Carg27378 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCTCATATCAATTGCTGCCATGGCTATCACAATTCTATCAATCACCCACTTCCAGATACTCGCCGACAACCCCCAAAAGCCCTTCCTTACCAACGCCGATCTCATCACCAAAACCTGCAGCAGCACCCCTTACAACGACCTATGCCTATCAATCTTAGAGTCATCTCCCAACAGCAATGGCACAGATCTATATGGGCTAACAGAGATCATGTTGTATATTGCAGCTGAGAATGTGAGCCTCATACATGAACACCTAATGGAATTACAAAACAAGACAGAAATGGATACCTTCATGGATGAGTGTTTGACGGATTGCTTGGAGAGCTATCAGGACGCGACGGACCAAATCGAGGACTCGATCACAGCGCTCGAGTTCAAAGCGTATCATGATATCAAGACATGGGTAGCAGCAGCCATGAATGATGGAGCTGTGTGTGAAAATGGGTTCAAAGAGAAACCAGACCACAAGTCACCAATTGTGGAGATGTCTAAAGTTTTTGATCAGATCTGCAGCATTATTCTGGCTATGGCAAATATCTTGTCTCAGGGAAATAGGAATATGAACTCTGAGGATATATTTAATTTTTGA ATGAAGCTCATATCAATTGCTGCCATGGCTATCACAATTCTATCAATCACCCACTTCCAGATACTCGCCGACAACCCCCAAAAGCCCTTCCTTACCAACGCCGATCTCATCACCAAAACCTGCAGCAGCACCCCTTACAACGACCTATGCCTATCAATCTTAGAGTCATCTCCCAACAGCAATGGCACAGATCTATATGGGCTAACAGAGATCATGTTGTATATTGCAGCTGAGAATGTGAGCCTCATACATGAACACCTAATGGAATTACAAAACAAGACAGAAATGGATACCTTCATGGATGAGTGTTTGACGGATTGCTTGGAGAGCTATCAGGACGCGACGGACCAAATCGAGGACTCGATCACAGCGCTCGAGTTCAAAGCGTATCATGATATCAAGACATGGGTAGCAGCAGCCATGAATGATGGAGCTGTGTGTGAAAATGGGTTCAAAGAGAAACCAGACCACAAGTCACCAATTGTGGAGATGTCTAAAGTTTTTGATCAGATCTGCAGCATTATTCTGGCTATGGCAAATATCTTGTCTCAGGGAAATAGGAATATGAACTCTGAGGATATATTTAATTTTTGA ATGAAGCTCATATCAATTGCTGCCATGGCTATCACAATTCTATCAATCACCCACTTCCAGATACTCGCCGACAACCCCCAAAAGCCCTTCCTTACCAACGCCGATCTCATCACCAAAACCTGCAGCAGCACCCCTTACAACGACCTATGCCTATCAATCTTAGAGTCATCTCCCAACAGCAATGGCACAGATCTATATGGGCTAACAGAGATCATGTTGTATATTGCAGCTGAGAATGTGAGCCTCATACATGAACACCTAATGGAATTACAAAACAAGACAGAAATGGATACCTTCATGGATGAGTGTTTGACGGATTGCTTGGAGAGCTATCAGGACGCGACGGACCAAATCGAGGACTCGATCACAGCGCTCGAGTTCAAAGCGTATCATGATATCAAGACATGGGTAGCAGCAGCCATGAATGATGGAGCTGTGTGTGAAAATGGGTTCAAAGAGAAACCAGACCACAAGTCACCAATTGTGGAGATGTCTAAAGTTTTTGATCAGATCTGCAGCATTATTCTGGCTATGGCAAATATCTTGTCTCAGGGAAATAGGAATATGAACTCTGAGGATATATTTAATTTTTGA MKLISIAAMAITILSITHFQILADNPQKPFLTNADLITKTCSSTPYNDLCLSILESSPNSNGTDLYGLTEIMLYIAAENVSLIHEHLMELQNKTEMDTFMDECLTDCLESYQDATDQIEDSITALEFKAYHDIKTWVAAAMNDGAVCENGFKEKPDHKSPIVEMSKVFDQICSIILAMANILSQGNRNMNSEDIFNF
BLAST of Carg27378 vs. NCBI nr
Match: XP_022961546.1 (pectinesterase inhibitor-like [Cucurbita moschata]) HSP 1 Score: 390.6 bits (1002), Expect = 3.2e-105 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Carg27378 vs. NCBI nr
Match: XP_023515956.1 (pectinesterase inhibitor-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 388.7 bits (997), Expect = 1.2e-104 Identity = 196/197 (99.49%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of Carg27378 vs. NCBI nr
Match: XP_022968792.1 (pectinesterase inhibitor-like [Cucurbita maxima]) HSP 1 Score: 384.4 bits (986), Expect = 2.3e-103 Identity = 192/197 (97.46%), Postives = 195/197 (98.98%), Query Frame = 0
BLAST of Carg27378 vs. NCBI nr
Match: XP_011659828.1 (PREDICTED: putative invertase inhibitor [Cucumis sativus] >KGN66046.1 hypothetical protein Csa_1G569235 [Cucumis sativus]) HSP 1 Score: 232.3 bits (591), Expect = 1.5e-57 Identity = 114/189 (60.32%), Postives = 154/189 (81.48%), Query Frame = 0
BLAST of Carg27378 vs. NCBI nr
Match: XP_022970023.1 (pectinesterase inhibitor 7-like [Cucurbita maxima]) HSP 1 Score: 217.2 bits (552), Expect = 4.9e-53 Identity = 108/191 (56.54%), Postives = 145/191 (75.92%), Query Frame = 0
BLAST of Carg27378 vs. TAIR10
Match: AT3G47670.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 70.5 bits (171), Expect = 1.3e-12 Identity = 56/193 (29.02%), Postives = 95/193 (49.22%), Query Frame = 0
BLAST of Carg27378 vs. TAIR10
Match: AT5G38610.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 69.7 bits (169), Expect = 2.3e-12 Identity = 51/172 (29.65%), Postives = 84/172 (48.84%), Query Frame = 0
BLAST of Carg27378 vs. TAIR10
Match: AT4G02250.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 62.4 bits (150), Expect = 3.6e-10 Identity = 34/134 (25.37%), Postives = 67/134 (50.00%), Query Frame = 0
BLAST of Carg27378 vs. TAIR10
Match: AT1G70720.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 57.4 bits (137), Expect = 1.2e-08 Identity = 48/185 (25.95%), Postives = 81/185 (43.78%), Query Frame = 0
BLAST of Carg27378 vs. TAIR10
Match: AT5G46940.1 (Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 57.0 bits (136), Expect = 1.5e-08 Identity = 46/174 (26.44%), Postives = 84/174 (48.28%), Query Frame = 0
BLAST of Carg27378 vs. Swiss-Prot
Match: sp|Q8GT41|PLA1_PLAAC (Putative invertase inhibitor OS=Platanus acerifolia OX=140101 PE=1 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 3.3e-13 Identity = 46/156 (29.49%), Postives = 81/156 (51.92%), Query Frame = 0
BLAST of Carg27378 vs. Swiss-Prot
Match: sp|O49298|PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana OX=3702 GN=PME6 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.0e-06 Identity = 34/125 (27.20%), Postives = 62/125 (49.60%), Query Frame = 0
BLAST of Carg27378 vs. TrEMBL
Match: tr|A0A0A0M1H8|A0A0A0M1H8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569235 PE=4 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 9.6e-58 Identity = 114/189 (60.32%), Postives = 154/189 (81.48%), Query Frame = 0
BLAST of Carg27378 vs. TrEMBL
Match: tr|A0A1S3BQL1|A0A1S3BQL1_CUCME (putative invertase inhibitor OS=Cucumis melo OX=3656 GN=LOC103492143 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 9.4e-45 Identity = 96/154 (62.34%), Postives = 122/154 (79.22%), Query Frame = 0
BLAST of Carg27378 vs. TrEMBL
Match: tr|A0A200PWM0|A0A200PWM0_9MAGN (Pectinesterase inhibitor domain OS=Macleaya cordata OX=56857 GN=BVC80_9091g128 PE=4 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 3.8e-30 Identity = 68/152 (44.74%), Postives = 95/152 (62.50%), Query Frame = 0
BLAST of Carg27378 vs. TrEMBL
Match: tr|B9RFD8|B9RFD8_RICCO (Pectinesterase inhibitor, putative OS=Ricinus communis OX=3988 GN=RCOM_1433910 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.1e-29 Identity = 68/151 (45.03%), Postives = 103/151 (68.21%), Query Frame = 0
BLAST of Carg27378 vs. TrEMBL
Match: tr|A0A2H5PQ01|A0A2H5PQ01_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_156750 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 1.2e-28 Identity = 70/158 (44.30%), Postives = 103/158 (65.19%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|