQAGFGVSNDVDSSVCKS MA PQTSQMTIFYAGRVFVFNNVPVDRV
Sbjct: 61  GKMVNRKSLDLFPQQAGFGVSNDVDSSVCKSAMATPQTSQMTIFYAGRVFVFNNVPVDRV 120

Query: 121 GEVMFLAGRESSKNAANQRVLVETPTDXXXXXXXXXXXXXXXXXXXXXXXXXTGALPMAR 180
           GEVMFLAGRESSKNAA QRVLVETP D      XXXXXXXXXXXXXXXXXXXTGALPMAR
Sbjct: 121 GEVMFLAGRESSKNAAGQRVLVETPADSLSSTSXXXXXXXXXXXXXXXXXXXTGALPMAR 180

Query: 181 KASIQRFLEKRKDRMTARAPYQGIPTASKN----AGDNSWLGLAVQP 224
           KASIQRFLEKRKDR+TARAPYQGIPTASKN    AGDNSWLGLAVQP
Sbjct: 181 KASIQRFLEKRKDRLTARAPYQGIPTASKNAGAGAGDNSWLGLAVQP 227

[Close]

BLAST of Carg27603 vs. NCBI nr
Match: XP_023516389.1 (protein TIFY 10a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 264.6 bits (675), Expect = 3.0e-67
Identity = 170/230 (73.91%), Postives = 184/230 (80.00%), Query Frame = 0


Query: 1   MSSSSGFSRVSSQRSASNSPEKRGFVPVGGMLVSGGDLNTGFSACRRRKNGSAPEFFFQP 60
           MS+SSGFS+VSS +    SPE  GF+P G MLVSG DLN GFSA  RR+NGSAPE F +P
Sbjct: 1   MSTSSGFSQVSSLK----SPENLGFLPAGAMLVSGEDLNLGFSANLRRRNGSAPELFHRP 60

Query: 61  EKMVNRKSLDLFPQQAGFGVSNDVDSSVCKSVMAAPQTSQMTIFYAGRVFVFNNVPVDRV 120
           EKM N KSLDLFPQ+AGFG+SNDV SSV KS  AAPQ SQMTIFYAG+VFVFNN P +RV
Sbjct: 61  EKMANLKSLDLFPQEAGFGISNDVVSSVYKSATAAPQASQMTIFYAGQVFVFNNFPAERV 120

Query: 121 GEVMFLAGRESSK-------NAANQRVLVETPTDXXXXXXXXXXXXXXXXXXXXXXXXXT 180
           GEVMFLAGRESSK        A+ Q +LV TP D   XXXXXXXXXXXXXXXXXXXXX T
Sbjct: 121 GEVMFLAGRESSKLNIPAATVASGQPILVGTPAD-SLXXXXXXXXXXXXXXXXXXXXXVT 180

Query: 181 GALPMARKASIQRFLEKRKDRMTARAPYQGIPTASKNAGDNSWLGLAVQP 224
           GALPMARKASIQRFLEKR+DR+T RAPYQ  P  SK AGDNSWLGLAVQP
Sbjct: 181 GALPMARKASIQRFLEKRRDRLTLRAPYQNYPAPSKLAGDNSWLGLAVQP 225

[Close]

BLAST of Carg27603 vs. NCBI nr
Match: XP_022960734.1 (protein TIFY 10a-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 259.6 bits (662), Expect = 9.7e-66
Identity = 165/230 (71.74%), Postives = 181/230 (78.70%), Query Frame = 0


Query: 1   MSSSSGFSRVSSQRSASNSPEKRGFVPVGGMLVSGGDLNTGFSACRRRKNGSAPEFFFQP 60
           MS+SSGFS+VSS +    SPE  GF+P   MLVSG +LN GFSA  RR+NGSAPE F +P
Sbjct: 1   MSTSSGFSQVSSLK----SPENLGFLPADAMLVSGEELNLGFSANLRRRNGSAPELFHRP 60

Query: 61  EKMVNRKSLDLFPQQAGFGVSNDVDSSVCKSVMAAPQTSQMTIFYAGRVFVFNNVPVDRV 120
           EKM N KSLDLFPQ+AGFG+SNDV SSV KS  AAPQ SQMTIFYAG+VFVFNN P +RV
Sbjct: 61  EKMANLKSLDLFPQEAGFGISNDVVSSVYKSATAAPQASQMTIFYAGQVFVFNNFPAERV 120

Query: 121 GEVMFLAGRESSK-------NAANQRVLVETPTDXXXXXXXXXXXXXXXXXXXXXXXXXT 180
           GEVMF+AGRESSK        A+ Q +LV TP D     XXXXXXXXXXXXXXXXXXX T
Sbjct: 121 GEVMFIAGRESSKLNIPATAVASGQPILVGTPAD-SLSSXXXXXXXXXXXXXXXXXXXVT 180

Query: 181 GALPMARKASIQRFLEKRKDRMTARAPYQGIPTASKNAGDNSWLGLAVQP 224
           GALPMARKASIQRFLEKR+DR+T RAPYQ  P  SK AGDNSWLGLAVQP
Sbjct: 181 GALPMARKASIQRFLEKRRDRLTLRAPYQNCPAPSKLAGDNSWLGLAVQP 225

[Close]

BLAST of Carg27603 vs. TAIR10
Match: AT1G19180.1 (jasmonate-zim-domain protein 1)

HSP 1 Score: 82.8 bits (203), Expect = 2.9e-16
Identity = 57/169 (33.73%), Postives = 85/169 (50.30%), Query Frame = 0


Query: 67  KSLDLFPQQAGFGVSN------DV--DSSVCKSVMAAPQTSQMTIFYAGRVFVFNNVPVD 126
           K  +LFP+Q  F  S+      DV   +   +SV    QT+ +TIFYAG+V VFN+   +
Sbjct: 85  KPTNLFPRQPSFSSSSSSLPKEDVLKMTQTTRSVKPESQTAPLTIFYAGQVIVFNDFSAE 144

Query: 127 RVGEVMFLAGRESSKNAANQRVLVETPTDXXXXXXXXXXXXXXXXXXXXXXXXXTGALPM 186
           +  EV+ LA + ++ + A  +  + +                            T  LP+
Sbjct: 145 KAKEVINLASKGTANSLAKNQTDIRSNIATIANQVPHPRKTTTQEPIQSSPTPLT-ELPI 204

Query: 187 ARKASIQRFLEKRKDRMTARAPYQGIPTAS-----KNAGDNSWLGLAVQ 223
           AR+AS+ RFLEKRKDR+T++APYQ    A      +  G+ SWLGLA +
Sbjct: 205 ARRASLHRFLEKRKDRVTSKAPYQLCDPAKASSNPQTTGNMSWLGLAAE 252

[Close]

BLAST of Carg27603 vs. TAIR10
Match: AT1G74950.1 (TIFY domain/Divergent CCT motif family protein)

HSP 1 Score: 74.3 bits (181), Expect = 1.0e-13
Identity = 57/185 (30.81%), Postives = 86/185 (46.49%), Query Frame = 0


Query: 50  NGSAPEFFFQPEKMVNRKSLDLFPQQAGFGVSNDVD--SSVCKSVMAAPQTSQMTIFYAG 109
           + SA +   +P+ M  R+S   F   +  G   DV       KSV    Q++ +TIFY G
Sbjct: 69  DSSAGQEDIKPKTMFPRQS--SFSSSSSSGTKEDVQMIKETTKSVKPESQSAPLTIFYGG 128

Query: 110 RVFVFNNVPVDRVGEVMFLAGRESSK-------------NAANQRVLVETPTDXXXXXXX 169
           RV VF++   ++  EV+ LA + S+K             +A +Q+ +  +P         
Sbjct: 129 RVMVFDDFSAEKAKEVIDLANKGSAKSFTCFTAEVNNNHSAYSQKEIASSPNPVCSPAKT 188

Query: 170 XXXXXXXXXXXXXXXXXXTGALPMARKASIQRFLEKRKDRMTARAPYQ--GIPTASKNAG 218
                                LP+AR+AS+ RFLEKRKDR+T++APYQ  G   AS    
Sbjct: 189 AAQEPIQPNPASLAC-----ELPIARRASLHRFLEKRKDRITSKAPYQIDGSAEASSKPT 246

[Close]

BLAST of Carg27603 vs. TAIR10
Match: AT1G17380.1 (jasmonate-zim-domain protein 5)

HSP 1 Score: 56.2 bits (134), Expect = 2.9e-08
Identity = 63/131 (48.09%), Postives = 82/131 (62.60%), Query Frame = 0


Query: 96  PQTSQMTIFYAGRVFVFNNVPVDRVGEVMFLAGRESSKNAANQRVLVETPTDXXXXXXXX 155
           P +SQ+TIF+ G+V V+N  PVD+  E+M +A +       N    ++TP + XXXXXXX
Sbjct: 94  PGSSQLTIFFGGKVLVYNEFPVDKAKEIMEVAKQAKPVTEIN----IQTPINDXXXXXXX 153

Query: 156 XXXXXXXXXXXXXXXXXTGALP----------MARKASIQRFLEKRKDRMTARAPYQGIP 215
           XXXXXXXXXXXXXXXXX               +AR+AS+ RF  KRKDR  ARAPYQ   
Sbjct: 154 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXVERIARRASLHRFFAKRKDRAVARAPYQ--- 213

Query: 216 TASKNAGDNSW 217
             ++NAG + +
Sbjct: 214 -VNQNAGHHRY 216

[Close]

BLAST of Carg27603 vs. TAIR10
Match: AT5G20900.1 (jasmonate-zim-domain protein 12)

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07
Identity = 34/125 (27.20%), Postives = 57/125 (45.60%), Query Frame = 0


Query: 82  NDVDSSVCKSVMAAPQTSQMTIFYAGRVFVFNNVPVDRVGEVMFLAGRESSKNAANQRVL 141
           N+V S+  ++       +Q+TIF+ G V VF+ +P ++V E++ +A +      +     
Sbjct: 39  NEVRSTEIQTAEPTVPPNQLTIFFGGSVTVFDGLPSEKVQEILRIAAKAMETKNSTSISP 98

Query: 142 VETPT-----DXXXXXXXXXXXXXXXXXXXXXXXXXTGALPMARKASIQRFLEKRKDRMT 201
           V +P                                T  LP+AR+ S+QRFLEKR+DR+ 
Sbjct: 99  VSSPALNRAPSFSSTSNVASPAAQPFPIQPISFCRSTADLPIARRHSLQRFLEKRRDRLV 158

[Close]

BLAST of Carg27603 vs. TAIR10
Match: AT1G72450.1 (jasmonate-zim-domain protein 6)

HSP 1 Score: 52.8 bits (125), Expect = 3.3e-07
Identity = 36/121 (29.75%), Postives = 51/121 (42.15%), Query Frame = 0


Query: 84  VDSSVCKSVMAAPQTSQMTIFYAGRVFVFNNVPVDRVGEVMFLA--GRESSKNAANQRVL 143
           +D S    V      SQ+TIF+ G+V VFN  P D+  E+M +A      + ++ N +  
Sbjct: 90  IDLSEPAKVAPESGNSQLTIFFGGKVMVFNEFPEDKAKEIMEVAKEANHVAVDSKNSQSH 149

Query: 144 VETPTDXXXXXXXXXXXXXXXXXXXXXXXXXTGALPMARKASIQRFLEKRKDRMTARAPY 203
           +                                   +AR+AS+ RF  KRKDR  ARAPY
Sbjct: 150 MNLDKSNVVIPDLNEPTSSGNNEDQETGQQHQVVERIARRASLHRFFAKRKDRAVARAPY 209

[Close]

BLAST of Carg27603 vs. Swiss-Prot
Match: sp|A2YNP2|TI10B_ORYSI (Protein TIFY 10b OS=Oryza sativa subsp. indica OX=39946 GN=TIFY10B PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.8e-16
Identity = 77/166 (46.39%), Postives = 101/166 (60.84%), Query Frame = 0


Query: 66  RKSLDLFPQQAGFGVSNDVDS-SVCKSVMAAPQTSQMTIFYAGRVFVFNNVPVDRVGEVM 125
           +++++LFPQ AGFG  + + + S   +    P+  Q+TIFY G+V VFN+ P D+   +M
Sbjct: 68  KETMELFPQSAGFGQQDAITADSAADAREQEPEKRQLTIFYGGKVLVFNDFPADKAKGLM 127

Query: 126 FLAGRESSKNAANQRVLVETP---TDXXXXXXXXXXXXXXXXXXXXXXXXXTGA----LP 185
            LA + S+   A Q  +   P   TD     XXXXXXXXXXXXXXXXXXXX  A    +P
Sbjct: 128 QLASKGST--VAPQNAVAPAPAAVTDNTKAPXXXXXXXXXXXXXXXXXXXXXRANASDMP 187

Query: 186 MARKASIQRFLEKRKDRMTARAPYQGIPT----ASKNAGDNSWLGL 220
           +ARKAS+ RFLEKRKDR+ A+ PYQ  P+      K      WLGL
Sbjct: 188 IARKASLHRFLEKRKDRLNAKTPYQASPSDATPVKKEPESQPWLGL 231

[Close]

BLAST of Carg27603 vs. Swiss-Prot
Match: sp|Q8H395|TI10B_ORYSJ (Protein TIFY 10b OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY10B PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 4.8e-16
Identity = 56/164 (34.15%), Postives = 79/164 (48.17%), Query Frame = 0


Query: 66  RKSLDLFPQQAGFGVSNDVDS-SVCKSVMAAPQTSQMTIFYAGRVFVFNNVPVDRVGEVM 125
           +++++LFPQ AGFG  + + + S   +    P+  Q+TIFY G+V VFN+ P D+   +M
Sbjct: 68  KETMELFPQSAGFGQQDAITADSAADAREQEPEKRQLTIFYGGKVLVFNDFPADKAKGLM 127

Query: 126 FLAGRES---SKNAANQRVLVETPTDXXXXXXXXXXXXXXXXXXXXXXXXXTGA--LPMA 185
            LA + S    +NAA       T                              A  +P+A
Sbjct: 128 QLASKGSPVAPQNAAAPAPAAVTDNTKAPMAVPAPVSSLPTAQADAQKPARANASDMPIA 187

Query: 186 RKASIQRFLEKRKDRMTARAPYQGIPT----ASKNAGDNSWLGL 220
           RKAS+ RFLEKRKDR+ A+ PYQ  P+      K      WLGL
Sbjct: 188 RKASLHRFLEKRKDRLNAKTPYQASPSDATPVKKEPESQPWLGL 231

[Close]

BLAST of Carg27603 vs. Swiss-Prot
Match: sp|Q9LMA8|TI10A_ARATH (Protein TIFY 10A OS=Arabidopsis thaliana OX=3702 GN=TIFY10A PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.3e-15
Identity = 57/169 (33.73%), Postives = 85/169 (50.30%), Query Frame = 0


Query: 67  KSLDLFPQQAGFGVSN------DV--DSSVCKSVMAAPQTSQMTIFYAGRVFVFNNVPVD 126
           K  +LFP+Q  F  S+      DV   +   +SV    QT+ +TIFYAG+V VFN+   +
Sbjct: 85  KPTNLFPRQPSFSSSSSSLPKEDVLKMTQTTRSVKPESQTAPLTIFYAGQVIVFNDFSAE 144

Query: 127 RVGEVMFLAGRESSKNAANQRVLVETPTDXXXXXXXXXXXXXXXXXXXXXXXXXTGALPM 186
           +  EV+ LA + ++ + A  +  + +                            T  LP+
Sbjct: 145 KAKEVINLASKGTANSLAKNQTDIRSNIATIANQVPHPRKTTTQEPIQSSPTPLT-ELPI 204

Query: 187 ARKASIQRFLEKRKDRMTARAPYQGIPTAS-----KNAGDNSWLGLAVQ 223
           AR+AS+ RFLEKRKDR+T++APYQ    A      +  G+ SWLGLA +
Sbjct: 205 ARRASLHRFLEKRKDRVTSKAPYQLCDPAKASSNPQTTGNMSWLGLAAE 252

[Close]

BLAST of Carg27603 vs. Swiss-Prot
Match: sp|Q84R94|TI10A_ORYSJ (Protein TIFY 10a OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY10A PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.8e-14
Identity = 53/170 (31.18%), Postives = 80/170 (47.06%), Query Frame = 0


Query: 66  RKSLDLFPQQAGFGVSNDVDSSVCKSVMAA--PQTSQMTIFYAGRVFVFNNVPVDRVGEV 125
           +++++LFPQ +GFG     +++  K    A   +  Q+TIFY G+V VF++ P ++  ++
Sbjct: 49  KETMELFPQNSGFG----SEAAAVKETPDAREQEKRQLTIFYGGKVLVFDDFPAEKAKDL 108

Query: 126 MFLAGRESSKN------AANQRVLVETPTDXXXXXXXXXXXXXXXXXXXXXXXXXTGALP 185
           M +A + SS         ++    V   T                             LP
Sbjct: 109 MQMASKSSSTAQNCVLLPSSATATVADNTKVSAVPAPASALPVAQANAPKPVRPNAADLP 168

Query: 186 MARKASIQRFLEKRKDRMTARAPYQGIPTASKNA-----GDNSWLGLAVQ 223
            ARKAS+ RFLEKRKDR+ A+APYQG P+ +            WLGL  Q
Sbjct: 169 QARKASLHRFLEKRKDRLQAKAPYQGSPSDASPVKKELQESQPWLGLGPQ 214

[Close]

BLAST of Carg27603 vs. Swiss-Prot
Match: sp|Q9S7M2|TI10B_ARATH (Protein TIFY 10B OS=Arabidopsis thaliana OX=3702 GN=TIFY10B PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.9e-12
Identity = 57/185 (30.81%), Postives = 86/185 (46.49%), Query Frame = 0


Query: 50  NGSAPEFFFQPEKMVNRKSLDLFPQQAGFGVSNDVD--SSVCKSVMAAPQTSQMTIFYAG 109
           + SA +   +P+ M  R+S   F   +  G   DV       KSV    Q++ +TIFY G
Sbjct: 69  DSSAGQEDIKPKTMFPRQS--SFSSSSSSGTKEDVQMIKETTKSVKPESQSAPLTIFYGG 128

Query: 110 RVFVFNNVPVDRVGEVMFLAGRESSK-------------NAANQRVLVETPTDXXXXXXX 169
           RV VF++   ++  EV+ LA + S+K             +A +Q+ +  +P         
Sbjct: 129 RVMVFDDFSAEKAKEVIDLANKGSAKSFTCFTAEVNNNHSAYSQKEIASSPNPVCSPAKT 188

Query: 170 XXXXXXXXXXXXXXXXXXTGALPMARKASIQRFLEKRKDRMTARAPYQ--GIPTASKNAG 218
                                LP+AR+AS+ RFLEKRKDR+T++APYQ  G   AS    
Sbjct: 189 AAQEPIQPNPASLAC-----ELPIARRASLHRFLEKRKDRITSKAPYQIDGSAEASSKPT 246

[Close]

BLAST of Carg27603 vs. TrEMBL
Match: tr|A0A0A0LZM2|A0A0A0LZM2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597690 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.5e-62
Identity = 152/229 (66.38%), Postives = 169/229 (73.80%), Query Frame = 0


Query: 1   MSSSSGFSRVSSQRSASNSPEKRGFVPVGGMLVSGGDLNTGFSACRRRKNGSAPEFFFQP 60
           MS+SSGFS++SS RS SNSP+   F+P+  ML+S  DLN GFS   RR NGS PEFF  P
Sbjct: 1   MSTSSGFSQISSHRSISNSPDNLAFLPLHPMLLSPTDLNLGFSPNLRRTNGSVPEFFNSP 60

Query: 61  EKMVNRKSLDLFPQQAGFGVSNDVDSSVCKSVMAAPQTSQMTIFYAGRVFVFNNVPVDRV 120
           EKM +RKSLDLFPQ+AGFG SNDVDS V KSV AAPQTSQMTIFYAG+VFVFNN+P DRV
Sbjct: 61  EKMADRKSLDLFPQEAGFGNSNDVDSRVYKSVTAAPQTSQMTIFYAGQVFVFNNIPADRV 120

Query: 121 GEVMFLAGRESSK------NAANQRVLVETPTDXXXXXXXXXXXXXXXXXXXXXXXXXTG 180
           G+VMFLA +ESS+       A    +LV TP D            XXXXXXXXXXXX  G
Sbjct: 121 GDVMFLASQESSRLNIPTVAARQPPILVGTPAD-SLSSTSPVPTRXXXXXXXXXXXXVPG 180

Query: 181 ALPMARKASIQRFLEKRKDRMTARAPYQ-GIPTASKNAGDNSWLGLAVQ 223
           ALPMARKASIQRFLEKRKDR+T R PYQ   P  SK  G+NSWLGLAVQ
Sbjct: 181 ALPMARKASIQRFLEKRKDRLTPRTPYQSSSPVTSKKTGENSWLGLAVQ 228

[Close]

BLAST of Carg27603 vs. TrEMBL
Match: tr|A0A1S3BPU0|A0A1S3BPU0_CUCME (protein TIFY 10a OS=Cucumis melo OX=3656 GN=LOC103492387 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.3e-54
Identity = 144/232 (62.07%), Postives = 160/232 (68.97%), Query Frame = 0


Query: 1   MSSSSGFSRVSSQRSASNSPEKRGFVPVGGMLVSGGDLNTGFSACRRRKNGSAPEFFFQP 60
           MSSSSGFS +SSQRS SNS E   F+P+  +L+S    N GFSA  R   G+        
Sbjct: 1   MSSSSGFSHISSQRSLSNSSENLPFLPLPPILLSPSHFNLGFSANLRPTKGNL------T 60

Query: 61  EKMVNRKSLDLFPQQAGFGVSNDVDSSVCKSVMAAPQTSQMTIFYAGRVFVFNNVPVDRV 120
           EKM +RKSLDLFPQ+AGFG SNDVDS V KS  A PQTSQMTIFYAG+VFVFNN P DRV
Sbjct: 61  EKMADRKSLDLFPQEAGFGNSNDVDSRVYKSATAGPQTSQMTIFYAGQVFVFNNFPADRV 120

Query: 121 GEVMFLAGRESSK---------NAANQRVLVETPTDXXXXXXXXXXXXXXXXXXXXXXXX 180
           G+VMFLA +ESS+          A    +LV TP D           XXXXXXXXXXXXX
Sbjct: 121 GDVMFLASQESSRLNIPTTASVAARQPPILVGTPADSLSSTSPVSTRXXXXXXXXXXXXX 180

Query: 181 XTGALPMARKASIQRFLEKRKDRMTARAPY-QGIPTASKNAGDNSWLGLAVQ 223
             GALPMARKASIQRFLEKRKDR+T RAPY    P  SKN+G+NSWLGLAVQ
Sbjct: 181 VPGALPMARKASIQRFLEKRKDRLTPRAPYHNSSPMTSKNSGENSWLGLAVQ 226

[Close]

BLAST of Carg27603 vs. TrEMBL
Match: tr|Q8VWX4|Q8VWX4_CUCSA (Uncharacterized protein (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.0e-43
Identity = 99/152 (65.13%), Postives = 115/152 (75.66%), Query Frame = 0


Query: 2   SSSSGFSRVSSQRSASNSPEKRGFVPVGGMLVSGGDLNTGFSACRRRKNGSAPEFFFQPE 61
           ++SSGFS++SS RS SNSP+   F+P+  ML+S  DLN GFS   RR NGS PEFF  PE
Sbjct: 3   ATSSGFSQISSHRSISNSPDNLAFLPLHPMLLSPTDLNLGFSPNLRRTNGSVPEFFNSPE 62

Query: 62  KMVNRKSLDLFPQQAGFGVSNDVDSSVCKSVMAAPQTSQMTIFYAGRVFVFNNVPVDRVG 121
           KM +RKSLDLFPQ+AGFG SNDVDS V KSV AAPQTSQMTIFYAG+VFVFNN+P DRVG
Sbjct: 63  KMADRKSLDLFPQEAGFGNSNDVDSRVYKSVTAAPQTSQMTIFYAGQVFVFNNIPADRVG 122

Query: 122 EVMFLAGRESSK------NAANQRVLVETPTD 148
           +VMFLA +ESS+       A    +LV TP D
Sbjct: 123 DVMFLASQESSRLNIPTVAARQPPILVGTPAD 154

[Close]

BLAST of Carg27603 vs. TrEMBL
Match: tr|H2BDK2|H2BDK2_PRUPE (Jasmonate-zim-domain protein 1 OS=Prunus persica OX=3760 GN=JAZ1 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 6.0e-24
Identity = 104/276 (37.68%), Postives = 126/276 (45.65%), Query Frame = 0


Query: 1   MSSSSGFSRVSSQRSASNSPEKRGFVPVGGMLV-------SGGDLNTGFSACRRRKNGS- 60
           MSSSS    VS QR    + +   F     ML        S GDL+   +   ++ NG+ 
Sbjct: 1   MSSSSETLEVSGQRGLRMAEKPSSFTQTCSMLCQYLKEKGSFGDLSLDMACNMQQSNGTG 60

Query: 61  APEFFFQPEKMVN-----------------RKSLDLFPQQAGFGVS---NDV----DSSV 120
            PE F Q    VN                  KS+DLFPQQAGFG S    DV    DSSV
Sbjct: 61  TPEMFHQKAPPVNFFPFMENSRNLPATPGDFKSMDLFPQQAGFGSSVPRGDVPKMADSSV 120

Query: 121 CKSVMAAPQTSQMTIFYAGRVFVFNNVPVDRVGEVMFLAGRESSKNAANQRV-------- 180
            KSV   PQ +QMTIFY G+V VF++ P D+  EVM LA +ESS + A Q          
Sbjct: 121 KKSVPGEPQKAQMTIFYGGQVIVFDDFPADKAKEVMLLASKESSHSQAAQASIPAKSNNV 180

Query: 181 ----LVETPTDXXXXXXXXXXXXXXXXXXXXXXXXXTGA------LPMARKASIQRFLEK 224
               L + P +                                  LP+ARKAS+ RFLEK
Sbjct: 181 FASHLGKNPMNSSSSVPPSANMFPKFGNQVIQEAPKPSPQPIVCDLPIARKASLHRFLEK 240

[Close]

BLAST of Carg27603 vs. TrEMBL
Match: tr|F6HGN3|F6HGN3_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g00710 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 2.3e-23
Identity = 104/270 (38.52%), Postives = 128/270 (47.41%), Query Frame = 0


Query: 1   MSSSSGFS---RVSSQRSASNSPEKRGFVPVGGMLV-------SGGDLNTGFSACRRRKN 60
           MSSSS  +   R + QR+ +  PEK  F     +L        + GDL+ G + C    N
Sbjct: 1   MSSSSDIADSGRFTGQRAPARGPEKSSFSQTCSLLSQYIKEKGTFGDLSLGMT-CSLEGN 60

Query: 61  GSAPEFFFQ----------------------PEKMVNRKSLDLFPQQAGFG--VSND--- 120
           G+ PE   Q                      P + +N KS++LFPQQAGFG  VS D   
Sbjct: 61  GT-PESLRQTATTTTMNLFPMTERSAGVSGIPARNMNLKSMNLFPQQAGFGSSVSKDDAP 120

Query: 121 --VDSSVCKSVMAAPQTSQMTIFYAGRVFVFNNVPVDRVGEVMFLAGRESSKNAANQRVL 180
             V+SSV KS    PQT+QMTIFY G+V VFN+ P D+  EVM LAG  SS   +     
Sbjct: 121 KIVNSSVKKSGNVEPQTAQMTIFYGGQVIVFNDFPADKAKEVMRLAGMGSSPVPS---TT 180

Query: 181 VETPTDXXXXXXXXXXXXXXXXXXXXXXXXXTGA------LPMARKASIQRFLEKRKDRM 223
           V+ P D                           A      LP+ARKAS+ RFLEKRKDR+
Sbjct: 181 VKNPIDAGGMAPSNPNVVPNFANSLIQERIQRPAQPVACELPIARKASLHRFLEKRKDRI 240

The following BLAST results are available for this feature:

BLAST of Carg27603 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925649.1	2.4e-101	99.10	protein TIFY 10A-like [Cucurbita moschata]	[more]
XP_023529884.1	1.5e-98	94.62	protein TIFY 10A-like [Cucurbita pepo subsp. pepo]	[more]
XP_022968174.1	8.4e-94	91.19	protein TIFY 10b-like [Cucurbita maxima]	[more]
XP_023516389.1	3.0e-67	73.91	protein TIFY 10a-like [Cucurbita pepo subsp. pepo]	[more]
XP_022960734.1	9.7e-66	71.74	protein TIFY 10a-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Carg27603 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G19180.1	2.9e-16	33.73	jasmonate-zim-domain protein 1	[more]
AT1G74950.1	1.0e-13	30.81	TIFY domain/Divergent CCT motif family protein	[more]
AT1G17380.1	2.9e-08	48.09	jasmonate-zim-domain protein 5	[more]
AT5G20900.1	1.1e-07	27.20	jasmonate-zim-domain protein 12	[more]
AT1G72450.1	3.3e-07	29.75	jasmonate-zim-domain protein 6	[more]

BLAST of Carg27603 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A2YNP2\|TI10B_ORYSI	4.8e-16	46.39	Protein TIFY 10b OS=Oryza sativa subsp. indica OX=39946 GN=TIFY10B PE=3 SV=1	[more]
sp\|Q8H395\|TI10B_ORYSJ	4.8e-16	34.15	Protein TIFY 10b OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY10B PE=1 SV=1	[more]
sp\|Q9LMA8\|TI10A_ARATH	5.3e-15	33.73	Protein TIFY 10A OS=Arabidopsis thaliana OX=3702 GN=TIFY10A PE=1 SV=1	[more]
sp\|Q84R94\|TI10A_ORYSJ	5.8e-14	31.18	Protein TIFY 10a OS=Oryza sativa subsp. japonica OX=39947 GN=TIFY10A PE=1 SV=1	[more]
sp\|Q9S7M2\|TI10B_ARATH	1.9e-12	30.81	Protein TIFY 10B OS=Arabidopsis thaliana OX=3702 GN=TIFY10B PE=1 SV=1	[more]

BLAST of Carg27603 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LZM2\|A0A0A0LZM2_CUCSA	2.5e-62	66.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G597690 PE=4 SV=1	[more]
tr\|A0A1S3BPU0\|A0A1S3BPU0_CUCME	3.3e-54	62.07	protein TIFY 10a OS=Cucumis melo OX=3656 GN=LOC103492387 PE=4 SV=1	[more]
tr\|Q8VWX4\|Q8VWX4_CUCSA	2.0e-43	65.13	Uncharacterized protein (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1	[more]
tr\|H2BDK2\|H2BDK2_PRUPE	6.0e-24	37.68	Jasmonate-zim-domain protein 1 OS=Prunus persica OX=3760 GN=JAZ1 PE=2 SV=1	[more]
tr\|F6HGN3\|F6HGN3_VITVI	2.3e-23	38.52	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_11s0016g00710 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018467	CCT_CS
IPR010399	Tify_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27603-RA	Carg27603-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010399	Tify domain	SMART	SM00979	tify_2	coord: 94..129 e-value: 8.1E-11 score: 51.9
IPR010399	Tify domain	PFAM	PF06200	tify	coord: 96..128 e-value: 2.6E-14 score: 52.1
IPR010399	Tify domain	PROSITE	PS51320	TIFY	coord: 94..129 score: 15.789
IPR018467	CO/COL/TOC1, conserved site	PFAM	PF09425	CCT_2	coord: 177..202 e-value: 1.2E-13 score: 50.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 158..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..157
None	No IPR available	PANTHER	PTHR33077	FAMILY NOT NAMED	coord: 30..207

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27603	Cla011143	Watermelon (97103) v1	carwmB0646
Carg27603	Csa1G597690	Cucumber (Chinese Long) v2	carcuB0667
Carg27603	MELO3C015538	Melon (DHL92) v3.5.1	carmeB0646
Carg27603	ClCG03G014890	Watermelon (Charleston Gray)	carwcgB0629
Carg27603	CSPI01G28890	Wild cucumber (PI 183967)	carcpiB0676
Carg27603	Cucsa.141940	Cucumber (Gy14) v1	carcgyB0722
Carg27603	CmaCh11G007480	Cucurbita maxima (Rimu)	carcmaB0917
Carg27603	Lsi06G003540	Bottle gourd (USVL1VR-Ls)	carlsiB591
Carg27603	Cp4.1LG04g11060	Cucurbita pepo (Zucchini)	carcpeB0921
Carg27603	MELO3C015538.2	Melon (DHL92) v3.6.1	carmedB0656
Carg27603	CsaV3_1G041270	Cucumber (Chinese Long) v3	carcucB0678
Carg27603	Cla97C03G065120	Watermelon (97103) v2	carwmbB0675
Carg27603	Bhi02G001492	Wax gourd	carwgoB0762

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None