Carg27543 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27543
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	S-type anion channel like
Location	Cucurbita_argyrosperma_scaffold_458 : 48636 .. 49307 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGGTGTTTTTAATTCCAATTGTTATATTGGATGTCAAAATCTACGGCCAATGGTTCATAAAAGGAAAGAGATTTTTATCCACCGTTGCTAATCCAACCAGCCAGCTTTCTGTCATCGGAAACTTGGCCGGAGCTCGGACGTTGGCCGTGATGGGGTGGCGGGAGACATCATTATGCATGTTTTCTCTCGGAATGTCACATTATTTGGTGCTTTTTGTGACACTTTACCAAAGATTGGCCGGAAGTAATAGCCTGCCAGCCATTTTACGGCCGGTGTTCTTCTTGTTCTTCGCTGTTCCAAGCATGGCGAGCTTGGCTTGGAGCTCAATCACTAAAAGATTCGATACATTTTCAAAGATTTTGTTTTTTGTTTCGGTTTTTTTGTTTGTGTCTCTTGTTTCAAGACCAATGCTTTTTAGAAAATGTATGAGGAAATTCACTGTGGCGTGGTGGTCTTATTCTTTTCCTCTTTCATTGCTTGCTTTGGCTTGTAATGAATATGCTAAAGAAGTTGGAGTTGAAGCTGCTCATGTTTGTGCTCTTCTTCTCGCTCTTCTCTCCCTTTTCGTGTCTCTCTTTTTGATGATTCTTACCGTTTTGAGAACGAATTCGATGATTCCGATGAGCTCGCCCGAGATTAGTTCCGATAGTAGCGGTGCTGAGCCATGA

mRNA sequence

ATGTGGGTGTTTTTAATTCCAATTGTTATATTGGATGTCAAAATCTACGGCCAATGGTTCATAAAAGGAAAGAGATTTTTATCCACCGTTGCTAATCCAACCAGCCAGCTTTCTGTCATCGGAAACTTGGCCGGAGCTCGGACGTTGGCCGTGATGGGGTGGCGGGAGACATCATTATGCATGTTTTCTCTCGGAATGTCACATTATTTGGTGCTTTTTGTGACACTTTACCAAAGATTGGCCGGAAGTAATAGCCTGCCAGCCATTTTACGGCCGGTGTTCTTCTTGTTCTTCGCTGTTCCAAGCATGGCGAGCTTGGCTTGGAGCTCAATCACTAAAAGATTCGATACATTTTCAAAGATTTTGTTTTTTGTTTCGGTTTTTTTGTTTGTGTCTCTTGTTTCAAGACCAATGCTTTTTAGAAAATGTATGAGGAAATTCACTGTGGCGTGGTGGTCTTATTCTTTTCCTCTTTCATTGCTTGCTTTGGCTTGTAATGAATATGCTAAAGAAGTTGGAGTTGAAGCTGCTCATGTTTGTGCTCTTCTTCTCGCTCTTCTCTCCCTTTTCGTGTCTCTCTTTTTGATGATTCTTACCGTTTTGAGAACGAATTCGATGATTCCGATGAGCTCGCCCGAGATTAGTTCCGATAGTAGCGGTGCTGAGCCATGA

Coding sequence (CDS)

ATGTGGGTGTTTTTAATTCCAATTGTTATATTGGATGTCAAAATCTACGGCCAATGGTTCATAAAAGGAAAGAGATTTTTATCCACCGTTGCTAATCCAACCAGCCAGCTTTCTGTCATCGGAAACTTGGCCGGAGCTCGGACGTTGGCCGTGATGGGGTGGCGGGAGACATCATTATGCATGTTTTCTCTCGGAATGTCACATTATTTGGTGCTTTTTGTGACACTTTACCAAAGATTGGCCGGAAGTAATAGCCTGCCAGCCATTTTACGGCCGGTGTTCTTCTTGTTCTTCGCTGTTCCAAGCATGGCGAGCTTGGCTTGGAGCTCAATCACTAAAAGATTCGATACATTTTCAAAGATTTTGTTTTTTGTTTCGGTTTTTTTGTTTGTGTCTCTTGTTTCAAGACCAATGCTTTTTAGAAAATGTATGAGGAAATTCACTGTGGCGTGGTGGTCTTATTCTTTTCCTCTTTCATTGCTTGCTTTGGCTTGTAATGAATATGCTAAAGAAGTTGGAGTTGAAGCTGCTCATGTTTGTGCTCTTCTTCTCGCTCTTCTCTCCCTTTTCGTGTCTCTCTTTTTGATGATTCTTACCGTTTTGAGAACGAATTCGATGATTCCGATGAGCTCGCCCGAGATTAGTTCCGATAGTAGCGGTGCTGAGCCATGA

Protein sequence

MWVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLCMFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSKILFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHVCALLLALLSLFVSLFLMILTVLRTNSMIPMSSPEISSDSSGAEP

Homology

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BLAST of Carg27543 vs. NCBI nr
Match: XP_022930729.1 (S-type anion channel SLAH1-like [Cucurbita moschata])

HSP 1 Score: 388.7 bits (997), Expect = 1.4e-104
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MWVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLC 60
           MWVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLC
Sbjct: 131 MWVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLC 190

Query: 61  MFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSK 120
           MFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSK
Sbjct: 191 MFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSK 250

Query: 121 ILFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHVC 180
           ILFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHVC
Sbjct: 251 ILFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHVC 310

Query: 181 XXXXXXXXXXXXXXXXXXXXLRTNSMIPMSSPEISSDSSGAEP 224
           XXXXXXXXXXXXXXXXXXXXLRTNSMIPMSSPEISSDSSGAEP
Sbjct: 311 XXXXXXXXXXXXXXXXXXXXLRTNSMIPMSSPEISSDSSGAEP 353

[Close]

BLAST of Carg27543 vs. NCBI nr
Match: XP_022988831.1 (S-type anion channel SLAH1-like [Cucurbita maxima])

HSP 1 Score: 388.3 bits (996), Expect = 1.8e-104
Identity = 222/223 (99.55%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MWVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLC 60
           MWVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLC
Sbjct: 131 MWVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLC 190

Query: 61  MFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSK 120
           MFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSK
Sbjct: 191 MFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSK 250

Query: 121 ILFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHVC 180
           ILFFVSVFLFVSL+SRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHVC
Sbjct: 251 ILFFVSVFLFVSLISRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHVC 310

Query: 181 XXXXXXXXXXXXXXXXXXXXLRTNSMIPMSSPEISSDSSGAEP 224
           XXXXXXXXXXXXXXXXXXXXLRTNSMIPMSSPEISSDSSGAEP
Sbjct: 311 XXXXXXXXXXXXXXXXXXXXLRTNSMIPMSSPEISSDSSGAEP 353

[Close]

BLAST of Carg27543 vs. NCBI nr
Match: XP_023531645.1 (S-type anion channel SLAH1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388.3 bits (996), Expect = 1.8e-104
Identity = 219/223 (98.21%), Postives = 220/223 (98.65%), Query Frame = 0


Query: 1   MWVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLC 60
           MWVFL+PIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLC
Sbjct: 131 MWVFLVPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLC 190

Query: 61  MFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSK 120
           MFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSK
Sbjct: 191 MFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSK 250

Query: 121 ILFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHVC 180
           ILFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHVC
Sbjct: 251 ILFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHVC 310

Query: 181 XXXXXXXXXXXXXXXXXXXXLRTNSMIPMSSPEISSDSSGAEP 224
             XXXXXXXXXXXXXXXXX LRTNSMIPMSSPEISSDSSGAEP
Sbjct: 311 ALXXXXXXXXXXXXXXXXXVLRTNSMIPMSSPEISSDSSGAEP 353

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BLAST of Carg27543 vs. NCBI nr
Match: KGN43512.1 (hypothetical protein Csa_7G043050 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 4.6e-84
Identity = 165/223 (73.99%), Postives = 184/223 (82.51%), Query Frame = 0


Query: 1   MWVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLC 60
           MWVF+IPIV+LDVKIYGQWF KGKRFLSTVANP+SQLSVIGNLAGAR  AV+GWRE++LC
Sbjct: 131 MWVFIIPIVVLDVKIYGQWFTKGKRFLSTVANPSSQLSVIGNLAGARAAAVIGWRESALC 190

Query: 61  MFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSK 120
           +FSLGM+HYLVLFVTLYQRL+GSN+LPAILRPVFFLFFA PSMASLAWSSI   FDTFSK
Sbjct: 191 LFSLGMAHYLVLFVTLYQRLSGSNTLPAILRPVFFLFFAAPSMASLAWSSINGGFDTFSK 250

Query: 121 ILFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHVC 180
           +LFF+S+FLFVSLVSRP LFRK MRKF+VAWW+YSFPLS+LALACNEYAKEVG EAAHV 
Sbjct: 251 MLFFLSIFLFVSLVSRPGLFRKSMRKFSVAWWAYSFPLSVLALACNEYAKEVGAEAAHVF 310

Query: 181 XXXXXXXXXXXXXXXXXXXXLRTNSMIPMSSPEISSDSSGAEP 224
                               LR++  IP    EI+SDSS  EP
Sbjct: 311 ALLLALLSVLVSLFLMIVTVLRSHLFIPEIPTEITSDSSSTEP 353

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BLAST of Carg27543 vs. NCBI nr
Match: XP_004144593.2 (PREDICTED: S-type anion channel SLAH1-like [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 4.6e-84
Identity = 165/223 (73.99%), Postives = 184/223 (82.51%), Query Frame = 0


Query: 1   MWVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLC 60
           MWVF+IPIV+LDVKIYGQWF KGKRFLSTVANP+SQLSVIGNLAGAR  AV+GWRE++LC
Sbjct: 133 MWVFIIPIVVLDVKIYGQWFTKGKRFLSTVANPSSQLSVIGNLAGARAAAVIGWRESALC 192

Query: 61  MFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSK 120
           +FSLGM+HYLVLFVTLYQRL+GSN+LPAILRPVFFLFFA PSMASLAWSSI   FDTFSK
Sbjct: 193 LFSLGMAHYLVLFVTLYQRLSGSNTLPAILRPVFFLFFAAPSMASLAWSSINGGFDTFSK 252

Query: 121 ILFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHVC 180
           +LFF+S+FLFVSLVSRP LFRK MRKF+VAWW+YSFPLS+LALACNEYAKEVG EAAHV 
Sbjct: 253 MLFFLSIFLFVSLVSRPGLFRKSMRKFSVAWWAYSFPLSVLALACNEYAKEVGAEAAHVF 312

Query: 181 XXXXXXXXXXXXXXXXXXXXLRTNSMIPMSSPEISSDSSGAEP 224
                               LR++  IP    EI+SDSS  EP
Sbjct: 313 ALLLALLSVLVSLFLMIVTVLRSHLFIPEIPTEITSDSSSTEP 355

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BLAST of Carg27543 vs. TAIR10
Match: AT1G62280.1 (SLAC1 homologue 1)

HSP 1 Score: 229.2 bits (583), Expect = 2.5e-60
Identity = 109/171 (63.74%), Postives = 136/171 (79.53%), Query Frame = 0


Query: 2   WVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLCM 61
           W+F +P++ LD+K+YGQWF   KRFLS +ANP SQ+SVI NL  AR  A MGW E +LCM
Sbjct: 153 WIFAVPVLTLDIKLYGQWFTTEKRFLSMLANPASQVSVIANLVAARGAAEMGWNECALCM 212

Query: 62  FSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSKI 121
           FSLGM HYLV+FVTLYQRL G N+ PA LRP+FFLF A P+MASLAW+SI   FD  +K+
Sbjct: 213 FSLGMVHYLVIFVTLYQRLPGGNNFPAKLRPIFFLFVAAPAMASLAWNSICGTFDAVAKM 272

Query: 122 LFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEV 173
           LFF+S+F+F+SLV RP LF+K M++F VAWW+YSFPL+ LAL   +YA+EV
Sbjct: 273 LFFLSLFIFMSLVCRPNLFKKSMKRFNVAWWAYSFPLTFLALDSVQYAQEV 323

[Close]

BLAST of Carg27543 vs. TAIR10
Match: AT1G62262.1 (SLAC1 homologue 4)

HSP 1 Score: 227.6 bits (579), Expect = 7.4e-60
Identity = 108/178 (60.67%), Postives = 137/178 (76.97%), Query Frame = 0


Query: 2   WVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLCM 61
           W+F +P++ LD K+YGQWF   KRFLS +ANP SQ+SVI NL  AR  A MGW+E +LC+
Sbjct: 145 WIFAVPVLTLDTKLYGQWFTTEKRFLSIMANPASQVSVIANLVAARGAAEMGWKECALCL 204

Query: 62  FSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSKI 121
           FSLGM HYLV+FVTLYQRL G N+ P  LRPVFFLFFA P+ ASLAW+SI   FDT +K+
Sbjct: 205 FSLGMVHYLVIFVTLYQRLPGGNNFPTTLRPVFFLFFAAPATASLAWNSICGNFDTIAKM 264

Query: 122 LFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHV 180
           LFF+S+F+F+SLV RP L +K +++F VAWW+YSFP++ LAL   +YA+EV    A V
Sbjct: 265 LFFLSLFIFISLVCRPNLLKKSIKRFNVAWWAYSFPITFLALNSVQYAQEVKDHVASV 322

[Close]

BLAST of Carg27543 vs. TAIR10
Match: AT4G27970.1 (SLAC1 homologue 2)

HSP 1 Score: 172.2 bits (435), Expect = 3.7e-43
Identity = 89/173 (51.45%), Postives = 127/173 (73.41%), Query Frame = 0


Query: 1   MWVFLI-PIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSL 60
           +W FL+ PI+ L++KIYGQW   G+R LS VANPT+ LS++GN AGA   A MG +E  +
Sbjct: 248 LWYFLMAPILFLEMKIYGQWMSGGQRRLSKVANPTNHLSIVGNFAGALLGASMGLKEGPI 307

Query: 61  CMFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFS 120
             F++G+++YLVLFVTLYQRL  + +LP  L PVFFLF A P++AS+AW+ I+  FD  S
Sbjct: 308 FFFAIGLAYYLVLFVTLYQRLPTNETLPKELHPVFFLFVAAPAVASMAWTKISASFDLGS 367

Query: 121 KILFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEV 173
           ++ +F+S+FL+ SLV R  LFR    KF++AWW+Y+FP++ +A A  +Y+ EV
Sbjct: 368 RLAYFISLFLYFSLVCRINLFRGF--KFSLAWWAYTFPMTAVASATIKYSDEV 418

[Close]

BLAST of Carg27543 vs. TAIR10
Match: AT5G24030.1 (SLAC1 homologue 3)

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-41
Identity = 85/171 (49.71%), Postives = 119/171 (69.59%), Query Frame = 0


Query: 2   WVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLCM 61
           ++ + P + L++KIYGQW   G+R LS VANPT+ LSV+GN  GA   A MG RE  +  
Sbjct: 365 YLLMFPFICLELKIYGQWMSGGQRRLSRVANPTNHLSVVGNFVGALLGASMGLREGPIFF 424

Query: 62  FSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSKI 121
           +++GM+HYLVLFVTLYQRL  + +LP  L PVFFLF A PS+AS+AW+ +T  FD  SK+
Sbjct: 425 YAVGMAHYLVLFVTLYQRLPTNETLPKDLHPVFFLFVAAPSVASMAWAKVTGSFDYGSKV 484

Query: 122 LFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEV 173
            +F+++FL+ SL  R   FR    KF+++WW+Y+FP++  A+A   YA  V
Sbjct: 485 CYFIAIFLYFSLAVRINFFRGI--KFSLSWWAYTFPMTGAAIATIRYATVV 533

[Close]

BLAST of Carg27543 vs. TAIR10
Match: AT1G12480.1 (C4-dicarboxylate transporter/malic acid transport protein)

HSP 1 Score: 162.2 bits (409), Expect = 3.8e-40
Identity = 83/170 (48.82%), Postives = 119/170 (70.00%), Query Frame = 0


Query: 3   VFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLCMF 62
           VF+ P   L++KIYGQW   GKR L  VANP+S LSV+GN  GA   + +GW E +  ++
Sbjct: 299 VFMGPYFFLELKIYGQWLSGGKRRLCKVANPSSHLSVVGNFVGAILASKVGWDEVAKFLW 358

Query: 63  SLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSKIL 122
           ++G +HYLV+FVTLYQRL  S +LP  L PV+ +F A PS AS+AW++I  +FD  S+  
Sbjct: 359 AVGFAHYLVVFVTLYQRLPTSEALPKELHPVYSMFIAAPSAASIAWNTIYGQFDGCSRTC 418

Query: 123 FFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEV 173
           FF+++FL++SLV+R   F     KF+VAWWSY+FP++  ++A  +YA+ V
Sbjct: 419 FFIALFLYISLVARINFFTGF--KFSVAWWSYTFPMTTASVATIKYAEAV 466

[Close]

BLAST of Carg27543 vs. Swiss-Prot
Match: sp|Q5E930|SLAH1_ARATH (S-type anion channel SLAH1 OS=Arabidopsis thaliana OX=3702 GN=SLAH1 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.6e-59
Identity = 109/171 (63.74%), Postives = 136/171 (79.53%), Query Frame = 0


Query: 2   WVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLCM 61
           W+F +P++ LD+K+YGQWF   KRFLS +ANP SQ+SVI NL  AR  A MGW E +LCM
Sbjct: 153 WIFAVPVLTLDIKLYGQWFTTEKRFLSMLANPASQVSVIANLVAARGAAEMGWNECALCM 212

Query: 62  FSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSKI 121
           FSLGM HYLV+FVTLYQRL G N+ PA LRP+FFLF A P+MASLAW+SI   FD  +K+
Sbjct: 213 FSLGMVHYLVIFVTLYQRLPGGNNFPAKLRPIFFLFVAAPAMASLAWNSICGTFDAVAKM 272

Query: 122 LFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEV 173
           LFF+S+F+F+SLV RP LF+K M++F VAWW+YSFPL+ LAL   +YA+EV
Sbjct: 273 LFFLSLFIFMSLVCRPNLFKKSMKRFNVAWWAYSFPLTFLALDSVQYAQEV 323

[Close]

BLAST of Carg27543 vs. Swiss-Prot
Match: sp|A8MRV9|SLAH4_ARATH (S-type anion channel SLAH4 OS=Arabidopsis thaliana OX=3702 GN=SLAH4 PE=2 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 1.3e-58
Identity = 108/178 (60.67%), Postives = 137/178 (76.97%), Query Frame = 0


Query: 2   WVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLCM 61
           W+F +P++ LD K+YGQWF   KRFLS +ANP SQ+SVI NL  AR  A MGW+E +LC+
Sbjct: 145 WIFAVPVLTLDTKLYGQWFTTEKRFLSIMANPASQVSVIANLVAARGAAEMGWKECALCL 204

Query: 62  FSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSKI 121
           FSLGM HYLV+FVTLYQRL G N+ P  LRPVFFLFFA P+ ASLAW+SI   FDT +K+
Sbjct: 205 FSLGMVHYLVIFVTLYQRLPGGNNFPTTLRPVFFLFFAAPATASLAWNSICGNFDTIAKM 264

Query: 122 LFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHV 180
           LFF+S+F+F+SLV RP L +K +++F VAWW+YSFP++ LAL   +YA+EV    A V
Sbjct: 265 LFFLSLFIFISLVCRPNLLKKSIKRFNVAWWAYSFPITFLALNSVQYAQEVKDHVASV 322

[Close]

BLAST of Carg27543 vs. Swiss-Prot
Match: sp|Q9ASQ7|SLAH2_ARATH (S-type anion channel SLAH2 OS=Arabidopsis thaliana OX=3702 GN=SLAH2 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 6.6e-42
Identity = 89/173 (51.45%), Postives = 127/173 (73.41%), Query Frame = 0


Query: 1   MWVFLI-PIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSL 60
           +W FL+ PI+ L++KIYGQW   G+R LS VANPT+ LS++GN AGA   A MG +E  +
Sbjct: 248 LWYFLMAPILFLEMKIYGQWMSGGQRRLSKVANPTNHLSIVGNFAGALLGASMGLKEGPI 307

Query: 61  CMFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFS 120
             F++G+++YLVLFVTLYQRL  + +LP  L PVFFLF A P++AS+AW+ I+  FD  S
Sbjct: 308 FFFAIGLAYYLVLFVTLYQRLPTNETLPKELHPVFFLFVAAPAVASMAWTKISASFDLGS 367

Query: 121 KILFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEV 173
           ++ +F+S+FL+ SLV R  LFR    KF++AWW+Y+FP++ +A A  +Y+ EV
Sbjct: 368 RLAYFISLFLYFSLVCRINLFRGF--KFSLAWWAYTFPMTAVASATIKYSDEV 418

[Close]

BLAST of Carg27543 vs. Swiss-Prot
Match: sp|Q9FLV9|SLAH3_ARATH (S-type anion channel SLAH3 OS=Arabidopsis thaliana OX=3702 GN=SLAH3 PE=1 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.1e-40
Identity = 85/171 (49.71%), Postives = 119/171 (69.59%), Query Frame = 0


Query: 2   WVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLCM 61
           ++ + P + L++KIYGQW   G+R LS VANPT+ LSV+GN  GA   A MG RE  +  
Sbjct: 365 YLLMFPFICLELKIYGQWMSGGQRRLSRVANPTNHLSVVGNFVGALLGASMGLREGPIFF 424

Query: 62  FSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSKI 121
           +++GM+HYLVLFVTLYQRL  + +LP  L PVFFLF A PS+AS+AW+ +T  FD  SK+
Sbjct: 425 YAVGMAHYLVLFVTLYQRLPTNETLPKDLHPVFFLFVAAPSVASMAWAKVTGSFDYGSKV 484

Query: 122 LFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEV 173
            +F+++FL+ SL  R   FR    KF+++WW+Y+FP++  A+A   YA  V
Sbjct: 485 CYFIAIFLYFSLAVRINFFRGI--KFSLSWWAYTFPMTGAAIATIRYATVV 533

[Close]

BLAST of Carg27543 vs. Swiss-Prot
Match: sp|Q9LD83|SLAC1_ARATH (Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana OX=3702 GN=SLAC1 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.9e-39
Identity = 83/170 (48.82%), Postives = 119/170 (70.00%), Query Frame = 0


Query: 3   VFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLCMF 62
           VF+ P   L++KIYGQW   GKR L  VANP+S LSV+GN  GA   + +GW E +  ++
Sbjct: 299 VFMGPYFFLELKIYGQWLSGGKRRLCKVANPSSHLSVVGNFVGAILASKVGWDEVAKFLW 358

Query: 63  SLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSKIL 122
           ++G +HYLV+FVTLYQRL  S +LP  L PV+ +F A PS AS+AW++I  +FD  S+  
Sbjct: 359 AVGFAHYLVVFVTLYQRLPTSEALPKELHPVYSMFIAAPSAASIAWNTIYGQFDGCSRTC 418

Query: 123 FFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEV 173
           FF+++FL++SLV+R   F     KF+VAWWSY+FP++  ++A  +YA+ V
Sbjct: 419 FFIALFLYISLVARINFFTGF--KFSVAWWSYTFPMTTASVATIKYAEAV 466

[Close]

BLAST of Carg27543 vs. TrEMBL
Match: tr|A0A0A0K5I9|A0A0A0K5I9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043050 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 3.0e-84
Identity = 165/223 (73.99%), Postives = 184/223 (82.51%), Query Frame = 0


Query: 1   MWVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLC 60
           MWVF+IPIV+LDVKIYGQWF KGKRFLSTVANP+SQLSVIGNLAGAR  AV+GWRE++LC
Sbjct: 131 MWVFIIPIVVLDVKIYGQWFTKGKRFLSTVANPSSQLSVIGNLAGARAAAVIGWRESALC 190

Query: 61  MFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSK 120
           +FSLGM+HYLVLFVTLYQRL+GSN+LPAILRPVFFLFFA PSMASLAWSSI   FDTFSK
Sbjct: 191 LFSLGMAHYLVLFVTLYQRLSGSNTLPAILRPVFFLFFAAPSMASLAWSSINGGFDTFSK 250

Query: 121 ILFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHVC 180
           +LFF+S+FLFVSLVSRP LFRK MRKF+VAWW+YSFPLS+LALACNEYAKEVG EAAHV 
Sbjct: 251 MLFFLSIFLFVSLVSRPGLFRKSMRKFSVAWWAYSFPLSVLALACNEYAKEVGAEAAHVF 310

Query: 181 XXXXXXXXXXXXXXXXXXXXLRTNSMIPMSSPEISSDSSGAEP 224
                               LR++  IP    EI+SDSS  EP
Sbjct: 311 ALLLALLSVLVSLFLMIVTVLRSHLFIPEIPTEITSDSSSTEP 353

[Close]

BLAST of Carg27543 vs. TrEMBL
Match: tr|A0A1S3C0X5|A0A1S3C0X5_CUCME (S-type anion channel SLAH1-like OS=Cucumis melo OX=3656 GN=LOC103495607 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 4.0e-84
Identity = 164/223 (73.54%), Postives = 185/223 (82.96%), Query Frame = 0


Query: 1   MWVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLC 60
           MWVF+IPIV+LDVKIYGQWF KGKRFLSTVANP+SQLSVIGNLAGAR  AV+GWRE++LC
Sbjct: 133 MWVFIIPIVVLDVKIYGQWFTKGKRFLSTVANPSSQLSVIGNLAGARAAAVIGWRESALC 192

Query: 61  MFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSK 120
           +FSLGM+HYLVLFVTLYQRL+GSN+LPAILRPVFFLFFA PSMASLAWSSI   FDTFSK
Sbjct: 193 LFSLGMAHYLVLFVTLYQRLSGSNTLPAILRPVFFLFFAAPSMASLAWSSINGGFDTFSK 252

Query: 121 ILFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHVC 180
           +LFF+SVFLFVSLVSRP LFRK MRKF++AWW+YSFPLS+LALACNEYAKEV   AAHV 
Sbjct: 253 MLFFLSVFLFVSLVSRPGLFRKSMRKFSIAWWAYSFPLSVLALACNEYAKEVEATAAHVF 312

Query: 181 XXXXXXXXXXXXXXXXXXXXLRTNSMIPMSSPEISSDSSGAEP 224
                               LR++ ++P +  EISSDSS AEP
Sbjct: 313 ALLLALISVLVSLFLMIVTVLRSHLLVPQTPTEISSDSSSAEP 355

[Close]

BLAST of Carg27543 vs. TrEMBL
Match: tr|A0A1U7ZHG9|A0A1U7ZHG9_NELNU (S-type anion channel SLAH1-like OS=Nelumbo nucifera OX=4432 GN=LOC104594041 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.8e-69
Identity = 136/211 (64.45%), Postives = 162/211 (76.78%), Query Frame = 0


Query: 2   WVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLCM 61
           WVF+IP+V LDVKIYGQWF KGKRFLSTVANPTSQLSVIGNL GAR  A MGW+E+++CM
Sbjct: 156 WVFIIPVVALDVKIYGQWFTKGKRFLSTVANPTSQLSVIGNLVGARAAAEMGWKESAMCM 215

Query: 62  FSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSKI 121
           FSLGM+HYLVLFVTLYQR +GS+ LPA+LRPVFFLFFA PSMASLAW SI+  FDT SK+
Sbjct: 216 FSLGMAHYLVLFVTLYQRFSGSDRLPAMLRPVFFLFFAAPSMASLAWDSISGNFDTPSKM 275

Query: 122 LFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHVCX 181
           LFF+S+FLF SL+ RP LF+K M++F VAWW+YSFPL+ LALA +EYA+EV  E AH   
Sbjct: 276 LFFLSLFLFTSLIFRPTLFKKSMKRFNVAWWAYSFPLTSLALASSEYAEEVNGEIAHGLM 335

Query: 182 XXXXXXXXXXXXXXXXXXXLRTNSMIPMSSP 213
                              L T+ ++P + P
Sbjct: 336 LVLSSLSVLVSLALTAFTALHTSMLLPDNDP 366

[Close]

BLAST of Carg27543 vs. TrEMBL
Match: tr|W9QIC7|W9QIC7_9ROSA (S-type anion channel SLAH1 OS=Morus notabilis OX=981085 GN=L484_011931 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 4.0e-68
Identity = 134/210 (63.81%), Postives = 161/210 (76.67%), Query Frame = 0


Query: 2   WVFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSLCM 61
           W F+IPIV+LDVKIYGQWF KGKRFLSTVANPTSQ+SVIGNL  AR  A MGW+E ++C+
Sbjct: 166 WGFVIPIVVLDVKIYGQWFTKGKRFLSTVANPTSQVSVIGNLVAARAAAEMGWKECAVCV 225

Query: 62  FSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFSKI 121
           FSLGM+HYLVLFVTLYQRLAGSNSLPA+LRPVFFLFF  PS+AS +WSSI+  FD+ SK+
Sbjct: 226 FSLGMAHYLVLFVTLYQRLAGSNSLPAMLRPVFFLFFGAPSVASFSWSSISGEFDSASKM 285

Query: 122 LFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAHVCX 181
           LFF+S+FLF+SLVSRP LF+K MRKF +AWW+YSFPL++LALA  EY++EV    AH   
Sbjct: 286 LFFLSLFLFMSLVSRPTLFKKSMRKFNMAWWAYSFPLTVLALAATEYSEEVKSGVAHALM 345

Query: 182 XXXXXXXXXXXXXXXXXXXLRTNSMIPMSS 212
                              L +N  +P S+
Sbjct: 346 LVLSAISFLVCLILIVITALHSNMFLPESN 375

[Close]

BLAST of Carg27543 vs. TrEMBL
Match: tr|A0A200PYV5|A0A200PYV5_9MAGN (Voltage-dependent anion channel OS=Macleaya cordata OX=56857 GN=BVC80_205g30 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 5.2e-68
Identity = 132/179 (73.74%), Postives = 154/179 (86.03%), Query Frame = 0


Query: 1   MW-VFLIPIVILDVKIYGQWFIKGKRFLSTVANPTSQLSVIGNLAGARTLAVMGWRETSL 60
           +W VF++PIV+LDVKIYGQWF KGKRFLS VANPTSQLSVIGNL GA+  A MGW+E++L
Sbjct: 159 LWLVFVVPIVVLDVKIYGQWFTKGKRFLSMVANPTSQLSVIGNLVGAQAAAEMGWKESAL 218

Query: 61  CMFSLGMSHYLVLFVTLYQRLAGSNSLPAILRPVFFLFFAVPSMASLAWSSITKRFDTFS 120
           CMFSLGM+HYLVLFVTLYQRL+GS+ LP +L PVFFLFFA PSMASLAW SIT  FDT S
Sbjct: 219 CMFSLGMAHYLVLFVTLYQRLSGSDRLPVVLHPVFFLFFAAPSMASLAWVSITGTFDTSS 278

Query: 121 KILFFVSVFLFVSLVSRPMLFRKCMRKFTVAWWSYSFPLSLLALACNEYAKEVGVEAAH 179
           K+LFF+S+FLF SLVSRP LF+K MR+F VAWW+YSFPL++LALA  EYA+EV    +H
Sbjct: 279 KMLFFLSLFLFASLVSRPNLFKKSMRRFNVAWWAYSFPLTVLALASTEYAREVKSSVSH 337

The following BLAST results are available for this feature:

BLAST of Carg27543 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930729.1	1.4e-104	100.00	S-type anion channel SLAH1-like [Cucurbita moschata]	[more]
XP_022988831.1	1.8e-104	99.55	S-type anion channel SLAH1-like [Cucurbita maxima]	[more]
XP_023531645.1	1.8e-104	98.21	S-type anion channel SLAH1-like [Cucurbita pepo subsp. pepo]	[more]
KGN43512.1	4.6e-84	73.99	hypothetical protein Csa_7G043050 [Cucumis sativus]	[more]
XP_004144593.2	4.6e-84	73.99	PREDICTED: S-type anion channel SLAH1-like [Cucumis sativus]	[more]

BLAST of Carg27543 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G62280.1	2.5e-60	63.74	SLAC1 homologue 1	[more]
AT1G62262.1	7.4e-60	60.67	SLAC1 homologue 4	[more]
AT4G27970.1	3.7e-43	51.45	SLAC1 homologue 2	[more]
AT5G24030.1	1.2e-41	49.71	SLAC1 homologue 3	[more]
AT1G12480.1	3.8e-40	48.82	C4-dicarboxylate transporter/malic acid transport protein	[more]

BLAST of Carg27543 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5E930\|SLAH1_ARATH	4.6e-59	63.74	S-type anion channel SLAH1 OS=Arabidopsis thaliana OX=3702 GN=SLAH1 PE=2 SV=1	[more]
sp\|A8MRV9\|SLAH4_ARATH	1.3e-58	60.67	S-type anion channel SLAH4 OS=Arabidopsis thaliana OX=3702 GN=SLAH4 PE=2 SV=1	[more]
sp\|Q9ASQ7\|SLAH2_ARATH	6.6e-42	51.45	S-type anion channel SLAH2 OS=Arabidopsis thaliana OX=3702 GN=SLAH2 PE=2 SV=1	[more]
sp\|Q9FLV9\|SLAH3_ARATH	2.1e-40	49.71	S-type anion channel SLAH3 OS=Arabidopsis thaliana OX=3702 GN=SLAH3 PE=1 SV=1	[more]
sp\|Q9LD83\|SLAC1_ARATH	6.9e-39	48.82	Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana OX=3702 GN=SLAC1 P...	[more]

BLAST of Carg27543 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K5I9\|A0A0A0K5I9_CUCSA	3.0e-84	73.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043050 PE=4 SV=1	[more]
tr\|A0A1S3C0X5\|A0A1S3C0X5_CUCME	4.0e-84	73.54	S-type anion channel SLAH1-like OS=Cucumis melo OX=3656 GN=LOC103495607 PE=4 SV=...	[more]
tr\|A0A1U7ZHG9\|A0A1U7ZHG9_NELNU	2.8e-69	64.45	S-type anion channel SLAH1-like OS=Nelumbo nucifera OX=4432 GN=LOC104594041 PE=4...	[more]
tr\|W9QIC7\|W9QIC7_9ROSA	4.0e-68	63.81	S-type anion channel SLAH1 OS=Morus notabilis OX=981085 GN=L484_011931 PE=4 SV=1	[more]
tr\|A0A200PYV5\|A0A200PYV5_9MAGN	5.2e-68	73.74	Voltage-dependent anion channel OS=Macleaya cordata OX=56857 GN=BVC80_205g30 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR004695	Voltage-dep_anion_channel
IPR038665	Voltage-dep_anion_channel_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27543-RA	Carg27543-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038665	Voltage-dependent anion channel superfamily	GENE3D	G3DSA:1.50.10.150		coord: 1..207 e-value: 1.6E-41 score: 144.5
IPR004695	Voltage-dependent anion channel	PFAM	PF03595	SLAC1	coord: 2..200 e-value: 1.4E-28 score: 100.0
None	No IPR available	PANTHER	PTHR31269:SF4	SUBFAMILY NOT NAMED	coord: 2..213
None	No IPR available	PANTHER	PTHR31269	FAMILY NOT NAMED	coord: 2..213

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27543	CmaCh11G018160	Cucurbita maxima (Rimu)	carcmaB1313
Carg27543	CmoCh11G018910	Cucurbita moschata (Rifu)	carcmoB1282
Carg27543	Lsi11G014410	Bottle gourd (USVL1VR-Ls)	carlsiB873
Carg27543	Bhi05G001185	Wax gourd	carwgoB1111

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None