Carg27537 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27537
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Exonuclease 3'-5' domain-containing protein 2
Location	Cucurbita_argyrosperma_scaffold_458 : 7590 .. 15111 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAACGAAGGAAAAACGAGAACGAGCCATTGATTCTAATGGAGCTTCATCGCAAGGCCAAAATCGCTTTAGTTGTAGCGTCTCTTGCAGCGCTAACAATCTACTTTACGGCCAGACGGCGCCGGAAGCAGAGGAGCGTTCGTAGTTCGTGTTATTTGCGAGATGATCAGAAGCCTCAGTACGCATTTAAACGCGTCTTGGCGACAATTTCCTTATTCTGCGTTCAAAACATTTGAAGCTCGATATGAATACAGGTGAAGTTAGTCGGTTACTCCTATTCCCAATTATGATCATTTGTTTACGCTGCCGAGACTTTAGTATGTCATTATAGAAGCAAATGAGAGAGAGTTTAATGAATGAACGATATATTGGAGCTAATGATTTACGTTTTGTTATTGGATTTAGCAACCTAATCTAAGTTCGTTAATTCGCATTAGAAATGTTTTGTTTGGGCAAATGATCAGATTTATGTGCTTTTAAGCTATAATTTCCATGGCAGCAAATAGGATGTAGGGAATGAAATCTGGAAGATTCTTTTTATTATTCTTTTTATTTAATAGTGCGAAAGTGCTCATAAGATAAAATTTTTTGGAAAAAATTTTTACCTCTTGTTTTTTTAAGATTGGTACAACAAGCTTTCATGATGGCTTCATTTGTCTTCTCGTCAATCTTAAGGCTCCATTTCTCGTAAAAGATTTGCAATGGTAGCTCTCAACTGTTCTTAAAACAAGGGTTGGCTGAGTGAAGTGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGACAATATTGTAACTCTCATCCCCTACGAATCAGAAATACTCTCGGAACTTCTTCGCAGAATTTGATTTATTAGTAGTGGAAAGAAACGATTTACCCTTGAGTGACACTTATGTTTGGGTTGAGACCGCTTCTCAATTGAAGAGACTCGTGATGTGTTGAATAAGAAATGGTGTTTGCTGTTGATACCGAGCAGCACAGTCTAAGATCTTCTTGCTGGCTTCACTGCTTTAGTTACAGGTAAATTTATTCTCTCTCGCTCTCTCTCTCACACACACACAGATCATTCTTAAGGCCTTTGTACACGTAAATTGATGAGTCTTCCTTGCAATCCCCGCCTAGTAAATTTCACGTTCATGTTATTTGTGTTTTATATTGTTTGAAGCAATTTTACAGACAAGGAAGATTATTCTTGACACTATAGCTCTACATGATTCGATGAGTCTTCTACGTCCCGGTCTTTGCCCAATAGTCATCATTGCATAGGTACCCGAAATATGTGCTTGGGTACTGGTTTAAATATTTGATTTCTGACAAGCTTGGTATCTAGAATAAAAGCAATGTTTCAGAACCCCATCAATTTTGATTGATGAGAAAAAGTGAAGCAGTTGCATCAGCTGAGGAATTCTATTATTCTCTTCTTTGCGTTAATGTTATTTGGTATTAGAAAACTTTAGTTATGAATGCAAGGTACCCATTAAATTAGTTTTGTGTTTAGGTGTTTCATGTTTGCTGATAATGACTTCTCTGGCTACCAAAGGACTTCCACATATATGTAGTCAATTTATTTGACACTGCGAAGGTGAGGATATGCTTTTTAAAGAAGAAATATTTACCCTTATATAAGGAAAATATCGGAAGCTATGCACTTCTCATGTGTGAAAGAGTGAGAGGTCTTCTCTTTTTTTCCCTGTTTCATCTTTGTGCTTGATTGTACAATGTAGCCTGTGAAGTGCTGTCAAAACCTCAGAAGTTCACTGGCCCTACTTACTTAGAAACTTATTGTGAGGTAGCTACGACACAAAATTGTTGCAGGTTGACATCTTGCTGGAAAATGCACTATGCTGTATGAGAATCAACATCTTGATCATCTGATTTCGTATGTAAGATAACTATAGTGGTTGTAGGCATTTGATGCTGAAATATTAATTTTCCTGATTATACTTATAAGAATTTGTGAAACAAGCATTTTATAACATGTCTATCGTCATGTTCTATTCTATTTGAAAATAGTGACGTCGCACTAGTTGCATGTTTGACTGTCCAAGATTGCCATAGAGCTATTTCAAATGATGTGTAAATTTACTAAACCTATTTTACTTACAGCCTCAACTTAAATAAGGTAAGGATTGATCATATCCTATCTTGTTATACATATAACAGCCTTTTTGGTCTTGCTTATTTGTGGTTACTCATTAATGGTCAGCGAGAAGATTGGAGACAGAGACCCCTATCAGAAGATATGGTGCGGTATGCTAGGACAGATGCCCACTACCTCCTACATATTGCAAACTGTTTACTTTTTGAGCTGAAACAGGTTAATGGTATGTCTTGGATCCGTTTGTGTTTGCTGCCATTCATTATTTTTTTTGTATAAGTTGTACTGTAAATGTGGAGAAATAAAAATGGATGGAAGATGAACATGATGATAACTAGAAATAAGGAAGAAAATAGGGCCACACTCGAGTAATGTATTAAAAGATTTTGTTAACTTACCATTGTGCAGTTTTCATAATAGATTCAACAGTGCAAATATTATCATCGATATTTTTTTTTAACATTAATGTCTTAATATCGGTGAGCCACATTTCTCTTCCATCTTCTGAAGATGTGAAATTTTTTAATTAAAAAATGGTTTTAGAAATTGATTCACGCGCATTCTTTTTATGGTATGGTAGACAAAATGTAGAATAATGTATAATTTATTTGAGTGGCTTTAAAATTTTATTTATCAATTCAATTTTATTTTTCTTATGAACTACAATGATTTCGTTATTTTTTTTAGGATTGTTCTTTGATACTCAGCATCCATGTTCCATTAAGTTTGAGATTTTGATATTTTGGTTGATATCGATATATCAATATTTACTTCTTGCTCGTTCTTTGCCTATTCCCATTTCTCATATCATGACTTTGACATTTTCATCTTTGATTACTCCAAACATTCGGGAAAAAAGTTTTAGCCTTTAAGGCCAGAGGCAGAGTAATTAACATTTTAGTTGGCTACCTTCAAATTATATATCATCCCATATCATTAGATATCTAAATGCATTAATGTAGCAGAAAACTCTTCCACCGATGGTAAATTCAATTTTCTTCTTGAGGCTAGTCGGCGATCAAACATGATTTGTTTGCAACTTTACACAAAAGAGACTGAAGGTTCTCCTGGAGAGTCTGCTGCATCATCAATATGTTACCGTCATCTAAACAGTCAATTAAATTCCTTTAAAACTCAAGTGAGCTGCTTTCTCAACAACTTTGATGTTATATCATTTGAAGTAGTACCACAATACAAAATTTTGAAATTCTATTACCTGACTTTGAACTTTCAGTTTCAGGATCATGTGAGGAGATTATGTGCTTGGCGAGACTTAATGGTCAGTAGTTAATCATCATAAAAAAATGAAGAACATAATTGCTTATTCTCTAAGCTTTTTATATTTATTTTATTTTGAATTTTTATCAATTTGATCTTACTCCGTTAGGTATTTTATGTCTAAGGGGGTTTCGTGTTTTCTAATTGAGAAGGAACCATTTTGGTACTCAGTAATAGCTTGTGTTAATTCTTTATAGGATGGACGCTAGGGTTTGGTTCACTAAGTGTTTTAAGACTCGCAAGATTCCCCTAAAATTTCATCTATAAATGTAAATATTCGATGGGAGAGCATTTTCATTTCAAAATTTGTATAATGGTATGGTCGAAGAAGACTTCTATTAGGCAACCGTGGGCTTTTCCACCAACCTCTAATAGTAGTTTTTCTCTTAATATCGAATGTGCCCACCTCTAAAAAGTTGATATTGACCTTTTACTGTAAATACTCCCACAGTAGTTGGTTGCTTAGGTTGAGAAGTAACCTTCCAGATGGCGAGACAGAAGATTGGGTCTCTGTGATGAACTCTTTGGAAGTTTAATCATGACACCTTAGTGAGGATCCAAATTTTATTGTATGAAGATTGGTTGTTTATTTATTTATTTTTTGATAGGAAACAAAAGAAAATTAAATGAAAGAAGATTGGACGTTAAAGGAGCATACTTGACTATGTTGTTCTATAGTCATCTTACAAATAGGGAAAATCTTTTTTCTAAATAGGTGGCTAGAGTTATAGGCAGGAATACATATTCCAAAAAGGTCAAAATCTTTATATGGTCTCTAGTTCTAAAAGACGGCTGTCATTTGAAAGAGAAATGATCTCAATTGCCTCTTTCCAATTTGGCTAAAAATTAGACATCCTGAAGGTTAGACTTGTTATTTCATCGTTGAGCCTGACTCATTACCACCTTTGTTGCCGGTTCCTTCTGCTTATAAGGACCATAATAAGTAAATTAACTATGATGGTTGCTTTTTAGCAAACGGAAGTTCCGCTATGGCTGCTTACCTGAATCTGAGATTGTCATTTCATTTCAGGCTCGAGTTCATGATGAGAGCCTGAGATATGTGTTGTCAGATCAGGCTATTGTAGCTCTTGCTACTCAAATGTCAAAAAATACGAGGGAGTTATATGCAACTATTGCACAAGCTGATTTGAATGTGGATTTGAGCCCGAGTCTGCTTCTTCCAGGCCCCTCCCCTGTTGTTTGTAGCCATTTGGATGATCTCCACTGTCTTCTCCGTGACAAGTCTGGTGACCTGGATAATATATTTTTGGGGATTTTACAAAACTGTATAGGTTCTAATGGCAGTTGTCCCCTTTCTATATTTAATTATGCCCTGTTGGTCAAGTATAATCTAAAAATGATGACAATATCTAGAAAAAATGATAGAAGAAACGCAAAGAAAATGTCTAAAAAAGCTTCTAGAGAGCTTTTTGTGCAGAAGTTCTCCTGCAAATCTCCAGTTTATCATAATTGTAGGATTTATGCAAATGATGGGCGCTTGCTTTGCTACTGTGATCGGCGAAAACTTGAATGGTTGGTTAGCATCTCTTAGTTTTATTTCATGCAAGTTATAATTAAAACTGGTTATGCAATTGTGTTTGACAACATGCAACTATCTTTGTATTTAAACAGGTATTTGCGGCGAGAGTTGGCAGAGCTTGTTGATGATGATCCTCCTGCCATAAAGATTCTTTTTGAACCTAAAGGCCGTCCAGAAGATGAGGGCAATGACTTTTATATCCAGAGCAAAAAGAATATATGTGTTGGTTGTGGTGAAGGAAACCACTATTTACGTTATCGAATAATCCCCTCATGCTACAGAATACATTTTCCTGAGCATTTAAAAAGTCATCGTTCCCATGATATTGTCTTACTTTGTGTGGATTGTCATGAAGTTGCCCATGCTGCTGCTGAGAAGCACAAGAGAAATCTTGCTGCAGAATTTGGAATTCCACTTTTTGTTCGTAGGGTGGTTGATACCAAGGAGGCCTTTGATTTAGTTGAGTCATCTGACTCGGCCACCAACTTTCAGGAGGAAGGTGTGTCACCTTTAGAATTAAGAACAGCTGCTATGGCCCTGTTGCGGCATGGACCAAGGATGCCACCAAAACGTCAAGAGGAACTCATGCATGTATGTGTTGTATACTTTGCAATTGAGATAGTCTTCGTATATGTGTCTATGTATATGTGTCCATGTGATTTAGAAATAAACATGCAGTTCAATGCTTGAGATACTAATAATTGACTCGAGTCATCTGCTATCATAGCCATTGAAAAGATCTTTGGTTTCATGATATCAAATGCTTAATCATTTAATAGTGCTCCATCTTGGTAGAAATTTATCATTCAAGATTTTCTTGGTGCTATAGGATTAAATTAATCATCAATTATAGTAATTAGCATGTTTTCATATTCTCCATCAGTAGTTTGAGACGGTGAAGAAGGTCCTGAACATCATTCATTAGTCTGCTGTAGGTATTGGCCCTTTGTAGACAATGGTTTTTAGTTATGTAGTTCCCATTTTTGTAGAATCTTCAGTAACACCCGGTAATTGTTGATTATCAATCCCTCTGAAATTCAAATTATATATTTTCCTCATCTCTCCTATCTTTGTTGTGTTTTCAGGTTGTTATGAGATACTATGGGCGGAGGGAGATATCTGAAGAAGATTTGGAAAAGGCTCTGCTTGTTGGCATGAGTCCTCATGAGAGAAGACGACTTCAGAAGAAAAAGGGTATAGCTTTGAAACATTCAGGACAGCATATTTTTCCAGATGCTGAGCATCAGAATGGTGCTTGTAGCATTGACTCATCGACTGTGACTAATTCATCCATTGGTATGTGCAGACTAGTTCACTTTTGCTGATACATGCATTTTGCATGCAAAGATAAAATGTTGTTCATAAGGGCGGAAAATAAGTACTTCAAGCAGTCATTCTTTCTGTTCTAATTCAATGCAGATGCAGATGCAGATGTTAACAATCACATGAACTCAGATAATGGTACCGTGCCCGAGACATGTTTGCCTTGTGGAGAGGTCAAAGTTTCTGATAACGGCTCCACCATAACTGCTCAACCTAAATTCAATTCTAAATTGTCACTCTTGGGACATGGACCACATGGTAAACAAGTAGTGGATCATCTACTTGCAGAATATGGCGAGGATGGCATCCGACAGTTTTGTCAAAGGTGGAGACAAGTCTTTGTTGCTGCTATTCAACCTCGTTTCTTACCCGCTGGTTGGGATGTCAACCACAGGTACACTGAATTACTTAATTTCAACTCCAAGCTTCAAAATGGGAGCACATTGCATGTCTCTTTTATGCTAACATTTCTTGTCTTATATAAAAATGATTATCATTTCTTACCTTGTAAGGCATTGCACTATTTCAGTACCAATTACACTTCAAAGAGTGTTTGGGGCTGGGTAGAGTTAATAACTCCACTCCAACGTAAATTAGAGTACTACGTAACAGTTTTTTAATCCATAAAAATCTCCCTATCTCCTTCCGCATGTCATCTACAAATTTACAATTTTTTTTTTTTTTGAAGTTTTGTTATGTTCATATTGTCAGTATTATTGGAATGGTCTGATTTGTGGACACTAGAAAGTTCCACTTCTTTTTTGTTCCAGTGGTAGAAGGGACTTCGGCGAATTCAGTGTGTACAATTCTATAAAGAAACTTTCCCCTACTATTGAGTAGGACCATTTGAAGCACTGCAAAATTCTCATGTTGCATGTAATGCCAGCATCACATTCTATGCTAGGAATTAGCAGATTATCTTCTCGTCATTCCCACAAGTAAAATCTCTCCATTTGAATGGTGCACGTTATGTTTCTGTTATTTTTAATGTCTCTGCACTGAGGAAGTTGGTTTATTCAACTTTGTGCAGATTTTGTGTATTAAAAGATTAAGATGGCGGCATTGTCCTTGTCCCCATCTTGTGAGACTTTCATCTCTCTTTCTTAACTGGCTTCATGCTTGGCTCTGGATTTTTTTGACTAAACATTCTTGAATTATTTAGCATAGCTTAGCGGATATAATTTGCAAAGGAAGGGAACTGCAGTAGAGCTTACCTACAATTTAAATGGAATTCATTACTGAAGTCATTTCCAGGTAAACGA

mRNA sequence

AAAAAACGAAGGAAAAACGAGAACGAGCCATTGATTCTAATGGAGCTTCATCGCAAGGCCAAAATCGCTTTAGTTGTAGCGTCTCTTGCAGCGCTAACAATCTACTTTACGGCCAGACGGCGCCGGAAGCAGAGGAGCGTTCGTAGTTCGTGTTATTTGCGAGATGATCAGAAGCCTCAGTACGCATTTAAACGCGTCTTGGCGACAATTTCCTTATTCTGCGTTCAAAACATTTGAAGCTCGATATGAATACAGACAATATTGTAACTCTCATCCCCTACGAATCAGAAATACTCTCGGAACTTCTTCGCAGAATTTGATTTATTAGTAGTGGAAAGAAACGATTTACCCTTGAGTGACACTTATGTTTGGGTTGAGACCGCTTCTCAATTGAAGAGACTCGTGATGTGTTGAATAAGAAATGGTGTTTGCTGTTGATACCGAGCAGCACAGTCTAAGATCTTCTTGCTGGCTTCACTGCTTTAGTTACAGCAATTTTACAGACAAGGAAGATTATTCTTGACACTATAGCTCTACATGATTCGATGAGTCTTCTACGTCCCGGTCTTTGCCCAATAGTCATCATTGCATAGGTGTTTCATGTTTGCTGATAATGACTTCTCTGGCTACCAAAGGACTTCCACATATATGTAGTCAATTTATTTGACACTGCGAAGCCTGTGAAGTGCTGTCAAAACCTCAGAAGTTCACTGGCCCTACTTACTTAGAAACTTATTGTGAGGTAGCTACGACACAAAATTGTTGCAGCGAGAAGATTGGAGACAGAGACCCCTATCAGAAGATATGGTGCGGTATGCTAGGACAGATGCCCACTACCTCCTACATATTGCAAACTGTTTACTTTTTGAGCTGAAACAGGTTAATGAAAACTCTTCCACCGATGGTAAATTCAATTTTCTTCTTGAGGCTAGTCGGCGATCAAACATGATTTGTTTGCAACTTTACACAAAAGAGACTGAAGGTTCTCCTGGAGAGTCTGCTGCATCATCAATATGTTACCGTCATCTAAACAGTCAATTAAATTCCTTTAAAACTCAATTTCAGGATCATGTGAGGAGATTATGTGCTTGGCGAGACTTAATGGCTCGAGTTCATGATGAGAGCCTGAGATATGTGTTGTCAGATCAGGCTATTGTAGCTCTTGCTACTCAAATGTCAAAAAATACGAGGGAGTTATATGCAACTATTGCACAAGCTGATTTGAATGTGGATTTGAGCCCGAGTCTGCTTCTTCCAGGCCCCTCCCCTGTTGTTTGTAGCCATTTGGATGATCTCCACTGTCTTCTCCGTGACAAGTCTGGTGACCTGGATAATATATTTTTGGGGATTTTACAAAACTGTATAGGTTCTAATGGCAGTTGTCCCCTTTCTATATTTAATTATGCCCTGTTGGTCAAGTATAATCTAAAAATGATGACAATATCTAGAAAAAATGATAGAAGAAACGCAAAGAAAATGTCTAAAAAAGCTTCTAGAGAGCTTTTTGTGCAGAAGTTCTCCTGCAAATCTCCAGTTTATCATAATTGTAGGATTTATGCAAATGATGGGCGCTTGCTTTGCTACTGTGATCGGCGAAAACTTGAATGGTATTTGCGGCGAGAGTTGGCAGAGCTTGTTGATGATGATCCTCCTGCCATAAAGATTCTTTTTGAACCTAAAGGCCGTCCAGAAGATGAGGGCAATGACTTTTATATCCAGAGCAAAAAGAATATATGTGTTGGTTGTGGTGAAGGAAACCACTATTTACGTTATCGAATAATCCCCTCATGCTACAGAATACATTTTCCTGAGCATTTAAAAAGTCATCGTTCCCATGATATTGTCTTACTTTGTGTGGATTGTCATGAAGTTGCCCATGCTGCTGCTGAGAAGCACAAGAGAAATCTTGCTGCAGAATTTGGAATTCCACTTTTTGTTCGTAGGGTGGTTGATACCAAGGAGGCCTTTGATTTAGTTGAGTCATCTGACTCGGCCACCAACTTTCAGGAGGAAGGTGTGTCACCTTTAGAATTAAGAACAGCTGCTATGGCCCTGTTGCGGCATGGACCAAGGATGCCACCAAAACGTCAAGAGGAACTCATGCATGTTGTTATGAGATACTATGGGCGGAGGGAGATATCTGAAGAAGATTTGGAAAAGGCTCTGCTTGTTGGCATGAGTCCTCATGAGAGAAGACGACTTCAGAAGAAAAAGGGTATAGCTTTGAAACATTCAGGACAGCATATTTTTCCAGATGCTGAGCATCAGAATGGTGCTTGTAGCATTGACTCATCGACTGTGACTAATTCATCCATTGATGCAGATGCAGATGTTAACAATCACATGAACTCAGATAATGGTACCGTGCCCGAGACATGTTTGCCTTGTGGAGAGGTCAAAGTTTCTGATAACGGCTCCACCATAACTGCTCAACCTAAATTCAATTCTAAATTGTCACTCTTGGGACATGGACCACATGGTAAACAAGTAGTGGATCATCTACTTGCAGAATATGGCGAGGATGGCATCCGACAGTTTTGTCAAAGGTGGAGACAAGTCTTTGTTGCTGCTATTCAACCTCGTTTCTTACCCGCTGGTTGGGATGTCAACCACAGTGGTAGAAGGGACTTCGGCGAATTCAGTGTGTACAATTCTATAAAGAAACTTTCCCCTACTATTGAGTAGGACCATTTGAAGCACTGCAAAATTCTCATGTTGCATGTAATGCCAGCATCACATTCTATGCTAGGAATTAGCAGATTATCTTCTCGTCATTCCCACAAATTTTGTGTATTAAAAGATTAAGATGGCGGCATTGTCCTTGTCCCCATCTTCATAGCTTAGCGGATATAATTTGCAAAGGAAGGGAACTGCAGTAGAGCTTACCTACAATTTAAATGGAATTCATTACTGAAGTCATTTCCAGGTAAACGA

Coding sequence (CDS)

ATGGTGCGGTATGCTAGGACAGATGCCCACTACCTCCTACATATTGCAAACTGTTTACTTTTTGAGCTGAAACAGGTTAATGAAAACTCTTCCACCGATGGTAAATTCAATTTTCTTCTTGAGGCTAGTCGGCGATCAAACATGATTTGTTTGCAACTTTACACAAAAGAGACTGAAGGTTCTCCTGGAGAGTCTGCTGCATCATCAATATGTTACCGTCATCTAAACAGTCAATTAAATTCCTTTAAAACTCAATTTCAGGATCATGTGAGGAGATTATGTGCTTGGCGAGACTTAATGGCTCGAGTTCATGATGAGAGCCTGAGATATGTGTTGTCAGATCAGGCTATTGTAGCTCTTGCTACTCAAATGTCAAAAAATACGAGGGAGTTATATGCAACTATTGCACAAGCTGATTTGAATGTGGATTTGAGCCCGAGTCTGCTTCTTCCAGGCCCCTCCCCTGTTGTTTGTAGCCATTTGGATGATCTCCACTGTCTTCTCCGTGACAAGTCTGGTGACCTGGATAATATATTTTTGGGGATTTTACAAAACTGTATAGGTTCTAATGGCAGTTGTCCCCTTTCTATATTTAATTATGCCCTGTTGGTCAAGTATAATCTAAAAATGATGACAATATCTAGAAAAAATGATAGAAGAAACGCAAAGAAAATGTCTAAAAAAGCTTCTAGAGAGCTTTTTGTGCAGAAGTTCTCCTGCAAATCTCCAGTTTATCATAATTGTAGGATTTATGCAAATGATGGGCGCTTGCTTTGCTACTGTGATCGGCGAAAACTTGAATGGTATTTGCGGCGAGAGTTGGCAGAGCTTGTTGATGATGATCCTCCTGCCATAAAGATTCTTTTTGAACCTAAAGGCCGTCCAGAAGATGAGGGCAATGACTTTTATATCCAGAGCAAAAAGAATATATGTGTTGGTTGTGGTGAAGGAAACCACTATTTACGTTATCGAATAATCCCCTCATGCTACAGAATACATTTTCCTGAGCATTTAAAAAGTCATCGTTCCCATGATATTGTCTTACTTTGTGTGGATTGTCATGAAGTTGCCCATGCTGCTGCTGAGAAGCACAAGAGAAATCTTGCTGCAGAATTTGGAATTCCACTTTTTGTTCGTAGGGTGGTTGATACCAAGGAGGCCTTTGATTTAGTTGAGTCATCTGACTCGGCCACCAACTTTCAGGAGGAAGGTGTGTCACCTTTAGAATTAAGAACAGCTGCTATGGCCCTGTTGCGGCATGGACCAAGGATGCCACCAAAACGTCAAGAGGAACTCATGCATGTTGTTATGAGATACTATGGGCGGAGGGAGATATCTGAAGAAGATTTGGAAAAGGCTCTGCTTGTTGGCATGAGTCCTCATGAGAGAAGACGACTTCAGAAGAAAAAGGGTATAGCTTTGAAACATTCAGGACAGCATATTTTTCCAGATGCTGAGCATCAGAATGGTGCTTGTAGCATTGACTCATCGACTGTGACTAATTCATCCATTGATGCAGATGCAGATGTTAACAATCACATGAACTCAGATAATGGTACCGTGCCCGAGACATGTTTGCCTTGTGGAGAGGTCAAAGTTTCTGATAACGGCTCCACCATAACTGCTCAACCTAAATTCAATTCTAAATTGTCACTCTTGGGACATGGACCACATGGTAAACAAGTAGTGGATCATCTACTTGCAGAATATGGCGAGGATGGCATCCGACAGTTTTGTCAAAGGTGGAGACAAGTCTTTGTTGCTGCTATTCAACCTCGTTTCTTACCCGCTGGTTGGGATGTCAACCACAGTGGTAGAAGGGACTTCGGCGAATTCAGTGTGTACAATTCTATAAAGAAACTTTCCCCTACTATTGAGTAG

Protein sequence

MVRYARTDAHYLLHIANCLLFELKQVNENSSTDGKFNFLLEASRRSNMICLQLYTKETEGSPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVALATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLDNIFLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISRKNDRRNAKKMSKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAAAEKHKRNLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRHGPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQHIFPDAEHQNGACSIDSSTVTNSSIDADADVNNHMNSDNGTVPETCLPCGEVKVSDNGSTITAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWDVNHSGRRDFGEFSVYNSIKKLSPTIE

Homology

[Close]

BLAST of Carg27537 vs. NCBI nr
Match: XP_022930824.1 (protein RRP6-like 3 isoform X2 [Cucurbita moschata])

HSP 1 Score: 1265.4 bits (3273), Expect = 0.0e+00
Identity = 622/627 (99.20%), Postives = 624/627 (99.52%), Query Frame = 0


Query: 1   MVRYARTDAHYLLHIANCLLFELKQVN-ENSSTDGKFNFLLEASRRSNMICLQLYTKETE 60
           MVRYARTDAHYLLHIANCLL ELKQVN ENSSTDGKFNFLLEASRRSNMICLQLYTKETE
Sbjct: 256 MVRYARTDAHYLLHIANCLLSELKQVNAENSSTDGKFNFLLEASRRSNMICLQLYTKETE 315

Query: 61  GSPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVA 120
           GSPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAI+A
Sbjct: 316 GSPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIIA 375

Query: 121 LATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLDNIF 180
           LATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLDNIF
Sbjct: 376 LATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLDNIF 435

Query: 181 LGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISRKNDRRNAKKMSKKASRELFVQKFS 240
           LGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTIS+KNDRRNAKKMSKKASRELFVQKFS
Sbjct: 436 LGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKKNDRRNAKKMSKKASRELFVQKFS 495

Query: 241 CKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEG 300
           CKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEG
Sbjct: 496 CKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEG 555

Query: 301 NDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHA 360
           NDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHA
Sbjct: 556 NDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHA 615

Query: 361 AAEKHKRNLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLR 420
           AAEKHKRNLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLR
Sbjct: 616 AAEKHKRNLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLR 675

Query: 421 HGPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQ 480
           HGPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQ
Sbjct: 676 HGPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQ 735

Query: 481 HIFPDAEHQNGACSIDSSTVTNSSIDADADVNNHMNSDNGTVPETCLPCGEVKVSDNGST 540
           HIFPDAEHQNGACSIDSSTVTNSSIDADADVNNHMNSDNGTVPETCLPCGEVKVSDNGS 
Sbjct: 736 HIFPDAEHQNGACSIDSSTVTNSSIDADADVNNHMNSDNGTVPETCLPCGEVKVSDNGSA 795

Query: 541 ITAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGW 600
           ITAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGW
Sbjct: 796 ITAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGW 855

Query: 601 DVNHSGRRDFGEFSVYNSIKKLSPTIE 627
           DVNHSGRRDFGEFSVYNSIKKLSPTIE
Sbjct: 856 DVNHSGRRDFGEFSVYNSIKKLSPTIE 882

[Close]

BLAST of Carg27537 vs. NCBI nr
Match: XP_022930823.1 (protein RRP6-like 3 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1253.8 bits (3243), Expect = 0.0e+00
Identity = 617/628 (98.25%), Postives = 619/628 (98.57%), Query Frame = 0


Query: 1   MVRYARTDAHYLLHIANCLLFELKQVNENSSTDGKFNFLLEASRRSNMICLQLYTKETEG 60
           MVRYARTDAHYLLHIANCLL ELKQVNENSSTDGKFNFLLEASRRSNMICLQLYTKETEG
Sbjct: 256 MVRYARTDAHYLLHIANCLLSELKQVNENSSTDGKFNFLLEASRRSNMICLQLYTKETEG 315

Query: 61  SPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVAL 120
           SPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAI+AL
Sbjct: 316 SPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIIAL 375

Query: 121 ATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLDNIFL 180
           ATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLDNIFL
Sbjct: 376 ATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLDNIFL 435

Query: 181 GILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISRKNDRRNAKKMSKKASRELFVQKFSC 240
           GILQNCIGSNGSCPLSIFNYALLVKYNLKMMTIS+KNDRRNAKKMSKKASRELFVQKFSC
Sbjct: 436 GILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKKNDRRNAKKMSKKASRELFVQKFSC 495

Query: 241 KSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGN 300
           KSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGN
Sbjct: 496 KSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGN 555

Query: 301 DFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAA 360
           DFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAA
Sbjct: 556 DFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAA 615

Query: 361 AEKHKRNLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRH 420
           AEKHKRNLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRH
Sbjct: 616 AEKHKRNLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRH 675

Query: 421 GPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQH 480
           GPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQH
Sbjct: 676 GPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQH 735

Query: 481 IFPDAEHQNGACSIDSSTVTNSSID--ADADVNNHMNSDNGTVPETCLPCGEVKVSDNGS 540
           IFPDAEHQNGACSIDSSTVTNSSID       NNHMNSDNGTVPETCLPCGEVKVSDNGS
Sbjct: 736 IFPDAEHQNGACSIDSSTVTNSSIDXXXXXXXNNHMNSDNGTVPETCLPCGEVKVSDNGS 795

Query: 541 TITAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAG 600
            ITAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAG
Sbjct: 796 AITAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAG 855

Query: 601 WDVNHSGRRDFGEFSVYNSIKKLSPTIE 627
           WDVNHSGRRDFGEFSVYNSIKKLSPTIE
Sbjct: 856 WDVNHSGRRDFGEFSVYNSIKKLSPTIE 883

[Close]

BLAST of Carg27537 vs. NCBI nr
Match: XP_023531760.1 (protein RRP6-like 3 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1253.8 bits (3243), Expect = 0.0e+00
Identity = 614/626 (98.08%), Postives = 621/626 (99.20%), Query Frame = 0


Query: 1   MVRYARTDAHYLLHIANCLLFELKQVNENSSTDGKFNFLLEASRRSNMICLQLYTKETEG 60
           MVRYARTDAHYLLHIANCLL ELKQVNENSSTDGKFNFLLEASRRSNMICLQLYTKETEG
Sbjct: 256 MVRYARTDAHYLLHIANCLLSELKQVNENSSTDGKFNFLLEASRRSNMICLQLYTKETEG 315

Query: 61  SPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVAL 120
           SPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVAL
Sbjct: 316 SPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVAL 375

Query: 121 ATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLDNIFL 180
           ATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLR+KSGDLDNIFL
Sbjct: 376 ATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLREKSGDLDNIFL 435

Query: 181 GILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISRKNDRRNAKKMSKKASRELFVQKFSC 240
           GILQNCIGSNGSCPLSIFNYALLVKYNLKMMTIS+KNDRRNAKKMSKKASRELFVQKFSC
Sbjct: 436 GILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKKNDRRNAKKMSKKASRELFVQKFSC 495

Query: 241 KSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGN 300
           KSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGN
Sbjct: 496 KSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGN 555

Query: 301 DFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAA 360
           DFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAA
Sbjct: 556 DFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAA 615

Query: 361 AEKHKRNLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRH 420
           AEKHKR+LAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRH
Sbjct: 616 AEKHKRDLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRH 675

Query: 421 GPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQH 480
           GPRMPPKRQEELM VVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQH
Sbjct: 676 GPRMPPKRQEELMLVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQH 735

Query: 481 IFPDAEHQNGACSIDSSTVTNSSIDADADVNNHMNSDNGTVPETCLPCGEVKVSDNGSTI 540
           IFPDAEHQNGACSIDSST+TNSSIDAD DVNNH+NSDNGTVPETCLPCGEVKVSDNGS I
Sbjct: 736 IFPDAEHQNGACSIDSSTMTNSSIDADPDVNNHLNSDNGTVPETCLPCGEVKVSDNGSAI 795

Query: 541 TAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWD 600
           TAQPKFN KLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWD
Sbjct: 796 TAQPKFNPKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGWD 855

Query: 601 VNHSGRRDFGEFSVYNSIKKLSPTIE 627
           VNHSG+RDFGEFSVYNSIK+LSPTIE
Sbjct: 856 VNHSGKRDFGEFSVYNSIKQLSPTIE 881

[Close]

BLAST of Carg27537 vs. NCBI nr
Match: XP_023531755.1 (protein RRP6-like 3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531756.1 protein RRP6-like 3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531758.1 protein RRP6-like 3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531759.1 protein RRP6-like 3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1250.7 bits (3235), Expect = 0.0e+00
Identity = 615/628 (97.93%), Postives = 622/628 (99.04%), Query Frame = 0


Query: 1   MVRYARTDAHYLLHIANCLLFELKQVNENSSTDGKFNFLLEASRRSNMICLQLYTKETEG 60
           MVRYARTDAHYLLHIANCLL ELKQVNENSSTDGKFNFLLEASRRSNMICLQLYTKETEG
Sbjct: 256 MVRYARTDAHYLLHIANCLLSELKQVNENSSTDGKFNFLLEASRRSNMICLQLYTKETEG 315

Query: 61  SPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVAL 120
           SPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVAL
Sbjct: 316 SPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVAL 375

Query: 121 ATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLDNIFL 180
           ATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLR+KSGDLDNIFL
Sbjct: 376 ATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLREKSGDLDNIFL 435

Query: 181 GILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISRKNDRRNAKKMSKKASRELFVQKFSC 240
           GILQNCIGSNGSCPLSIFNYALLVKYNLKMMTIS+KNDRRNAKKMSKKASRELFVQKFSC
Sbjct: 436 GILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKKNDRRNAKKMSKKASRELFVQKFSC 495

Query: 241 KSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGN 300
           KSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGN
Sbjct: 496 KSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGN 555

Query: 301 DFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAA 360
           DFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAA
Sbjct: 556 DFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAA 615

Query: 361 AEKHKRNLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRH 420
           AEKHKR+LAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRH
Sbjct: 616 AEKHKRDLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRH 675

Query: 421 GPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQH 480
           GPRMPPKRQEELM VVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQH
Sbjct: 676 GPRMPPKRQEELMLVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQH 735

Query: 481 IFPDAEHQNGACSIDSSTVTNSSIDADA--DVNNHMNSDNGTVPETCLPCGEVKVSDNGS 540
           IFPDAEHQNGACSIDSST+TNSSIDADA  DVNNH+NSDNGTVPETCLPCGEVKVSDNGS
Sbjct: 736 IFPDAEHQNGACSIDSSTMTNSSIDADADPDVNNHLNSDNGTVPETCLPCGEVKVSDNGS 795

Query: 541 TITAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAG 600
            ITAQPKFN KLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAG
Sbjct: 796 AITAQPKFNPKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAG 855

Query: 601 WDVNHSGRRDFGEFSVYNSIKKLSPTIE 627
           WDVNHSG+RDFGEFSVYNSIK+LSPTIE
Sbjct: 856 WDVNHSGKRDFGEFSVYNSIKQLSPTIE 883

[Close]

BLAST of Carg27537 vs. NCBI nr
Match: XP_022988685.1 (protein RRP6-like 3 isoform X2 [Cucurbita maxima])

HSP 1 Score: 1246.5 bits (3224), Expect = 0.0e+00
Identity = 613/627 (97.77%), Postives = 618/627 (98.56%), Query Frame = 0


Query: 1   MVRYARTDAHYLLHIANCLLFELKQVN-ENSSTDGKFNFLLEASRRSNMICLQLYTKETE 60
           MVRYARTDAHYLLHIANCLL ELKQVN ENSSTDGKFNFLLEASRRSNMICLQLYTKETE
Sbjct: 256 MVRYARTDAHYLLHIANCLLSELKQVNAENSSTDGKFNFLLEASRRSNMICLQLYTKETE 315

Query: 61  GSPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVA 120
           GSPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAI A
Sbjct: 316 GSPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIAA 375

Query: 121 LATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLDNIF 180
           LATQMSKN+ ELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGD D+IF
Sbjct: 376 LATQMSKNSWELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDPDSIF 435

Query: 181 LGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISRKNDRRNAKKMSKKASRELFVQKFS 240
           LGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTIS+KNDRRNAKKMSKKASRELFVQKFS
Sbjct: 436 LGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKKNDRRNAKKMSKKASRELFVQKFS 495

Query: 241 CKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEG 300
           CKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEG
Sbjct: 496 CKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEG 555

Query: 301 NDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHA 360
           NDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHA
Sbjct: 556 NDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHA 615

Query: 361 AAEKHKRNLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLR 420
           AAEKHKRNLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLR
Sbjct: 616 AAEKHKRNLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLR 675

Query: 421 HGPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQ 480
           HGPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQ
Sbjct: 676 HGPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQ 735

Query: 481 HIFPDAEHQNGACSIDSSTVTNSSIDADADVNNHMNSDNGTVPETCLPCGEVKVSDNGST 540
           HIFPDAEHQNGACSIDSST+TNSSIDADADVNNHMNSDNGTVPETCLPCGEVKV +NGS 
Sbjct: 736 HIFPDAEHQNGACSIDSSTMTNSSIDADADVNNHMNSDNGTVPETCLPCGEVKVPENGSA 795

Query: 541 ITAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGW 600
           ITAQPKFN KLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGW
Sbjct: 796 ITAQPKFNPKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFLPAGW 855

Query: 601 DVNHSGRRDFGEFSVYNSIKKLSPTIE 627
           DVNHSGRRDFGEFSVYNSIKKLSP IE
Sbjct: 856 DVNHSGRRDFGEFSVYNSIKKLSPAIE 882

[Close]

BLAST of Carg27537 vs. TAIR10
Match: AT2G32415.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain)

HSP 1 Score: 771.2 bits (1990), Expect = 5.0e-223
Identity = 392/641 (61.15%), Postives = 490/641 (76.44%), Query Frame = 0


Query: 1   MVRYARTDAHYLLHIANCLLFELKQV-NENSSTDGKFNFLLEASRRSNMICLQLYTKETE 60
           MVRYARTDAHYLL+IA+ L  ELKQ+  ++SS D +F+FLLEASRRSNM CLQLYTKETE
Sbjct: 264 MVRYARTDAHYLLYIADSLTTELKQLATDSSSPDDRFHFLLEASRRSNMTCLQLYTKETE 323

Query: 61  GSPGESAASSICYRHLN--SQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAI 120
             PG +A+SSI YRHLN     ++     ++ VR+LCAWRDLM R+HDES RYVLSDQAI
Sbjct: 324 DFPGSAASSSIIYRHLNGHGDKSNISLNAEELVRKLCAWRDLMGRIHDESTRYVLSDQAI 383

Query: 121 VALATQMSKNTRELYATIAQADLNVDLSPSL--LLPGPSPVVCSHLDDLHCLLRDKSGDL 180
           V L+ +    T E+Y TIA  DL  + SPSL   +  P PV+CSHLDD++ ++ DK   L
Sbjct: 384 VGLSCKQPTTTEEIYDTIAHIDLATESSPSLSSSVQSPYPVICSHLDDIYKMILDKLAKL 443

Query: 181 DNIFLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTIS--RKNDRRNAK-KMSKKASRE 240
           D++   +L+ C+G+NG+CP+S+FNY+LLV +  K+ + S  ++N  +N K + ++KASRE
Sbjct: 444 DDLLPVVLKKCLGTNGTCPISVFNYSLLVNFKTKLSSHSAPKQNGHKNFKQQFTRKASRE 503

Query: 241 LFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPK 300
           LFV+KFSCK+PVYHNCRIYANDGRLLCYCD+RKLEWYL R LA+LV+++PPAI +LFEPK
Sbjct: 504 LFVKKFSCKAPVYHNCRIYANDGRLLCYCDKRKLEWYLNRGLAKLVEENPPAIMLLFEPK 563

Query: 301 GRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVD 360
           GRPEDEGNDFYIQ+K+NICVGCGEG HYLRYRIIPSCYR+HFPEHLKSHRSHDIVLLCVD
Sbjct: 564 GRPEDEGNDFYIQTKRNICVGCGEGKHYLRYRIIPSCYRVHFPEHLKSHRSHDIVLLCVD 623

Query: 361 CHEVAHAAAEKHKRNLAAEFGIPLFVRRVVDTKEA---FDLVESSDSATNFQEEGVSPLE 420
           CHEVAHAAAE++K+ +A EFGIPLFVRRV+D+KEA     LVE  +S  + ++ GVSPL 
Sbjct: 624 CHEVAHAAAERYKKQIATEFGIPLFVRRVLDSKEAQGTSSLVE-DESTGDSEDAGVSPLH 683

Query: 421 LRTAAMALLRHGPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKK 480
           LR+AAMALLRHG RMP  R+EEL+  V  YYG R++SEEDLEKALL+G+SPHERR+L++K
Sbjct: 684 LRSAAMALLRHGNRMPSSRREELLQTVKMYYGGRDLSEEDLEKALLIGLSPHERRKLERK 743

Query: 481 KGIALKHSGQHIFPDAEHQNGACSIDSSTVTNSSIDADADVNNHMNSDNGTVPE-----T 540
           KG++ KHS +              +D     N+  +A AD    M  +  TV +     T
Sbjct: 744 KGVSFKHSAE-----------VAGMDKQEDENNDGEALADFEKIMTVERSTVVDDSGDGT 803

Query: 541 CLPCGEVKVSD---NGSTITAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQR 600
               G  +++D   NG+T+  Q   NSKLSLLGHGPHGKQ+V++LL E+GEDG+R FCQR
Sbjct: 804 SEGDGAKELNDTQCNGNTLHQQ---NSKLSLLGHGPHGKQIVEYLLREHGEDGVRDFCQR 863

Query: 601 WRQVFVAAIQPRFLPAGWDVNHSGRRDFGEFSVYNSIKKLS 623
           WR+VFV A+ PR LP GW+V+HSGRRDFGEFSVYN  K+LS
Sbjct: 864 WRKVFVDAVHPRHLPGGWNVSHSGRRDFGEFSVYNPTKRLS 889

[Close]

BLAST of Carg27537 vs. TAIR10
Match: AT5G35910.1 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain)

HSP 1 Score: 71.6 bits (174), Expect = 1.9e-12
Identity = 50/135 (37.04%), Postives = 71/135 (52.59%), Query Frame = 0


Query: 1   MVRYARTDAHYLLHIANCLLFELKQV-NENSSTDGKFNFLLEASRRSNMICLQLYTKE-- 60
           M RYAR D HYLL+I + +  EL+++  +++ TD     LLE  +RS  +C QLY KE  
Sbjct: 406 MTRYAREDTHYLLYIYDLIKLELQRMAKDDAHTDSP---LLEVYKRSYDVCTQLYEKELL 465

Query: 61  TEGSPGESAASSICYRHL-NSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQA 120
           TE S          Y H+   Q   F       V  LC WRD +AR  DES  YVL ++ 
Sbjct: 466 TENS----------YLHVYGLQAAGFNAAQLAIVAGLCEWRDFIARAEDESTGYVLPNKV 525

Query: 121 IVALATQMSKNTREL 132
           ++ +A +M  +  +L
Sbjct: 526 LLEIAKEMPDSVGKL 527

[Close]

BLAST of Carg27537 vs. TAIR10
Match: AT1G54440.2 (Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain)

HSP 1 Score: 63.9 bits (154), Expect = 4.0e-10
Identity = 44/125 (35.20%), Postives = 62/125 (49.60%), Query Frame = 0


Query: 1   MVRYARTDAHYLLHIANCLLFEL-KQVNENSSTDGKFNFLLEASRRSNMICLQLYTKETE 60
           M RYAR D HYLL+I + +  EL     E+  +D     L+E  +RS  +C+QLY KE  
Sbjct: 261 MKRYAREDTHYLLYIYDVMRMELHTMAKEDEQSDSP---LVEVYKRSYDVCMQLYEKELW 320

Query: 61  GSPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVA 120
                     +   +LN+   S        V  LC WRD +AR  DES  YVL ++ +  
Sbjct: 321 TRDSYLHVYGVQTGNLNAVQLSI-------VAGLCEWRDRIARADDESTGYVLPNKTLFD 375

Query: 121 LATQM 125
           +A +M
Sbjct: 381 IAKEM 375

[Close]

BLAST of Carg27537 vs. Swiss-Prot
Match: sp|A9LLI8|RP6L3_ARATH (Protein RRP6-like 3 OS=Arabidopsis thaliana OX=3702 GN=RRP6L3 PE=2 SV=1)

HSP 1 Score: 770.8 bits (1989), Expect = 1.2e-221
Identity = 392/642 (61.06%), Postives = 490/642 (76.32%), Query Frame = 0


Query: 1   MVRYARTDAHYLLHIANCLLFELKQV--NENSSTDGKFNFLLEASRRSNMICLQLYTKET 60
           MVRYARTDAHYLL+IA+ L  ELKQ+   ++SS D +F+FLLEASRRSNM CLQLYTKET
Sbjct: 264 MVRYARTDAHYLLYIADSLTTELKQLATEDSSSPDDRFHFLLEASRRSNMTCLQLYTKET 323

Query: 61  EGSPGESAASSICYRHLN--SQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQA 120
           E  PG +A+SSI YRHLN     ++     ++ VR+LCAWRDLM R+HDES RYVLSDQA
Sbjct: 324 EDFPGSAASSSIIYRHLNGHGDKSNISLNAEELVRKLCAWRDLMGRIHDESTRYVLSDQA 383

Query: 121 IVALATQMSKNTRELYATIAQADLNVDLSPSL--LLPGPSPVVCSHLDDLHCLLRDKSGD 180
           IV L+ +    T E+Y TIA  DL  + SPSL   +  P PV+CSHLDD++ ++ DK   
Sbjct: 384 IVGLSCKQPTTTEEIYDTIAHIDLATESSPSLSSSVQSPYPVICSHLDDIYKMILDKLAK 443

Query: 181 LDNIFLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTIS--RKNDRRNAK-KMSKKASR 240
           LD++   +L+ C+G+NG+CP+S+FNY+LLV +  K+ + S  ++N  +N K + ++KASR
Sbjct: 444 LDDLLPVVLKKCLGTNGTCPISVFNYSLLVNFKTKLSSHSAPKQNGHKNFKQQFTRKASR 503

Query: 241 ELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEP 300
           ELFV+KFSCK+PVYHNCRIYANDGRLLCYCD+RKLEWYL R LA+LV+++PPAI +LFEP
Sbjct: 504 ELFVKKFSCKAPVYHNCRIYANDGRLLCYCDKRKLEWYLNRGLAKLVEENPPAIMLLFEP 563

Query: 301 KGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCV 360
           KGRPEDEGNDFYIQ+K+NICVGCGEG HYLRYRIIPSCYR+HFPEHLKSHRSHDIVLLCV
Sbjct: 564 KGRPEDEGNDFYIQTKRNICVGCGEGKHYLRYRIIPSCYRVHFPEHLKSHRSHDIVLLCV 623

Query: 361 DCHEVAHAAAEKHKRNLAAEFGIPLFVRRVVDTKEA---FDLVESSDSATNFQEEGVSPL 420
           DCHEVAHAAAE++K+ +A EFGIPLFVRRV+D+KEA     LVE  +S  + ++ GVSPL
Sbjct: 624 DCHEVAHAAAERYKKQIATEFGIPLFVRRVLDSKEAQGTSSLVE-DESTGDSEDAGVSPL 683

Query: 421 ELRTAAMALLRHGPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQK 480
            LR+AAMALLRHG RMP  R+EEL+  V  YYG R++SEEDLEKALL+G+SPHERR+L++
Sbjct: 684 HLRSAAMALLRHGNRMPSSRREELLQTVKMYYGGRDLSEEDLEKALLIGLSPHERRKLER 743

Query: 481 KKGIALKHSGQHIFPDAEHQNGACSIDSSTVTNSSIDADADVNNHMNSDNGTVPE----- 540
           KKG++ KHS +              +D     N+  +A AD    M  +  TV +     
Sbjct: 744 KKGVSFKHSAE-----------VAGMDKQEDENNDGEALADFEKIMTVERSTVVDDSGDG 803

Query: 541 TCLPCGEVKVSD---NGSTITAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQ 600
           T    G  +++D   NG+T+  Q   NSKLSLLGHGPHGKQ+V++LL E+GEDG+R FCQ
Sbjct: 804 TSEGDGAKELNDTQCNGNTLHQQ---NSKLSLLGHGPHGKQIVEYLLREHGEDGVRDFCQ 863

Query: 601 RWRQVFVAAIQPRFLPAGWDVNHSGRRDFGEFSVYNSIKKLS 623
           RWR+VFV A+ PR LP GW+V+HSGRRDFGEFSVYN  K+LS
Sbjct: 864 RWRKVFVDAVHPRHLPGGWNVSHSGRRDFGEFSVYNPTKRLS 890

[Close]

BLAST of Carg27537 vs. Swiss-Prot
Match: sp|Q9NVH0|EXD2_HUMAN (Exonuclease 3'-5' domain-containing protein 2 OS=Homo sapiens OX=9606 GN=EXD2 PE=1 SV=2)

HSP 1 Score: 166.0 bits (419), Expect = 1.3e-39
Identity = 109/377 (28.91%), Postives = 171/377 (45.36%), Query Frame = 0


Query: 241 KSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPEDEGN 300
           KSP+Y NC ++A DG+ LC CDRRK +WYL + + ELV ++P  +K+ FEP GRPE  G 
Sbjct: 351 KSPLYDNCFLHAPDGQPLCTCDRRKAQWYLDKGIGELVSEEPFVVKLRFEPAGRPESPG- 410

Query: 301 DFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEVAHAA 360
           D+Y+  K+N+CV CG+ + Y+R  +IP  YR HFP  +K H SHD++LLC  CH +++  
Sbjct: 411 DYYLMVKENLCVVCGKRDSYIRKNVIPHEYRKHFPIEMKDHNSHDVLLLCTSCHAISNYY 470

Query: 361 AEKHKRNLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMALLRH 420
               K+ LA EF  P      + ++E   L+E  +             ++R+ A ALL +
Sbjct: 471 DNHLKQQLAKEFQAP------IGSEEGLRLLEDPERR-----------QVRSGARALL-N 530

Query: 421 GPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKHSGQH 480
              +P +R+EEL+  +  +Y    ++EE L++A                           
Sbjct: 531 AESLPTQRKEELLQALREFYNTDVVTEEMLQEA--------------------------- 590

Query: 481 IFPDAEHQNGACSIDSSTVTNSSIDADADVNNHMNSDNGTVPETCLPCGEVKVSDNGSTI 540
                                      A +   ++++N                      
Sbjct: 591 ---------------------------ASLETRISNEN---------------------- 614

Query: 541 TAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQ---RWRQVFVAAIQPRFLPA 600
                         + PHG +VV      + + G+R   Q   RWRQ F+ ++QP+ LP 
Sbjct: 651 --------------YVPHGLKVVQC----HSQGGLRSLMQLESRWRQHFLDSMQPKHLPQ 614

Query: 601 GWDVNHSGR---RDFGE 612
            W V+H+ +   R FGE
Sbjct: 711 QWSVDHNHQKLLRKFGE 614

[Close]

BLAST of Carg27537 vs. Swiss-Prot
Match: sp|Q8VEG4|EXD2_MOUSE (Exonuclease 3'-5' domain-containing protein 2 OS=Mus musculus OX=10090 GN=Exd2 PE=1 SV=2)

HSP 1 Score: 161.8 bits (408), Expect = 2.5e-38
Identity = 91/237 (38.40%), Postives = 135/237 (56.96%), Query Frame = 0


Query: 217 NDRRNAKKMSKKASRELFVQKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAE 276
           N  R+ +K  +K    L V   + KSP+Y NC + A DG+ LC CDRRK +WYL + + E
Sbjct: 359 NQGRDPRKHKRK---PLGVGYSARKSPLYDNCFLQAPDGQPLCTCDRRKAQWYLDKGIGE 418

Query: 277 LVDDDPPAIKILFEPKGRPEDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPE 336
           LV  +P  +++ FEP GRPE  G D+Y+  K+N+CV CG+ + Y+R  IIP  YR HFP 
Sbjct: 419 LVSKEPFVVRLQFEPAGRPESPG-DYYLMVKENLCVVCGKTDTYIRKNIIPHEYRKHFPI 478

Query: 337 HLKSHRSHDIVLLCVDCHEVAHAAAEKHKRNLAAEFGIPLFVRRVVDTKEAFDLVESSDS 396
            +K H SHD++LLC  CH +++      K+ LA EF  P      + ++E   L+E  + 
Sbjct: 479 EMKDHNSHDVLLLCTSCHAISNYYDNHLKQQLAKEFQAP------IGSEEGLRLLEDLER 538

Query: 397 ATNFQEEGVSPLELRTAAMALLRHGPRMPPKRQEELMHVVMRYYGRREISEEDLEKA 454
                       ++R+ A ALL +   +P  R+EEL+H +  +Y    I+EE L +A
Sbjct: 539 R-----------QVRSGARALL-NAESLPAHRKEELLHALREFYNTDIITEEMLHEA 573

[Close]

BLAST of Carg27537 vs. Swiss-Prot
Match: sp|A9LLI7|RP6L2_ARATH (Protein RRP6-like 2 OS=Arabidopsis thaliana OX=3702 GN=RRP6L2 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 3.4e-11
Identity = 50/135 (37.04%), Postives = 71/135 (52.59%), Query Frame = 0


Query: 1   MVRYARTDAHYLLHIANCLLFELKQV-NENSSTDGKFNFLLEASRRSNMICLQLYTKE-- 60
           M RYAR D HYLL+I + +  EL+++  +++ TD     LLE  +RS  +C QLY KE  
Sbjct: 406 MTRYAREDTHYLLYIYDLIKLELQRMAKDDAHTDSP---LLEVYKRSYDVCTQLYEKELL 465

Query: 61  TEGSPGESAASSICYRHL-NSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQA 120
           TE S          Y H+   Q   F       V  LC WRD +AR  DES  YVL ++ 
Sbjct: 466 TENS----------YLHVYGLQAAGFNAAQLAIVAGLCEWRDFIARAEDESTGYVLPNKV 525

Query: 121 IVALATQMSKNTREL 132
           ++ +A +M  +  +L
Sbjct: 526 LLEIAKEMPDSVGKL 527

[Close]

BLAST of Carg27537 vs. Swiss-Prot
Match: sp|Q0WVE8|RP6L1_ARATH (Protein RRP6-like 1 OS=Arabidopsis thaliana OX=3702 GN=RRP6L1 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 7.1e-09
Identity = 44/125 (35.20%), Postives = 62/125 (49.60%), Query Frame = 0


Query: 1   MVRYARTDAHYLLHIANCLLFEL-KQVNENSSTDGKFNFLLEASRRSNMICLQLYTKETE 60
           M RYAR D HYLL+I + +  EL     E+  +D     L+E  +RS  +C+QLY KE  
Sbjct: 261 MKRYAREDTHYLLYIYDVMRMELHTMAKEDEQSDSP---LVEVYKRSYDVCMQLYEKELW 320

Query: 61  GSPGESAASSICYRHLNSQLNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQAIVA 120
                     +   +LN+   S        V  LC WRD +AR  DES  YVL ++ +  
Sbjct: 321 TRDSYLHVYGVQTGNLNAVQLSI-------VAGLCEWRDRIARADDESTGYVLPNKTLFD 375

Query: 121 LATQM 125
           +A +M
Sbjct: 381 IAKEM 375

[Close]

BLAST of Carg27537 vs. TrEMBL
Match: tr|A0A0A0K254|A0A0A0K254_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043600 PE=4 SV=1)

HSP 1 Score: 1091.3 bits (2821), Expect = 0.0e+00
Identity = 545/631 (86.37%), Postives = 572/631 (90.65%), Query Frame = 0


Query: 1   MVRYARTDAHYLLHIANCLLFELKQVNENSSTDGKFNFLLEASRRSNMICLQLYTKETEG 60
           MV+YARTDAHYLL+IANCLL ELKQVNENSSTD KFNFLLEASRRSNM CLQLY+KETEG
Sbjct: 255 MVQYARTDAHYLLYIANCLLVELKQVNENSSTDDKFNFLLEASRRSNMTCLQLYSKETEG 314

Query: 61  SPGESAASSICYRHLNSQ----LNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQA 120
           SPGESAASSI  RHLNSQ    L S KTQFQD VRRLCAWRDLMARVHDESLRYVLSDQA
Sbjct: 315 SPGESAASSIWSRHLNSQGGSALISCKTQFQDRVRRLCAWRDLMARVHDESLRYVLSDQA 374

Query: 121 IVALATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLD 180
           IVA+A Q+ KNT ELYATIAQ DLNVDLS SL LP PS VVCSHLDD+HCLL D  GDLD
Sbjct: 375 IVAIAIQVPKNTGELYATIAQVDLNVDLSSSLFLPSPSSVVCSHLDDIHCLLHDNFGDLD 434

Query: 181 NIFLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISRKNDRRNAKKMSKKASRELFVQ 240
           NIFL ILQNCIGSNGSCPLSIFNYALLVKYNLKMMTIS+ NDR+NAK++SKKASRELFVQ
Sbjct: 435 NIFLVILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKNAKQISKKASRELFVQ 494

Query: 241 KFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPE 300
           KFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELV DDPPAIK+LFEPKGRPE
Sbjct: 495 KFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADDPPAIKLLFEPKGRPE 554

Query: 301 DEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEV 360
           DEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYR+HFPEHLKSHRSHDIVLLCVDCHE 
Sbjct: 555 DEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRVHFPEHLKSHRSHDIVLLCVDCHET 614

Query: 361 AHAAAEKHKRNLAAEFGIPLFVRRVVDTKEAFDL-VESSDSATNFQEEGVSPLELRTAAM 420
           AHAAAEK+KR LAAEFGIPLFVRRVVDTKEAFD+  E SDS TN QEEGVSPLELRTAAM
Sbjct: 615 AHAAAEKYKRELAAEFGIPLFVRRVVDTKEAFDMAAEPSDSETNVQEEGVSPLELRTAAM 674

Query: 421 ALLRHGPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALK 480
           ALLRHGPRMP KRQEELM VVM+YYGRREISEEDLE+ALLVGMSPHERRRLQKKKG+A K
Sbjct: 675 ALLRHGPRMPLKRQEELMFVVMKYYGRREISEEDLERALLVGMSPHERRRLQKKKGLAFK 734

Query: 481 HSGQHIFPDAEHQNGACSIDSSTVTNSSIDADADVNNHMNSDNGTVPETCLPCGEVKVSD 540
           HS Q +FPDAE QNGAC+ID+STV +SS+    DVNNHMNSD+G+V ETC+P GEV  SD
Sbjct: 735 HSPQSVFPDAERQNGACNIDTSTVDSSSV----DVNNHMNSDSGSVSETCVPGGEVSFSD 794

Query: 541 NGSTITAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFL 600
           NG   TAQPKFNSKLSLLGHGPHGK VVD+LL EYGEDGIRQFCQRWRQVFVAAIQPRFL
Sbjct: 795 NGYAKTAQPKFNSKLSLLGHGPHGKLVVDYLLKEYGEDGIRQFCQRWRQVFVAAIQPRFL 854

Query: 601 PAGWDVNHSGRRDFGEFSVYNSIKKLSPTIE 627
           PAGWDVNHSGRRDFGEFS+YN  KK  P  E
Sbjct: 855 PAGWDVNHSGRRDFGEFSLYNPKKKAFPDNE 881

[Close]

BLAST of Carg27537 vs. TrEMBL
Match: tr|A0A1S3C120|A0A1S3C120_CUCME (protein RRP6-like 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495596 PE=4 SV=1)

HSP 1 Score: 1090.1 bits (2818), Expect = 0.0e+00
Identity = 544/631 (86.21%), Postives = 571/631 (90.49%), Query Frame = 0


Query: 1   MVRYARTDAHYLLHIANCLLFELKQVNENSSTDGKFNFLLEASRRSNMICLQLYTKETEG 60
           MV+YARTDAHYLL+IANCLLFELKQVNENSSTD KFNFLLEASRRSNM CLQLY+KETEG
Sbjct: 255 MVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFLLEASRRSNMTCLQLYSKETEG 314

Query: 61  SPGESAASSICYRHLNSQ----LNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQA 120
           SPGESAASSI  RHLNSQ    L S KTQFQD VRRLCAWRDLMARVHDESLRYVLSDQA
Sbjct: 315 SPGESAASSISSRHLNSQGGSALISCKTQFQDRVRRLCAWRDLMARVHDESLRYVLSDQA 374

Query: 121 IVALATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLD 180
           I+A+A Q+ K+T ELYATIAQADLNVDLS S  LP PS VVCSHLDD+HCLL D  GDLD
Sbjct: 375 ILAIAIQVPKSTGELYATIAQADLNVDLSSSPFLPSPSSVVCSHLDDIHCLLHDNFGDLD 434

Query: 181 NIFLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISRKNDRRNAKKMSKKASRELFVQ 240
             FLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTIS+ NDR+NAK++SKKASRELFVQ
Sbjct: 435 RFFLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKNAKQISKKASRELFVQ 494

Query: 241 KFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPE 300
           KFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELV DDPPAIK+LFEPKGRPE
Sbjct: 495 KFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADDPPAIKLLFEPKGRPE 554

Query: 301 DEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEV 360
           DEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHE 
Sbjct: 555 DEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHET 614

Query: 361 AHAAAEKHKRNLAAEFGIPLFVRRVVDTKEAFDL-VESSDSATNFQEEGVSPLELRTAAM 420
           AHAAAEKHKR LAAEFGIPLFVRRVVDTKEAFD+  E SDS TN  EEGVSPLELRTAAM
Sbjct: 615 AHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFDMAAEPSDSETNVHEEGVSPLELRTAAM 674

Query: 421 ALLRHGPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALK 480
           ALLRHGPRMP KRQEELM VVM+YYGRREISEEDLE+ALLVGMSPHERRR+QKKKG+A K
Sbjct: 675 ALLRHGPRMPLKRQEELMLVVMKYYGRREISEEDLERALLVGMSPHERRRVQKKKGLAFK 734

Query: 481 HSGQHIFPDAEHQNGACSIDSSTVTNSSIDADADVNNHMNSDNGTVPETCLPCGEVKVSD 540
           HS Q +FPDAEHQNGAC+ID+STV NSS+    DVNNHMNSD+G+V +TC P GEV  SD
Sbjct: 735 HSPQSVFPDAEHQNGACNIDTSTVDNSSV----DVNNHMNSDSGSVSDTCGPGGEVSFSD 794

Query: 541 NGSTITAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFL 600
           NG   TAQPKFNSKLSLLGHGPHGK VVD+LL EY EDGIRQFCQRWRQVFVAAIQPRFL
Sbjct: 795 NGYAKTAQPKFNSKLSLLGHGPHGKLVVDYLLKEYHEDGIRQFCQRWRQVFVAAIQPRFL 854

Query: 601 PAGWDVNHSGRRDFGEFSVYNSIKKLSPTIE 627
           PAGWDVNHSGRRDFGEFS+YN  KK SP  E
Sbjct: 855 PAGWDVNHSGRRDFGEFSLYNPKKKASPANE 881

[Close]

BLAST of Carg27537 vs. TrEMBL
Match: tr|A0A1S4E0K2|A0A1S4E0K2_CUCME (protein RRP6-like 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495596 PE=4 SV=1)

HSP 1 Score: 1012.3 bits (2616), Expect = 4.7e-292
Identity = 514/631 (81.46%), Postives = 540/631 (85.58%), Query Frame = 0


Query: 1   MVRYARTDAHYLLHIANCLLFELKQVNENSSTDGKFNFLLEASRRSNMICLQLYTKETEG 60
           MV+YARTDAHYLL+IANCLLFELKQVNENSSTD KFNFLLEASRRSNM CLQLY+KETEG
Sbjct: 255 MVQYARTDAHYLLYIANCLLFELKQVNENSSTDDKFNFLLEASRRSNMTCLQLYSKETEG 314

Query: 61  SPGESAASSICYRHLNSQ----LNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQA 120
           SPGESAASSI  RHLNSQ    L S KTQFQD VRRLCAWRDLMARVHDESLRYVLSDQA
Sbjct: 315 SPGESAASSISSRHLNSQGGSALISCKTQFQDRVRRLCAWRDLMARVHDESLRYVLSDQA 374

Query: 121 IVALATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLD 180
           I+A+A Q+ K+T ELYATIAQADLNVDLS S  LP PS VVCSHLDD+HCLL D  GDLD
Sbjct: 375 ILAIAIQVPKSTGELYATIAQADLNVDLSSSPFLPSPSSVVCSHLDDIHCLLHDNFGDLD 434

Query: 181 NIFLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISRKNDRRNAKKMSKKASRELFVQ 240
             FLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTIS+ NDR+NAK++SKKASRELFVQ
Sbjct: 435 RFFLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISKHNDRKNAKQISKKASRELFVQ 494

Query: 241 KFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPE 300
           KFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELV DDPPAIK+LFEPKGRPE
Sbjct: 495 KFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVADDPPAIKLLFEPKGRPE 554

Query: 301 DEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEV 360
           DEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHE 
Sbjct: 555 DEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHET 614

Query: 361 AHAAAEKHKRNLAAEFGIPLFVRRVVDTKEAFDL-VESSDSATNFQEEGVSPLELRTAAM 420
           AHAAAEKHKR LAAEFGIPLFVRRVVDTKEAFD+  E SDS TN  EEGVSPLELRTAAM
Sbjct: 615 AHAAAEKHKRELAAEFGIPLFVRRVVDTKEAFDMAAEPSDSETNVHEEGVSPLELRTAAM 674

Query: 421 ALLRHGPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALK 480
           ALLRHGPRMP KRQEELM VVM+YYGRREISEEDLE+ALLVGMSPHERRR+QKKKG+A K
Sbjct: 675 ALLRHGPRMPLKRQEELMLVVMKYYGRREISEEDLERALLVGMSPHERRRVQKKKGLAFK 734

Query: 481 HSGQHIFPDAEHQNGACSIDSSTVTNSSIDADADVNNHMNSDNGTVPETCLPCGEVKVSD 540
           HS Q +FPDAEHQNGAC+ID+STV NSS+    DVNNHMNSD+G+V +TC P GE     
Sbjct: 735 HSPQSVFPDAEHQNGACNIDTSTVDNSSV----DVNNHMNSDSGSVSDTCGPGGE----- 794

Query: 541 NGSTITAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRFL 600
                                            EY EDGIRQFCQRWRQVFVAAIQPRFL
Sbjct: 795 ---------------------------------EYHEDGIRQFCQRWRQVFVAAIQPRFL 843

Query: 601 PAGWDVNHSGRRDFGEFSVYNSIKKLSPTIE 627
           PAGWDVNHSGRRDFGEFS+YN  KK SP  E
Sbjct: 855 PAGWDVNHSGRRDFGEFSLYNPKKKASPANE 843

[Close]

BLAST of Carg27537 vs. TrEMBL
Match: tr|A0A2P4KV14|A0A2P4KV14_QUESU (Isoform 2 of protein rrp6-like 3 OS=Quercus suber OX=58331 GN=CFP56_49610 PE=4 SV=1)

HSP 1 Score: 852.8 bits (2202), Expect = 4.8e-244
Identity = 431/637 (67.66%), Postives = 509/637 (79.91%), Query Frame = 0


Query: 1   MVRYARTDAHYLLHIANCLLFELK-QVNENSSTDGKFNFLLEASRRSNMICLQLYTKETE 60
           MV+YAR DAHYLL+IANCL+ ELK Q NE S  D KF+F+LEASRRSNM CLQLYTK+ E
Sbjct: 266 MVQYARIDAHYLLYIANCLIAELKQQENEISCPDDKFHFVLEASRRSNMTCLQLYTKDVE 325

Query: 61  GSPGESAASSICYRHLNSQ---LNSFKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQA 120
           G PGESAASS+  RHLN Q    ++F+T+F D VRRLCAWRDLMAR+HDESLRYVLSDQA
Sbjct: 326 GFPGESAASSLSSRHLNGQGGVSSNFETKFPDLVRRLCAWRDLMARLHDESLRYVLSDQA 385

Query: 121 IVALATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDLD 180
           IVALA +    T E+  TI QADLNVDLS    LP PSPVVCSHLDD+  LL DK G+L+
Sbjct: 386 IVALAGRAPMTTTEVCNTINQADLNVDLSFHSFLPSPSPVVCSHLDDVCSLLHDKIGNLN 445

Query: 181 NIFLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISRKNDRRNAKKMSKKASRELFVQ 240
           +IF  I+Q C+G +GSCP+SI NYALL+  NLK+  +S++N  +++K+++KKASR+LFVQ
Sbjct: 446 DIFPVIIQKCLGPSGSCPISIHNYALLINCNLKLEFVSKQNGVKSSKQVAKKASRDLFVQ 505

Query: 241 KFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRPE 300
           KFSCKSPVYHNCRIYANDGRLLCYCD+RKLEWYL R+LA++VDD+PPAI +LFEPKGRPE
Sbjct: 506 KFSCKSPVYHNCRIYANDGRLLCYCDQRKLEWYLHRDLAKIVDDNPPAIMLLFEPKGRPE 565

Query: 301 DEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHEV 360
           DE NDFYIQSKKNICVGCGEG+HYLRYRIIPSCYR+HFPEH+KSHRSHDIVL+CVDCHEV
Sbjct: 566 DEDNDFYIQSKKNICVGCGEGSHYLRYRIIPSCYRMHFPEHMKSHRSHDIVLVCVDCHEV 625

Query: 361 AHAAAEKHKRNLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAMA 420
           AHA+AEK+K+ +AAEFGIPLFVR+VVD K+A  +  SS+S TN +E GVSPL+LRTAAMA
Sbjct: 626 AHASAEKYKKQIAAEFGIPLFVRKVVDLKQAQVMSGSSESETNLEEGGVSPLQLRTAAMA 685

Query: 421 LLRHGPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALKH 480
           LLRHGPRMP KR++EL  +VM YYG REISE DLEKALLVGMSPHERRRL+KKKG++ K 
Sbjct: 686 LLRHGPRMPSKRRDELTQIVMSYYGGREISEVDLEKALLVGMSPHERRRLEKKKGLSFKP 745

Query: 481 SGQHIFPDAEHQNGACSIDSSTVTNSSIDADADVNNHMNSDNGTVPETCLPCGEVKVSDN 540
           S   I P+ E +N     + ST T+  ++          +  G + ++ L    +  S+ 
Sbjct: 746 SAVSILPNEEQENN----NGSTETSGFVE----------TSQGLMKKSVLLLKRINPSNR 805

Query: 541 GSTI-------TAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAA 600
              +       TAQPK + KLSLLGHGPHGKQVVDHLL EYGEDGIRQF QRWRQVFV A
Sbjct: 806 IVDLYHTEYDGTAQPKHHPKLSLLGHGPHGKQVVDHLLKEYGEDGIRQFSQRWRQVFVEA 865

Query: 601 IQPRFLPAGWDVNHSGRRDFGEFSVYNSIKKLSPTIE 627
           + PRFLPAGWDV HSGRRDFGE+SVYN  KK S  ++
Sbjct: 866 VHPRFLPAGWDVMHSGRRDFGEYSVYNPAKKTSAPVQ 888

[Close]

BLAST of Carg27537 vs. TrEMBL
Match: tr|A0A2I4GX19|A0A2I4GX19_9ROSI (protein RRP6-like 3 isoform X4 OS=Juglans regia OX=51240 GN=LOC109011617 PE=4 SV=1)

HSP 1 Score: 840.1 bits (2169), Expect = 3.2e-240
Identity = 448/686 (65.31%), Postives = 512/686 (74.64%), Query Frame = 0


Query: 1   MVRYARTDAHYLLHIANCLLFELKQV-NENSSTDGKFNFLLEASRRSNMICLQLYTKETE 60
           MV+YAR DAHYLL+IANCL+ ELKQ   E S  D KFNF+LEASRRSNM CLQLY KE E
Sbjct: 179 MVQYARIDAHYLLYIANCLITELKQQGTEISCPDDKFNFVLEASRRSNMTCLQLYAKEVE 238

Query: 61  GSPGESAASSICYRHLNSQ--LNS--FKTQFQDHVRRLCAWRDLMARVHDESLRYVLSDQ 120
             PGESAASS+  RHLN Q  ++S  FKT+FQD V RLCAWRD+MARVHDESLRYVLSDQ
Sbjct: 239 AFPGESAASSLTSRHLNGQGAVSSVYFKTEFQDLVMRLCAWRDIMARVHDESLRYVLSDQ 298

Query: 121 AIVALATQMSKNTRELYATIAQADLNVDLSPSLLLPGPSPVVCSHLDDLHCLLRDKSGDL 180
           AIVALA +      E+  TI QADLNVDLS + LL  PS VVCSHLDD+H LL+D   +L
Sbjct: 299 AIVALADRPPMTLAEICRTITQADLNVDLSFNSLLSSPSSVVCSHLDDVHTLLQDNISNL 358

Query: 181 DNIFLGILQNCIGSNGSCPLSIFNYALLVKYNLKMMTISRKNDRRNAKKMSKKASRELFV 240
           ++IF  ILQ C+GS+GSCPLSI NYALLV  NLK+  +S++N  +++K++++K SRELFV
Sbjct: 359 NDIFPVILQKCLGSSGSCPLSIINYALLVNCNLKVSLVSKQNMVKSSKQVARKTSRELFV 418

Query: 241 QKFSCKSPVYHNCRIYANDGRLLCYCDRRKLEWYLRRELAELVDDDPPAIKILFEPKGRP 300
           QKFSCK+PVYHNC+I+ANDGRLLCYCDRRKLEWYL RELA+LVDD+PPAI +LFEPKGRP
Sbjct: 419 QKFSCKTPVYHNCKIFANDGRLLCYCDRRKLEWYLHRELAKLVDDNPPAIMLLFEPKGRP 478

Query: 301 EDEGNDFYIQSKKNICVGCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHE 360
           EDE NDFYIQSKKNICV CGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHE
Sbjct: 479 EDEDNDFYIQSKKNICVCCGEGNHYLRYRIIPSCYRIHFPEHLKSHRSHDIVLLCVDCHE 538

Query: 361 VAHAAAEKHKRNLAAEFGIPLFVRRVVDTKEAFDLVESSDSATNFQEEGVSPLELRTAAM 420
           VAHAAAEK+K+ +AAEFGIPLFV +VVD+KE   +  SS+SATN +E GV PL+LRTAAM
Sbjct: 539 VAHAAAEKYKKQIAAEFGIPLFVSKVVDSKEVQVISGSSESATNDEEVGVPPLQLRTAAM 598

Query: 421 ALLRHGPRMPPKRQEELMHVVMRYYGRREISEEDLEKALLVGMSPHERRRLQKKKGIALK 480
           ALLRHGPRMP KR+EELM +VMRYYG REI+  DLE ALLVGMSPHERRRL+KKKGI+ K
Sbjct: 599 ALLRHGPRMPSKRREELMQIVMRYYGGREITGADLEAALLVGMSPHERRRLKKKKGISFK 658

Query: 481 HSGQHIFPDAEHQNGACSIDSSTVTNSSIDADADVNNHMNSDNGTVPETCLPCGEVKVSD 540
           HS   I P+ ++ NG      ST T+S +DA  +V   +NS + T  E C    E + +D
Sbjct: 659 HSAGSILPNMQN-NGV-----STETSSIVDA-LEV-GILNSSDSTKAEACNEQQEFRKAD 718

Query: 541 N---GSTI---------------------------------------------------- 600
           +    STI                                                    
Sbjct: 719 DDVGDSTIGADSGVDEVNYTFKDSVKSDTHGASDRKGDCIGNSDDNYESRGPSNRTVELN 778

Query: 601 ------TAQPKFNSKLSLLGHGPHGKQVVDHLLAEYGEDGIRQFCQRWRQVFVAAIQPRF 621
                 TAQ K NSKLSLLGHGPHGKQVV+HLL EYGEDG+RQFCQRWRQVFV A+QPRF
Sbjct: 779 HKKYDGTAQSKHNSKLSLLGHGPHGKQVVNHLLKEYGEDGVRQFCQRWRQVFVEALQPRF 838

The following BLAST results are available for this feature:

BLAST of Carg27537 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930824.1	0.0e+00	99.20	protein RRP6-like 3 isoform X2 [Cucurbita moschata]	[more]
XP_022930823.1	0.0e+00	98.25	protein RRP6-like 3 isoform X1 [Cucurbita moschata]	[more]
XP_023531760.1	0.0e+00	98.08	protein RRP6-like 3 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023531755.1	0.0e+00	97.93	protein RRP6-like 3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023531756.1 prot...	[more]
XP_022988685.1	0.0e+00	97.77	protein RRP6-like 3 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg27537 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G32415.1	5.0e-223	61.15	Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain	[more]
AT5G35910.1	1.9e-12	37.04	Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain	[more]
AT1G54440.2	4.0e-10	35.20	Polynucleotidyl transferase, ribonuclease H fold protein with HRDC domain	[more]

BLAST of Carg27537 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|A9LLI8\|RP6L3_ARATH	1.2e-221	61.06	Protein RRP6-like 3 OS=Arabidopsis thaliana OX=3702 GN=RRP6L3 PE=2 SV=1	[more]
sp\|Q9NVH0\|EXD2_HUMAN	1.3e-39	28.91	Exonuclease 3'-5' domain-containing protein 2 OS=Homo sapiens OX=9606 GN=EXD2 PE...	[more]
sp\|Q8VEG4\|EXD2_MOUSE	2.5e-38	38.40	Exonuclease 3'-5' domain-containing protein 2 OS=Mus musculus OX=10090 GN=Exd2 P...	[more]
sp\|A9LLI7\|RP6L2_ARATH	3.4e-11	37.04	Protein RRP6-like 2 OS=Arabidopsis thaliana OX=3702 GN=RRP6L2 PE=2 SV=1	[more]
sp\|Q0WVE8\|RP6L1_ARATH	7.1e-09	35.20	Protein RRP6-like 1 OS=Arabidopsis thaliana OX=3702 GN=RRP6L1 PE=2 SV=1	[more]

BLAST of Carg27537 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K254\|A0A0A0K254_CUCSA	0.0e+00	86.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G043600 PE=4 SV=1	[more]
tr\|A0A1S3C120\|A0A1S3C120_CUCME	0.0e+00	86.21	protein RRP6-like 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495596 PE=4 SV=1	[more]
tr\|A0A1S4E0K2\|A0A1S4E0K2_CUCME	4.7e-292	81.46	protein RRP6-like 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495596 PE=4 SV=1	[more]
tr\|A0A2P4KV14\|A0A2P4KV14_QUESU	4.8e-244	67.66	Isoform 2 of protein rrp6-like 3 OS=Quercus suber OX=58331 GN=CFP56_49610 PE=4 S...	[more]
tr\|A0A2I4GX19\|A0A2I4GX19_9ROSI	3.2e-240	65.31	protein RRP6-like 3 isoform X4 OS=Juglans regia OX=51240 GN=LOC109011617 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity
GO:0000166	nucleotide binding
GO:0003676	nucleic acid binding

Vocabulary: **Biological Process**
Term	Definition
GO:0044237	cellular metabolic process

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **INTERPRO**
Term	Definition
IPR010997	HRDC-like_sf
IPR002121	HRDC_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044237	cellular metabolic process
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27537-RA	Carg27537-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002121	HRDC domain	PFAM	PF00570	HRDC	coord: 90..131 e-value: 1.7E-7 score: 31.0
None	No IPR available	GENE3D	G3DSA:1.10.150.80		coord: 71..178 e-value: 1.2E-19 score: 72.0
None	No IPR available	GENE3D	G3DSA:3.30.420.500		coord: 1..60 e-value: 5.3E-9 score: 37.6
None	No IPR available	PANTHER	PTHR12124:SF41	PROTEIN RRP6-LIKE 3	coord: 518..593
None	No IPR available	PANTHER	PTHR12124	POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED	coord: 1..506
None	No IPR available	PANTHER	PTHR12124:SF41	PROTEIN RRP6-LIKE 3	coord: 1..506
None	No IPR available	PANTHER	PTHR12124	POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED	coord: 518..593
IPR010997	HRDC-like superfamily	SUPERFAMILY	SSF47819	HRDC-like	coord: 79..137

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27537	CmaCh11G018240	Cucurbita maxima (Rimu)	carcmaB1313
Carg27537	CmoCh11G018970	Cucurbita moschata (Rifu)	carcmoB1282
Carg27537	Lsi11G014510	Bottle gourd (USVL1VR-Ls)	carlsiB873
Carg27537	Bhi05G001177	Wax gourd	carwgoB1111

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None