Carg27582 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27582
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Inosine/uridine-preferring nucleoside hydrolase
Location	Cucurbita_argyrosperma_scaffold_313 : 109703 .. 110425 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGCAGGGGTTTACCTCCATGATCCAGCAACTGTGGTAGCGGCTGTCGATCCCTCACTTTTCACGTACACAGAGGGCGTAGTTCGAGTCCAGACAACGGGCATTTCAAGAGGACTCACAATTTTGTACAACAATAAGAAAAGGTAAATGTATTTGGGTTACCTACTTCCCCAGCTTACCAGTATTTTTTTACAACAATCAGGTAATTGTGGTTAATATGGAACTAACCAGGTTTGGTGAAGTGAGTGAATGGTGTGATAAACCCACCGTGAAGGTGGCGGTCACAGTGGATGCCCCGGCCGTTGTGAAATTGGTGATGGACCGACTTATCGACTCGTAGAGTATATATAAAAGTTGCAATAAGGAATTCCTTCCATAATATGGAATGGAATGTTTTATATCCCAGTCCTTCATCTTTGTGTTGTTTTTCTTCTGTTATGAATGATTTCGCTTGTGATAATGAGAATGGGTTTAGGATCATTTTGTTTGCCGAGAGTAATATCTCTTAGAAGGCAATCAGAATTGAATTCTTGGCTTAATAGGTAATACACTGCAACTAAGTAGCAACACAACCTTTTCCTTAGAAGCAGAACATGTACACATCAAAGAATGCACATGCGCATAAGCTAAGTACGAGTGTTTCAAAACAAAATGGTGTATGTGTTTTCGAGAAATGAGTTTAAGATGGAAAAAACTTTGGCCCTCCCTATTCTTCTTGTT

mRNA sequence

ATGCATGCAGGGGTTTACCTCCATGATCCAGCAACTGTGGTAGCGGCTGTCGATCCCTCACTTTTCACGTACACAGAGGGCGTAGTTCGAGTCCAGACAACGGGCATTTCAAGAGGACTCACAATTTTGTACAACAATAAGAAAAGGTTTGGTGAAGTGAGTGAATGGTGTGATAAACCCACCGTGAAGGTGGCGGTCACAGTGGATGCCCCGGCCGTTGTGAAATTGGTGATGGACCGACTTATCGACTCGTAGAGTATATATAAAAGTTGCAATAAGGAATTCCTTCCATAATATGGAATGGAATGTTTTATATCCCAGTCCTTCATCTTTGTGTTGTTTTTCTTCTGTTATGAATGATTTCGCTTGTGATAATGAGAATGGGTTTAGGATCATTTTGTTTGCCGAGAGTAATATCTCTTAGAAGGCAATCAGAATTGAATTCTTGGCTTAATAGGTAATACACTGCAACTAAGTAGCAACACAACCTTTTCCTTAGAAGCAGAACATGTACACATCAAAGAATGCACATGCGCATAAGCTAAGTACGAGTGTTTCAAAACAAAATGGTGTATGTGTTTTCGAGAAATGAGTTTAAGATGGAAAAAACTTTGGCCCTCCCTATTCTTCTTGTT

Coding sequence (CDS)

ATGCATGCAGGGGTTTACCTCCATGATCCAGCAACTGTGGTAGCGGCTGTCGATCCCTCACTTTTCACGTACACAGAGGGCGTAGTTCGAGTCCAGACAACGGGCATTTCAAGAGGACTCACAATTTTGTACAACAATAAGAAAAGGTTTGGTGAAGTGAGTGAATGGTGTGATAAACCCACCGTGAAGGTGGCGGTCACAGTGGATGCCCCGGCCGTTGTGAAATTGGTGATGGACCGACTTATCGACTCGTAG

Protein sequence

MHAGVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVKVAVTVDAPAVVKLVMDRLIDS

Homology

[Close]

BLAST of Carg27582 vs. NCBI nr
Match: XP_022929936.1 (probable uridine nucleosidase 2, partial [Cucurbita moschata])

HSP 1 Score: 161.8 bits (408), Expect = 1.0e-36
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 4   GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 63
           GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK
Sbjct: 69  GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 128

Query: 64  VAVTVDAPAVVKLVMDRLIDS 85
           VAVTVDAPAV+KLVMDRLIDS
Sbjct: 129 VAVTVDAPAVLKLVMDRLIDS 149

[Close]

BLAST of Carg27582 vs. NCBI nr
Match: XP_022930096.1 (probable uridine nucleosidase 2 [Cucurbita moschata])

HSP 1 Score: 161.8 bits (408), Expect = 1.0e-36
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 4   GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 63
           GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK
Sbjct: 241 GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 300

Query: 64  VAVTVDAPAVVKLVMDRLIDS 85
           VAVTVDAPAV+KLVMDRLIDS
Sbjct: 301 VAVTVDAPAVLKLVMDRLIDS 321

[Close]

BLAST of Carg27582 vs. NCBI nr
Match: XP_023536058.1 (probable uridine nucleosidase 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 161.8 bits (408), Expect = 1.0e-36
Identity = 80/81 (98.77%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 4   GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 63
           GVYLHDPATV+AAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK
Sbjct: 241 GVYLHDPATVLAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 300

Query: 64  VAVTVDAPAVVKLVMDRLIDS 85
           VAVTVDAPAVVKLVMDRLIDS
Sbjct: 301 VAVTVDAPAVVKLVMDRLIDS 321

[Close]

BLAST of Carg27582 vs. NCBI nr
Match: XP_022974001.1 (probable uridine nucleosidase 2 [Cucurbita maxima])

HSP 1 Score: 160.6 bits (405), Expect = 2.3e-36
Identity = 79/81 (97.53%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 4   GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 63
           GVYLHDPATV+AAVDPSLFTYTEGVVRVQTTGI+RGLTILYNNKKRFGEVSEWCDKPTVK
Sbjct: 241 GVYLHDPATVLAAVDPSLFTYTEGVVRVQTTGITRGLTILYNNKKRFGEVSEWCDKPTVK 300

Query: 64  VAVTVDAPAVVKLVMDRLIDS 85
           VAVTVDAPAVVKLVMDRLIDS
Sbjct: 301 VAVTVDAPAVVKLVMDRLIDS 321

[Close]

BLAST of Carg27582 vs. NCBI nr
Match: XP_022974013.1 (probable uridine nucleosidase 2 [Cucurbita maxima])

HSP 1 Score: 159.1 bits (401), Expect = 6.7e-36
Identity = 78/81 (96.30%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 4   GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 63
           GVYLHDPATV+AAVDPSLFTYTEGVVRVQTTGI+RGLTILYNNKKRFGEVSEWCDKPTVK
Sbjct: 241 GVYLHDPATVLAAVDPSLFTYTEGVVRVQTTGITRGLTILYNNKKRFGEVSEWCDKPTVK 300

Query: 64  VAVTVDAPAVVKLVMDRLIDS 85
           VAVTVDAPAV KLVMDRLIDS
Sbjct: 301 VAVTVDAPAVAKLVMDRLIDS 321

[Close]

BLAST of Carg27582 vs. TAIR10
Match: AT1G05620.1 (uridine-ribohydrolase 2)

HSP 1 Score: 135.2 bits (339), Expect = 1.9e-32
Identity = 65/81 (80.25%), Postives = 74/81 (91.36%), Query Frame = 0


Query: 4   GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 63
           GVYLHDPAT++AA  PSLFTYTEGV RVQT+GI+RGLT+LYNN KRF E +EW DKPTVK
Sbjct: 242 GVYLHDPATILAAFLPSLFTYTEGVARVQTSGITRGLTLLYNNLKRFEEANEWSDKPTVK 301

Query: 64  VAVTVDAPAVVKLVMDRLIDS 85
           VAVTVDAPAVVKL+MDRL++S
Sbjct: 302 VAVTVDAPAVVKLIMDRLMES 322

[Close]

BLAST of Carg27582 vs. TAIR10
Match: AT2G36310.1 (uridine-ribohydrolase 1)

HSP 1 Score: 68.9 bits (167), Expect = 1.7e-12
Identity = 36/79 (45.57%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 4   GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 63
           GVYLHDP + VA V P LFTY +GVVRV+T GI  G T++    KR+   + W     + 
Sbjct: 256 GVYLHDPVSFVAVVRPDLFTYKKGVVRVETQGICVGHTLMDQGLKRWNGSNPWVGYSPIS 315

Query: 64  VAVTVDAPAVVKLVMDRLI 83
           VA TVD   V++ V  +L+
Sbjct: 316 VAWTVDVEGVLEYVKAKLM 334

[Close]

BLAST of Carg27582 vs. Swiss-Prot
Match: sp|Q8LAC4|URH2_ARATH (Probable uridine nucleosidase 2 OS=Arabidopsis thaliana OX=3702 GN=URH2 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.4e-31
Identity = 65/81 (80.25%), Postives = 74/81 (91.36%), Query Frame = 0


Query: 4   GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 63
           GVYLHDPAT++AA  PSLFTYTEGV RVQT+GI+RGLT+LYNN KRF E +EW DKPTVK
Sbjct: 242 GVYLHDPATILAAFLPSLFTYTEGVARVQTSGITRGLTLLYNNLKRFEEANEWSDKPTVK 301

Query: 64  VAVTVDAPAVVKLVMDRLIDS 85
           VAVTVDAPAVVKL+MDRL++S
Sbjct: 302 VAVTVDAPAVVKLIMDRLMES 322

[Close]

BLAST of Carg27582 vs. Swiss-Prot
Match: sp|Q9SJM7|URH1_ARATH (Uridine nucleosidase 1 OS=Arabidopsis thaliana OX=3702 GN=URH1 PE=1 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 3.0e-11
Identity = 36/79 (45.57%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 4   GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 63
           GVYLHDP + VA V P LFTY +GVVRV+T GI  G T++    KR+   + W     + 
Sbjct: 256 GVYLHDPVSFVAVVRPDLFTYKKGVVRVETQGICVGHTLMDQGLKRWNGSNPWVGYSPIS 315

Query: 64  VAVTVDAPAVVKLVMDRLI 83
           VA TVD   V++ V  +L+
Sbjct: 316 VAWTVDVEGVLEYVKAKLM 334

[Close]

BLAST of Carg27582 vs. Swiss-Prot
Match: sp|Q6ZJ05|URH1_ORYSJ (Probable uridine nucleosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=URH1 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 7.3e-10
Identity = 31/79 (39.24%), Postives = 46/79 (58.23%), Query Frame = 0


Query: 4   GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 63
           G++LHDP +  A V P  FT+ +GVVRV+T GI  G T++    K++   + W     + 
Sbjct: 244 GIFLHDPVSFTALVHPEYFTFKKGVVRVETQGICTGHTLMDQGLKKWNSENPWSGYKPIS 303

Query: 64  VAVTVDAPAVVKLVMDRLI 83
           VA TVD P V+  V + L+
Sbjct: 304 VAWTVDVPNVLAFVKELLM 322

[Close]

BLAST of Carg27582 vs. Swiss-Prot
Match: sp|Q652Q8|URH2_ORYSJ (Probable uridine nucleosidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=URH2 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.1e-08
Identity = 29/80 (36.25%), Postives = 45/80 (56.25%), Query Frame = 0


Query: 5   VYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVKV 64
           ++LHDP +  A V P  FT+ +GVVRV+T GI +G T +    K++   + W     + V
Sbjct: 257 LFLHDPVSFTALVHPEYFTFKKGVVRVETQGICKGHTSMDMGLKKWNSDNPWTGYSPISV 316

Query: 65  AVTVDAPAVVKLVMDRLIDS 85
           A TVD P V+    + L ++
Sbjct: 317 AWTVDVPKVLAYAKELLFNA 336

[Close]

BLAST of Carg27582 vs. TrEMBL
Match: tr|A0A1S3C534|A0A1S3C534_CUCME (probable uridine nucleosidase 2 OS=Cucumis melo OX=3656 GN=LOC103496983 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.7e-35
Identity = 76/81 (93.83%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 4   GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 63
           GVYLHDPAT++AAVDPSLFTYTEGVVRVQTTGISRGLTILYN +KRFGEVSEWCDKPTVK
Sbjct: 241 GVYLHDPATLIAAVDPSLFTYTEGVVRVQTTGISRGLTILYNKQKRFGEVSEWCDKPTVK 300

Query: 64  VAVTVDAPAVVKLVMDRLIDS 85
           VA+TVDAPAVVKLVMDRLIDS
Sbjct: 301 VAITVDAPAVVKLVMDRLIDS 321

[Close]

BLAST of Carg27582 vs. TrEMBL
Match: tr|A0A0A0LHR2|A0A0A0LHR2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G129140 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.7e-35
Identity = 75/81 (92.59%), Postives = 80/81 (98.77%), Query Frame = 0


Query: 4   GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 63
           GVYLHDPAT++AAVDP+LFTYTEGVVRVQTTGISRGLTILYN +KRFGEVSEWCDKPTVK
Sbjct: 241 GVYLHDPATLIAAVDPTLFTYTEGVVRVQTTGISRGLTILYNKQKRFGEVSEWCDKPTVK 300

Query: 64  VAVTVDAPAVVKLVMDRLIDS 85
           VA+TVDAPAVVKLVMDRLIDS
Sbjct: 301 VAITVDAPAVVKLVMDRLIDS 321

[Close]

BLAST of Carg27582 vs. TrEMBL
Match: tr|A0A2P4H825|A0A2P4H825_QUESU (Putative uridine nucleosidase 2 OS=Quercus suber OX=58331 GN=CFP56_72452 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.2e-30
Identity = 67/81 (82.72%), Postives = 77/81 (95.06%), Query Frame = 0


Query: 4   GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 63
           GVYLHDPAT++AAVDPSL TYTEGVVRVQT+GI++GLTILYN +KRFGEV+EW DKPTVK
Sbjct: 512 GVYLHDPATILAAVDPSLMTYTEGVVRVQTSGITKGLTILYNKQKRFGEVTEWTDKPTVK 571

Query: 64  VAVTVDAPAVVKLVMDRLIDS 85
           VAVT DAPA+VKLVM+RL+DS
Sbjct: 572 VAVTADAPALVKLVMERLMDS 592

[Close]

BLAST of Carg27582 vs. TrEMBL
Match: tr|A0A2N9IL63|A0A2N9IL63_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53484 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.6e-30
Identity = 66/81 (81.48%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 4   GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 63
           GVYLHDPAT++AAVDPSL TYTEGVVRVQTTGI++G+TILYN +KRFGEV+EW DKPTVK
Sbjct: 279 GVYLHDPATLLAAVDPSLMTYTEGVVRVQTTGITKGMTILYNQQKRFGEVTEWTDKPTVK 338

Query: 64  VAVTVDAPAVVKLVMDRLIDS 85
           VAVT DAP +VKLVM+RL+DS
Sbjct: 339 VAVTADAPTLVKLVMERLMDS 359

[Close]

BLAST of Carg27582 vs. TrEMBL
Match: tr|A0A2I4GN11|A0A2I4GN11_9ROSI (probable uridine nucleosidase 2 OS=Juglans regia OX=51240 GN=LOC109009305 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.6e-30
Identity = 67/81 (82.72%), Postives = 75/81 (92.59%), Query Frame = 0


Query: 4   GVYLHDPATVVAAVDPSLFTYTEGVVRVQTTGISRGLTILYNNKKRFGEVSEWCDKPTVK 63
           GVYLHDP  ++AAVDPSL TYTEGVVRVQT GI+RGLTILYN +KRFGEV+EW DKPTVK
Sbjct: 241 GVYLHDPTALIAAVDPSLITYTEGVVRVQTCGITRGLTILYNKQKRFGEVTEWTDKPTVK 300

Query: 64  VAVTVDAPAVVKLVMDRLIDS 85
           VAVTVDAPAVVKL+M+RL+DS
Sbjct: 301 VAVTVDAPAVVKLLMERLMDS 321

The following BLAST results are available for this feature:

BLAST of Carg27582 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929936.1	1.0e-36	98.77	probable uridine nucleosidase 2, partial [Cucurbita moschata]	[more]
XP_022930096.1	1.0e-36	98.77	probable uridine nucleosidase 2 [Cucurbita moschata]	[more]
XP_023536058.1	1.0e-36	98.77	probable uridine nucleosidase 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022974001.1	2.3e-36	97.53	probable uridine nucleosidase 2 [Cucurbita maxima]	[more]
XP_022974013.1	6.7e-36	96.30	probable uridine nucleosidase 2 [Cucurbita maxima]	[more]

BLAST of Carg27582 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G05620.1	1.9e-32	80.25	uridine-ribohydrolase 2	[more]
AT2G36310.1	1.7e-12	45.57	uridine-ribohydrolase 1	[more]

BLAST of Carg27582 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LAC4\|URH2_ARATH	3.4e-31	80.25	Probable uridine nucleosidase 2 OS=Arabidopsis thaliana OX=3702 GN=URH2 PE=2 SV=...	[more]
sp\|Q9SJM7\|URH1_ARATH	3.0e-11	45.57	Uridine nucleosidase 1 OS=Arabidopsis thaliana OX=3702 GN=URH1 PE=1 SV=2	[more]
sp\|Q6ZJ05\|URH1_ORYSJ	7.3e-10	39.24	Probable uridine nucleosidase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=URH1...	[more]
sp\|Q652Q8\|URH2_ORYSJ	3.1e-08	36.25	Probable uridine nucleosidase 2 OS=Oryza sativa subsp. japonica OX=39947 GN=URH2...	[more]

BLAST of Carg27582 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C534\|A0A1S3C534_CUCME	1.7e-35	93.83	probable uridine nucleosidase 2 OS=Cucumis melo OX=3656 GN=LOC103496983 PE=4 SV=...	[more]
tr\|A0A0A0LHR2\|A0A0A0LHR2_CUCSA	3.7e-35	92.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G129140 PE=4 SV=1	[more]
tr\|A0A2P4H825\|A0A2P4H825_QUESU	1.2e-30	82.72	Putative uridine nucleosidase 2 OS=Quercus suber OX=58331 GN=CFP56_72452 PE=4 SV...	[more]
tr\|A0A2N9IL63\|A0A2N9IL63_FAGSY	3.6e-30	81.48	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS53484 PE=4 SV=1	[more]
tr\|A0A2I4GN11\|A0A2I4GN11_9ROSI	3.6e-30	82.72	probable uridine nucleosidase 2 OS=Juglans regia OX=51240 GN=LOC109009305 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023186	Inosine/uridine_hydrolase
IPR036452	Ribo_hydro-like
IPR001910	Inosine/uridine_hydrolase_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27582-RA	Carg27582-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001910	Inosine/uridine-preferring nucleoside hydrolase domain	PFAM	PF01156	IU_nuc_hydro	coord: 3..74 e-value: 3.4E-8 score: 33.3
IPR036452	Ribonucleoside hydrolase-like	GENE3D	G3DSA:3.90.245.10		coord: 1..84 e-value: 2.5E-17 score: 64.9
IPR036452	Ribonucleoside hydrolase-like	SUPERFAMILY	SSF53590	Nucleoside hydrolase	coord: 2..81
None	No IPR available	PANTHER	PTHR12304:SF1	URIDINE NUCLEOSIDASE 1	coord: 3..82
IPR023186	Inosine/uridine-preferring nucleoside hydrolase	PANTHER	PTHR12304	INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE	coord: 3..82

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27582	CmaCh00G001410	Cucurbita maxima (Rimu)	carcmaB1157
Carg27582	CmoCh04G020910	Cucurbita moschata (Rifu)	carcmoB1127
Carg27582	Cp4.1LG01g17510	Cucurbita pepo (Zucchini)	carcpeB1166

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None