Carg27420 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27420
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ap-3 complex subunit mu
Location	Cucurbita_argyrosperma_scaffold_413 : 147942 .. 152919 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCAATGTACAGCGGGAGTGAAGAACCCCTTTCCTATGCTCATATCAATCGATCTTCGTCATTCGTCTCTCTGCGAACTCCGCGCTTAAGCCTCATTTCTGGCCTTCAGACGCCGATTTAAGAGATGTTGCAATGCATATTTCTGCTATCCGATTCAGGGTAAGAGTTAATCTCATTACCTATAAACAGTGATTCATCATCCGATATTCGGTCAGTTTTTTTCCCTGAATTGTTCGTTCCAATTCAAATGTTGCTCCTCTTTTACTGTTGGATTTTGCAGAGAGATTATGCTGGAGAAACAGCTCACTGGCCATCGTGTCGACCGATCTATTTGTGCTTGGTTCTGGGAGCAATCCGTATCTCAAGGTGATTCCTTCAAGGTACCTTTAGAATCGCAAAATTTCCATTCAAGACTACTCTATTTGTGAATTGTAGGTTTTTCTTTTAGATTTTGGTATCTGGATCTTTGATTTGTAAGTATTTGTTCGGAGATAGGTTTTTCGTTTTATGATAATTCGATGTTGGATTGAATTTGATTCTTGTTTTTTTGTTTTTTTTTTTCCCATTTATTTTTAGCTGCAGCCGGTGATTGCTTCTCCGACACATTATCTTTTCCAAGTTGTTCGTGAGGGAATCACTTTCTTGGCCTGCACCCAAGTTGAAATGCCACCTTTAATGGGGATTGAGGTAAATTTCTTCTCTAGAATGAGCAAGAAATTAGGTCGGATATTTGAGTTCTTAACTTTTGATCCTTAGTTCCTCTGCAGAGTGGCGGATGTTCTCACAGATTATCTTGGGGAGTTGAATGAAGATTTGGTAAAGGATAACTTTGTCATTGTATATGAGGTACGCCCGAACCAATTCACGTATAAACATGGCGGATTTTAATTCATTCTTAGATTGTTAATTTCATTTGGTTCAACAAAAAAAGTCATTGTTAGACATTTGGAATTTGTAGCTTCTGGATGAGATGATAGACAATGGCTTCCCCCTCACTACAGAACCTAATATCCTGAGAGAAATCATAGCTCCACCGAACCTTGTCAGCAAAGTTTTGAGTGTCGTGACTGGTAACAGTTCGAATGTGAGCGACACCATTCCAGGTGCAATCGCATCTCATGTTCCATGGAGAACAACAGATCCAAAATATGCTAAAAATGAAGTTAATGTTGATCTTGTGGAGGAGATGGACGCAATTCTAAACAGGTTCTAAAAGCTTTTCTCTAGTTTTCATTTTTATAATAAATATCGTTACGTATTCCATTCACCAATTATACGTTTACCATTAAATTAGTATTCGGTTTGGCTGCTGAAATCCTACACATTCCACTAATGCATCTCAATTGAAGTTGTAATGAATAACAAGCACATGAGAATAGTAGACATGTTATATTGAATCTTGCTGTTGAACTGTCTTGTTCAGGGATGGCCACCTGGTCAAGTGTGAAATTTATGGTGAAATTCAAGTAAATTCTCATCTATCTGGTCTTCCTGATTTGACACTCTCATTTACAAACCCTTCAATTCTTGATGATGTGAGATTCCATCCCTGTGTTCGGTTTCGCCCATGGGAATCACATCAGATCCTATCATTTGTGCCTCCTGATGGGCAGTTTAAGCTCATGAGTTACAGGTATGTATAAATTGAACATGGATTCTGGAAAGTATCTACTTTTTCACCTTATTATATGTTAATTATTAGTATTTCTTCCTTACCAAATCTTAGTTTCATTCAGGGTTAGAAAGTTGAAGAATACTCCTGTATATGTAAAGCCTCAGTTTACATCAGATGCTGGGACGTGCCGGGTCAGTGTGTTAGTAGGAATTCGACATGATCCTGGAAAGCCGATTGACTCAATCGATGTGCAGTTTCAGTTGCCCTCGTGCGTTTTATCAGCTGACCTTACTTCAAATTATGGAACAGTGAACATCCTATCTAATAAGGTAATAGTTTCATCATTTTGTTCAACTGAAAAAAGGAGTTATATTCCATCCATGCTTGCTAATCGACCAAAAGAGTTATGCTAAATGCCTTTTTAGGTTGTTTTCAGTTTCATTGCAGTGACTTTTTAAATTGGTATTTGGCAATTTCTGACTGGTAAAATACCTGGTGTTTATATGATGAATATGTAAGTTTCTTTCTTGGGATCTCTTTCACGGTGTACTTTGTTCAAGGAGAGGATTGTTGAGCATTGTTGAGAGGGATCCCACGTTGGCTAATTAAGGAGATGGTCATGAGTTTATAAGTAAGGAATACTATTTCTATTGGTACGAGGCATTTTGGGGAAACCAAAAGCAAAGTCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGGTCCGAGATTCCTAATATGGTATCGAGCTATGCCCTTAACTTAGCTATGTCGATAGAATCCTCAAATGTCGAAGAAAGAAGTTGTGAGCCTCGAAGGTATAGCCAAAAGTGACTCAAATATCTAACAAAGGGTGTACTTTGTTTGAGAGTTCCAGAGAAGAAGTCGAGCCTCAATTATGGGGAGGTTGATCGAGGGCTCCATAGGCTTCAGGGGCGGCTCTATGGTGTACTTTGTTCAAGGGGAGGATTGTTGAGAGGGAGTCCCTGGTTGGCTAATTAAGGAGATGATCATGAGTTTATAAGTAAGGAATACTATTTCTGTTGGTATGAGGTCTTCTGGGGAAACCAATAGCAAAGTCACGAAAGCTAATGTTCAAAGTGGACAATATCATACCATTGTGGAGGTTTGTGATTCCTAACATGGTATCAGAGCTATGCCCTTAACTTAGCTATGTCAATAGAATCATCAAATGTCGAATAAAGAAGTTGTGAGCCTCGAAGGTATAGTCAAAAGTGACTCAAGTGTCGAGCAAATGGTGTACTTTGTTCGATGACTCCAAAAAAGGAGTCGAGCCTCAATTATGAGGAGGCTGTTTGAGGGCTTCATAAACCTGAGGGGAGGCTCTATGGTGTACTTTATTCGAGGGGATGATTGTTGAGGACTATTGGGAGGGAGTCCTACATTGGCTAATTAAGGAGATGATCATGAGTTTATAAGTAAGGAATTCTATTTCGGTTGGTAGGCCTTTTGGGGAAACCAAAAGTAAAGTGATGAGAGAGCTTATGCTCAAAGTGAACAATATCATACCATACCATTGTGGAGGTTCGTGATTCCTAATATGGTATTAGAGTTATGTCCTTAACTTAGTCATGTCAATAGAATTCTCAAATGTCGAACAAAGAAGTTGCGAGACTTGAAGGTATAGTCAAAAGTGACTCAAGTGTCGAACAAAGGGTGTACTTTGTTCGATGGCTCCAGAAAAGGAGTCGAGCCTCGATTAAGGGGAGACTCTATGGTATACTTTGTTCAAGGGGAGTATTGTTGAGAGAGAGTCCCACATTGACTAATTAAGGAGATCGATCTTGGATTTATAAGTAAGAAATACTATATGTATCGGTATGAGGTCTTTTGGGGAAACCAAATGCAAACCCATGAGAGCTTATGCTCAAAGTGGACAATATCATTGTGGAGGTTCGTGATTCCTAATATGGTATTAGAGTTATGTCCTTAACTTAGTCATCGAACAAAGAAGTTGTGAGCCTCGAAAGTATAGTCAAAAGTGACCCCAGTGTCGAACAAAGGGTGTACTTTGTTCGATGGCTCCAAAAAAGGAGTCGAGCCTCGATTAAGGGGAGGCTCTATGGTATACTTTGTTCGAGGGGAGGACTCTTGAGAGGGAATCTCACATTGACTAATTATGGAGATGATCATGGATTTATAAGCAAGTCGTGAGAGCTTATACTCAAAATGGACAATATTATTGTGGAGGTTCGTGATTCGTAACAATTTTCTGTAAGAGTAATTAGTGATGTACGTTCGTTTGTTTAAGGAAACTATATTCTATTCTTATTCTTATTCTTATTCTCTCATGATGTACTAAAAATTGAATACCGTTTTATTTCTACAGATGTGTTCTTGGACAATTGGAAAGATGCCAAAAGATAAGACCCCTTCAATGTCTGGAACATTAACACTCGAGACAGGATTACAACAGCTTCATATATTTCCAACATTTCAAGTACGTTTTAAGATCATGGGTGTAGTTCTCTCTGCCCTGCAAGTAGATAAACTCGACGTGAAGAACTTGCCGAATCACCCTTACAAAGGCTTTCGAGCTCTAACACGAGCTGGGAAGTTCGAAGTTCGGTCATAAGCTATAACGGTACCTACCCAATTGTGAAGTTGTGAGCACAATCTTTGGTTCAATGTTAAATTACTGTAAAATCCAGTAGTGATTTGATGATAGAAAGTACAATATTTGAGCTATTGTATCTGAAAACAAGCCTCCTCTTGTGTTTCATTTCATGCATTCACTTTGTTCACTCTGAAAGAATCCATAACTTGACGCAGCTCATTTTCTTCTTCTACAAACACATTTTCTGGGGTTTGTAATCTCAGTTCATATAGCCGATTGTTTTCGACTCCGAGAACGGAGAGATATCTTCGGTCCCATTCCAGACGAACCACTCGATCCTGCGGCATTACTGCCAGTTCATTGTTGTTTGCATATGACTTTATGTTTACCTGATATGCAATTGAGGGTATTATTTAATATTGATAATCATGAAACAAAAAAAAAATAGTAAACTAACTACTTTAGAGATGTTACATTATTTAATGTCAAAGAATGAACTATCAAATCTCAACTCTACTGCTGAGTGTAACCATTCAAGTCCATTTTTATTTTAGGGCTTTCAGTTCAAGTCCTCCGCTAGCAAATATTATTATTTTAGGGCTCTCTTTCACGCGTTTTTAAAATACGAATACTTTGTTTCTACCCGATGTGGGATCTCACAATCCACCTCCCATTTTAGGGCTTTCTCTTTCACGCGTTTTTAAAACGTGTCTGTAGGGAGGGGTTTTCATAACCTTATAAGGTATGCTTTGTTTCTAACCAATGTGGGATCTC

mRNA sequence

ATCAATGTACAGCGGGAGTGAAGAACCCCTTTCCTATGCTCATATCAATCGATCTTCGTCATTCGTCTCTCTGCGAACTCCGCGCTTAAGCCTCATTTCTGGCCTTCAGACGCCGATTTAAGAGATGTTGCAATGCATATTTCTGCTATCCGATTCAGGAGAGATTATGCTGGAGAAACAGCTCACTGGCCATCGTGTCGACCGATCTATTTGTGCTTGGTTCTGGGAGCAATCCGTATCTCAAGGTGATTCCTTCAAGCTGCAGCCGGTGATTGCTTCTCCGACACATTATCTTTTCCAAGTTGTTCGTGAGGGAATCACTTTCTTGGCCTGCACCCAAGTTGAAATGCCACCTTTAATGGGGATTGAGTTCCTCTGCAGAGTGGCGGATGTTCTCACAGATTATCTTGGGGAGTTGAATGAAGATTTGGTAAAGGATAACTTTGTCATTGTATATGAGCTTCTGGATGAGATGATAGACAATGGCTTCCCCCTCACTACAGAACCTAATATCCTGAGAGAAATCATAGCTCCACCGAACCTTGTCAGCAAAGTTTTGAGTGTCGTGACTGGTAACAGTTCGAATGTGAGCGACACCATTCCAGGTGCAATCGCATCTCATGTTCCATGGAGAACAACAGATCCAAAATATGCTAAAAATGAAGTTAATGTTGATCTTGTGGAGGAGATGGACGCAATTCTAAACAGGGATGGCCACCTGGTCAAGTGTGAAATTTATGGTGAAATTCAAGTAAATTCTCATCTATCTGGTCTTCCTGATTTGACACTCTCATTTACAAACCCTTCAATTCTTGATGATGTGAGATTCCATCCCTGTGTTCGGTTTCGCCCATGGGAATCACATCAGATCCTATCATTTGTGCCTCCTGATGGGCAGTTTAAGCTCATGAGTTACAGGGTTAGAAAGTTGAAGAATACTCCTGTATATGTAAAGCCTCAGTTTACATCAGATGCTGGGACGTGCCGGGTCAGTGTGTTAGTAGGAATTCGACATGATCCTGGAAAGCCGATTGACTCAATCGATGTGCAGTTTCAGTTGCCCTCGTGCGTTTTATCAGCTGACCTTACTTCAAATTATGGAACAGTGAACATCCTATCTAATAAGATGTGTTCTTGGACAATTGGAAAGATGCCAAAAGATAAGACCCCTTCAATGTCTGGAACATTAACACTCGAGACAGGATTACAACAGCTTCATATATTTCCAACATTTCAAGTACGTTTTAAGATCATGGGTGTAGTTCTCTCTGCCCTGCAAGTAGATAAACTCGACGTGAAGAACTTGCCGAATCACCCTTACAAAGGCTTTCGAGCTCTAACACGAGCTGGGAAGTTCGAAGTTCGGTCATAAGCTATAACGGTACCTACCCAATTGTGAAGTTGTGAGCACAATCTTTGGTTCAATGTTAAATTACTGTAAAATCCAGTAGTGATTTGATGATAGAAAGTACAATATTTGAGCTATTGTATCTGAAAACAAGCCTCCTCTTGTGTTTCATTTCATGCATTCACTTTGTTCACTCTGAAAGAATCCATAACTTGACGCAGCTCATTTTCTTCTTCTACAAACACATTTTCTGGGGTTTGTAATCTCAGTTCATATAGCCGATTGTTTTCGACTCCGAGAACGGAGAGATATCTTCGGTCCCATTCCAGACGAACCACTCGATCCTGCGGCATTACTGCCAGTTCATTGTTGTTTGCATATGACTTTATGTTTACCTGATATGCAATTGAGGGTATTATTTAATATTGATAATCATGAAACAAAAAAAAAATAGTAAACTAACTACTTTAGAGATGTTACATTATTTAATGTCAAAGAATGAACTATCAAATCTCAACTCTACTGCTGAGTGTAACCATTCAAGTCCATTTTTATTTTAGGGCTTTCAGTTCAAGTCCTCCGCTAGCAAATATTATTATTTTAGGGCTCTCTTTCACGCGTTTTTAAAATACGAATACTTTGTTTCTACCCGATGTGGGATCTCACAATCCACCTCCCATTTTAGGGCTTTCTCTTTCACGCGTTTTTAAAACGTGTCTGTAGGGAGGGGTTTTCATAACCTTATAAGGTATGCTTTGTTTCTAACCAATGTGGGATCTC

Coding sequence (CDS)

ATGTTGCAATGCATATTTCTGCTATCCGATTCAGGAGAGATTATGCTGGAGAAACAGCTCACTGGCCATCGTGTCGACCGATCTATTTGTGCTTGGTTCTGGGAGCAATCCGTATCTCAAGGTGATTCCTTCAAGCTGCAGCCGGTGATTGCTTCTCCGACACATTATCTTTTCCAAGTTGTTCGTGAGGGAATCACTTTCTTGGCCTGCACCCAAGTTGAAATGCCACCTTTAATGGGGATTGAGTTCCTCTGCAGAGTGGCGGATGTTCTCACAGATTATCTTGGGGAGTTGAATGAAGATTTGGTAAAGGATAACTTTGTCATTGTATATGAGCTTCTGGATGAGATGATAGACAATGGCTTCCCCCTCACTACAGAACCTAATATCCTGAGAGAAATCATAGCTCCACCGAACCTTGTCAGCAAAGTTTTGAGTGTCGTGACTGGTAACAGTTCGAATGTGAGCGACACCATTCCAGGTGCAATCGCATCTCATGTTCCATGGAGAACAACAGATCCAAAATATGCTAAAAATGAAGTTAATGTTGATCTTGTGGAGGAGATGGACGCAATTCTAAACAGGGATGGCCACCTGGTCAAGTGTGAAATTTATGGTGAAATTCAAGTAAATTCTCATCTATCTGGTCTTCCTGATTTGACACTCTCATTTACAAACCCTTCAATTCTTGATGATGTGAGATTCCATCCCTGTGTTCGGTTTCGCCCATGGGAATCACATCAGATCCTATCATTTGTGCCTCCTGATGGGCAGTTTAAGCTCATGAGTTACAGGGTTAGAAAGTTGAAGAATACTCCTGTATATGTAAAGCCTCAGTTTACATCAGATGCTGGGACGTGCCGGGTCAGTGTGTTAGTAGGAATTCGACATGATCCTGGAAAGCCGATTGACTCAATCGATGTGCAGTTTCAGTTGCCCTCGTGCGTTTTATCAGCTGACCTTACTTCAAATTATGGAACAGTGAACATCCTATCTAATAAGATGTGTTCTTGGACAATTGGAAAGATGCCAAAAGATAAGACCCCTTCAATGTCTGGAACATTAACACTCGAGACAGGATTACAACAGCTTCATATATTTCCAACATTTCAAGTACGTTTTAAGATCATGGGTGTAGTTCTCTCTGCCCTGCAAGTAGATAAACTCGACGTGAAGAACTTGCCGAATCACCCTTACAAAGGCTTTCGAGCTCTAACACGAGCTGGGAAGTTCGAAGTTCGGTCATAA

Protein sequence

MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQVVREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDNGFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNEVNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVRFRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPGKPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETGLQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS

Homology

[Close]

BLAST of Carg27420 vs. NCBI nr
Match: XP_022961479.1 (AP-3 complex subunit mu isoform X1 [Cucurbita moschata])

HSP 1 Score: 850.1 bits (2195), Expect = 3.1e-243
Identity = 414/415 (99.76%), Postives = 415/415 (100.00%), Query Frame = 0


Query: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60
           MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV
Sbjct: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60

Query: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
           VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN
Sbjct: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120

Query: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180
           GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE
Sbjct: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180

Query: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
           VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR
Sbjct: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240

Query: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300
           FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG
Sbjct: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300

Query: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360
           KPIDSIDVQFQLPSC+LSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG
Sbjct: 301 KPIDSIDVQFQLPSCILSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360

Query: 361 LQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 416
           LQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS
Sbjct: 361 LQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 415

[Close]

BLAST of Carg27420 vs. NCBI nr
Match: XP_023515689.1 (AP-3 complex subunit mu isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 847.0 bits (2187), Expect = 2.6e-242
Identity = 413/415 (99.52%), Postives = 414/415 (99.76%), Query Frame = 0


Query: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60
           MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV
Sbjct: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60

Query: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
           VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN
Sbjct: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120

Query: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180
           GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE
Sbjct: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180

Query: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
           VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR
Sbjct: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240

Query: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300
           FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAG CRVSVLVGIRHDPG
Sbjct: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGMCRVSVLVGIRHDPG 300

Query: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360
           KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG
Sbjct: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360

Query: 361 LQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 416
           LQQLHIFPTFQVRFKIMG+VLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS
Sbjct: 361 LQQLHIFPTFQVRFKIMGLVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 415

[Close]

BLAST of Carg27420 vs. NCBI nr
Match: XP_022961480.1 (AP-3 complex subunit mu isoform X2 [Cucurbita moschata])

HSP 1 Score: 841.3 bits (2172), Expect = 1.4e-240
Identity = 412/415 (99.28%), Postives = 413/415 (99.52%), Query Frame = 0


Query: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60
           MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFK  PVIASPTHYLFQV
Sbjct: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFK--PVIASPTHYLFQV 60

Query: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
           VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN
Sbjct: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120

Query: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180
           GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE
Sbjct: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180

Query: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
           VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR
Sbjct: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240

Query: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300
           FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG
Sbjct: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300

Query: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360
           KPIDSIDVQFQLPSC+LSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG
Sbjct: 301 KPIDSIDVQFQLPSCILSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360

Query: 361 LQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 416
           LQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS
Sbjct: 361 LQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 413

[Close]

BLAST of Carg27420 vs. NCBI nr
Match: XP_022968735.1 (AP-3 complex subunit mu isoform X1 [Cucurbita maxima])

HSP 1 Score: 841.3 bits (2172), Expect = 1.4e-240
Identity = 409/415 (98.55%), Postives = 412/415 (99.28%), Query Frame = 0


Query: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60
           MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV
Sbjct: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60

Query: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
           VR+GITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN
Sbjct: 61  VRDGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120

Query: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180
           GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWR+TDPKYAKNE
Sbjct: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRSTDPKYAKNE 180

Query: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
           VNV+LVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSF NPSILDDVRFHPCVR
Sbjct: 181 VNVELVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFANPSILDDVRFHPCVR 240

Query: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300
           FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG
Sbjct: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300

Query: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360
           KPIDSIDVQFQLPSCVLS DLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG
Sbjct: 301 KPIDSIDVQFQLPSCVLSVDLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360

Query: 361 LQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 416
           LQQLHIFPTFQVRFKIMGVVLS LQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS
Sbjct: 361 LQQLHIFPTFQVRFKIMGVVLSGLQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 415

[Close]

BLAST of Carg27420 vs. NCBI nr
Match: XP_023515690.1 (AP-3 complex subunit mu isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 838.2 bits (2164), Expect = 1.2e-239
Identity = 411/415 (99.04%), Postives = 412/415 (99.28%), Query Frame = 0


Query: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60
           MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFK  PVIASPTHYLFQV
Sbjct: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFK--PVIASPTHYLFQV 60

Query: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
           VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN
Sbjct: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120

Query: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180
           GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE
Sbjct: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180

Query: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
           VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR
Sbjct: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240

Query: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300
           FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAG CRVSVLVGIRHDPG
Sbjct: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGMCRVSVLVGIRHDPG 300

Query: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360
           KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG
Sbjct: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360

Query: 361 LQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 416
           LQQLHIFPTFQVRFKIMG+VLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS
Sbjct: 361 LQQLHIFPTFQVRFKIMGLVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 413

[Close]

BLAST of Carg27420 vs. TAIR10
Match: AT1G56590.1 (Clathrin adaptor complexes medium subunit family protein)

HSP 1 Score: 702.6 bits (1812), Expect = 1.5e-202
Identity = 325/414 (78.50%), Postives = 377/414 (91.06%), Query Frame = 0


Query: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60
           MLQCIFL+SDSGE+MLEKQLTGHRVDRSICAWFW+Q +SQGDSFK  PVIASPTHYLFQ+
Sbjct: 1   MLQCIFLISDSGEVMLEKQLTGHRVDRSICAWFWDQYISQGDSFKALPVIASPTHYLFQI 60

Query: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
           VR+GITFLAC+QVEMPPLM IEFLCRVADVL++YLG LNEDL+KDNF+IVYELLDEMIDN
Sbjct: 61  VRDGITFLACSQVEMPPLMAIEFLCRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMIDN 120

Query: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180
           GFPLTTEP+IL+E+IAPPNLVSK+LSVVTGN+SNVSDT+P    S VPWR TDPKY+ NE
Sbjct: 121 GFPLTTEPSILKEMIAPPNLVSKMLSVVTGNASNVSDTLPSGAGSCVPWRPTDPKYSSNE 180

Query: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
           V VDLVEEMDAI+NRDG LVKCEIYGE+Q+NS L+G PDLTLSF NPSIL+D+RFHPCVR
Sbjct: 181 VYVDLVEEMDAIVNRDGELVKCEIYGEVQMNSQLTGFPDLTLSFANPSILEDMRFHPCVR 240

Query: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300
           +RPWESHQ+LSFVPPDG+FKLMSYRV+KLKNTPVYVKPQ TSD+GTCR+SVLVGIR DPG
Sbjct: 241 YRPWESHQVLSFVPPDGEFKLMSYRVKKLKNTPVYVKPQITSDSGTCRISVLVGIRSDPG 300

Query: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360
           K I+SI + FQLP CV SADL+SN+GTV ILSNK C+WTIG++PKDKTP +SGTL LE G
Sbjct: 301 KTIESITLSFQLPHCVSSADLSSNHGTVTILSNKTCTWTIGRIPKDKTPCLSGTLALEPG 360

Query: 361 LQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVR 415
           L++LH+FPTF++ FKIMG+ LS L+++KLD++ +P   YKGFRA TRAG+F+VR
Sbjct: 361 LERLHVFPTFKLGFKIMGIALSGLRIEKLDLQTIPPRLYKGFRAQTRAGEFDVR 414

[Close]

BLAST of Carg27420 vs. TAIR10
Match: AT1G10730.1 (Clathrin adaptor complexes medium subunit family protein)

HSP 1 Score: 169.9 bits (429), Expect = 3.4e-42
Identity = 118/435 (27.13%), Postives = 209/435 (48.05%), Query Frame = 0


Query: 5   IFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPV-IASPTHYLFQVVRE 64
           +FLL   G +++ +   G         +F +   ++GDS    PV   +   Y+F V   
Sbjct: 8   LFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYDNGVTYMF-VQHS 67

Query: 65  GITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDNGFP 124
            I  +  ++        + FL RV DV   Y  EL E+ ++DNFV+VYELLDEM+D G+P
Sbjct: 68  NIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYP 127

Query: 125 LTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNEVNV 184
             TE  IL E I                   V+   P A+ + V WR+   K+ KNEV +
Sbjct: 128 QFTEARILSEFIK-----------TDAYRMEVTQRPPMAVTNSVSWRSEGLKFKKNEVFL 187

Query: 185 DLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSI-------------- 244
           D++E ++ ++N +G +V+ ++ G +++ ++LSG+P+  L   +  +              
Sbjct: 188 DVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRAIKGKAID 247

Query: 245 LDDVRFHPCVRFRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRV 304
           L+D++FH CVR   +E+ + +SF+PPDG F LM+YR+       ++V+      + + RV
Sbjct: 248 LEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEAHIERHSRS-RV 307

Query: 305 SVLVGIRHD--PGKPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNK-MCSWTIGKMPKD 364
            +LV  R          S++++  +P+   + D+ ++ G+      K    W I     +
Sbjct: 308 EMLVKARSQFKDRSYATSVEIELPVPTDAYNPDVRTSLGSAAYAPEKDALVWKIQYFYGN 367

Query: 365 KTPSMSGTLTLETGLQQLHIFP----TFQVRFKIMGVVLSALQVDKLDV---KNLPNHPY 415
           K  ++     L + +      P      +V+F+I   ++S +QV  L +        HP+
Sbjct: 368 KEHTLKADFHLPS-IAAEEATPERKAPIRVKFEIPKFIVSGIQVRYLKIIEKSGYQAHPW 426

[Close]

BLAST of Carg27420 vs. TAIR10
Match: AT1G60780.1 (Clathrin adaptor complexes medium subunit family protein)

HSP 1 Score: 167.9 bits (424), Expect = 1.3e-41
Identity = 116/436 (26.61%), Postives = 210/436 (48.17%), Query Frame = 0


Query: 5   IFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPV-IASPTHYLFQVVRE 64
           +FLL   G +++ +   G         +F +    +GDS    PV   +   Y+F V   
Sbjct: 8   LFLLDIKGRVLVWRDYRGDVSAAQAERFFTKLIEKEGDSQSNDPVAYDNGVTYMF-VQHS 67

Query: 65  GITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDNGFP 124
            +  +  ++        + FL RV DV   Y  EL E+ ++DNFV+VYELLDEM+D G+P
Sbjct: 68  NVYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFGYP 127

Query: 125 LTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNEVNV 184
             TE  IL E I                   V+   P A+ + V WR+   +Y KNEV +
Sbjct: 128 QYTEARILSEFIK-----------TDAYRMEVTQRPPMAVTNAVSWRSEGIQYKKNEVFL 187

Query: 185 DLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSI-------------- 244
           D++E ++ ++N +G +V+ ++ G +++ ++L+G+P+  L   +  +              
Sbjct: 188 DVIENVNILVNSNGQIVRSDVVGALKMRTYLTGMPECKLGLNDRVLLEAQGRATKGKAID 247

Query: 245 LDDVRFHPCVRFRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRV 304
           L+D++FH CVR   +E+ + +SF+PPDG F LM+YR+       ++V+ Q  S + + RV
Sbjct: 248 LEDIKFHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIWVEAQIESHSRS-RV 307

Query: 305 SVLVGIRHD--PGKPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNK-MCSWTIGKMPKD 364
            +L+  R          +++++  +P+   +  + ++ G+ +    K    W I   P +
Sbjct: 308 EMLIKARSQFKERSTATNVEIELPVPTDASNPTVRTSLGSASYAPEKDALVWKIKSFPGN 367

Query: 365 KTPSMSG-----TLTLETGLQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKG 415
           K   +       ++T E    +       +V+F+I    +S +QV  L  K +    Y+ 
Sbjct: 368 KEYMLRAEFHLPSITAEEATPERK--APIRVKFEIPYFTVSGIQVRYL--KIIEKSGYQA 426

[Close]

BLAST of Carg27420 vs. TAIR10
Match: AT4G24550.2 (Clathrin adaptor complexes medium subunit family protein)

HSP 1 Score: 157.5 bits (397), Expect = 1.7e-38
Identity = 116/395 (29.37%), Postives = 183/395 (46.33%), Query Frame = 0


Query: 58  FQVVREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEM 117
           F V   G+ F+A T+V + P + +E L R+A V+ DYLG LNED  + NFV+VYELLDE+
Sbjct: 60  FHVKVVGLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEV 119

Query: 118 IDNGFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNV----SDTIPGAIASHVPWRTTD 177
           ID G+  TT   +L+  I    +V     +   + + +    +  +PG   +        
Sbjct: 120 IDFGYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDP 179

Query: 178 PKYAKNEVNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFT-------- 237
               + E+ VD++E++    +  G+++  EI G IQ+ S+LSG P++ L+          
Sbjct: 180 GGRRREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGRG 239

Query: 238 ------------NPSILDDVRFHPCVRFRPWESHQILSFVPPDGQFKLMSYRVRKLKNTP 297
                       +  ILDD  FH  VR   ++S + LS VPPDG+F +M+YR+ +    P
Sbjct: 240 GRSVYDYRSSSGSGVILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFKPP 299

Query: 298 VYVKPQFTSDAGTCRVSVLVGIRHDPGKPI--DSIDVQFQLPSCVLSADLTSNYGTVNIL 357
            +V      +AG  +  V++ IR +    I  ++I VQ  LP+    A      G     
Sbjct: 300 FHVN-TLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQR 359

Query: 358 -----SNKMCSWTIGKMPKDKTPSMSGTLTLETGLQQLHIFPTFQVRFKIMGVVLSALQV 415
                SNKM  W + K+      ++   LT     Q+ H   T +     M   +    V
Sbjct: 360 TDFKESNKMLEWNLKKIVGGGEHTLRAKLTFS---QEFHGNITKEAGPVSMTFTIPMYNV 419

[Close]

BLAST of Carg27420 vs. TAIR10
Match: AT5G46630.2 (Clathrin adaptor complexes medium subunit family protein)

HSP 1 Score: 144.1 bits (362), Expect = 2.0e-34
Identity = 99/342 (28.95%), Postives = 160/342 (46.78%), Query Frame = 0


Query: 80  GIEFLCRVADVLTDYL-GELNEDLVKDNFVIVYELLDEMIDNGFPLTTEPNILREIIAPP 139
           G +F+     +   Y  G  +ED +++NFV++YELLDE++D G+P    P IL+  I   
Sbjct: 81  GFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQE 140

Query: 140 NLVSKVLSVVTGNSSNVSDTIPGA---IASHVPWRTTDPKYAKNEVNVDLVEEMDAILNR 199
            + S        +S      +P A   +   V WR     Y KNEV +D+VE ++ +++ 
Sbjct: 141 GVRSPF------SSKPKDKPVPNATLQVTGAVGWRREGLAYKKNEVFLDIVESVNLLMSS 200

Query: 200 DGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSI--------------------LDDVRF 259
            G++++C++ G++ +   LSG+PDL L   N  I                    LDDV F
Sbjct: 201 KGNVLRCDVTGKVLMKCFLSGMPDLKLGL-NDKIGLEKESEMKSRPAKSGKTIELDDVTF 260

Query: 260 HPCVRFRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGI 319
           H CV    + S + +SFVPPDG+F+LM YR+ +  N P  V P    + G  R+ V V +
Sbjct: 261 HQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFRVLPTI-KELGRTRMEVNVKV 320

Query: 320 RHDPGKPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCS---WTIGKMPKDKTPSMS 379
           +   G  + ++ V  ++P    +A       T     N       W I K P     ++S
Sbjct: 321 KSVFGAKMFALGVVVKIPVPKQTAKTNFQVTTGRAKYNPSIDCLVWKIRKFPGQTESTLS 380

Query: 380 GTLTL--ETGLQQLHIFPTFQVRFKIMGVVLSALQVDKLDVK 393
             + L    G ++    P  Q+ F++     S L+V  L V+
Sbjct: 381 AEIELISTMGEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVR 414

[Close]

BLAST of Carg27420 vs. Swiss-Prot
Match: sp|F4I562|AP3M_ARATH (AP-3 complex subunit mu OS=Arabidopsis thaliana OX=3702 GN=AP3M PE=1 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 2.6e-201
Identity = 325/414 (78.50%), Postives = 377/414 (91.06%), Query Frame = 0


Query: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60
           MLQCIFL+SDSGE+MLEKQLTGHRVDRSICAWFW+Q +SQGDSFK  PVIASPTHYLFQ+
Sbjct: 1   MLQCIFLISDSGEVMLEKQLTGHRVDRSICAWFWDQYISQGDSFKALPVIASPTHYLFQI 60

Query: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
           VR+GITFLAC+QVEMPPLM IEFLCRVADVL++YLG LNEDL+KDNF+IVYELLDEMIDN
Sbjct: 61  VRDGITFLACSQVEMPPLMAIEFLCRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMIDN 120

Query: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180
           GFPLTTEP+IL+E+IAPPNLVSK+LSVVTGN+SNVSDT+P    S VPWR TDPKY+ NE
Sbjct: 121 GFPLTTEPSILKEMIAPPNLVSKMLSVVTGNASNVSDTLPSGAGSCVPWRPTDPKYSSNE 180

Query: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
           V VDLVEEMDAI+NRDG LVKCEIYGE+Q+NS L+G PDLTLSF NPSIL+D+RFHPCVR
Sbjct: 181 VYVDLVEEMDAIVNRDGELVKCEIYGEVQMNSQLTGFPDLTLSFANPSILEDMRFHPCVR 240

Query: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300
           +RPWESHQ+LSFVPPDG+FKLMSYRV+KLKNTPVYVKPQ TSD+GTCR+SVLVGIR DPG
Sbjct: 241 YRPWESHQVLSFVPPDGEFKLMSYRVKKLKNTPVYVKPQITSDSGTCRISVLVGIRSDPG 300

Query: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360
           K I+SI + FQLP CV SADL+SN+GTV ILSNK C+WTIG++PKDKTP +SGTL LE G
Sbjct: 301 KTIESITLSFQLPHCVSSADLSSNHGTVTILSNKTCTWTIGRIPKDKTPCLSGTLALEPG 360

Query: 361 LQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVR 415
           L++LH+FPTF++ FKIMG+ LS L+++KLD++ +P   YKGFRA TRAG+F+VR
Sbjct: 361 LERLHVFPTFKLGFKIMGIALSGLRIEKLDLQTIPPRLYKGFRAQTRAGEFDVR 414

[Close]

BLAST of Carg27420 vs. Swiss-Prot
Match: sp|P53677|AP3M2_HUMAN (AP-3 complex subunit mu-2 OS=Homo sapiens OX=9606 GN=AP3M2 PE=2 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 1.4e-101
Identity = 190/420 (45.24%), Postives = 265/420 (63.10%), Query Frame = 0


Query: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60
           M+  +FL++ SG+I LEK      V RS+C +F+E      ++  + PVI +P HYL  V
Sbjct: 1   MIHSLFLINSSGDIFLEKHWKS-VVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLSV 60

Query: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
            R  I F+A  Q E+PPL  IEFL RV D   DY G  +E ++KDN V+VYE+L+EM+DN
Sbjct: 61  YRHKIFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDN 120

Query: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180
           GFPL TE NIL+E+I PP ++  V++ +TG S+NV D +P    S VPWR T  KY  NE
Sbjct: 121 GFPLATESNILKELIKPPTILRTVVNTITG-STNVGDQLPTGQLSVVPWRRTGVKYTNNE 180

Query: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
              D++EE+DAI+++ G  +  EI G I     L+G+PDLTLSF NP +LDDV FHPCVR
Sbjct: 181 AYFDVIEEIDAIIDKSGSTITAEIQGVIDACVKLTGMPDLTLSFMNPRLLDDVSFHPCVR 240

Query: 241 FRPWESHQILSFVPPDGQFKLMSYRV--RKLKNTPVYVKP--QFTSDAGTCRVSVLVGIR 300
           F+ WES +ILSF+PPDG F+L+SY V  + L   PVYVK    F   +   R  + VG +
Sbjct: 241 FKRWESERILSFIPPDGNFRLLSYHVSAQNLVAIPVYVKHNISFRDSSSLGRFEITVGPK 300

Query: 301 HDPGKPIDSIDVQFQLPSCVLSADLTSNYGTVNI-LSNKMCSWTIGKMPKDKTPSMSGTL 360
              GK I+ + V  Q+P  VL+  LT + GT       KM SW +GK+   K PS+ GT+
Sbjct: 301 QTMGKTIEGVTVTSQMPKGVLNMSLTPSQGTHTFDPVTKMLSWDVGKINPQKLPSLKGTM 360

Query: 361 TLETGLQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 416
           +L+ G  +    PT  ++FKI  + +S L+V++LD+      P+KG + +T+AGKF+VR+
Sbjct: 361 SLQAGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVRT 418

[Close]

BLAST of Carg27420 vs. Swiss-Prot
Match: sp|Q9Y2T2|AP3M1_HUMAN (AP-3 complex subunit mu-1 OS=Homo sapiens OX=9606 GN=AP3M1 PE=1 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 4.0e-101
Identity = 186/420 (44.29%), Postives = 269/420 (64.05%), Query Frame = 0


Query: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60
           M+  +FL++ SG+I LEK      V +S+C +F+E      D   + PVI++P HYL  +
Sbjct: 1   MIHSLFLINCSGDIFLEKHWKS-VVSQSVCDYFFEAQEKAADVENVPPVISTPHHYLISI 60

Query: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
            R+ + F++  Q E+PPL  IEFL RVAD   DY GE +E  +KDN VIVYELL+EM+DN
Sbjct: 61  YRDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDN 120

Query: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180
           GFPL TE NIL+E+I PP ++  V++ +TG SSNV DT+P    S++PWR    KY  NE
Sbjct: 121 GFPLATESNILKELIKPPTILRSVVNSITG-SSNVGDTLPTGQLSNIPWRRAGVKYTNNE 180

Query: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
              D+VEE+DAI+++ G  V  EI G I     LSG+PDL+LSF NP +LDDV FHPC+R
Sbjct: 181 AYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRLLDDVSFHPCIR 240

Query: 241 FRPWESHQILSFVPPDGQFKLMSYRV--RKLKNTPVYVKP--QFTSDAGTCRVSVLVGIR 300
           F+ WES ++LSF+PPDG F+L+SYRV  + L   PVYVK    F  ++   R  + +G +
Sbjct: 241 FKRWESERVLSFIPPDGNFRLISYRVSSQNLVAIPVYVKHSISFKENSSCGRFDITIGPK 300

Query: 301 HDPGKPIDSIDVQFQLPSCVLSADLTSNYGTVNI-LSNKMCSWTIGKMPKDKTPSMSGTL 360
            + GK I+ I V   +P  VL+ +LT   G+       K+ +W +GK+   K PS+ G +
Sbjct: 301 QNMGKTIEGITVTVHMPKVVLNMNLTPTQGSYTFDPVTKVLTWDVGKITPQKLPSLKGLV 360

Query: 361 TLETGLQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 416
            L++G  +    P+  ++FKI  + +S L+V++LD+      P+KG + +T+AGKF+VR+
Sbjct: 361 NLQSGAPKPEENPSLNIQFKIQQLAISGLKVNRLDMYGEKYKPFKGVKYVTKAGKFQVRT 418

[Close]

BLAST of Carg27420 vs. Swiss-Prot
Match: sp|Q5R478|AP3M1_PONAB (AP-3 complex subunit mu-1 OS=Pongo abelii OX=9601 GN=AP3M1 PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 4.0e-101
Identity = 186/420 (44.29%), Postives = 269/420 (64.05%), Query Frame = 0


Query: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60
           M+  +FL++ SG+I LEK      V +S+C +F+E      D   + PVI++P HYL  +
Sbjct: 1   MIHSLFLINCSGDIFLEKHWKS-VVSQSVCDYFFEAQEKAADVENVPPVISTPHHYLISI 60

Query: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
            R+ + F++  Q E+PPL  IEFL RVAD   DY GE +E  +KDN VIVYELL+EM+DN
Sbjct: 61  YRDKLFFVSVIQTEVPPLFVIEFLHRVADTFQDYFGECSEAAIKDNVVIVYELLEEMLDN 120

Query: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180
           GFPL TE NIL+E+I PP ++  V++ +TG SSNV DT+P    S++PWR    KY  NE
Sbjct: 121 GFPLATESNILKELIKPPTILRSVVNSITG-SSNVGDTLPTGQLSNIPWRRAGVKYTNNE 180

Query: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
              D+VEE+DAI+++ G  V  EI G I     LSG+PDL+LSF NP +LDDV FHPC+R
Sbjct: 181 AYFDVVEEIDAIIDKSGSTVFAEIQGVIDACIKLSGMPDLSLSFMNPRLLDDVSFHPCIR 240

Query: 241 FRPWESHQILSFVPPDGQFKLMSYRV--RKLKNTPVYVKP--QFTSDAGTCRVSVLVGIR 300
           F+ WES ++LSF+PPDG F+L+SYRV  + L   PVYVK    F  ++   R  + +G +
Sbjct: 241 FKRWESERVLSFIPPDGNFRLISYRVSSQNLVAIPVYVKHSISFKENSSCGRFDITIGPK 300

Query: 301 HDPGKPIDSIDVQFQLPSCVLSADLTSNYGTVNI-LSNKMCSWTIGKMPKDKTPSMSGTL 360
            + GK I+ I V   +P  VL+ +LT   G+       K+ +W +GK+   K PS+ G +
Sbjct: 301 QNMGKTIEGITVTVHMPKVVLNMNLTPTQGSYTFDPVTKVLTWDVGKITPQKLPSLKGLV 360

Query: 361 TLETGLQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 416
            L++G  +    P+  ++FKI  + +S L+V++LD+      P+KG + +T+AGKF+VR+
Sbjct: 361 NLQSGAPKPEENPSLNIQFKIQQLAISGLKVNRLDMYGEKYKPFKGVKYVTKAGKFQVRT 418

[Close]

BLAST of Carg27420 vs. Swiss-Prot
Match: sp|P53678|AP3M2_RAT (AP-3 complex subunit mu-2 OS=Rattus norvegicus OX=10116 GN=Ap3m2 PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 4.0e-101
Identity = 192/420 (45.71%), Postives = 267/420 (63.57%), Query Frame = 0


Query: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60
           M+  +FL++ +G+I LEK      V RS+C +F+E      ++  + PVI +P HYL  V
Sbjct: 1   MIHSLFLINSAGDIFLEKHWKS-VVSRSVCDYFFEAQERATEAENVPPVIPTPHHYLLSV 60

Query: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
            R  I F+A  Q E+PPL  IEFL RV D   DY G  +E ++KDN V+VYE+L+EM+DN
Sbjct: 61  YRHKIFFVAVIQTEVPPLFVIEFLHRVVDTFQDYFGVCSEPVIKDNVVVVYEVLEEMLDN 120

Query: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180
           GFPL TE NIL+E+I PP ++  V++ +TG S+NV D +P    S VPWR T  KY  NE
Sbjct: 121 GFPLATESNILKELIKPPTILRTVVNTITG-STNVGDQLPTGQLSVVPWRRTGVKYTNNE 180

Query: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
              D+VEE+DAI+++ G  V  EI G I     L+G+PDLTLSF NP +LDDV FHPCVR
Sbjct: 181 AYFDVVEEIDAIIDKSGSTVTAEIQGVIDACVKLTGMPDLTLSFMNPRLLDDVSFHPCVR 240

Query: 241 FRPWESHQILSFVPPDGQFKLMSYRV--RKLKNTPVYVKPQFT-SDAGTC-RVSVLVGIR 300
           F+ WES +ILSF+PPDG F+L+SY V  + L   PVYVK   +  D+G+  R  + VG +
Sbjct: 241 FKRWESERILSFIPPDGNFRLLSYHVSAQNLVAIPVYVKHSISFRDSGSLGRFEITVGPK 300

Query: 301 HDPGKPIDSIDVQFQLPSCVLSADLTSNYGTVNI-LSNKMCSWTIGKMPKDKTPSMSGTL 360
              GK I+ + V  Q+P  VL+  LT + GT       KM SW +GK+   K PS+ GT+
Sbjct: 301 QTMGKTIEGVTVTSQMPKGVLNMSLTPSQGTHTFDPVTKMLSWDVGKINPQKLPSLKGTM 360

Query: 361 TLETGLQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 416
            L+ G  +    PT  ++FKI  + +S L+V++LD+      P+KG + +T+AGKF+VR+
Sbjct: 361 GLQVGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGEKYKPFKGIKYMTKAGKFQVRT 418

[Close]

BLAST of Carg27420 vs. TrEMBL
Match: tr|A0A0A0LVR6|A0A0A0LVR6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181320 PE=3 SV=1)

HSP 1 Score: 832.8 bits (2150), Expect = 3.4e-238
Identity = 401/415 (96.63%), Postives = 411/415 (99.04%), Query Frame = 0


Query: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60
           MLQCIFLLSDSGEIMLEKQLTGHRVDRSIC WFWEQS+SQGDSFKLQPVIASPTHYLFQV
Sbjct: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICVWFWEQSLSQGDSFKLQPVIASPTHYLFQV 60

Query: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
           +R GITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN
Sbjct: 61  IRAGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120

Query: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180
           GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDT+PGAIASHVPWRTTDPKYAKNE
Sbjct: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTVPGAIASHVPWRTTDPKYAKNE 180

Query: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
           VNVDLVEEMDAILNR+GHL+KCEIYGE+QVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR
Sbjct: 181 VNVDLVEEMDAILNRNGHLIKCEIYGEVQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240

Query: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300
           FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG
Sbjct: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300

Query: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360
           KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNK+CSWTIGK+PKDKTPSMSGTLTL TG
Sbjct: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKICSWTIGKIPKDKTPSMSGTLTLVTG 360

Query: 361 LQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 416
           LQQLH+FPTFQVRFKIMGVVLS LQVDKLDVKNLPNHPYKGFRALTRAG+FEVRS
Sbjct: 361 LQQLHVFPTFQVRFKIMGVVLSGLQVDKLDVKNLPNHPYKGFRALTRAGQFEVRS 415

[Close]

BLAST of Carg27420 vs. TrEMBL
Match: tr|A0A1S3CL68|A0A1S3CL68_CUCME (AP-3 complex subunit mu isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502231 PE=3 SV=1)

HSP 1 Score: 830.1 bits (2143), Expect = 2.2e-237
Identity = 400/415 (96.39%), Postives = 410/415 (98.80%), Query Frame = 0


Query: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60
           MLQCIFLLSDSGEIMLEKQLTGHRVDRSIC WFWEQS+SQGDSFKLQPVIASPTHYLFQV
Sbjct: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICVWFWEQSLSQGDSFKLQPVIASPTHYLFQV 60

Query: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
           VR GITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN
Sbjct: 61  VRAGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120

Query: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180
           GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDT+PGAIASHVPWRTTDPKYAKNE
Sbjct: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTVPGAIASHVPWRTTDPKYAKNE 180

Query: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
           VNVDLVEEMDAILNRDGHL+KCEIYGE+QVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR
Sbjct: 181 VNVDLVEEMDAILNRDGHLIKCEIYGEVQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240

Query: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300
           FRPWESHQILSFVPPDGQFKL+SYRVRKLKNTP+YVKPQFTSDAGTCRVSVLVGIR DPG
Sbjct: 241 FRPWESHQILSFVPPDGQFKLVSYRVRKLKNTPIYVKPQFTSDAGTCRVSVLVGIRRDPG 300

Query: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360
           KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNK+CSWTIGKMPKDKTPSMSGTLTLE+G
Sbjct: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKICSWTIGKMPKDKTPSMSGTLTLESG 360

Query: 361 LQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 416
           LQQLH+FPT QVRFKIMGVVLS LQVDKLDVKNLPNHPYKGFRALTRAG+FEVRS
Sbjct: 361 LQQLHVFPTVQVRFKIMGVVLSGLQVDKLDVKNLPNHPYKGFRALTRAGQFEVRS 415

[Close]

BLAST of Carg27420 vs. TrEMBL
Match: tr|A0A1S3CL71|A0A1S3CL71_CUCME (AP-3 complex subunit mu isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502231 PE=3 SV=1)

HSP 1 Score: 821.2 bits (2120), Expect = 1.0e-234
Identity = 398/415 (95.90%), Postives = 408/415 (98.31%), Query Frame = 0


Query: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60
           MLQCIFLLSDSGEIMLEKQLTGHRVDRSIC WFWEQS+SQGDSFK  PVIASPTHYLFQV
Sbjct: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICVWFWEQSLSQGDSFK--PVIASPTHYLFQV 60

Query: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
           VR GITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN
Sbjct: 61  VRAGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120

Query: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180
           GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDT+PGAIASHVPWRTTDPKYAKNE
Sbjct: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTVPGAIASHVPWRTTDPKYAKNE 180

Query: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
           VNVDLVEEMDAILNRDGHL+KCEIYGE+QVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR
Sbjct: 181 VNVDLVEEMDAILNRDGHLIKCEIYGEVQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240

Query: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300
           FRPWESHQILSFVPPDGQFKL+SYRVRKLKNTP+YVKPQFTSDAGTCRVSVLVGIR DPG
Sbjct: 241 FRPWESHQILSFVPPDGQFKLVSYRVRKLKNTPIYVKPQFTSDAGTCRVSVLVGIRRDPG 300

Query: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360
           KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNK+CSWTIGKMPKDKTPSMSGTLTLE+G
Sbjct: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKICSWTIGKMPKDKTPSMSGTLTLESG 360

Query: 361 LQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 416
           LQQLH+FPT QVRFKIMGVVLS LQVDKLDVKNLPNHPYKGFRALTRAG+FEVRS
Sbjct: 361 LQQLHVFPTVQVRFKIMGVVLSGLQVDKLDVKNLPNHPYKGFRALTRAGQFEVRS 413

[Close]

BLAST of Carg27420 vs. TrEMBL
Match: tr|A0A2P6R7M2|A0A2P6R7M2_ROSCH (Putative clathrin adaptor, mu subunit OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0457601 PE=3 SV=1)

HSP 1 Score: 751.9 bits (1940), Expect = 7.6e-214
Identity = 353/415 (85.06%), Postives = 392/415 (94.46%), Query Frame = 0


Query: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60
           MLQCIFLLSDSGE+MLEKQLTG RVDRSIC WFWEQ++SQGDS KLQPVIASPTHYLFQ+
Sbjct: 1   MLQCIFLLSDSGEVMLEKQLTGQRVDRSICVWFWEQAISQGDSSKLQPVIASPTHYLFQI 60

Query: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
           +REGITFLACTQVEMPPLMGIEFLCRVADVLTDYLG LNEDL+KDNFVIVYELLDEMIDN
Sbjct: 61  LREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGSLNEDLIKDNFVIVYELLDEMIDN 120

Query: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180
           GFPLTTEPNILR++IAPPNLV+K+LSVVTGNSSN+SDT+PGA +S +PWRTTDPKYA NE
Sbjct: 121 GFPLTTEPNILRDMIAPPNLVNKMLSVVTGNSSNMSDTLPGATSSLIPWRTTDPKYAHNE 180

Query: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
           V VDLVEE+D I+NRDG LVKCEIYGE+QVNSHLSG+PDLTLSF+NPSILDDVRFHPCVR
Sbjct: 181 VYVDLVEEIDTIINRDGVLVKCEIYGEVQVNSHLSGVPDLTLSFSNPSILDDVRFHPCVR 240

Query: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300
           FRPWES QILSFVPPDGQFKLMSYRVRKLK++P+YVKPQ TSDAGTCR+SV+VGIR+DPG
Sbjct: 241 FRPWESQQILSFVPPDGQFKLMSYRVRKLKSSPIYVKPQLTSDAGTCRLSVMVGIRNDPG 300

Query: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360
           K IDSI VQFQLP C+LSADLTSN+GTVNILSNK CSW+IG++PKDKTPSMSGTL LE G
Sbjct: 301 KTIDSITVQFQLPPCILSADLTSNHGTVNILSNKTCSWSIGRIPKDKTPSMSGTLVLEKG 360

Query: 361 LQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 416
           L++LH+FPTFQ  F+IMGV LS LQ+DKLD++NLPN PYKGFRALT+AG+FEVRS
Sbjct: 361 LERLHVFPTFQASFRIMGVALSGLQIDKLDLRNLPNRPYKGFRALTKAGQFEVRS 415

[Close]

BLAST of Carg27420 vs. TrEMBL
Match: tr|A0A2P4LS76|A0A2P4LS76_QUESU (Ap-3 complex subunit mu OS=Quercus suber OX=58331 GN=CFP56_51408 PE=3 SV=1)

HSP 1 Score: 750.4 bits (1936), Expect = 2.2e-213
Identity = 354/415 (85.30%), Postives = 389/415 (93.73%), Query Frame = 0


Query: 1   MLQCIFLLSDSGEIMLEKQLTGHRVDRSICAWFWEQSVSQGDSFKLQPVIASPTHYLFQV 60
           MLQCIFLLSDSGE+MLEKQLTGHRVDRSIC WFW Q++SQGDSFKLQPVIASPTHYLFQV
Sbjct: 1   MLQCIFLLSDSGEVMLEKQLTGHRVDRSICDWFWGQAISQGDSFKLQPVIASPTHYLFQV 60

Query: 61  VREGITFLACTQVEMPPLMGIEFLCRVADVLTDYLGELNEDLVKDNFVIVYELLDEMIDN 120
           VREGITFLACTQVEMPPLM IEFLCRVADVL+DYLG LNED++KDNFVIVYELLDEMIDN
Sbjct: 61  VREGITFLACTQVEMPPLMAIEFLCRVADVLSDYLGGLNEDVIKDNFVIVYELLDEMIDN 120

Query: 121 GFPLTTEPNILREIIAPPNLVSKVLSVVTGNSSNVSDTIPGAIASHVPWRTTDPKYAKNE 180
           GFPLTTEPNILRE+IA PN+VSK+LSVVTGNSSNVS+T+PGA AS VPWRT+DPKYA NE
Sbjct: 121 GFPLTTEPNILREMIAQPNIVSKMLSVVTGNSSNVSETLPGATASCVPWRTSDPKYANNE 180

Query: 181 VNVDLVEEMDAILNRDGHLVKCEIYGEIQVNSHLSGLPDLTLSFTNPSILDDVRFHPCVR 240
           V VDLVEEMDA +NRDG LVKCEIYGE+QVNSHLSGLPDL LSF NPSILDDVRFHPCVR
Sbjct: 181 VYVDLVEEMDATINRDGVLVKCEIYGEVQVNSHLSGLPDLALSFANPSILDDVRFHPCVR 240

Query: 241 FRPWESHQILSFVPPDGQFKLMSYRVRKLKNTPVYVKPQFTSDAGTCRVSVLVGIRHDPG 300
           FRPWESHQILSFVPPDGQFKLMSYRV+KLK+TP+YVKPQ TSDAGTCRV+V+VGIR+DPG
Sbjct: 241 FRPWESHQILSFVPPDGQFKLMSYRVKKLKSTPIYVKPQLTSDAGTCRVNVMVGIRNDPG 300

Query: 301 KPIDSIDVQFQLPSCVLSADLTSNYGTVNILSNKMCSWTIGKMPKDKTPSMSGTLTLETG 360
           K IDSI +QF+LP C+LSADLTSN+GTVNIL+NK CSW+IG++PKDK PSMSGT  LETG
Sbjct: 301 KTIDSITIQFKLPPCILSADLTSNHGTVNILTNKTCSWSIGRIPKDKAPSMSGTFVLETG 360

Query: 361 LQQLHIFPTFQVRFKIMGVVLSALQVDKLDVKNLPNHPYKGFRALTRAGKFEVRS 416
           L++LH+FPTFQ  F+IMGV LS LQ+DKLD+KNLPN PYKGFRALTRAG+FEVRS
Sbjct: 361 LERLHVFPTFQASFRIMGVALSGLQIDKLDLKNLPNRPYKGFRALTRAGEFEVRS 415

The following BLAST results are available for this feature:

BLAST of Carg27420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961479.1	3.1e-243	99.76	AP-3 complex subunit mu isoform X1 [Cucurbita moschata]	[more]
XP_023515689.1	2.6e-242	99.52	AP-3 complex subunit mu isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022961480.1	1.4e-240	99.28	AP-3 complex subunit mu isoform X2 [Cucurbita moschata]	[more]
XP_022968735.1	1.4e-240	98.55	AP-3 complex subunit mu isoform X1 [Cucurbita maxima]	[more]
XP_023515690.1	1.2e-239	99.04	AP-3 complex subunit mu isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg27420 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G56590.1	1.5e-202	78.50	Clathrin adaptor complexes medium subunit family protein	[more]
AT1G10730.1	3.4e-42	27.13	Clathrin adaptor complexes medium subunit family protein	[more]
AT1G60780.1	1.3e-41	26.61	Clathrin adaptor complexes medium subunit family protein	[more]
AT4G24550.2	1.7e-38	29.37	Clathrin adaptor complexes medium subunit family protein	[more]
AT5G46630.2	2.0e-34	28.95	Clathrin adaptor complexes medium subunit family protein	[more]

BLAST of Carg27420 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|F4I562\|AP3M_ARATH	2.6e-201	78.50	AP-3 complex subunit mu OS=Arabidopsis thaliana OX=3702 GN=AP3M PE=1 SV=1	[more]
sp\|P53677\|AP3M2_HUMAN	1.4e-101	45.24	AP-3 complex subunit mu-2 OS=Homo sapiens OX=9606 GN=AP3M2 PE=2 SV=1	[more]
sp\|Q9Y2T2\|AP3M1_HUMAN	4.0e-101	44.29	AP-3 complex subunit mu-1 OS=Homo sapiens OX=9606 GN=AP3M1 PE=1 SV=1	[more]
sp\|Q5R478\|AP3M1_PONAB	4.0e-101	44.29	AP-3 complex subunit mu-1 OS=Pongo abelii OX=9601 GN=AP3M1 PE=2 SV=1	[more]
sp\|P53678\|AP3M2_RAT	4.0e-101	45.71	AP-3 complex subunit mu-2 OS=Rattus norvegicus OX=10116 GN=Ap3m2 PE=2 SV=1	[more]

BLAST of Carg27420 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LVR6\|A0A0A0LVR6_CUCSA	3.4e-238	96.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181320 PE=3 SV=1	[more]
tr\|A0A1S3CL68\|A0A1S3CL68_CUCME	2.2e-237	96.39	AP-3 complex subunit mu isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502231 PE=3 ...	[more]
tr\|A0A1S3CL71\|A0A1S3CL71_CUCME	1.0e-234	95.90	AP-3 complex subunit mu isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502231 PE=3 ...	[more]
tr\|A0A2P6R7M2\|A0A2P6R7M2_ROSCH	7.6e-214	85.06	Putative clathrin adaptor, mu subunit OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr...	[more]
tr\|A0A2P4LS76\|A0A2P4LS76_QUESU	2.2e-213	85.30	Ap-3 complex subunit mu OS=Quercus suber OX=58331 GN=CFP56_51408 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0016192	vesicle-mediated transport
GO:0006886	intracellular protein transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0030131	clathrin adaptor complex

Vocabulary: **INTERPRO**
Term	Definition
IPR011012	Longin-like_dom_sf
IPR036168	AP2_Mu_C_sf
IPR028565	MHD
IPR001392	Clathrin_mu

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030131	clathrin adaptor complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg27420-RA	Carg27420-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001392	Clathrin adaptor, mu subunit	PRINTS	PR00314	CLATHRINADPT	coord: 337..348 score: 33.33 coord: 230..257 score: 50.65 coord: 100..127 score: 59.42
IPR001392	Clathrin adaptor, mu subunit	PIRSF	PIRSF005992	AP_complex_mu	coord: 1..415 e-value: 1.7E-106 score: 355.0
None	No IPR available	GENE3D	G3DSA:2.60.40.1170		coord: 168..271 e-value: 1.9E-74 score: 252.3 coord: 376..410 e-value: 1.9E-74 score: 252.3
None	No IPR available	GENE3D	G3DSA:3.30.450.60		coord: 1..142 e-value: 3.6E-42 score: 145.5
None	No IPR available	GENE3D	G3DSA:2.60.40.1170		coord: 272..375 e-value: 1.9E-74 score: 252.3 coord: 411..413 e-value: 1.9E-74 score: 252.3
None	No IPR available	PANTHER	PTHR43967:SF2	CARMINE, ISOFORM A	coord: 1..414
None	No IPR available	PANTHER	PTHR43967	FAMILY NOT NAMED	coord: 1..414
None	No IPR available	CDD	cd09252	AP-3_Mu3_Cterm	coord: 167..414 e-value: 1.22656E-111 score: 329.932
IPR028565	Mu homology domain	PFAM	PF00928	Adap_comp_sub	coord: 167..414 e-value: 4.1E-63 score: 213.1
IPR028565	Mu homology domain	PROSITE	PS51072	MHD	coord: 178..414 score: 30.664
IPR036168	AP-2 complex subunit mu, C-terminal superfamily	SUPERFAMILY	SSF49447	Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor	coord: 167..414
IPR011012	Longin-like domain superfamily	SUPERFAMILY	SSF64356	SNARE-like	coord: 1..142

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg27420	Cla010960	Watermelon (97103) v1	carwmB0740
Carg27420	ClCG01G010860	Watermelon (Charleston Gray)	carwcgB0720
Carg27420	CmaCh10G011680	Cucurbita maxima (Rimu)	carcmaB1039
Carg27420	CmoCh10G012470	Cucurbita moschata (Rifu)	carcmoB1011
Carg27420	Lsi02G011460	Bottle gourd (USVL1VR-Ls)	carlsiB680
Carg27420	Cp4.1LG18g00090	Cucurbita pepo (Zucchini)	carcpeB1046
Carg27420	Cla97C01G010610	Watermelon (97103) v2	carwmbB0778

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None